mRNA_4983 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348406
Unique NamemRNA_4983
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348406 vs. uniprot
Match: A0A835Z131_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z131_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.290e-96
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1 
Query:    1 MLSTFYDAEALQEKLRALATEKEQLLREERHLLAKQQAADAGIAELKAKHQQLVLAKELHELAAAEAGRRARDRIMELELLNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTALDAVPRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEAERRGWESALRSDLEQQRSEGRERDDRDAWRQRLRRERARTAACRRHCDSARARLIARHGPLAVERAAFARAVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGARTLDWDAFVHAAEASMKVL 999
            MLSTFYDAEALQEKLRALATEKEQLLREERHLLAKQQAADAGIAELKAKHQQLVLAKELHELAAAEAGRRARDRIMELELLNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTALDAVPRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEAERRGWESALRSDLEQQRSEGRERDDRDAWRQRLRRERARTAACRRHCDSARARLIARHGPLAVERAAFARAVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGARTLDWDAFVHAAEASMKVL
Sbjct:    1 MLSTFYDAEALQEKLRALATEKEQLLREERHLLAKQQAADAGIAELKAKHQQLVLAKELHELAAAEAGRRARDRIMELELLNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTALDAVPRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEAERRGWESALRSDLEQQRSEGRERDDRDAWRQRLRRERARTAACRRHCDSARARLIARHGPLAVERAAFARAVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGARTLDWDAFVHAAEASMKVL 333
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BLAST of jgi.p|Trimin1|348406 vs. uniprot
Match: A0A835Z3H4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H4_9STRA)

HSP 1 Score: 714 bits (1842), Expect = 8.120e-258
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1 
Query:    1 MLVAGHYLCKRGRGSVTFSATYSSAQRAAVAATAAALGLVYSEDERGRAKVXXXXXXXXXXXXXXXXXXXXXXXXGDWGGGERRGSKGRRRDSEGENGSATVPHSALQGMESALDARTCKKLQQLAGTLPRERGGAYRVVCLRYQLGVCPNRPHDCTYAHFQANLHKIGRFKPLLDLVHAAEGSKKGPARVRNKPRSESLGEAVEANASAAAAEKGADTSGGGAAHRSRGSSVASQGEAETLLKFESLQVLELSNCSALEGVVGVECPSLLHLSVTGCRAFAAFDVDAHRVTXXXXXXXXXXXGWELSGKSLANVQVARLNGCRALPFKFFAALVDHCRHMRRLEICGAACEGGLTSSERVRQQYPGGKRDAMNSDHFSRVKSRAAPLRNLEKGRPRLDVVRTKNQLAARR 1233
            MLVAGHYLCKRGRGSVTFSATYSSAQRAAVAATAAALGLVYSEDERGRAKVXXXXXXXXXXXXXXXXXXXXXXXXGDWGGGERRGSKGRRRDSEGENGSATVPHSALQGMESALDARTCKKLQQLAGTLPRERGGAYRVVCLRYQLGVCPNRPHDCTYAHFQANLHKIGRFKPLLDLVHAAEGSKKGPARVRNKPRSESLGEAVEANASAAAAEKGADTSGGGAAHRSRGSSVASQGEAETLLKFESLQVLELSNCSALEGVVGVECPSLLHLSVTGCRAFAAFDVDAHRVTXXXXXXXXXXXGWELSGKSLANVQVARLNGCRALPFKFFAALVDHCRHMRRLEICGAACEGGLTSSERVRQQYPGGKRDAMNSDHFSRVKSRAAPLRNLEKGRPRLDVVRTKNQLAARR
Sbjct:    1 MLVAGHYLCKRGRGSVTFSATYSSAQRAAVAATAAALGLVYSEDERGRAKVXXXXXXXXXXXXXXXXXXXXXXXXGDWGGGERRGSKGRRRDSEGENGSATVPHSALQGMESALDARTCKKLQQLAGTLPRERGGAYRVVCLRYQLGVCPNRPHDCTYAHFQANLHKIGRFKPLLDLVHAAEGSKKGPARVRNKPRSESLGEAVEANASAAAAEKGADTSGGGAAHRSRGSSVASQGEAETLLKFESLQVLELSNCSALEGVVGVECPSLLHLSVTGCRAFAAFDVDAHRVTXXXXXXXXXXXGWELSGKSLANVQVARLNGCRALPFKFFAALVDHCRHMRRLEICGAACEGGLTSSERVRQQYPGGKRDAMNSDHFSRVKSRAAPLRNLEKGRPRLDVVRTKNQLAARR 411
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BLAST of jgi.p|Trimin1|348406 vs. uniprot
Match: D7G8C1_ECTSI (Hypothetical leucine rich repeat zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C1_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.050e-27
Identity = 118/372 (31.72%), Postives = 169/372 (45.43%), Query Frame = 1 
Query:  322 QGMESALDARTCKKLQQLAGTLPRERGGAY--RVVCLRYQLGVCPNRPHDCTYAHFQANLHKIGRFKPLLDLVHAAE-----------------------------GSKKGPARVRNKPRSESLGEAVEANAS---AAAAE--------------KGADTSGGGAAHRSR-GSSVASQGEAETLLKFESLQVLELSNCSALEGVVGVECPSLLHLSVTGCRAFAAFDVD-AHRVTXXXXXXXXXXXGWEL----------------SGKSLANVQVARLNGCRALPFKFFAALVDHCRHMRRLEICGAAC------EGGLTSSERVRQQYPGGKRDAMNSDHFSRVKSRA-APLRNLEKGRPRLDVVRTKNQ 1218
            QG+E  +D +T  KL++LA  LPRE G     R  C+R+    CPN   DC++AH   +  K  +FKPL+   HA E                              S+    R R        G    ++A+   AAA                +G + +GG A   SR   S    G A  +  F++LQ LE+ +C  L+ + G+ CP+L    VT CR  ++  ++ A  ++            WEL                S  SLA ++V  LN CR L  KF A LVDH +H+RRLEI GAA        GG  SS + +++   GKRD ++   F+R+  +A A L+ L+KGRP+L VVRTK +
Sbjct: 1205 QGLEFRVDGKTRDKLERLAAALPREPGRKKMGRPSCIRFLQDKCPNSARDCSWAHLPMHPPKTLKFKPLV--THAQEPVSASSXXXXXXXXXXXXXXXXXXXXXXXXSRSRSPRSRRPDGGRCGGNGAGSSATVFEAAAGRXXXXXXXXXXXXXXRGFERAGGTAGFESRRDGSRGGDGSAPEVC-FKNLQFLEIHSCPGLKRLEGIRCPALAVARVTACRELSSLGLEEAFVLSDLDLAGCVRLESWELPPPAPPGGNAASSGVASSASLAELRVVVLNYCRGLQAKFLAKLVDHAKHLRRLEIYGAAAVVGPHPHGG--SSSKTKKEQTAGKRD-LSRVEFNRLAGKATAILKGLDKGRPKLVVVRTKKE 1570
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BLAST of jgi.p|Trimin1|348406 vs. uniprot
Match: A0A6H5JVX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX9_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.680e-17
Identity = 66/186 (35.48%), Postives = 97/186 (52.15%), Query Frame = 1 
Query:  733 FESLQVLELSNCSALEGVVGVECPSLLHLSVTGCRAFAAFDVD-AHRVTXXXXXXXXXXXGWELS----------------GKSLANVQVARLNGCRALPFKFFAALVDHCRHMRRLEICGAAC------EGGLTSSERVRQQYPGGKRDAMNSDHFSRVKSRAAP-LRNLEKGRPRLDVVRTKNQ 1218
            F++LQ LE+ +C  L+ + G+ CP+L    VT CR  +   ++ A  ++            WEL                   SLA ++V  LN CR L  KF A LVDH +H+RRLEI GAA        GG   S + +++   GKRD ++   F+R+ ++A   L+ L+KGRP+L VVRTK +
Sbjct:  988 FKNLQFLEIHSCPGLKRLEGIRCPALAVARVTACRELSTLGLEEAFVLSHLDLAGCVRLEPWELPPPXXXXXXXXXXXXXXAASLAELRVVVLNYCRGLQAKFLAKLVDHAKHLRRLEIYGAAAVVGPHPHGG--GSNKTKKEQTAGKRD-LSRVEFNRLATKATTILKGLDKGRPKLLVVRTKKE 1170
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348406 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z131_9STRA2.290e-96100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|348406 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z3H4_9STRA8.120e-258100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G8C1_ECTSI1.050e-2731.72Hypothetical leucine rich repeat zinc finger prote... [more]
A0A6H5JVX9_9PHAE3.680e-1735.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1106471..1110943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348406|estExt_Genemark1.C_Ctg_230126
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-04_003230.1
TranscriptId348728
TrackFilteredModels1
ProteinId348406
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348406gene_4983Tribonema minus UTEX_B_3156 geneContig_23 1106471..1110943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348406Trimin1|348406|estExt_Genemark1.C_Ctg_230126Tribonema minus UTEX_B_3156 polypeptideContig_23 1106701..1110943 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4983_5exon_4983_5Tribonema minus UTEX_B_3156 exonContig_23 1106471..1106718 -
exon_4983_4exon_4983_4Tribonema minus UTEX_B_3156 exonContig_23 1107824..1108186 -
exon_4983_3exon_4983_3Tribonema minus UTEX_B_3156 exonContig_23 1108849..1108914 -
exon_4983_2exon_4983_2Tribonema minus UTEX_B_3156 exonContig_23 1109020..1109357 -
exon_4983_1exon_4983_1Tribonema minus UTEX_B_3156 exonContig_23 1110727..1110943 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4983UTR3_4983Tribonema minus UTEX_B_3156 three_prime_UTRContig_23 1106471..1106700 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4983CDS_4983Tribonema minus UTEX_B_3156 CDSContig_23 1110727..1110943 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4983 ID=mRNA_4983|Name=jgi.p|Trimin1|348406|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1232bp|location=Sequence derived from alignment at Contig_23:1106471..1110943- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGAGTACGTTCTACGACGCCGAGGCGCTGCAGGAGAAGCTGCGTGC
TCTCGCCACAGAAAAGGAGCAACTCTTGAGGGAGGAGCGCCACCTGCTGG
CAAAGCAGCAGGCTGCAGATGCTGGCATAGCCGAGCTCAAAGCCAAGCAC
CAGCAGCTCGTTCTTGCCAAGGAGCTGCATGAGCTCGCAGCGGCGGAGGC
TGGAAGGCGTGCCAGAGATCGCATCATGGAGCTGGAGCTGCTGAACGCCT
CCGCCGCCGCCGACCGGCCGCGCCTGCGCGCCGCTGCCGCCGCCGCGCGC
GCGCGCGCCGCCGCCGCCGCCGCCGCCCTCGCTGCTGCACGCACGGCGCT
CGACGCGGTGCCGCGGCGCTTCCGCCAGAGCGTCGCCGCGGCGCGCGCGG
AGGCGGCAAAGTTGAGCGCTGAGGCAGCGGCGCTGCGGGAGGCGGCGGCG
GAGGCGGCGGCGCGGCGCGGGGCGGCGGCGGCGGCGGCGCGCGCACGTGC
GGCGGGGCTGCGTGGCGCGCTTGACGCACTGCGTGAGGAGCTGGAGGAGG
CGGAGCGTCGGGGCTGGGAGAGCGCGCTGCGGTCTGATTTGGAGCAGCAG
CGCTCAGAGGGGAGGGAGCGGGACGATAGAGACGCATGGCGGCAGCGCCT
GCGTCGCGAGCGCGCGCGAACCGCCGCCTGCCGCCGCCACTGCGACAGCG
CACGCGCGCGTCTAATCGCGCGACACGGCCCGCTTGCCGTAGAGCGCGCA
GCCTTCGCACGTGCCGTCGCCGCCAGCACCGCCGCTGCCGCCGCGCAGCG
GCAGCCGCTCATGGCGCCGGTGCACGGCGGCGGCGCTGCCGCTGTCACCG
CGGCCGCGGCGGCGGCGGCGCTGCAGCTGCTTGCGGCGTCAGAGCGCGAT
GTGATCAGCGAGGTGGCGGTGGTGGCGGCGGCGGGGGGCGCGCGCACGCT
CGATTGGGACGCGTTCGTGCACGCTGCCGAGGCGTCTATGAAAGTGCTGT
AACCGCAGCACACTCTGCGCTGATGCGCTGTTGCTGTCGCTGAGGACTGC
AACCAGTCTGTAACGCATGCTGGGCGTTGAAACCCCCCAGCGCTCCCCAG
TTGTGAGCGCCTGAGCAGTGCCACCCACATTCTTCACACGCCAGGGCATG
CATTTGTCACAAGCCAGGGCAGGTACGTTGCCCATACCCATACATACCCC
CCCTCCCATACCCATGAAGTCACGGTTCAGCG
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protein sequence of jgi.p|Trimin1|348406

>Trimin1|348406|estExt_Genemark1.C_Ctg_230126 ID=Trimin1|348406|estExt_Genemark1.C_Ctg_230126|Name=jgi.p|Trimin1|348406|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=334bp
MLSTFYDAEALQEKLRALATEKEQLLREERHLLAKQQAADAGIAELKAKH
QQLVLAKELHELAAAEAGRRARDRIMELELLNASAAADRPRLRAAAAAAR
ARAAAAAAALAAARTALDAVPRRFRQSVAAARAEAAKLSAEAAALREAAA
EAAARRGAAAAAARARAAGLRGALDALREELEEAERRGWESALRSDLEQQ
RSEGRERDDRDAWRQRLRRERARTAACRRHCDSARARLIARHGPLAVERA
AFARAVAASTAAAAAQRQPLMAPVHGGGAAAVTAAAAAAALQLLAASERD
VISEVAVVAAAGGARTLDWDAFVHAAEASMKVL*
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mRNA from alignment at Contig_23:1106471..1110943-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4983 ID=mRNA_4983|Name=jgi.p|Trimin1|348406|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4473bp|location=Sequence derived from alignment at Contig_23:1106471..1110943- (Tribonema minus UTEX_B_3156 )
ATGTTGAGTACGTTCTACGACGCCGAGGCGCTGCAGGAGAAGCTGCGTGC
TCTCGCCACAGAAAAGGAGCAACTCTTGAGGGAGGAGCGCCACCTGCTGG
CAAAGCAGCAGGCTGCAGATGCTGGCATAGCCGAGCTCAAAGCCAAGCAC
CAGCAGCTCGTTCTTGCCAAGGAGCTGCATGAGCTCGCAGCGGCGGAGGC
TGGAAGGCGTGCCAGAGGTGCTGCTGTTTCTGGGTCGCACGAGGCGGGCG
CTGATGGGGCGAGGTCCAAACAGGATGTGCAACTTGCGTATCAAGGTGCG
CGAATGCTGTGCAGTAGAGACGCCGCTGCGCAAACAGCAGCAAACCACGC
TACACGCAGCTTACCCTACAAAAGCGTCTTTGTTGCGGTCGGGGAGACAG
CCCTGACTTTCATTGCCGTATGCCAGCTGTCGCTTTCAGCAAGCATTCCG
TATGTATATTTACCCGCTTGCTGCCAACAAAAACCTCGCGTATCACCCGC
GCACATGAGCTTCTGCTAGGCTTCTCGGCCAACGCTGACAGAAGTTGGTT
GGTAACGGTTGGATGCGAAGCCAGCCGGTCGATCAACCGGGCAACTGCGG
TCCAACTGAAGCAAATGCACAACACGCAGAGCGGAGAGTCTACAATGCCC
ATATTACTGACGTGCTGCTGCTGCACCGGGAAGTTTTCTTCGCGTAGAAT
CAACCAGTTGCGAGCAAGCGGCAGCGCACCACACACTTTTTGGTACACAA
ACAAACCCAACAGTGAATCCGTCGGCGGACCAGATCAACAGGCCTGTACT
CATTCTGGGCGCTTCCGGCTGGCAGTCTTTGCAGAAGCTATGAACGCATT
AGTTGCAAACTTCAAGCGGTACCTGTTTGCTGCTTCTTGCCTATGACCAG
CACCAAGTACCTCTTCGTTCCACAAAGCTTTGGCCTTGCGAAACAATTGC
GATTCGCGCAGTGGGGGCTGCAGCTGCTGCAGCAGCTGATGCTGTCGCTG
CTGCTGCATGCAGTAGCTCCACGTCCGCTTCGTATCATAGTGTCTACAGT
CATTGGAGAGCAAGATGCCATCAATTTGACGAGGCTGGCGAGCCACGTGT
ACACATTAAACAGGTTAACCGATGATAACCGGGGTTTATGCGATGATAAC
CGACGATGGCCAGTCAACCGGCTGACAATTGATCCAGATACCCGACAGGC
ATTGGTTACGGATACAAATACACCGCCTAGGATTCGGTCGGTAGACCGCT
CAGCGGACCAACATGACGAACGGACGCAGCCGCTCCAGCCAGGAAGCCTA
CATCTGCATGGCGCACACTGACAGGTGGAAACGCTATAGTCTGTGGCTTG
ATTGCGCTGGCGGAAGCGGCTCAATACTGCAGATCGCGTCATGCGCGTGC
AGATGCTCAGCGCCTCCCGCGCCATCAGCCATCAGCTTCACCGCGCGCTC
CTCATGACAAAGAACGCTGCACCTGTACGCACCTGCTCCTTCTTCTGCGC
TGCAGCGCCTCCGCGACCCGCACGCCCGACCCTCCAGCTACTGCCACCTC
ACCCCCCCCCCCCCCCCCCCACACACGCACACACAGATCGCATCATGGAG
CTGGAGCTGCTGAACGCCTCCGCCGCCGCCGACCGGCCGCGCCTGCGCGC
CGCTGCCGCCGCCGCGCGCGCGCGCGCCGCCGCCGCCGCCGCCGCCCTCG
CTGCTGCACGCACGGCGCTCGACGCGGTGCCGCGGCGCTTCCGCCAGAGC
GTCGCCGCGGCGCGCGCGGAGGCGGCAAAGTTGAGCGCTGAGGCAGCGGC
GCTGCGGGAGGCGGCGGCGGAGGCGGCGGCGCGGCGCGGGGCGGCGGCGG
CGGCGGCGCGCGCACGTGCGGCGGGGCTGCGTGGCGCGCTTGACGCACTG
CGTGAGGAGCTGGAGGAGGCGGAGGTGGGGGCGCTGTTGAAGTTGTGGTG
TTGAAGTTATGTTACGTCCAGAGAGCGAGCGCGTTGAGTAGCGATCGCGG
AGTGGCGCTTCCTTCGTTTGTGTGACAAGCGTCGGGGCTGGGAGAGCGCG
CTGCGGTCTGATTTGGAGCAGCAGCGCTCAGAGGGGAGGGAGCGGGTATC
GAGGGGCGGCTCGGCTTGCCACTTCTGCGATCACGGGGCAGTGCCTCCCG
CTGCACTGCGAGGCGAGACGAGGATGGCAGATGTAGGTGCCATGGTACAC
GATGGCACCAGCGGCGTCTGTGCAGCTTTTGCCGAATCCTCTGCGTGCGA
CCTAGATCTCGACGCCTCTGTCAATGTTGGCGATGCGCGTGCATTGCAGC
CGTCGCGGCTGCTGATAGCCAAGTGCTGGTGAAGCGCGAGTGACACACGC
GCTCTTTCCGTACCCTTGACTGCGTGCCAGCACGGCGTGCCAAGACTGCA
CAGGCATTGCTCAGCAGCAGCGCACAGAGCTGCCAGAGCAAGCTTTGGAG
AAGGCTTCACCAGCCCCTATGGCTGCTGCGCTGGCGGCAGCAGTGGGCAT
TGAGCCTCACTGCAATGCAGATGTAAATGCTATGTCAGCATGTGACAGGC
GCTTCCGCTCCCTGACTGTGGCACAGGAAGTGCTGCTGCAGGACAGCAGA
AACACATCGCAAAACGACAGCGCCACATGCACAATGACCATTTCGCTTGC
CGAACTCTCACTTGTCTGAGCTCTGAAACACCACGTACCGCACCACCCAT
GTACCGCACCAGCATGCTGAACAATCGACGCACACACACGCGCGTGCACT
CCTGCAGGACGATAGAGACGCATGGCGGCAGCGCCTGCGTCGCGAGCGCG
CGCGAACCGCCGCCTGCCGCCGCCACTGCGACAGCGCACGCGCGCGTCTA
ATCGCGCGACACGGCCCGCTTGCCGTAGAGCGCGCAGCCTTCGCACGTGC
CGTCGCCGCCAGCACCGCCGCTGCCGCCGCGCAGCGGCAGCCGCTCATGG
CGCCGGTGCACGGCGGCGGCGCTGCCGCTGTCACCGCGGCCGCGGCGGCG
GCGGCGCTGCAGCTGCTTGCGGCGTCAGAGCGCGATGTGATCAGCGAGGT
GGCGGTGGTGGCGGCGGCGGGGGGCGCGCGCACGCTCGATTGGGACGCGT
TCGTGCACGCTGCCGAGGCGGTTTTGAAAGAGGGGGGGGGGGGGGGGGCT
GGGACTGCTGTAGCGTCGATGTCAAATGGTGGAGTTGGACTGCAGACAGA
GTGCGTGTGATGGTACACGGGTGTGAGTTTGCCGCACGGTGACACTGGCC
GTGGTAGTTGCTGATGGCACCGCTGCGGCTCACGGTTTCTTGCTCTTTGA
CATGATCTGTATTGGCTGCTTTTGATCCTTGGTGACAGAACGTTTGCTCA
GGTCATGGCATACGAGATGTCAAAGTGCACAGGTGCATGCATGGCGCCCA
TATACTGGCACGCCATTGCCCTTGGATCATACATGCAAATGCATCCAGTG
ACCTGTTCTAAGCACATGCTAGCAAACGCACCACGGCCATGGATATGAGC
CCATTGCGAAGATAGACGCGAATTGCCAGTGGTGTGCAGGCCATGATTGG
CATTGGGCCATGCAGCAGCAGTGGTGGAAGCACGATTTGTGTGTCAGTCA
AGTTTCTACGAGCATTGGCTCACGTGCACTGATTGCCCGTACCACCTCCA
AAGCTACTCTTTGTGGCGTGAAATGTTGTTTCAGGAAGACACGACAGATA
CGGCTGCGGTAGGGGGCTGGGGATGACATCCACATGCTGGTTATCATGGT
TGACCGGTGTGTCACACAACGTGTGTGTGTGTGTCGTCTTTGGAGGACAA
CAAGGAATGGAATGAATGAAACATGGCAATCCGTGCAAGCCTTCTGGTGT
GTTGCGCATGTGGGTGCAAACATGCCACACAGCATACCATTGCATCTGTT
TGTGAACCAACTTAAAACATAAGCGCAATGTTGCAGAATATGCGCACACT
GCGTTCGGCGGCACTTGTTGCCACGTGCATATCCCATTTTCAGCATGCGT
GTACTGCTGCCACACCAATGGATGCGTGGTGATTAACACAACATGCCAGA
GCGCACATGACTATGAACAAACAAGAGCACGCCAAATGTTGTTTTGCCAC
CATGCACATGTGACCGCCGTGTACATTACACAGATCATGCATCATGTGGT
GTGTTTCTCTATGTGCTCGCGTGATGATCGCATGGTTGCGTGCATCACTG
TTCCGCCCCCCCCTGCCCCCCACAGTCTATGAAAGTGCTGTAACCGCAGC
ACACTCTGCGCTGATGCGCTGTTGCTGTCGCTGAGGACTGCAACCAGTCT
GTAACGCATGCTGGGCGTTGAAACCCCCCAGCGCTCCCCAGTTGTGAGCG
CCTGAGCAGTGCCACCCACATTCTTCACACGCCAGGGCATGCATTTGTCA
CAAGCCAGGGCAGGTACGTTGCCCATACCCATACATACCCCCCCTCCCAT
ACCCATGAAGTCACGGTTCAGCG
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Coding sequence (CDS) from alignment at Contig_23:1106471..1110943-

>mRNA_4983 ID=mRNA_4983|Name=jgi.p|Trimin1|348406|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1002bp|location=Sequence derived from alignment at Contig_23:1106471..1110943- (Tribonema minus UTEX_B_3156 )
ATGTTGAGTACGTTCTACGACGCCGAGGCGCTGCAGGAGAAGCTGCGTGC
TCTCGCCACAGAAAAGGAGCAACTCTTGAGGGAGGAGCGCCACCTGCTGG
CAAAGCAGCAGGCTGCAGATGCTGGCATAGCCGAGCTCAAAGCCAAGCAC
CAGCAGCTCGTTCTTGCCAAGGAGCTGCATGAGCTCGCAGCGGCGGAGGC
TGGAAGGCGTGCCAGAGATCGCATCATGGAGCTGGAGCTGCTGAACGCCT
CCGCCGCCGCCGACCGGCCGCGCCTGCGCGCCGCTGCCGCCGCCGCGCGC
GCGCGCGCCGCCGCCGCCGCCGCCGCCCTCGCTGCTGCACGCACGGCGCT
CGACGCGGTGCCGCGGCGCTTCCGCCAGAGCGTCGCCGCGGCGCGCGCGG
AGGCGGCAAAGTTGAGCGCTGAGGCAGCGGCGCTGCGGGAGGCGGCGGCG
GAGGCGGCGGCGCGGCGCGGGGCGGCGGCGGCGGCGGCGCGCGCACGTGC
GGCGGGGCTGCGTGGCGCGCTTGACGCACTGCGTGAGGAGCTGGAGGAGG
CGGAGCGTCGGGGCTGGGAGAGCGCGCTGCGGTCTGATTTGGAGCAGCAG
CGCTCAGAGGGGAGGGAGCGGGACGATAGAGACGCATGGCGGCAGCGCCT
GCGTCGCGAGCGCGCGCGAACCGCCGCCTGCCGCCGCCACTGCGACAGCG
CACGCGCGCGTCTAATCGCGCGACACGGCCCGCTTGCCGTAGAGCGCGCA
GCCTTCGCACGTGCCGTCGCCGCCAGCACCGCCGCTGCCGCCGCGCAGCG
GCAGCCGCTCATGGCGCCGGTGCACGGCGGCGGCGCTGCCGCTGTCACCG
CGGCCGCGGCGGCGGCGGCGCTGCAGCTGCTTGCGGCGTCAGAGCGCGAT
GTGATCAGCGAGGTGGCGGTGGTGGCGGCGGCGGGGGGCGCGCGCACGCT
CGATTGGGACGCGTTCGTGCACGCTGCCGAGGCGTCTATGAAAGTGCTGT
AA
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