mRNA_4989 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A835Z3J0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J0_9STRA) HSP 1 Score: 550 bits (1416), Expect = 3.790e-192 Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 1 Query: 1 MATLGKDKPSEAQLAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYDAKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSNDDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHREGIAPSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSELEIGSEGRPSDKDGNRSSTMAINPREPCPLFVNVLDSGVGVH 1335 MATLGKDKPSEAQLAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYDAKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSNDDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHREGIAPSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSELEIGSEGRPSDKDGNRSSTMAINPREPCPLFVNVLDSGVGVH Sbjct: 1 MATLGKDKPSEAQLAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYDAKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSNDDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHREGIAPSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSELEIGSEGRPSDKDGNRSSTMAINPREPCPLFVNVLDSGVGVH 445
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: W5QGC3_SHEEP (DnaJ heat shock protein family (Hsp40) member C17 n=22 Tax=Artiodactyla TaxID=91561 RepID=W5QGC3_SHEEP) HSP 1 Score: 101 bits (252), Expect = 1.790e-20 Identity = 113/316 (35.76%), Postives = 160/316 (50.63%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGD-----DTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCV-DHKDYESVVMMRMRQAAERQRLIREMEHRE 942 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD A++QAAE +L E XXXXXXXXXXXXXX A + ++RL+EEG R+ XXX R +E E ++++KW ++ + D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G ++ H+ G RG V +DYES+VMMRMRQAAERQ+LI +M+ + Sbjct: 8 LQMDLYALLGIEEKAEDKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKARKQAAERTQKLDERRKKVKLDLEAXXXXXXXXXXXXXXESGNA--------RTLEQEIERLREEGS--RQLXXXXXXXXXXIRQEQEQRLRGMAENPESKETPKLKLKWKSKKEAESQGGYSRDVLLRLFQKYGEVLDLVLSSKKAGTAVVEFATVKAAELA---VQNEVGLVDNPLKISWLEGRPQSAMGHN------------HPGLSRGSVVSERDYESLVMMRMRQAAERQQLIAQMQQED 298
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: DJC17_BOVIN (DnaJ homolog subfamily C member 17 n=10 Tax=Bovidae TaxID=9895 RepID=DJC17_BOVIN) HSP 1 Score: 100 bits (250), Expect = 3.350e-20 Identity = 114/314 (36.31%), Postives = 159/314 (50.64%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGD---DTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCV-DHKDYESVVMMRMRQAAERQRLIREMEHRE 942 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXX A + ++RL+EEG + E ++ E + +++ K + S G D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G ++ H+ G RG V +DYES+VMMRMRQAAERQ+LI +M+ + Sbjct: 8 LQMDLYALLGIEEKAEDKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDXXXXXXXXXXXXXXXXXXSGSA--------RTLEQEIERLREEGSRQLEEQXXXXXXQIRQEQEQRLTGMAKNPENKETPKLKLKWKSKKEAESQGGYSRDVLLQLFQKYGEVLNLVLSSKKAGTAVVEFATVKAAELA---VQNEVGLVDNPLKISWLEGRPQSAMGHN------------HPGLSRGSVVSERDYESLVMMRMRQAAERQQLIAQMQQED 298
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A8C2SD93_CAPHI (DnaJ heat shock protein family (Hsp40) member C17 n=2 Tax=Capra hircus TaxID=9925 RepID=A0A8C2SD93_CAPHI) HSP 1 Score: 100 bits (250), Expect = 3.760e-20 Identity = 115/316 (36.39%), Postives = 162/316 (51.27%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGD-----DTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCV-DHKDYESVVMMRMRQAAERQRLIREMEHRE 942 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD A++QAAE +L E XXXXXXXXXXXXXXXXXX Q + + +RL+EEG R+ + R +E E ++++KW R+ + D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G ++ H+ G RG V +DYES+VMMRMRQAAERQ+LI +M+ + Sbjct: 8 LQMDLYALLGIEEKAEDKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKARKQAAERTQKLDERRKKVKLDXXXXXXXXXXXXXXXXXXSGSTRTLEQEVAEPSLQI-ERLREEGS--RQLEEQQRLIREQIRQEQEQRLRGMAENPENKETPKLKLKWKSRKEAESQGGYSRDVLLRLFQKYGEVLDLVLSSKKAGTAVVEFATVKAAELA---VQNEVGLVDNPLKISWLEGRPQSAMGHN------------HPGLSRGSVVSERDYESLVMMRMRQAAERQQLIAQMQQED 305
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: M3XBF3_FELCA (DnaJ heat shock protein family (Hsp40) member C17 n=18 Tax=Boreoeutheria TaxID=1437010 RepID=M3XBF3_FELCA) HSP 1 Score: 100 bits (248), Expect = 6.250e-20 Identity = 127/320 (39.69%), Postives = 173/320 (54.06%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRR-----RCSHGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAI--PSHDADGXXXXXXXXXXXGAERGCV-DHKDYESVVMMRMRQAAERQRLIREMEHREGI 948 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXXXXXX + ++RL+EEG R+ XXXXX XX R ++E ++++KW + R S+ D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G + PSH G +G V +DYES+VMMRMRQAAERQ+LI +M+ + + Sbjct: 8 LQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLXXXXXXXXXXXXXXXXXXXXXXT--------RTLEQEIERLREEGS--RQLXXXXXXXXXXXXQEXXQRLRGKAENPEGRGTPKLKLKWKCKKEDESRGSYSRDVLLQLFQKYGEVLNLVLSSKKAGTAVVEFATVKAAELA---VQNEVGLIDNPLKISWLEGRPQGAGGPSH--------------PGLSQGSVLSERDYESLVMMRMRQAAERQQLIAQMQQEDEV 300
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A8B6ZXB7_ORYAF (dnaJ homolog subfamily C member 17 n=5 Tax=Eutheria TaxID=9347 RepID=A0A8B6ZXB7_ORYAF) HSP 1 Score: 99.0 bits (245), Expect = 1.590e-19 Identity = 119/321 (37.07%), Postives = 167/321 (52.02%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCS-----HGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAI--PSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHREGIAP 954 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXXX R + ++RL+EEG R+ + XXX R ++E ++++KW R+ + + D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G + PSH ++ V +DYES+VMMRMRQAAERQ+LI +M+ + P Sbjct: 8 LQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLXXXXXXXXXXXXXXXXXXX--------NRSTRTLQQEIERLREEGS--RQLEEQQRLIQKQMCQEXXXRLRGKAENTEGKGTPKLKLKWKCRKENESKGGYSKDVLLQLFQKYGEVLNLVLSRKKAGTAVVEFATVKAAELA---VQNEVGLVDNPLKISWLEGQPQGSVGPSHPG-------------LSQDSVVSERDYESLVMMRMRQAAERQQLIAQMQQEDKEGP 302
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: M3YBG6_MUSPF (DnaJ heat shock protein family (Hsp40) member C17 n=20 Tax=Laurasiatheria TaxID=314145 RepID=M3YBG6_MUSPF) HSP 1 Score: 99.0 bits (245), Expect = 1.590e-19 Identity = 121/324 (37.35%), Postives = 167/324 (51.54%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGD--------DTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRG---GDRAIPSHDADGXXXXXXXXXXXGAERGCV-DHKDYESVVMMRMRQAAERQRLIREMEHREGI 948 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXXXXX + ++RL+EEG R+ + R ++E+ ++++KW +C D D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G G R PSH G +G V +DYES+VMMRMRQAAERQ+LI +M+ + + Sbjct: 8 LQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDXXXXXXXXXXXXXXXXXXXXXT--------RTLEQEIERLREEGS--RQLEEQQKLIQEQIRQEREQRLRGKAESPEGRGTPKLKLKW---KCKKEDESKGGYSRDVLLQLFQKYGEVLNLVLSSKKAGTAVVEFATIKAAELA---VQNEVGLVDNPLKISWLEGRPQGGRG-PSHS--------------GLSQGSVLSERDYESLVMMRMRQAAERQQLIAQMQREDEV 300
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A671DXZ3_RHIFE (DnaJ heat shock protein family (Hsp40) member C17 n=9 Tax=Laurasiatheria TaxID=314145 RepID=A0A671DXZ3_RHIFE) HSP 1 Score: 98.2 bits (243), Expect = 2.970e-19 Identity = 123/327 (37.61%), Postives = 168/327 (51.38%), Query Frame = 1 Query: 28 SEAQLAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSHGD--------DTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAI--PSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHREGIA 951 +E L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXXXXXXX R + RL+EEG + XXX + + G ++++KW +C D D L LF +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G + + PSH ++ V +DYES+VMMRMRQAAERQ+LI M+ + +A Sbjct: 4 TEELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVXXXXXXXXXXXXXXXXXXXXXXX------SRSSRTLGQEIQRLREEGSRQXXXXXXXXXXXXXKEREQRVRGKAENPGGTP----KLKLKW---KCKKEDESKGGYSRDVLLQLFQKYGEVLNLVLSSKKAGTAVVEFATVKAAELA---VHNEVGLLDNPLKISWLEGRPQGMEDPSHPG-------------LSQDSVVSERDYESLVMMRMRQAAERQQLIARMQQEDAMA 301
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: UPI0018F55A8B (dnaJ homolog subfamily C member 17 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F55A8B) HSP 1 Score: 97.4 bits (241), Expect = 5.520e-19 Identity = 107/315 (33.97%), Postives = 156/315 (49.52%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRRCSH-----GDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHRE 942 L D YA LGV + A D+ ++K+YR+ AL CHPDKNPD P+A LF L++ + L D+ R YD A++QAAE +L E XXXXXXXXXXXX + ++RL+EEG R+ + R + E+G ++++KW ++ H D L + +YG V + ++G K SA+V FAT +AA A A+ N D+ L+ + + G R + D DG + V +DYES+VMMR+RQAAERQ+LI +M+ + Sbjct: 8 LQLDLYALLGVEEKAADKEVKKAYRQKALTCHPDKNPDDPQAVELFHRLSQALEVLTDAAARAAYDKIRRARKQAAERTQKLDERRKKVKLDXXXXXXXXXXXXSEEETRNTRT----------LEQEIERLREEGS--RQLEEQQRLIQDQIRQEREQRLRGKLESGEGRGTPKLKLKWKCKKDDHTQGGYSKDVLLRILEKYGQVLNLVVSGKKTGSAVVEFATVQAA---ALAVRNEVGLVDNPLKVSWLEG--RPL---DPDGHGHGHVPLP----QGSVVSERDYESLVMMRLRQAAERQQLIAQMQRED 298
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: UPI00033153D9 (dnaJ homolog subfamily C member 17 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00033153D9) HSP 1 Score: 96.3 bits (238), Expect = 1.400e-18 Identity = 113/315 (35.87%), Postives = 162/315 (51.43%), Query Frame = 1 Query: 40 LAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPDKPEAAALFDTLTRTKDFLLDSETRREYD----AKRQAAEARARLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGAQRGGSGAKSVLDRLKEEGRARREAAAAAQAAXXXXXXXXXXXXRPRSEAGAELEERQVRVKWSRRR-----CSHGDDTLAVLFGRYGSVTAVSLTGTKGNSALVTFATPEAASAAAAALSN-----DDTLRATRVRGGDRAIPSHDADGXXXXXXXXXXXGAERGCVDHKDYESVVMMRMRQAAERQRLIREMEHRE 942 L D YA LG+ + A D+ ++K+YR+ AL CHPDKNPD P AA LF L++ + L D+ R YD AK+QAAE +L E XXXXXXXXXXXXXXXXXXXXX R + ++RL+EEG R+ + R ++E ++++KW R+ + D L L +YG V + L+ K +A+V FAT +AA A + N D+ L+ + + G + H G ++ V +DYES+VMMR+RQAAERQ+L+ +M+ + Sbjct: 8 LQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVXXXXXXXXXXXXXXXXXXXXXG--------RSTRTLEQEIERLREEGS--RQLQEQQRLIQEQLRQERELRLRGKAEDHEGKATPKLKLKWKCRKEDESQGGYSRDVLLRLLQKYGEVLNLVLSSKKSGTAVVEFATVKAAELA---VQNEVGLVDNPLKISWLEGQPQGAVGHSHPGL-----------SQGSVVSERDYESLVMMRLRQAAERQQLMAQMQQED 298
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A835ZDC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC7_9STRA) HSP 1 Score: 403 bits (1035), Expect = 6.750e-140 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 Query: 70 MCHRSMQRDVQMSDEASSSRDLFRSSMHNTRQAVHDLVAEYRDDPEFNSIRKQMMEPFRNAARNSMLGFVGSGLAGLGLARYLAKPARMARYRPGPMGQFAIVAGAAIVGGRLIYMSSKPTAGVAQLIEGDDKLAAPICRAAASMKPCADDPECRKLMQRGGGRMYPMLSWYEACQQRSARLGGNAAGAAGPVAFSEGDGAPPLSH 687 MCHRSMQRDVQMSDEASSSRDLFRSSMHNTRQAVHDLVAEYRDDPEFNSIRKQMMEPFRNAARNSMLGFVGSGLAGLGLARYLAKPARMARYRPGPMGQFAIVAGAAIVGGRLIYMSSKPTAGVAQLIEGDDKLAAPICRAAASMKPCADDPECRKLMQRGGGRMYPMLSWYEACQQRSARLGGNAAGAAGPVAFSEGDGAPPLSH Sbjct: 1 MCHRSMQRDVQMSDEASSSRDLFRSSMHNTRQAVHDLVAEYRDDPEFNSIRKQMMEPFRNAARNSMLGFVGSGLAGLGLARYLAKPARMARYRPGPMGQFAIVAGAAIVGGRLIYMSSKPTAGVAQLIEGDDKLAAPICRAAASMKPCADDPECRKLMQRGGGRMYPMLSWYEACQQRSARLGGNAAGAAGPVAFSEGDGAPPLSH 206
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Match: A0A835ZB04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB04_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.460e-24 Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 178 LVAEYRDDPEFNSIRKQMMEPFRNAARNSMLGFVGSGLAGLGLARYLAKPARMARYRPGPMGQFAIVAGAAIVGGRLIYMSSKPTAGVAQLIEGDDKLAAPICRAAASMKPCADDPECR---KLMQRGGG 558 + +YR +F+ + +MMEP R R S++G+ GSGLAGLGLARYLA P+R RYRPGP+GQ AI++GAA++GG ++ S P A + Q+I+ D ++ +C+AA M PCA L RGGG Sbjct: 14 IAHQYRGRTDFH-VTPEMMEPLRRTER-SLVGYAGSGLAGLGLARYLAHPSRAPRYRPGPVGQLAIISGAALIGGEIMAERSGPCA-ITQVIDSDKEMGGALCQAAERMGPCASGNNLSTICNLSGRGGG 140 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348407 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|348407 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4989 ID=mRNA_4989|Name=jgi.p|Trimin1|348407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1338bp|location=Sequence derived from alignment at Contig_23:1158896..1164078+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCAACGCTGGGCAAGGATAAGCCCTCTGAGGCGCAGCTGGCGCAGGAback to top protein sequence of jgi.p|Trimin1|348407 >Trimin1|348407|estExt_Genemark1.C_Ctg_230136 ID=Trimin1|348407|estExt_Genemark1.C_Ctg_230136|Name=jgi.p|Trimin1|348407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=446bp MATLGKDKPSEAQLAQDWYATLGVTKDATDEAIQKSYRKLALKCHPDKNPback to top mRNA from alignment at Contig_23:1158896..1164078+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4989 ID=mRNA_4989|Name=jgi.p|Trimin1|348407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5183bp|location=Sequence derived from alignment at Contig_23:1158896..1164078+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_23:1158896..1164078+ >mRNA_4989 ID=mRNA_4989|Name=jgi.p|Trimin1|348407|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1338bp|location=Sequence derived from alignment at Contig_23:1158896..1164078+ (Tribonema minus UTEX_B_3156 )back to top |