mRNA_5069 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A835ZHC4_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC4_9STRA) HSP 1 Score: 665 bits (1715), Expect = 9.320e-242 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1 Query: 1 MTTETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENEKFKRKPSTPRTSKKNEG 963 MTTETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENEKFKRKPSTPRTSKKNEG Sbjct: 1 MTTETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENEKFKRKPSTPRTSKKNEG 321
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A835Z0B8_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0B8_9STRA) HSP 1 Score: 545 bits (1404), Expect = 2.020e-194 Identity = 255/311 (81.99%), Postives = 282/311 (90.68%), Query Frame = 1 Query: 19 PFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENEKFKRKPSTPRTSK 951 PFCG+DSIIERLTA+R P+TM +I ESDVATLCA A++AFL PMLLE+ PVKI GDIHGQY DLLRLFEY +YPP + YLFLGDYVDRGKQS+EVICLLFAYRLKYP++FFILRGNHECSSIN++YGF+DECKRRYSV+LYKKFI CF+CMPVSA+VG RVLCMHGGLSP LDSLDS+R+LRRPTP+PDEGL CDLLWSDPEPGT GWGPNDRGVSYTFG DIVDE+T K DIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGG+M VS LLCSFQILQPQ+N KFK++ STPR +K Sbjct: 6 PFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLAGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSPDLLCSFQILQPQDNTKFKKRASTPRKAK 316
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A1Y1XTF3_9FUNG (Serine/threonine-protein phosphatase n=3 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XTF3_9FUNG) HSP 1 Score: 455 bits (1170), Expect = 1.410e-158 Identity = 205/294 (69.73%), Postives = 243/294 (82.65%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 VDSII+RL VR C P V +AE ++ LC TARE F+ P LLE+ P+KICGDIHGQY DLLRLFEYG +PP ++YLFLGDYVDRGKQSLE ICLL AY++KYPE FFILRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+PV+AV+ ++LCMHGG+SP L +++ VR + RPT +PD GL+CDLLWSDP+ +GW NDRGVSYTFG DIV ++ QK D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAG MMSV L+CSFQIL+P E + Sbjct: 9 VDSIIDRLLEVRGCRPGKQVQLAEHEIRWLCTTAREVFMSQPTLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAVIDEKILCMHGGISPDLQNMEQVRRIMRPTDVPDSGLLCDLLWSDPDKDINGWSENDRGVSYTFGGDIVGKFLQKHDMDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A1Y1IVC2_KLENI (Serine/threonine-protein phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVC2_KLENI) HSP 1 Score: 454 bits (1167), Expect = 2.820e-158 Identity = 204/294 (69.39%), Postives = 247/294 (84.01%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 VD II RL VR+ P V ++E+++ +LC T+RE FL+ P+LLE+ P+KICGDIHGQYSDLLRLFEYG +PP ++YLFLGDYVDRGKQSLE ICLL AY++KYPE FF+LRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+PV+A++ ++LCMHGGLSP L SLD ++++ RPT +PD GL+CDLLW+DP+ GWG NDRGVSYTFG+D V E+ QK D+DLICRAHQVVEDGYEFFAKR+LVTIFSAPNYCGEFDNAG MMSV L+CSFQIL+P E + Sbjct: 6 VDDIINRLLDVRTGRPGKQVQLSEAEIRSLCMTSREIFLQQPVLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPELRSLDQIKKIARPTDVPDAGLLCDLLWADPDKEVQGWGDNDRGVSYTFGSDTVQEFLQKQDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 299
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=PP12_SCHPO) HSP 1 Score: 453 bits (1166), Expect = 4.150e-158 Identity = 205/292 (70.21%), Postives = 244/292 (83.56%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQE 906 +D+IIE+L R+ P+ V ++++++ LC T+R FL PMLLE+ P+KICGDIHGQYSDLLRLFEYG YPP ++YLFLGDYVDRGKQSLEVICLLFAY++KYPE FF+LRGNHE +SINRIYGFYDECKRRYS+ L+K F DCFNCMPV+AV+ ++ CMHGGLSP L+SLD ++ + RPT IPD GL+CDL+WSDPE +GWG NDRGVSYTFG D+V + QK D+DLICRAHQVVEDGYEFF KR+LVTIFSAPNYCGEFDN G MMSV+ LLCSFQIL+P E Sbjct: 5 IDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDGYEFFGKRQLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQILKPAE 296
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: T1K2I3_TETUR (Serine/threonine-protein phosphatase n=13 Tax=Arthropoda TaxID=6656 RepID=T1K2I3_TETUR) HSP 1 Score: 451 bits (1161), Expect = 2.660e-157 Identity = 200/294 (68.03%), Postives = 243/294 (82.65%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 VDSII RL VR C P V +AE++V LC +RE FL P+LLE+ P+KICGDIHGQY+DLLRLFEYG +PP ++YLFLGDYVDRGKQSLE ICLL AY++KYPE FF+LRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+P++A++ ++ C HGGLSP L S++ +R + RPT +PD GL+CDLLWSDP+ SGWG NDRGVS+TFG D+V ++ + D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAGGMMSV L+CSFQIL+P E + Sbjct: 8 VDSIIHRLLEVRGCRPGKTVQLAEAEVRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVSGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A1Y2CUL7_9FUNG (Serine/threonine-protein phosphatase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CUL7_9FUNG) HSP 1 Score: 451 bits (1161), Expect = 3.660e-157 Identity = 203/294 (69.05%), Postives = 243/294 (82.65%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 +DS+IERL VR P V +AE ++ LC AR+ F+ P+LLE+ P+KICGD+HGQY DLLRLFEYG +PP S+YLFLGDYVDRGKQSLE ICLL AY++KYPE FFILRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+PV A++ ++LCMHGGLSP L+SL+ +R + RPT IPD GL+CDLLWSDP+ TSGWG NDRGVS+TFG D+V + +K D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAG MMSV L+CSFQIL+P E + Sbjct: 14 IDSVIERLLEVRGSRPGKQVMLAEHEIRYLCTKARDIFISQPILLELEAPIKICGDVHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVCALIDEKILCMHGGLSPDLNSLEQIRRVMRPTDIPDTGLLCDLLWSDPDKETSGWGENDRGVSFTFGPDVVTRFLEKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMSVDDTLMCSFQILKPAEKK 307
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A6J2X7Q3_SITOR (Serine/threonine-protein phosphatase n=10 Tax=Protostomia TaxID=33317 RepID=A0A6J2X7Q3_SITOR) HSP 1 Score: 451 bits (1159), Expect = 5.550e-157 Identity = 203/314 (64.65%), Postives = 252/314 (80.25%), Query Frame = 1 Query: 19 PFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE-KFKR------KPSTP 939 P VDS+I+RL VR C P V++ E++V LC +RE FL+ P+LLE+ P+KICGDIHGQY+DLLRLFEYG +PP ++YLFLGDYVDRGKQSLE ICLL AY++KYPE FF+LRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+P+SA++ ++ C HGGLSP L ++ +R + RPT +PD GL+CDLLWSDP+ GWG NDRGVS+TFG D+V ++ + D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAGGMMSV L+CSFQIL+P E + K++ +PSTP Sbjct: 4 PELNVDSLIQRLLEVRGCRPGKSVHMTEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPISAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQGVNSGRPSTP 317
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: UPI0014559838 (serine/threonine-protein phosphatase PP1-beta catalytic subunit n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559838) HSP 1 Score: 451 bits (1159), Expect = 5.960e-157 Identity = 199/294 (67.69%), Postives = 244/294 (82.99%), Query Frame = 1 Query: 31 VDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 +D++I RL VR C P VN+ ES+V LC +RE FL P+LLE+ P+KICGDIHGQ++DLLRLFEYG +PP S+YLFLGDYVDRGKQSLE ICLL AY++KYPE FF+LRGNHEC+SINRIYGFYDECKRRY+V L+K F DCFNC+P++A++ ++ C HGGLSP L S++ +R + RPT +P+ GL+CDLLWSDP+ T+GWG NDRGVS+TFG D+V ++ K D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAGGMMSV L+CSFQIL+P E + Sbjct: 12 IDTVITRLLEVRGCKPGKTVNLTESEVRGLCLKSRELFLSQPILLELEAPLKICGDIHGQFTDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPETGLLCDLLWSDPDKDTTGWGENDRGVSFTFGGDVVSKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 305
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Match: A0A3P3YIG6_PLABS (Serine/threonine-protein phosphatase n=2 Tax=Plasmodiophoridae TaxID=37358 RepID=A0A3P3YIG6_PLABS) HSP 1 Score: 451 bits (1159), Expect = 7.380e-157 Identity = 208/304 (68.42%), Postives = 242/304 (79.61%), Query Frame = 1 Query: 1 MTTETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENE 912 M T S VDSIIERL VR C P V + ES++ LC RE F+ P+LLE+ P+KI GDIHGQY DLLRLFEYG +PP ++YLFLGDYVDRGKQSLE ICLL AY++KYPE FFILRGNHEC+SINRIYGFYDECKRRY++ L+K F DCFNC+PV+AVV ++ C HGGLSP L S + VR + RPT +PD GL+CDLLWSDPE SGWG NDRGVSYTFG D+V ++ +K D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAG MMSV L+CSFQIL+P E + Sbjct: 1 MATTPSSELDVDSIIERLLEVRGCRPGKQVTLTESEIRGLCNRCREIFISQPILLELEAPIKIVGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAVVDEKIFCTHGGLSPELKSFEQVRRIMRPTDVPDTGLLCDLLWSDPEKDISGWGENDRGVSYTFGPDVVSKFLKKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMSVDDTLMCSFQILKPAEKK 304 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174783 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5069 ID=mRNA_5069|Name=jgi.p|Trimin1|174783|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=966bp|location=Sequence derived from alignment at Contig_117:236475..237440- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGACTGAAACGTCGCCATTTTGTGGTGTGGACTCGATCATCGAACGback to top protein sequence of jgi.p|Trimin1|174783 >Trimin1|174783|e_gw1.117.56.1 ID=Trimin1|174783|e_gw1.117.56.1|Name=jgi.p|Trimin1|174783|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=322bp MTTETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLEback to top mRNA from alignment at Contig_117:236475..237440- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5069 ID=mRNA_5069|Name=jgi.p|Trimin1|174783|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=966bp|location=Sequence derived from alignment at Contig_117:236475..237440- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_117:236475..237440- >mRNA_5069 ID=mRNA_5069|Name=jgi.p|Trimin1|174783|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=966bp|location=Sequence derived from alignment at Contig_117:236475..237440- (Tribonema minus UTEX_B_3156 )back to top |