mRNA_5054 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|174751
Unique NamemRNA_5054
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A835ZCN1_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN1_9STRA)

HSP 1 Score: 500 bits (1288), Expect = 4.380e-179
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
Query:    1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK 747
            MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK
Sbjct:    1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK 249          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A835YZ34_9STRA (Caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ34_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 5.950e-136
Identity = 191/249 (76.71%), Postives = 219/249 (87.95%), Query Frame = 1
Query:    1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK 747
            M +S+ALCIGINYGKTANALQGCVNDA NL KLL  SGAVA EDITVLCEPTGEE+CNAIS LA+LS SQ+L+Y FISYSGHGTQ+KD TGDE DG+DEAICP+DF ++GVITDDLLKSLLQ+FN  TTVCFLADACHSGS+LD+NR YTS++CTLSGDA LPGKIAYISGCRD QTSADA+DQDSR + G MT A IK+QK++  T  DVF LVA M+KLLRA GY+QIPVL++SFDIPR F+FIP++
Sbjct:    1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHR 249          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A835Z623_9STRA (Peptidase C14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z623_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 1.180e-135
Identity = 188/248 (75.81%), Postives = 218/248 (87.90%), Query Frame = 1
Query:    1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPY 744
            M +S+ALCIGINYGKTANALQGCVNDA NL KLL  SGAVA EDITVLCEPTGE++CNAIS LA+LS SQ+L+Y+FISYSGHGTQ+KD TGDE DG+DEAICP+DF  +GVITDDLLKSLLQ+FN  TTVCFLADACHSGS+LD+NR YTS++CTLSG+A LPGKIAYISGCRD QTSADA+DQDSR + G MT A IK+ K++  T  DVF LVA+M+KLLRA GY+QIPVL++SFDIPR F+FIP+
Sbjct:    1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 248          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A836CI31_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI31_9STRA)

HSP 1 Score: 290 bits (741), Expect = 9.390e-96
Identity = 145/247 (58.70%), Postives = 178/247 (72.06%), Query Frame = 1
Query:    4 SRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPY 744
            ++SRALCIGINY  +++ALQGC+NDA NLS LL+ SGAVA  +I +LCE T  ++   +++LA       L Y FISYSGHGTQV D+  DE DG+DE ICPSDF   GVITDD+LK  + +F   TTVCFL DACHSGS+LD+N  Y + I T+SG   L  K+  ISGCRD QTSADA+DQ S  Y G MT A +KS K   A RTDV +LVAEMRK+LRA G++Q PVL+ SF +PR F+FIPY
Sbjct:    3 TKSRALCIGINYTGSSSALQGCINDAKNLSALLNASGAVASANIQLLCEATAAQIHEGLTNLAQKCKDDKLTYAFISYSGHGTQVADLNKDETDGKDECICPSDFTKSGVITDDMLKDRIAQFPSWTTVCFLCDACHSGSMLDLNHTYVNSIDTVSGTNSLACKVVMISGCRDNQTSADAFDQSSSAYTGAMTSAMLKSLKNVFACRTDVIRLVAEMRKVLRAGGFSQYPVLSTSFTLPRQFAFIPY 249          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A836CKL4_9STRA (Putative caspase-1, p20 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 4.060e-60
Identity = 113/245 (46.12%), Postives = 151/245 (61.63%), Query Frame = 1
Query:   10 SRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGK-IAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIP 741
            SRAL +  NY  T   L+GC ND + L   L  SGAV    + VL E +  +   A+  LA  S  + L YVFI+YSGHGTQV+D  GDEADG DEAICP D    GV++DDLL+ +   F   T+V F+ DACHSGS+LD+   Y  + C  +G A   G+ +  ISGCRD QTSADA+   ++ Y G +T   ++S +  P  R DVF+LV E  + L+  G+ Q+PVL++SF IPR  +F+P
Sbjct:    3 SRALLLCNNYVGTDAELRGCHNDGDCLKAALVSSGAVPEGRVRVLREASAADAVAALEDLARRSREERLAYVFIAYSGHGTQVRDADGDEADGLDEAICPGDVETAGVVSDDLLRRVFAGFYYRTSVVFVCDACHSGSMLDLRFSYDGRRCADAGAASDVGRRVLMISGCRDSQTSADAFLGGTQ-YGGALTDCLLRSLRDVPEARGDVFRLVHETCRRLKEGGFDQVPVLSSSFLIPRRHAFMP 246          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A835XKF2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKF2_9CHLO)

HSP 1 Score: 166 bits (419), Expect = 1.200e-46
Identity = 99/259 (38.22%), Postives = 146/259 (56.37%), Query Frame = 1
Query:    7 RSRALCIGINYGKT-ANALQGCVNDANNLSK-LLDGSGAVAMEDITVLCEPTGEELCNA------ISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTL-SGDAELPGKIAYISGCRDPQTSADAYDQDS-RTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDI--PRAFSFIPYK 747
            R+RAL  G+NY    ++ALQGC+ND  N+   L++  GA  + D+       G    +A      +S LA L+  ++L +V+I YSGHGT+V D + DE DG DE + PSD+   GVI DD L  L ++FN  T V  + D+CHSG+++D+   +  + CT+ + ++ +   I  +SGC D QTSADAY+ D  R Y G MT   +   +   A   D F LV  MR  LR Q + Q P L +SF +  P + + +P +
Sbjct:   28 RARALLFGLNYAHMPSSALQGCINDVQNMKAYLMNRLGAELVCDVATDDTAAGRTATSAMGMTRKLSELAVLTYKEDLEFVWIHYSGHGTRVVDRSKDELDGYDECLVPSDYTTAGVIPDDYLAKLFEQFNPKTRVIAVFDSCHSGTVVDLKYSWEGRACTMENSNSRVRAPIMALSGCLDSQTSADAYNVDGQRQYTGAMTSVMLHVLQTTGAAADDAFLLVDAMRAHLREQNFTQWPKLCSSFSLVLPSSRAMLPRR 286          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A6C0CTM3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTM3_9ZZZZ)

HSP 1 Score: 162 bits (411), Expect = 6.660e-46
Identity = 95/245 (38.78%), Postives = 142/245 (57.96%), Query Frame = 1
Query:    7 RSRALCIGINYGKTANA-LQGCVNDANNLSKLLDGSGAV----AMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAE--LPGKIAYISGCRDPQTSADAYD-QDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDI 717
            +S+A+  GINY  T  A L+GCVND  N++K L          A  D     + TG  + N+I  LA  S   NL+ V+I YSGHG  + D  GDE+DG+DE I P+D+N +GVITDDL+K +L+ FN  T V  + D CHSG++ D+  +Y         +A+      I  +SGC D QTSADAY+ +  R + G MT   + + +      ++ F++  +++K+LRA+ + Q+P LT+SF +
Sbjct:    2 KSKAILFGINYNNTPQARLRGCVNDVRNMAKFLKEKAKYDVVKAYTDDDDFNKVTGSYIINSIYKLAIDSHRHNLDRVWIHYSGHGCAINDRDGDESDGKDECIVPADYNYRGVITDDLIKRVLRYFNKRTQVTCIFDCCHSGTIGDLKYEYRDPHVYREENAKSKCQSNIMLLSGCMDHQTSADAYNVRGRREFSGAMTSCLLVAME----NSSNAFEVFDDLKKMLRAKRFTQVPRLTSSFKV 242          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A6C0BGG3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BGG3_9ZZZZ)

HSP 1 Score: 159 bits (403), Expect = 1.240e-44
Identity = 90/252 (35.71%), Postives = 145/252 (57.54%), Query Frame = 1
Query:    7 RSRALCIGINYGKTANA-LQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADL---SVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTS-KICTLSGD-AELPGKIAYISGCRDPQTSADAYDQ-DSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIP 741
            R RAL  G+NY  + +A L GC+ND  N+SK L+ +  + ++  T   +         I +L +L   S S+ L++V++ YSGHG+ + D +GDE DG+DE + PSD+   G+I+DD + +L   FN  T V  + D CHSG++ D+   +   K C +      +P +I  +SGC D QTSADA++      Y G +T   +   K  P  + DVF+++A +R  LR +G++Q+P L +++++ R   FIP
Sbjct:    2 RGRALLFGLNYATSPDAKLNGCINDVINISKYLNTNLGIPVKVCTDDGDTYSTSAMGIIRNLYELALQSYSEKLDFVWVHYSGHGSYIVDKSGDEKDGKDECLVPSDYAKSGMISDDFINTLFGYFNPNTRVICVFDCCHSGTIGDVKYSWEGPKTCAVENILCSIPARIITLSGCFDNQTSADAHNVLGDNKYVGALTSCLLMVLKEQPQVKNDVFQMIANLRTKLRERGFSQLPKLCSTYNLARDKVFIP 253          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A6C0BRY5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BRY5_9ZZZZ)

HSP 1 Score: 148 bits (373), Expect = 3.240e-40
Identity = 95/253 (37.55%), Postives = 139/253 (54.94%), Query Frame = 1
Query:   10 SRALCIGINYGKTANA-LQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGE------ELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQY---TSKICTLSGDAELPGKIAYISGCRDPQTSADAYD-QDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSF 735
            S+A+  GINY  T +A L+GCVND NN++K L  +     + + V  + + E       + N +  LA  S    L  V+I +SGHG  + D  GDE DG+DE I PSDF   GVITDDL+K +L+ FN  T V  + D CHSG++ D+   Y     +   ++  ++   K+  ISGC D QTSADAY+ Q  R + G MT   +    +  +    +F ++ ++R LLR +G+ Q P L +S+ I    SF
Sbjct:    2 SKAVLFGINYIHTPSAQLRGCVNDVNNMAKYL--TDEEKYDVVKVYTDESNEYKTRANSIINILYKLAIDSHRLELKKVWIHFSGHGCYIPDHDGDEKDGKDECIVPSDFRQSGVITDDLIKRVLRYFNKNTKVTCVFDCCHSGTVCDLKYIYKDNNKEPVEVNTFSKCEAKVCMISGCMDNQTSADAYNVQGKREFSGAMTSCLL----LTLSQDKKIFNVMYKLRSLLRQKGFTQYPQLASSYVITDTESF 248          
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Match: A0A7D3UU47_9VIRU (Caspase n=1 Tax=Fadolivirus 1 TaxID=2740746 RepID=A0A7D3UU47_9VIRU)

HSP 1 Score: 150 bits (379), Expect = 7.760e-40
Identity = 91/247 (36.84%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   16 ALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCE------PTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLL-KSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIP--VLTASFDIPRAF 729
            A+ IGINY  T + L GC+NDAN+L   L        E+I +L +      PT + + N+ + L   + ++    ++ SYSGHG+ V D   DE DGRDE +CP D++  G+ITDD +  +L+ +     T+  L DACHSG++ D+   YT+ +   + +      +  ISGCRD QTSADAY      Y+G MT + + +   N +    +  L+A+MR LL    Y Q+P   LT S D+ R F
Sbjct:   14 AVLIGINYFGTGSQLNGCINDANHLKLFLLEKCGYLPENIMMLTDDGLGVRPTKQNIINSFATLVSKATNEQFTELWFSYSGHGSYVTDYNSDENDGRDEVLCPVDYDTAGMITDDFIYANLVNKLPATATLFALTDACHSGTMFDLPFLYTNSLINNNKNTGHVANVMSISGCRDDQTSADAYIGSK--YEGAMTWSFLNALS-NSSYNIKLNDLLAKMRTLL-LNNYTQVPQLALTKSLDLDRYF 256          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174751 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCN1_9STRA4.380e-179100.00Peptidase C14, caspase domain-containing protein n... [more]
A0A835YZ34_9STRA5.950e-13676.71Caspase domain-containing protein n=1 Tax=Tribonem... [more]
A0A835Z623_9STRA1.180e-13575.81Peptidase C14 n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A836CI31_9STRA9.390e-9658.70Peptidase C14, caspase domain-containing protein n... [more]
A0A836CKL4_9STRA4.060e-6046.12Putative caspase-1, p20 n=2 Tax=Tribonema minus Ta... [more]
A0A835XKF2_9CHLO1.200e-4638.22Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A6C0CTM3_9ZZZZ6.660e-4638.78Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0BGG3_9ZZZZ1.240e-4435.71Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0BRY5_9ZZZZ3.240e-4037.55Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A7D3UU47_9VIRU7.760e-4036.84Caspase n=1 Tax=Fadolivirus 1 TaxID=2740746 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_117contigContig_117:209339..210088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|174751|e_gw1.117.108.1
DescriptionCaspase domain
COG categoryDO
Max annot lvl4751|Fungi
EggNOG OGsKOG1546@1|root,KOG1546@2759|Eukaryota,3A34R@33154|Opisthokonta,3PCCQ@4751|Fungi,3V43I@5204|Basidiomycota,225NS@155619|Agaricomycetes,3H6Y7@355688|Agaricomycetes incertae sedis
Evalue5.82e-33
Seed ortholog202698.XP_007387201.1
Hectar predicted targeting categoryother localisation
TranscriptId175073
TrackFilteredModels1
ProteinId174751
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174751gene_5054Tribonema minus UTEX_B_3156 geneContig_117 209339..210088 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5054_1exon_5054_1Tribonema minus UTEX_B_3156 exonContig_117 209339..210088 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5054CDS_5054Tribonema minus UTEX_B_3156 CDSContig_117 209339..210088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174751Trimin1|174751|e_gw1.117.108.1Tribonema minus UTEX_B_3156 polypeptideContig_117 209339..210088 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Trimin1|174751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_117:209339..210088- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTAGATCAAGAGCGCTTTGCATCGGAATCAATTATGGCAAGACTGC
GAATGCACTGCAAGGATGTGTGAATGACGCCAACAACTTGTCAAAGCTGC
TGGATGGTTCAGGAGCTGTGGCAATGGAAGACATCACTGTGCTATGTGAG
CCCACCGGAGAGGAGTTATGCAATGCGATATCGCATCTCGCTGATCTCAG
CGTCTCACAAAACTTGAACTATGTTTTCATCAGTTACAGCGGGCATGGCA
CACAGGTCAAAGATGTGACCGGAGATGAGGCTGATGGTAGGGATGAGGCT
ATATGCCCCTCTGACTTCAACATCAAGGGCGTCATCACCGATGATCTTCT
GAAATCACTTCTGCAGCGATTCAACATTGCCACAACAGTCTGCTTTCTAG
CAGACGCGTGTCACTCTGGCTCTCTGCTGGACATGAACAGGCAGTACACA
TCAAAGATATGCACACTGTCAGGTGATGCAGAGCTCCCTGGAAAAATAGC
TTACATTTCCGGGTGTCGGGACCCTCAGACGTCCGCTGATGCATACGATC
AGGACAGCCGGACGTACCAAGGGGTGATGACGTGCGCGCGCATCAAGTCA
CAGAAGATCAATCCTGCGACCCGGACAGACGTGTTCAAGCTTGTGGCCGA
GATGAGAAAACTTCTCAGGGCCCAAGGCTACGCTCAGATCCCAGTGCTCA
CCGCATCATTCGATATCCCCAGGGCTTTTTCGTTCATACCGTACAAGTGA
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protein sequence of jgi.p|Trimin1|174751

>Trimin1|174751|e_gw1.117.108.1 ID=Trimin1|174751|e_gw1.117.108.1|Name=jgi.p|Trimin1|174751|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp
MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCE
PTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEA
ICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYT
SKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKS
QKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK*
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mRNA from alignment at Contig_117:209339..210088-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Trimin1|174751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_117:209339..210088- (Tribonema minus UTEX_B_3156 )
ATGAGTAGATCAAGAGCGCTTTGCATCGGAATCAATTATGGCAAGACTGC GAATGCACTGCAAGGATGTGTGAATGACGCCAACAACTTGTCAAAGCTGC TGGATGGTTCAGGAGCTGTGGCAATGGAAGACATCACTGTGCTATGTGAG CCCACCGGAGAGGAGTTATGCAATGCGATATCGCATCTCGCTGATCTCAG CGTCTCACAAAACTTGAACTATGTTTTCATCAGTTACAGCGGGCATGGCA CACAGGTCAAAGATGTGACCGGAGATGAGGCTGATGGTAGGGATGAGGCT ATATGCCCCTCTGACTTCAACATCAAGGGCGTCATCACCGATGATCTTCT GAAATCACTTCTGCAGCGATTCAACATTGCCACAACAGTCTGCTTTCTAG CAGACGCGTGTCACTCTGGCTCTCTGCTGGACATGAACAGGCAGTACACA TCAAAGATATGCACACTGTCAGGTGATGCAGAGCTCCCTGGAAAAATAGC TTACATTTCCGGGTGTCGGGACCCTCAGACGTCCGCTGATGCATACGATC AGGACAGCCGGACGTACCAAGGGGTGATGACGTGCGCGCGCATCAAGTCA CAGAAGATCAATCCTGCGACCCGGACAGACGTGTTCAAGCTTGTGGCCGA GATGAGAAAACTTCTCAGGGCCCAAGGCTACGCTCAGATCCCAGTGCTCA CCGCATCATTCGATATCCCCAGGGCTTTTTCGTTCATACCGTACAAGTGA
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Coding sequence (CDS) from alignment at Contig_117:209339..210088-

>mRNA_5054 ID=mRNA_5054|Name=jgi.p|Trimin1|174751|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=750bp|location=Sequence derived from alignment at Contig_117:209339..210088- (Tribonema minus UTEX_B_3156 )
ATGAGTAGATCAAGAGCGCTTTGCATCGGAATCAATTATGGCAAGACTGC
GAATGCACTGCAAGGATGTGTGAATGACGCCAACAACTTGTCAAAGCTGC
TGGATGGTTCAGGAGCTGTGGCAATGGAAGACATCACTGTGCTATGTGAG
CCCACCGGAGAGGAGTTATGCAATGCGATATCGCATCTCGCTGATCTCAG
CGTCTCACAAAACTTGAACTATGTTTTCATCAGTTACAGCGGGCATGGCA
CACAGGTCAAAGATGTGACCGGAGATGAGGCTGATGGTAGGGATGAGGCT
ATATGCCCCTCTGACTTCAACATCAAGGGCGTCATCACCGATGATCTTCT
GAAATCACTTCTGCAGCGATTCAACATTGCCACAACAGTCTGCTTTCTAG
CAGACGCGTGTCACTCTGGCTCTCTGCTGGACATGAACAGGCAGTACACA
TCAAAGATATGCACACTGTCAGGTGATGCAGAGCTCCCTGGAAAAATAGC
TTACATTTCCGGGTGTCGGGACCCTCAGACGTCCGCTGATGCATACGATC
AGGACAGCCGGACGTACCAAGGGGTGATGACGTGCGCGCGCATCAAGTCA
CAGAAGATCAATCCTGCGACCCGGACAGACGTGTTCAAGCTTGTGGCCGA
GATGAGAAAACTTCTCAGGGCCCAAGGCTACGCTCAGATCCCAGTGCTCA
CCGCATCATTCGATATCCCCAGGGCTTTTTCGTTCATACCGTACAAGTGA
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