mRNA_5005 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|151441
Unique NamemRNA_5005
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A835ZH88_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH88_9STRA)

HSP 1 Score: 314 bits (805), Expect = 1.040e-108
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
Query:    1 MGEGSSGIVFRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            MGEGSSGIVFRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG
Sbjct:    1 MGEGSSGIVFRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 151          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A836CJ31_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ31_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.370e-65
Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 1
Query:   79 DDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            +D+T++ICN S+ SD+ G++DGLLCDGLS+IFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANG L +Y++ M  PSIEQRVGWCEQLRK  LYLHTF MVHSDIKP+NV+LD+ L AKLADMG
Sbjct:    5 EDDTYKICNDSTTSDSEGSDDGLLCDGLSQIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGSLGNYISSMSPPSIEQRVGWCEQLRKGTLYLHTFNMVHSDIKPDNVLLDDTLTAKLADMG 129          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A7C8I416_9PLEO (Kinase-like domain-containing protein n=1 Tax=Massariosphaeria phaeospora TaxID=100035 RepID=A0A7C8I416_9PLEO)

HSP 1 Score: 77.4 bits (189), Expect = 5.740e-14
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  205 HPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLAD 447
            HP I+Q    +    ++E+  NG L DY+T  P+ S+EQR+ WC QL +A  Y+H+   +H D++ +N++LD +LN KLAD
Sbjct:   91 HPRIIQSKGLTEDGLLLEFAPNGNLHDYLTTHPEASLEQRLAWCIQLTEAVAYIHSKRTLHCDLRHDNILLDLDLNLKLAD 171          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A317WL92_9EURO (Kinase-like protein (Fragment) n=1 Tax=Aspergillus sclerotioniger CBS 115572 TaxID=1450535 RepID=A0A317WL92_9EURO)

HSP 1 Score: 73.9 bits (180), Expect = 4.720e-13
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  205 HPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLAD 447
            HP I++ +  + H  V++Y   G L +Y+T  PD S+EQR  WC+Q  +A  Y+H   ++H D+ P N++LD++L+  LAD
Sbjct:   58 HPRIIKSHGLTDHGLVLQYALKGNLDEYITHNPDVSVEQRPHWCKQTAEAVSYIHEKNVMHCDMGPRNLLLDDDLDILLAD 138          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: K0KR91_WICCF (Non-specific serine/threonine protein kinase n=1 Tax=Wickerhamomyces ciferrii (strain ATCC 14091 / BCRC 22168 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031 F-60-10) TaxID=1206466 RepID=K0KR91_WICCF)

HSP 1 Score: 75.5 bits (184), Expect = 5.310e-13
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 1
Query:    1 MGEGSSGIVFRAEWLGVP--AAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFY----LASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            +G+GS+G V  AE L     AAVK++        + N S   D  G +   L  G+ R   E+ I + + HP +++ Y     +     ++EY+  G L D +      S ++ +G+  Q+   A Y H   + H D+KPEN++LD NLN K+AD G
Sbjct:   37 LGKGSTGRVLLAENLNTQQKAAVKVVSKS-----VLNYSENGDEKGRDAAGLAYGIER---EIIIMKLLNHPNVLRLYDVWETSKSLYLILEYVEGGELFDLLVEKGPLSEQEALGYFRQIILGASYCHALGICHRDLKPENLLLDHNLNIKIADFG 185          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A8H7FSY8_9AGAM (Protein kinase domain-containing protein n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7FSY8_9AGAM)

HSP 1 Score: 73.6 bits (179), Expect = 2.390e-12
Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 1
Query:    1 MGEGSSGIVFRAEWL--GVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFY----LASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            +G+GS G V  A  L  G  AA+KI+  +        T S+++   + + +L      +  E+ + + I+HP I+Q Y     ++    V+EY+  G L D++      S  + +G+ +Q+  A  Y H F + H D+KPEN++LDEN+N K+AD G
Sbjct:   55 IGKGSQGRVRIARHLKTGQLAAIKIVNKN------LFTKSMANLTDDPEHVLLS----LEREIVVMKLIQHPNIIQLYDVWETSTELYMVLEYVEGGELFDHLCSRGRLSTTEALGFFQQIITAIDYCHRFNIAHRDLKPENLLLDENMNIKVADFG 201          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A4S4MZQ1_9APHY (Protein kinase domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MZQ1_9APHY)

HSP 1 Score: 73.6 bits (179), Expect = 2.400e-12
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 1
Query:    1 MGEGSSGIV--FRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFY----LASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            +G+GSSG V   R    G  AAVKI+    +   + +  S+ + G   + +L      I  E+ I + I HP I++ Y     +S    ++EY+  G L +Y+      S  + +G+ +Q+  A  Y H F + H D+KPEN++LD N+N K+AD G
Sbjct:   26 IGKGSSGRVRIARHSKTGQYAAVKIVS---KNALLNSRMSMRNLGDEAERIL----HSIEREIVIMKLIEHPNIMRLYDVWETSSELYLILEYVEGGELFEYLCNKGRLSTPEALGYFQQIITAVNYCHRFNIAHRDLKPENLLLDGNMNIKVADFG 175          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A6A5U0S2_9PLEO (EKC/KEOPS complex subunit BUD32 n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5U0S2_9PLEO)

HSP 1 Score: 72.4 bits (176), Expect = 3.130e-12
Identity = 31/81 (38.27%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  205 HPFIVQFYLASPHACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLAD 447
            HP IVQ    +    ++E++ NG L DY+   P+ S++QR+ WC QL +A  Y+H+  ++H D++ +N+++D +L+ KLAD
Sbjct:   63 HPRIVQSRGLTEDGLLLEFVPNGNLHDYLLAHPESSLQQRLVWCTQLTEAVTYIHSRRVLHCDLRHDNILVDLDLDLKLAD 143          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A1J4KGK5_9EUKA (CAMK family protein kinase n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KGK5_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 9.130e-12
Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 1
Query:    1 MGEGSSGIVFRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLLCDGLSRIFEEVEIGRRIRHPFIVQFYLASPH----ACVMEYMANGPLCDYMTLMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADMG 453
            +G GS+ IV   E             +++TF+  +   IS     E  L+      I +E+ I   + HPFIV+ +    +      +M+Y  NG L  Y T     S+ Q     + L +A  YLH   + H DIKPENV+LDEN++ KL D G
Sbjct:   27 LGNGSTSIVCLVE-------------EEDTFQEYSAKIISKKNMEEKNLM----KSIQKEIAILEELDHPFIVKIHETFEYDDYIVIIMDYCENGDLLSYATERGFKSLYQMKKIVKNLFEAIQYLHVRGISHGDIKPENVLLDENMSPKLTDFG 164          
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Match: A0A507AY53_9PEZI (Protein kinase domain-containing protein n=1 Tax=Thyridium curvatum TaxID=1093900 RepID=A0A507AY53_9PEZI)

HSP 1 Score: 69.7 bits (169), Expect = 9.300e-12
Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 1
Query:  205 HPFIVQFYLASPHACVMEYMANGPLCDYMT--LMPDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLAD 447
            HP I+     S     +E  ANG L  Y+T      PSI+QR+ WC +  +A  ++H+  ++H DI+P N++LDENL+ KL+D
Sbjct:   66 HPRIIGLKRLSEAGLYLERTANGTLYSYLTDRTKSPPSIQQRLAWCREATEAVAHVHSKRVIHCDIQPTNLLLDENLHLKLSD 148          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151441 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZH88_9STRA1.040e-108100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A836CJ31_9STRA1.370e-6577.60Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7C8I416_9PLEO5.740e-1441.98Kinase-like domain-containing protein n=1 Tax=Mass... [more]
A0A317WL92_9EURO4.720e-1339.51Kinase-like protein (Fragment) n=1 Tax=Aspergillus... [more]
K0KR91_WICCF5.310e-1331.85Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8H7FSY8_9AGAM2.390e-1231.85Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A4S4MZQ1_9APHY2.400e-1232.48Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A6A5U0S2_9PLEO3.130e-1238.27EKC/KEOPS complex subunit BUD32 n=1 Tax=Byssotheci... [more]
A0A1J4KGK5_9EUKA9.130e-1232.26CAMK family protein kinase n=1 Tax=Tritrichomonas ... [more]
A0A507AY53_9PEZI9.300e-1239.76Protein kinase domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_117contigContig_117:21276..21728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|151441|gw1.117.100.1
BRITEko00000,ko00001,ko01000,ko01001,ko04812
KEGG Pathwayko04011,ko04111,map04011,map04111
KEGG koko:K02515,ko:K06668,ko:K18679,ko:K18680
EC2.7.11.1
GOsGO:0000003,GO:0000075,GO:0000086,GO:0000131,GO:0000144,GO:0000165,GO:0000166,GO:0000187,GO:0000278,GO:0000280,GO:0000399,GO:0000921,GO:0001403,GO:0001558,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0004712,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0005940,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006996,GO:0007010,GO:0007049,GO:0007093,GO:0007114,GO:0007117,GO:0007124,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008361,GO:0009056,GO:0009057,GO:0009267,GO:0009405,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010389,GO:0010458,GO:0010468,GO:0010562,GO:0010564,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0010948,GO:0010971,GO:0010972,GO:0015630,GO:0016043,GO:0016049,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030163,GO:0030308,GO:0030427,GO:0030447,GO:0030554,GO:0031097,GO:0031106,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031567,GO:0031569,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032147,GO:0032153,GO:0032155,GO:0032156,GO:0032161,GO:0032185,GO:0032268,GO:0032270,GO:0032465,GO:0032496,GO:0032505,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032675,GO:0032680,GO:0032879,GO:0032880,GO:0033036,GO:0033365,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0034613,GO:0034622,GO:0035556,GO:0035639,GO:0035690,GO:0035924,GO:0036094,GO:0036211,GO:0036267,GO:0040007,GO:0040008,GO:0042149,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042594,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044110,GO:0044116,GO:0044117,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044351,GO:0044380,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0044879,GO:0045088,GO:0045089,GO:0045786,GO:0045787,GO:0045859,GO:0045860,GO:0045926,GO:0045930,GO:0045931,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051301,GO:0051302,GO:0051338,GO:0051347,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060255,GO:0060258,GO:0060341,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070783,GO:0070784,GO:0070785,GO:0070848,GO:0070887,GO:0070925,GO:0070935,GO:0071310,GO:0071341,GO:0071363,GO:0071496,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072395,GO:0072413,GO:0072453,GO:0072471,GO:0072697,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0097159,GO:0097367,GO:0098657,GO:0099568,GO:0099738,GO:0106011,GO:0106012,GO:0120046,GO:0120047,GO:0140014,GO:0140096,GO:1900034,GO:1900428,GO:1900429,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901568,GO:1901575,GO:1901700,GO:1901900,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902369,GO:1902373,GO:1902412,GO:1902531,GO:1902533,GO:1902749,GO:1902750,GO:1902751,GO:1902935,GO:1903047,GO:1903311,GO:1903312,GO:1903555,GO:1903827,GO:1903829,GO:1904375,GO:1904377,GO:1904776,GO:1904778,GO:1990778,GO:2000220,GO:2000221
Preferred nameGIN4
DescriptionPkinase-domain-containing protein
COG categoryT
Max annot lvl4751|Fungi
EggNOG OGsKOG0588@1|root,KOG0588@2759|Eukaryota,38BGN@33154|Opisthokonta,3NW2V@4751|Fungi,3UY2M@5204|Basidiomycota,2259P@155619|Agaricomycetes,3H124@355688|Agaricomycetes incertae sedis
Evalue2.56e-14
Seed ortholog160860.XP_007348043.1
Hectar predicted targeting categoryother localisation
TranscriptId151763
TrackFilteredModels1
ProteinId151441
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151441gene_5005Tribonema minus UTEX_B_3156 geneContig_117 21276..21728 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5005_1exon_5005_1Tribonema minus UTEX_B_3156 exonContig_117 21276..21728 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5005CDS_5005Tribonema minus UTEX_B_3156 CDSContig_117 21276..21728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151441Trimin1|151441|gw1.117.100.1Tribonema minus UTEX_B_3156 polypeptideContig_117 21276..21728 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5005 ID=mRNA_5005|Name=jgi.p|Trimin1|151441|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=453bp|location=Sequence derived from alignment at Contig_117:21276..21728+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGGAGGGATCTTCAGGTATTGTGTTTCGTGCTGAGTGGCTCGGGGT
GCCTGCTGCTGTAAAGATCATGAAGGATGACGACGAGACGTTTAGGATTT
GCAATACCAGTTCCATATCAGATGCGGGCGGCAACGAAGACGGTTTGCTC
TGTGATGGGTTGTCTCGCATATTTGAGGAGGTTGAGATTGGTCGCAGGAT
ACGGCACCCTTTCATCGTTCAGTTTTATCTGGCATCTCCTCACGCATGCG
TAATGGAGTACATGGCCAACGGGCCGCTGTGCGACTACATGACCTTGATG
CCAGATCCGTCGATTGAGCAACGTGTGGGGTGGTGCGAACAGCTCCGCAA
AGCCGCGCTTTACCTGCACACTTTCACTATGGTACACTCTGACATCAAGC
CCGAAAATGTAATGTTGGATGAGAACCTCAATGCGAAGCTCGCTGACATG
GGA
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protein sequence of jgi.p|Trimin1|151441

>Trimin1|151441|gw1.117.100.1 ID=Trimin1|151441|gw1.117.100.1|Name=jgi.p|Trimin1|151441|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=151bp
MGEGSSGIVFRAEWLGVPAAVKIMKDDDETFRICNTSSISDAGGNEDGLL
CDGLSRIFEEVEIGRRIRHPFIVQFYLASPHACVMEYMANGPLCDYMTLM
PDPSIEQRVGWCEQLRKAALYLHTFTMVHSDIKPENVMLDENLNAKLADM
G
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mRNA from alignment at Contig_117:21276..21728+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5005 ID=mRNA_5005|Name=jgi.p|Trimin1|151441|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=453bp|location=Sequence derived from alignment at Contig_117:21276..21728+ (Tribonema minus UTEX_B_3156 )
ATGGGGGAGGGATCTTCAGGTATTGTGTTTCGTGCTGAGTGGCTCGGGGT GCCTGCTGCTGTAAAGATCATGAAGGATGACGACGAGACGTTTAGGATTT GCAATACCAGTTCCATATCAGATGCGGGCGGCAACGAAGACGGTTTGCTC TGTGATGGGTTGTCTCGCATATTTGAGGAGGTTGAGATTGGTCGCAGGAT ACGGCACCCTTTCATCGTTCAGTTTTATCTGGCATCTCCTCACGCATGCG TAATGGAGTACATGGCCAACGGGCCGCTGTGCGACTACATGACCTTGATG CCAGATCCGTCGATTGAGCAACGTGTGGGGTGGTGCGAACAGCTCCGCAA AGCCGCGCTTTACCTGCACACTTTCACTATGGTACACTCTGACATCAAGC CCGAAAATGTAATGTTGGATGAGAACCTCAATGCGAAGCTCGCTGACATG GGA
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Coding sequence (CDS) from alignment at Contig_117:21276..21728+

>mRNA_5005 ID=mRNA_5005|Name=jgi.p|Trimin1|151441|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=453bp|location=Sequence derived from alignment at Contig_117:21276..21728+ (Tribonema minus UTEX_B_3156 )
ATGGGGGAGGGATCTTCAGGTATTGTGTTTCGTGCTGAGTGGCTCGGGGT
GCCTGCTGCTGTAAAGATCATGAAGGATGACGACGAGACGTTTAGGATTT
GCAATACCAGTTCCATATCAGATGCGGGCGGCAACGAAGACGGTTTGCTC
TGTGATGGGTTGTCTCGCATATTTGAGGAGGTTGAGATTGGTCGCAGGAT
ACGGCACCCTTTCATCGTTCAGTTTTATCTGGCATCTCCTCACGCATGCG
TAATGGAGTACATGGCCAACGGGCCGCTGTGCGACTACATGACCTTGATG
CCAGATCCGTCGATTGAGCAACGTGTGGGGTGGTGCGAACAGCTCCGCAA
AGCCGCGCTTTACCTGCACACTTTCACTATGGTACACTCTGACATCAAGC
CCGAAAATGTAATGTTGGATGAGAACCTCAATGCGAAGCTCGCTGACATG
GGA
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