mRNA_4948 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|162854
Unique Name	mRNA_4948
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A836CIL4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL4_9STRA)

HSP 1 Score: 1078 bits (2788), Expect = 0.000e+0
Identity = 585/585 (100.00%), Postives = 585/585 (100.00%), Query Frame = 1

Query:    1 MFIDDANLFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKADPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGAAVHHTHCSAATTLSTVNVAASGPGIVQGTASALAVPVHL 1755
            MFIDDANLFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKADPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGAAVHHTHCSAATTLSTVNVAASGPGIVQGTASALAVPVHL
Sbjct:    1 MFIDDANLFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKADPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGAAVHHTHCSAATTLSTVNVAASGPGIVQGTASALAVPVHL 585

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 9.020e-136
Identity = 261/543 (48.07%), Postives = 346/543 (63.72%), Query Frame = 1

Query:   22 LFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAEL-QGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASG 1635
            L D   I++ V   C+  + +G+VA VCG   V CWT AGERQ   +  AY+KA    D  WFD H  G++P    + M  +Q+ I RK A+ + NG+  +  L+ A   N +++ + L +LPLI     +  +  S +    + +YS AGAVA E    IRT AS C+E  ++ARY  H+ +AE A  K+ +Q G G A       LAY   F Y I QVS D+  GC +DCA+GG V+++V  V+ A++ L  +   + AL  A  +A  +F  I RVP +DA+S +G R  +   GAL +E V F YP+R +++V+  + LS+A GE+LALVGPSG GKS++ KL+LR YD ++G I LDG+DI++LN+ W R  IG+VGQEPVL +GSIRDNIA+G PGA + +II AAKAA+AH FI  FP GY TDVGE G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQ  LD++   K  TT+TIA RLST     RIAVI    V E+GT  EL A GG+Y  L  AQ  G
Sbjct:   29 LNDSTDIKTVVQGFCLVFLVVGIVASVCGFIFVLCWTIAGERQALRLKEAYVKAILRQDVGWFDEHPAGQLPSMVTSLMGKVQDGIGRKIADSMMNGAGSMGCLIAAFYLNPTLSAILLSALPLIGFAVGMVTKLMSKSTLEGQGHYSRAGAVANEVFAGIRTVASLCAEPWEVARYGRHLLSAEKAGIKNGIQNGLGKASMFSCFYLAYALAFWYGIKQVSDDLAAGCTEDCASGGKVISSVFGVLFASMQLGQMSPGITALGLARTSAVIIFETIRRVPPIDAFSTEGARPDKPPSGALRLEGVGFHYPARPDDVVYGRIDLSVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIKGFPKGYRTDVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLHELKRRTTITIAHRLSTIQNSDRIAVIANKGVAEIGTHAELTALGGIYSQLCKAQGGG 571

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 5.770e-134
Identity = 257/543 (47.33%), Postives = 342/543 (62.98%), Query Frame = 1

Query:   22 LFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGA 1638
            L D A +   V   C   + +G V+   G T V CWT +GERQ   +  AY+KA    D  WFD H  G++P    + M  +Q+ I RK A+ I N +  I  L+ A   N  ++ + L  LP +     L     S +    + +YS+AGAVA E    IRT AS C+E  ++ RY+ ++  AEAA  ++ LQ G G      +  LAY   F Y I QVS D+ DGC ++C TGG V++++  V+ A++ L  +   L AL  A A+A ++F  I+RVPA+D +S  G + A  +GAL I+ V F YP+R +E+V+  + +SI  GE+LALVGPSG GKS++ KL+LR YD ++G I LDG DI++LN+ W R  IG+VGQEPVL SGSIRDNIA+G PGA + +I  AAKAA+AH FI  FP GY T+VGE G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQ  LD+++  K  TT+TIA RLST     RIAV+    + E+GT  EL A GG+Y AL  AQ SGA
Sbjct:   29 LNDNADVLGVVSGFCTVFLVVGAVSFAGGFTFVLCWTMSGERQALRLKEAYVKAILRQDIGWFDEHPAGQLPSMVTSLMGKVQDGIGRKVADAIMNCASAIGQLIAAFYLNPVLSAILLCCLPAVGLSVGLVTMLMSKSTIEGQGHYSLAGAVANEVFAGIRTVASLCAEPWEVVRYSKYLVQAEAAGIRNGLQSGLGQGAVFMSFFLAYALAFWYGIKQVSGDLEDGCVENCQTGGKVISSIFGVLFASMQLGQMTPGLTALSLARASAVAIFKTIERVPAIDPFSDAGAKPATARGALHIDGVGFHYPARPDEVVYGRVDISIQEGETLALVGPSGGGKSTMTKLLLRFYDPTSGCIRLDGADIRSLNLNWYRQQIGYVGQEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIKGFPKGYGTNVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLQTLKRRTTITIAHRLSTIQNSDRIAVVANKGIAEIGTHAELTALGGLYAALCRAQGSGA 571

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 1.300e-120
Identity = 240/530 (45.28%), Postives = 322/530 (60.75%), Query Frame = 1

Query:   28 DPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVY 1605
            D   +   V + C+    +G+VA V G   VA W+ +GERQ   +   Y+K     D  WFD H  G++P A  ANMA +Q+ + RK  +++ NG   I+ LV  +I N  +  V L  +P I     +     S++ +    +YS AG VA E +  IRT AS  SE +++ RY  H+  A  A  K  +  G G  +   +  ++Y   F +   QV AD GDG      +GG V+  +  V+  ++        + AL  A  AA  VF V+DRVP +D+ S +G + A ++G +  + V FSYP+R  ++V+  LSL +A G++LALVGPSG GKS++ KL+LR YD ++G + LDG DIK+LNVAW R  IG+VGQEPVL +G+I  NIA+G  G+ + +II AAKAA+AH FI  FP GY+T VGE G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQA LD +   K  TTVTIA RLST     +IAVID G V ELGT  ELLA  GVY
Sbjct:   81 DEKTVLESVASFCILFGIIGLVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIVLNGLSGIALLVTGLIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATEVLSGIRTVASLNSEEIELKRYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQV-AD-GDG-----RSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIDSSSEKGLKPASVEGQVLFDSVGFSYPARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTITKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQRIGYVGQEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDELHKDKPRTTVTIAHRLSTIRGADKIAVIDKG-VVELGTHSELLALNGVY 602

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 1.310e-116
Identity = 241/530 (45.47%), Postives = 323/530 (60.94%), Query Frame = 1

Query:   28 DPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVY 1605
            D   I   V + C+    +G VA V G   V  W+ +GERQ   +   Y+K     D  WFD H  G++P A  ANMA +Q+ + RK  ++I NG   I+ LV  +I N  +  V L  +P I     +  +  S++ +    +YS AG VA E +  IRT AS  SE +++ RY  H+  A  A  K  +  G G  +   +  ++Y   F +   QV AD GDG      +GG V+  +  V+  ++        + AL  A  AA  VF V+DRVP +D+ S +G + A ++G +  + V FSYP+R  ++V+  LSL +A G++LALVGPSG GKS++ KL+LR YD ++G + LDG DIK+LNVAW R  IG+VGQEPVL +G+I  NIA+G  G+ + +IIAAA+AA+AH FI  FP GY+T VGE G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQA LD++   K  TTVTIA RLST     +IAVID G V ELGT  ELLA  GVY
Sbjct:   70 DEKTILESVTSFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGLVMLACVPFIGGSVAVLSKLMSSSTQEGNDHYSKAGGVATEVLSGIRTVASLNSEEIELKRYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQV-AD-GDG-----RSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIDSSSEKGLKPANVEGQVVFDSVGFSYPARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDKLHKDKPRTTVTIAHRLSTIRGADKIAVIDKG-VVELGTHSELLALNGVY 591

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 370 bits (950), Expect = 8.710e-111
Identity = 256/652 (39.26%), Postives = 345/652 (52.91%), Query Frame = 1

Query:   22 LFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKADPAWFDSH----------------------------------NPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFE---------------AIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFL-----------------------------YAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLL-----------------------------------DEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGA 1638
            L DP+ IQ  +   C+  V +G+++ V G   V  W+ AGERQ   +  +       WF +H                                    G++P    + MAS+Q+ I RK A+++FN +  +    VA   +  ++G+ L  LPLI   T +  +  + A  + +  Y  AGAVA E                   IRT AS CSE L++ARY   + A E    K  +  G G    +  L  +Y   F                              Y I QV+ D+G  C  DC TGG V++ V  V+ A+V L  L   L+AL +A  +AA++F  IDR PA+D++S +G R+   +GALS+E V F YP+R +  V++G+S+ +A GE+LALVGPSG GKS++ KL+LR YD ++G I LDG+DI++LN+ W R  IG+VGQEPVL +GSIRDNIA+G PGA + +II AAKAA+AH FI  FP GY+T+VGE G QLSGGQKQR+AIARAIIK P +LLL                                   DEATSALD+ESE+ VQ  LDR+   K  TT+TIA RLST     RIAVI    V E+GT  EL+A  G+Y  L AAQ+ GA
Sbjct:   64 LNDPSDIQGVIATFCIAFVLVGVISFVSGFVYVYTWSMAGERQALRLKESTYVG---WFHTHPADICVLLITAASLIAAATLAVCARQDVXXXXXXXXGQLPTLVTSLMASVQDGIGRKVADIVFNLTSCVGLFAVAFYLDPQLSGILLACLPLIGISTAVVTKLMTKAVSSGQGLYGAAGAVATEXXXXXXXXXXXXXXXVFAGIRTVASLCSEPLEIARYGKLLIAVEVEEVKKGMLTGVGVGTLMFLLFNSYALAFWSFGGDGTGEAVASGVAPAARQRRRRLRGRYGITQVADDVG--CTSDCKTGGKVVSAVFAVMTASVQLGQLSPGLMALSQARTSAAAIFKTIDRRPAIDSFSEEGARLEATRGALSVEAVTFHYPARPDAPVYEGVSVGVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIKGFPKGYNTEVGEGGLQLSGGQKQRVAIARAIIKDPAILLLEXXXXXXXXXXXXXXXILRVXXXXXXXXXXXXXLSDEATSALDSESEKVVQQALDRLHELKRRTTITIAHRLSTIQNSDRIAVIANRGVAEIGTHSELMALDGIYAQLCAAQSGGA 710

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 4.470e-109
Identity = 225/508 (44.29%), Postives = 300/508 (59.06%), Query Frame = 1

Query:  127 WTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGA 1638
            W  AGE+    +   Y++A    D  WFD H  GE+P A  + MA IQ+ + RK A++I N +  +++ ++A      +A V L   P I   T + +   + A      +YS AG VA E I SIRT AS  +E  +M RY+ H+  AE A  K                         Y    V+ DI        ATGG V+TT+  V+  A++L  +     AL +A  A   VF  ++RVP +DA S +G++  +++G L    V FSYP+R ++ V D +S+S++ GESLALVGPSG GKS++ KL+LR YD ++G + LDG D+K+LNV + R  IG+VGQEPVL +G+IRDN+AHG P A + +I+ AAKAA+AH FI  FP  Y TDVG  G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQ  LDR+      TTV IA RLST     RIAV+    + ELGT  ELLA  G+Y AL   +  GA
Sbjct:  135 WNTAGEQVALKLKKEYVRAILRQDIGWFDEHPAGELPSAVTSAMAKIQDGVGRKIADIIMNFTVFLATFIIAFTELPKLAAVLLACFPFIAISTFVLVTVVAKATGQGNNHYSKAGGVANEVIASIRTVASLTAEENEMDRYSGHLDGAEKAGIKXXXXXXXXXXXXXXXXXXXXXXXXWYGTKLVADDIXXXXXXXXATGGQVITTIFGVLIGAMSLGQMAPGATALGQAKQAGYRVFETLERVPPIDAASPEGSKPDKVEGRLEFREVGFSYPTRPDDKVLDSVSISVSPGESLALVGPSGGGKSTVTKLLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIKSFPDAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAEQGIAELGTHSELLAKNGIYTALCTIEGPGA 642

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BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A8K1CDD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDD6_PYTOL)

HSP 1 Score: 362 bits (928), Expect = 4.710e-108
Identity = 233/555 (41.98%), Postives = 323/555 (58.20%), Query Frame = 1

Query:    1 MFIDDANLFDPAAI--------QSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAF-GGVYCALRAAQ 1626
            +F D  N F+PAA+        QS+V    +  V LG+  I+C     ACW+  G RQ   I +AY+ A    +  WFD  +P E+    A +  +IQ+ I RK  + +   S  +  +++A +    +A + +  +PL+ A   L +R  S A +   ++Y  AGAVA E++ +IRT     S +  + +Y D +  +  A  K    VG+G  + L  +   Y     +    V+ D  DGC  +C  GG V+     ++   +AL      + A+  A AAA  VFAVI+R   +D  S  G ++  + G ++IE V F+YPSR E  V    SL+I AGE++ALVGPSG GKS++V L+ R YD  +G + LDGVD++ LNV WLR  +G VGQEPVL + SI +NI HG P A +  +I AAK A+A+ FI+ FP G+ T+VGE GAQLSGGQKQR+AIARAIIK P VLLLDEATSALD ESER VQ  LD++  A   TT+ +A RLST    ++IAV  GGR+ ELGT +EL+A  GG Y  L  AQ
Sbjct:   87 IFSDLLNSFNPAAVSDMDPHVFQSQVREVALNFVYLGVATIICCFLQAACWSLTGSRQAKRIRSAYVSAIINKEIGWFDLSDPMELSTRVADSSVTIQDGIGRKVGDGLNFFSMTVFGIIIAFVKGWKLALILMAFMPLLAAAASLSVRMLSRATQEGIESYGKAGAVAQESLSNIRTVQMFNSTNHFIKKYEDSLTISTIAGIKKGFAVGWGTGIMLFVMFCMYACGMFFGALFVANDRRDGCTDNCYDGGRVLVIFFGIMMGGMALGQAGPSVQAMFSARAAAYDVFAVINRKSLIDPLSEDGKKLNSVTGRITIENVSFAYPSRPEIKVCSNYSLTIEAGETVALVGPSGSGKSTVVSLLERFYDPLSGAVKLDGVDVRELNVRWLREQVGLVGQEPVLFATSIMENIRHGYPNATDEQVIEAAKMANAYTFITEFPDGFQTEVGERGAQLSGGQKQRIAIARAIIKNPPVLLLDEATSALDTESERIVQESLDKLLAASRRTTIIVAHRLSTIRNANKIAVHSGGRIVELGTHDELMAIEGGHYRLLVEAQ 641

[Close]

BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: A0A8K1FIN6_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIN6_PYTOL)

HSP 1 Score: 357 bits (917), Expect = 1.840e-106
Identity = 231/555 (41.62%), Postives = 322/555 (58.02%), Query Frame = 1

Query:    1 MFIDDANLFDPAA--------IQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAF-GGVYCALRAAQ 1626
            +F D  N F+P+A         +++++        +G   ++C    VACW+    RQ   I +AY+ A    +  WFD ++P ++    A +  +IQE + RK  + +  GS  IS +V+A+I    +A + +  +P I     L M+  S A +A  ++Y  AGA+A E++ +IRT     S S  + +Y D +  +  A  K    VG+G  +    +   Y     +    V+ D  D C  DC  GG V+T    ++  A+AL      + A+  A AAA  VFAVI+R   +D  S  G ++  + G ++IE V F+YPSR E  V    SL+I AGE++ALVGPSG GKS++V L+ R YD   G + LDGVD++ LNV WLR  +G VGQEP L + SI +NI HG PGA +  +I AAK A+A+ FI+ FP G+ T+VGE GAQLSGGQKQR+AIARAIIK P VLLLDEATSALD ESER VQ  LD++  A   TT+ +A RLST    ++IAV  GGR+ ELGT +EL+A  GG Y  L  AQ
Sbjct:   93 LFGDAINSFNPSAGAPTDPHEFRAQINKVSRNFALVGAAVVICCFLQVACWSLTASRQAKRIRSAYVSAIMNKEIGWFDVNDPMQLSTRVADSSVTIQEGMGRKVGDGLNFGSMAISGIVIALIKGWKLALILMAFIPFIAFTAFLAMKVLSRATQAGIESYGKAGAIAQESLSNIRTVHMFNSISHFVKKYEDALTLSTQAGIKKGFAVGWGTGLMFFTVFCTYACGMFFGALFVANDRRDECTHDCYNGGRVLTVFFSMIMGAMALGQAGPSVQAMFSARAAAYDVFAVINRKSLIDPLSDDGKKLDNVSGRITIENVSFAYPSRPEIKVCSNYSLTIEAGETVALVGPSGSGKSTVVSLLERFYDPLDGLVKLDGVDVRELNVRWLREQVGLVGQEPALFATSIMENIRHGCPGATDEQVIEAAKMANAYTFITEFPDGFQTEVGERGAQLSGGQKQRIAIARAIIKNPPVLLLDEATSALDTESERVVQESLDKLLAASRRTTIIVAHRLSTIRNANKIAVHSGGRIVELGTHDELMAIEGGHYRLLVEAQ 647

[Close]

BLAST of jgi.p|Trimin1|162854 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 8.950e-105
Identity = 231/539 (42.86%), Postives = 318/539 (59.00%), Query Frame = 1

Query:   34 AAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQMTCINTAYMKA----DPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNGSYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNYSMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGFGWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVVQAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQGALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKLILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIAHGLPGAQEAD-IIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRLAIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIARRLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASG 1635
            +++   V    V    +G+++ V G   V+ W+ AGE Q   +   Y+K     D  WFD H  G++P A  ANMA +Q+ + RK  + I NG   I+ L+ A++ N  +  + L  +PLI     +  +  S+                 + +  IRT AS  SE +++ RY+ H+  A AA  K  +  G G      A   +Y   F +   QV+    DG  +   TGG V++++  V+  A+ L      + A+  A  AA  VF  ++R P +D+ S  G +  +++G +    V FSYP+R  ++V++ LSL +A G++LALVGPSG GKS++ KL+LR YD ++G + LDG DIK+LNVAW R  IG+VGQEPVL +G+I  NIA+G  GA   D I+AAAKAA+AH FI  FP GY+T VGE G QLSGGQKQR+AIARAIIK P +LLLDEATSALD+ESE+ VQA LD++   K  TTVTIA RLST     +IAVID G V ELGT  ELLA  GVY  L ++Q  G
Sbjct:  117 SSVAETVQKFVVLFGVIGVLSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGLIMLGCVPLIGVTVAIVTQLMSST---------------TQVLSGIRTVASLGSEEIELKRYSTHLDGAYAAGVKEGVSTGLGNGALFMAFYSSYGLAFWFGTKQVA----DGGGR---TGGEVLSSIFAVLMGAMMLGQTAPGITAVGIARGAAVEVFETLERTPPIDSSSKDGLKPDKVEGKVVFHTVGFSYPARPNDVVYNSLSLEVAVGKTLALVGPSGGGKSTVTKLLLRFYDPTSGSVSLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIESFPDGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDQLHKDKPRTTVTIAHRLSTIQGADKIAVIDKG-VVELGTHSELLALNGVYHTLCSSQTGG 632

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|162854 vs. uniprot

BLAST of jgi.p|Trimin1|162854 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CIL4_9STRA	0.000e+0	100.00	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A836CGZ9_9STRA	9.020e-136	48.07	ATP-binding cassette, sub-family B, member 1A n=1 ...	[more]
A0A836CDG9_9STRA	5.770e-134	47.33	ATP-binding cassette, sub-family B, member 1A n=1 ...	[more]
D7FHL5_ECTSI	1.300e-120	45.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHL4_ECTSI	1.310e-116	45.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z4J1_9STRA	8.710e-111	39.26	ATP-binding cassette, sub-family B, member 1A n=2 ...	[more]
D8LS12_ECTSI	4.470e-109	44.29	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A8K1CDD6_PYTOL	4.710e-108	41.98	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A8K1FIN6_PYTOL	1.840e-106	41.62	Uncharacterized protein n=2 Tax=Pythium oligandrum...	[more]
D7FHL1_ECTSI	8.950e-105	42.86	ATP-binding cassette, sub-family B (MDR/TAP), memb...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_23	contig	Contig_23:741602..749489 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|162854\|e_gw1.23.220.1
KEGG TC	3.A.1.201
BRITE	ko00000,ko00001,ko01000,ko02000,ko04090,ko04147
KEGG Pathway	ko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226
KEGG ko	ko:K05658
EC	3.6.3.44
Description	ATPase activity, coupled to transmembrane movement of substances
COG category	V
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG1132@1\|root,KOG0055@2759\|Eukaryota
Evalue	2.16e-117
Seed ortholog	2880.D7FHL4
Hectar predicted targeting category	signal anchor
TranscriptId	163176
Track	FilteredModels1
ProteinId	162854

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162854	gene_4948	Tribonema minus UTEX_B_3156	gene	Contig_23 741602..749489 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162854	Trimin1\|162854\|e_gw1.23.220.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_23 741602..749489 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4948_1	exon_4948_1	Tribonema minus UTEX_B_3156	exon	Contig_23 741602..741784 +
exon_4948_2	exon_4948_2	Tribonema minus UTEX_B_3156	exon	Contig_23 742574..742867 +
exon_4948_3	exon_4948_3	Tribonema minus UTEX_B_3156	exon	Contig_23 743517..743692 +
exon_4948_4	exon_4948_4	Tribonema minus UTEX_B_3156	exon	Contig_23 744326..744680 +
exon_4948_5	exon_4948_5	Tribonema minus UTEX_B_3156	exon	Contig_23 746063..746213 +
exon_4948_6	exon_4948_6	Tribonema minus UTEX_B_3156	exon	Contig_23 747050..747138 +
exon_4948_7	exon_4948_7	Tribonema minus UTEX_B_3156	exon	Contig_23 748143..748290 +
exon_4948_8	exon_4948_8	Tribonema minus UTEX_B_3156	exon	Contig_23 749128..749489 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4948	CDS_4948	Tribonema minus UTEX_B_3156	CDS	Contig_23 741602..741784 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_23:741602..749489+
coding sequence from alignment at Contig_23:741602..749489+

spliced messenger RNA

>mRNA_4948 ID=mRNA_4948|Name=jgi.p|Trimin1|162854|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1758bp|location=Sequence derived from alignment at Contig_23:741602..749489+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCATAGACGACGCCAACCTCTTTGATCCAGCCGCCATCCAGTCTCG
AGTTGACAACACATGCGTCTTCCTGGTGGGCTTGGGCATGGTCGCGATCG
TGTGCGGTACGACTGCCGTGGCGTGTTGGACGGCAGCCGGCGAGCGGCAG
ATGACATGCATCAACACGGCTTATATGAAAGCGGATCCGGCGTGGTTCGA
CTCGCACAATCCAGGGGAGATTCCAGGCGCGTTCGCTGCAAACATGGCTT
CGATACAGGAGGCCATAACCCGCAAGGCAGCGGAACTCATCTTCAACGGC
AGCTATATGATATCGTCGCTCGTGGTGGCAGTGATTGGCAATGCCAGCAT
GGCCGGCGTGACGCTGGTTAGCCTGCCGCTGATTATAGCCGGAACAGTGC
TAGAGATGAGGGCTGCAAGCAATGCTCATCGGGCTGAGGAGAAGAACTAC
TCCATGGCCGGTGCAGTTGCATTTGAGGCAATCGGCAGCATTAGGACAGG
GGCCTCGCAGTGCAGTGAAAGCCTGGATATGGCCCGCTATAATGACCATG
TGGCAGCAGCAGAGGCTGCAACCTCCAAAAGCGCACTGCAAGTGGGGTTC
GGATGGGCCGTGCGTCTCTGCGCTCTCCAGCTTGCCTACATCGCCATATT
CTTGTATGCCATCGCCCAGGTCTCCGCAGACATCGGCGACGGCTGCGCGC
AAGACTGCGCCACCGGCGGCTCCGTCATGACCACAGTCATCTGCGTTGTG
CAGGCGGCCGTTGCCCTCTCGTCTCTGGTGCAGTGCCTGCTAGCGCTCAG
GAGGGCGTACGCCGCCGCAGCCTCTGTCTTCGCCGTCATAGACAGAGTGC
CTGCTGTTGACGCCTACTCGCTGCAAGGCACGCGCATTGCGGAGCTGCAA
GGTGCACTGAGCATAGAATTCGTCAAGTTCAGCTACCCATCTCGCGCTGA
GGAGATGGTGTTTGATGGCCTCAGCCTGAGCATCGCTGCAGGGGAGTCTC
TGGCACTGGTTGGCCCTTCGGGAGATGGCAAGTCTAGCCTCGTGAAGCTC
ATCTTACGGCTATATGACGCTTCTGCTGGACGCATCTGCCTGGATGGAGT
AGACATCAAGGCCCTCAATGTGGCATGGCTCCGCAACATCATTGGCCATG
TGGGTCAAGAGCCTGTGCTCTTGTCCGGCTCTATCAGAGACAACATTGCT
CACGGCCTGCCTGGAGCACAGGAGGCCGACATCATAGCTGCTGCCAAGGC
AGCAGATGCGCACGCCTTCATCTCGCGCTTCCCAGGTGGCTATGACACCG
ATGTGGGCGAGGAGGGTGCTCAACTGTCCGGGGGGCAGAAGCAGCGCCTG
GCTATAGCACGCGCCATCATCAAGAAACCAACTGTGCTGCTTTTAGATGA
GGCGACAAGCGCCCTAGACAACGAGAGCGAGCGCGCAGTGCAGGCAGTTC
TCGACCGCATCCGTGGGGCCAAGGCGCTGACCACAGTCACCATCGCACGC
CGCCTCAGCACGACAGACACTTGCAGTCGCATAGCAGTAATCGACGGTGG
CCGCGTAACAGAGCTGGGCACACGGGAGGAGCTCCTGGCCTTCGGCGGCG
TGTATTGCGCGTTGCGCGCAGCGCAGGCGTCTGGCGCAGCGGTCCACCAC
ACTCACTGCAGTGCTGCAACAACGCTCAGCACGGTGAATGTCGCTGCTTC
AGGGCCCGGCATTGTCCAAGGCACCGCATCAGCGCTTGCGGTGCCAGTGC
ACCTTTGA

protein sequence of jgi.p|Trimin1|162854

>Trimin1|162854|e_gw1.23.220.1 ID=Trimin1|162854|e_gw1.23.220.1|Name=jgi.p|Trimin1|162854|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=586bp
MFIDDANLFDPAAIQSRVDNTCVFLVGLGMVAIVCGTTAVACWTAAGERQ
MTCINTAYMKADPAWFDSHNPGEIPGAFAANMASIQEAITRKAAELIFNG
SYMISSLVVAVIGNASMAGVTLVSLPLIIAGTVLEMRAASNAHRAEEKNY
SMAGAVAFEAIGSIRTGASQCSESLDMARYNDHVAAAEAATSKSALQVGF
GWAVRLCALQLAYIAIFLYAIAQVSADIGDGCAQDCATGGSVMTTVICVV
QAAVALSSLVQCLLALRRAYAAAASVFAVIDRVPAVDAYSLQGTRIAELQ
GALSIEFVKFSYPSRAEEMVFDGLSLSIAAGESLALVGPSGDGKSSLVKL
ILRLYDASAGRICLDGVDIKALNVAWLRNIIGHVGQEPVLLSGSIRDNIA
HGLPGAQEADIIAAAKAADAHAFISRFPGGYDTDVGEEGAQLSGGQKQRL
AIARAIIKKPTVLLLDEATSALDNESERAVQAVLDRIRGAKALTTVTIAR
RLSTTDTCSRIAVIDGGRVTELGTREELLAFGGVYCALRAAQASGAAVHH
THCSAATTLSTVNVAASGPGIVQGTASALAVPVHL*

mRNA from alignment at Contig_23:741602..749489+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4948 ID=mRNA_4948|Name=jgi.p|Trimin1|162854|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7888bp|location=Sequence derived from alignment at Contig_23:741602..749489+ (Tribonema minus UTEX_B_3156 )
ATGTTCATAGACGACGCCAACCTCTTTGATCCAGCCGCCATCCAGTCTCG
AGTTGACAACACATGCGTCTTCCTGGTGGGCTTGGGCATGGTCGCGATCG
TGTGCGGTACGACTGCCGTGGCGTGTTGGACGGCAGCCGGCGAGCGGCAG
ATGACATGCATCAACACGGCTTATATGAAAGCGGTGTTGAACCAGGCAAG
TGCAAGTCGTGCTCGGCAGATAATTTTTCAAGCTGGATCTTGGCATACCT
TGGTAAGACGGTGCAACGTAGTTGAGAGTGCAAGTTGCCATTCATGGGCC
AATCATGCTTAATTTGTCTCTTTTCGGCAATCATGGAGCAAAATCGACCT
TGCCATTGTTGTGCCTTAGAAGTACGCTGTGGTATCCGACCCCTCTCATA
TTCTGTGAGATAGTTGAACGCATATGAGCCTCAAGGATGCTCCCAAGATG
CTGTTGTCTGAGAACGGATGGTAAAGATGATGCAGCAAGAGGGAGACAAT
CATTGAATGACACTTGTTTACATATCTGTGTTTGTCTCGACAATTTCTTG
CAATCGCGAGACCAACAATGCCGCGCATGTTGTAGGGTGAGTTGCAAACT
GTCCACGGGCGCAAGTGGCACAGCTGCAATGGTACCGTATATACTAGGCT
GTGCGGTGTTGTAAGCGCACAGATATGTACATGAGATGTGCTGAGCGGCC
ATCCTAGGGTGTGCGCATTCTGCTGTGTACGCCACTGTAGCCTGCCACGC
GTATGCTGTGCAGGGGATGCACTGAAATCAGCCCCCCTTTATGCAGTACC
CCCATCACCTTGCGTGGCCGTTGTACCACAATCAGGTTATGAAGATTTGG
GATATTAACCTATACAGCATGTGCATGAACCAGCGGTGGTCTCATCTATG
TGTCATTGCCCAACTGGCCCTTGAGCTCTCGTGACTCCTGGCTTCACCGC
TGATATGGATTTTCATCTGCAGGATCCGGCGTGGTTCGACTCGCACAATC
CAGGGGAGATTCCAGGCGCGTTCGCTGCAAACATGGCTTCGATACAGGAG
GCCATAACCCGCAAGGCAGCGGAACTCATCTTCAACGGCAGCTATATGAT
ATCGTCGCTCGTGGTGGCAGTGATTGGCAATGCCAGCATGGCCGGCGTGA
CGCTGGTTAGCCTGCCGCTGATTATAGCCGGAACAGTGCTAGAGATGAGG
GCTGCAAGCAATGCTCATCGGGCTGAGGAGAAGAACTACTCCATGGCCGG
TGCAGTTGCATTTGAGGTGGGCACTGAAGATGCCGCTCTGGTTATGGCAG
AGCTGAAAGTACAATGTTCACTGAGTGCGTGCTGCATATCCCCATCTATG
GGCGTGCTTCAGATCTTGTGCAAAGGGATCTTGCCGCCTCACAAGGCCCC
GCCTACATAGTGCTGCTCGCTTCTGTTTTGCTTAATGACGGGCGAACAGG
CAGCAAGCAGTCATCTGCGGGGCTGCGCATGGTACGCATTGACGCGCCTG
CACTGTGCTGCTCGAAGATCATACAGAGGGCGTTATCACTGTGCCACAAA
CAAAACTGATCAGAGTAGCCAACGAGCATAGCAGCTGCGTTGCGCCATTG
CAATGCAGGTGATCAGCAGTCGCAAGATATGATGCTGGCAGCACTTTCCC
CGACCCTACCCCTACCTGTTGTAACACTTGCCCACCGTGCCACCATTGCT
GGACTTGAGGGTGCCATTCGAGTGGCCTTGCGACGCAGCAAATTCCTCAA
GGTGACAGATGCACTTGCGTGCTTGCCACCGACGCGAGCCGCCTTATCCC
ATAGTGTGAACCAGCAAGCAGAACATTTACCTGCGCCACAGCTGATGGCC
CCGTACACAGTTCGGTGCAGCTTAGAGCGCTTTGTTTACTTTGCGTTTTG
TGTCTTGTAAAACAGGCAATCGGCAGCATTAGGACAGGGGCCTCGCAGTG
CAGTGAAAGCCTGGATATGGCCCGCTATAATGACCATGTGGCAGCAGCAG
AGGCTGCAACCTCCAAAAGCGCACTGCAAGTGGGGTTCGGATGGGCCGTG
CGTCTCTGCGCTCTCCAGCTTGCCTACATCGCCATATTCTTGTAAGTGCT
GGCAAAGTGCTGTGTCAATGTGAACTTAGGTGTATTGCCAAATTTGCTTT
GCGCATACATTCGCCCAATGGCAGGCTCAGGCTGGTGTATGAGACCTCCA
TGTACCCCTGCAACTCTTGAGCGACACTTGATCTGATGAGTGTTTTTTAT
TCTACCGCGGCCCTCTACATGCACTACCCATGTTGTCGTTCATTGACATT
CCGAATTTCCTCAACGCAACACGTAGTGGCTATCTCTGCGCTCATGGCTT
TGCGGCTCTGCTTGTGACCGTCCTCTTGTCGCTGGTTCCAATTCTTATTC
ATATCAATGATGTCAAAGGTAGGCAGGCCGGCGCTGGTGCACCTCTTCTA
GGGGCACGGAGCAGTTTTGTCAGAGCAGACAGCGCTGTGCCAAGAAGTGC
ACCGCAGCAGCAGCATCGGCTTGGAAGCATCTTTATGCCATGGGTTTCAC
ACAAGAATGACCTGCAATGAGGTCCGCACTATTTTGGCGTTACACGGGTC
CCCTCCAAGTGTACATGTTGGCTGCACCGACTTGGACCGAGGGCCATGTG
ACCACAGTAGCCGGCCAGGATTACAGCTGTAAGCGCTTCCTCCTGACGCG
TACCATTTGCATCATGCTTTCCAGGTATGCCATCGCCCAGGTCTCCGCAG
ACATCGGCGACGGCTGCGCGCAAGACTGCGCCACCGGCGGCTCCGTCATG
ACCACAGTCATCTGCGTTGTGCAGGCGGCCGTTGCCCTCTCGTCTCTGGT
GCAGTGCCTGCTAGCGCTCAGGAGGGCGTACGCCGCCGCAGCCTCTGTCT
TCGCCGTCATAGACAGAGTGCCTGCTGTTGACGCCTACTCGCTGCAAGGC
ACGCGCATTGCGGAGCTGCAAGGTGCACTGAGCATAGAATTCGTCAAGTT
CAGCTACCCATCTCGCGCTGAGGAGATGGTGTTTGATGGCCTCAGCCTGA
GCATCGCTGCAGGGGAGTCTCTGGCACTGGTGAGTTGCTGCTGTTTCTTG
CTCAGGTGGAGTTGTCAGACCACATTTTCACCATTCGCATGCAGACTGCT
GGCCAAGGTGCTGCGTCAGGGACACCTGCAAGCTTCAAAGCCCTGAGAGT
TGTGGTGCTGCATATGGCTTGCAGACGGACCAATTGCCACGATTGCTGTC
ATTGCAAGAATGACGGCTGCAAAAGCACGCTGGACTAGTGACCTTGTTGC
GGTGTTCTTGCTGGTGCAGCGGTCCATACTGTCATCTTGTTCCACCCGAG
TTAGAGCACTTGCCAATGATGCGGCTTCAGGATTGCTAAGTTAGTGGAAG
CTCTCCCATGCTCCGAGGTCTGCAATCCACACTTTTGTATTTAGGACTCA
ATGCTAGCAGGTTGGTGTCAGGTTTGACTAGCATTTCAATGTGTCAATAA
TGCACATAACAGCAGATTGCAGAGAGATCAAATGCATGATTGCTGCTGAT
GGGCAGCATATATGGCAGGCATCCAGAATCTCGCACCACTTGTCTAGCTC
TGCACGACCACTCCAGGCTGTCTCACACATTTTCATGCCAACTTGAGAAT
CTCGTAAACTGTTGTGAGTGTCTTCCTGCATTGGGCATGCATATGGGAAG
AACAATGCCAGTGCATGGCACAGGCAAAGAGGCCCTGGGGCAATTGTAGG
TGATTCACAGACGTTGTGTTGAATACAACAGCAATGTAATTGGTATCACT
GTCCACAGCAGACTTCAATGTGCTAGGGCAGGGTTGCTGAGTCATGAGTA
TTTAGAAGAATGTTTTAGCATGTGGAGCCGATCTCAAATAGTGCGTTTGG
ATGACAAAGCGCAGCTATAACGTCAAGCACCAACCAGGCATGACATTCAG
AAGAAGAAAGCTAACTGCAAAGCAGCGCCTGTTTTAACACATATCAACGC
ACATTTACTCAGCGCAGGAATGCCAGGCTTGGTGTTCAACCAGTGAACGC
TGCTAGCATGATATGACACATGCTTTCCGGCTGCATGTTTGCAGCACACC
AGCACCCTCTGTTGGGATGCTCACAAAAAACATTACGCATCAGTACTGGT
GACTATAGGTGAATTTGCCTGATCAGCAGTGCCATCTCTTGTGTTCTGTT
ACACAGATCTTCGTCGCAGCCCCAAGGCTGGTCAAAAAAAGCACTGGTCA
ATCGTTGTACATGGCAGCATCATGATGCATCATGATGTGAGGGCGAGACG
TGTTAACTTCAGCTTGAGTGCGCCCTGCACGTCCAGTCCTTGCAGTTTCA
CAAATTTCCACTATTAAAAGCTTAGTGCTGGGCAACTATTCATGGAAATT
GCGGTCTTGCTCACCCCATGATAACCCTAAGCCCGCCCGCAACCCTAATG
CTCTTCCCAAGGTTGGCCCTTCGGGAGATGGCAAGTCTAGCCTCGTGAAG
CTCATCTTACGGCTATATGACGCTTCTGCTGGACGCATCTGCCTGGATGG
AGTAGACATCAAGGCCCTCAATGTGGCATGGCTCCGCAACATCATTGGCC
ATGTGGGTCAAGGTAAGAATGGACATCTCTGTGACTCACTTGACAATCTA
GCCGCCTCGCTTTCGGTCTTGGTTTGGCTGTGCAAGTAGTAGACTGAGTG
ATGATTGCTGCGCACAATGACCTATCGTACCTTCAGCTACAGTAGCAAGT
CAGGCATCGGTCAGCTGGCATGATCGCCCACGCGATGCAGATACATCAAA
TGTGAGCTCCAGCCACTTGGAGCCACTCTGTACAGCCAAAGTTGTCGCGA
AACGTCGAGAGAAATGCTGAAATTGATCATAAAGGAGCAGCCAAATTTCA
TGCTGGCCTTTGGCGATCGGTGAAAGGACCAGAATAACAACTCTATTTAC
AAATTGCACAAGCCCTTCGTGCTAATAAGCTGGCGCGGACAAACCTAGAG
GGCGCAAGCAGCTCCCATGGTCGGATGGCATTGTGACTTGCGCTGCGGTT
GCGGTGCCAACTTTTGGCCGGTGGAATTGCCATTGTTGACATTGCTTTGG
GGCTGATGCATGCGCTGCCTCTGGTACACTGGTAGGCCACGCTGAATGAA
ACCCCATGCTCGATCTGATCACAATGCTTGTGGTTCACGCCTCACAAAAG
AGGCACAGAGCATTCAAAGCAGATCTGAATGTGCTCGTGAAGAATCAAGT
GGATCTTACAAATCCTATGTGATCAGTGTGCACATGGACCAGGTGGCACA
CGCATCCTTGACAAAAACCTGGAACTGAGTGCCGCTCGGCAATGTCACTT
TGGGGGGCTGGCTGAGCATACATATATTTATCACTGGTCAGGAATTTTTA
ACCTGTGGGTCATTGCTGCCATGGGTGCCCCTCTACCCACACTTGCAGAG
CCTGTGCTCTTGTCCGGCTCTATCAGAGACAACATTGCTCACGGCCTGCC
TGGAGCACAGGAGGCCGACATCATAGCTGCTGCCAAGGTAGGCATCGACA
TTGCTGATTTTTTTGCATTTTGCACCTCCACTGGAGTTCATGTATTCATT
CATATCCTTTCTGGGGCATGTGCTTTGACTGTACTACCCTGCAGCAGGCT
GGATCGCTGCGCCTGTACTGTGCACAATTAAGTTCCTTCATGATGACCTC
ACTGCACTATGTGTGTGCTGAACGCACAAAGAGTTGAATGCGTAGAGTGA
CTAATGGCATGAACAGTTTGCAGCATAGGTCCACCTTTAGACTGTGTCCT
CATGGCGTGGTTCAACAGGCATGCTCAGTAGCATCTGGTGGTCGCAAAAC
TTGAGTGGAATCTGACTCTCTGACTCAAAATTAAATCTACATTGCACGGG
CCTTATTTGGAACAAACTTAGAGGTACAAAAAGCACCGTGGCAGCTCTAG
AGTAGGAAACAAGGCGGATTAATGCAGAGATAGCAGGACAGCCCGTATCG
CGAGAAGGTGATTGTTGTCCAGGTACTATAGGTGCAGGCAAAGAAATAGC
CCTGAACCAGGTCTGGATCAGTACTGGACTGATATGATATGCCAAATTAT
GCAGTGGCAGACTTTAGTATACTTAGACAATATGAGCAACTCAACAATGG
GGAGCCTGTGCGGAATATGTAGGCTCAGCCAATGCATGGTAGTAGATAGG
TGTCAGACTCCACCGGTACTTGCTTGAGATTGGTTTGCACTCCAATGGAG
CATCATGTGGTCTGAGCATATCTGCGCTCTAATGGAGCGCGAAGTGGTCT
GAGCAGCGACTGAGCGGCTGGCATCATGCCACCCTAGAAGGTGGAAGCCA
AGCTCAGCACAGGTCACAAGCGCATCCTGATGCAGTGTTGCAAGCTGCAT
CTCAAGCTGGTGCTATATGCTCAATCATACACCATTAAAACCGTTTTTTC
AAAAGCTGCGGCAGCGGACATTCAATCCGTCTGTGATGTGCTTGTGTGTT
TTTTTCTTCACTTTGTTGAACCTGTCACTTGTGCGTGCCAGGCAGCAGAT
GCGCACGCCTTCATCTCGCGCTTCCCAGGTGGCTATGACACCGATGTGGG
CGAGGAGGGTGCTCAACTGTCCGGGGGGCAGAAGCAGCGCCTGGCTATAG
CACGCGCCATCATCAAGAAACCAACTGTGCTGCTTTTAGGTGGGTGCAAC
TATGCATGTTTTGAACGCTTTTTATTTTATTTCACTAGAGGGACAGCTGA
TGCTGCAAGTGGTATTTGTTGAAGAATTCAGCCACAAGCTACCGATTTCG
ACCTGTGAAGGTAGCAAATCAACTGGGGTAGGCTGGGCCACCTCCTGTGC
TTCCATTTGGAGCATGGTGGAAAACATGCTTGCCAGTGCTGCTGTTGTTG
TGTGTGCTGCTTGAACACCTCTAGTGAGCAGCATGATGCTGGTGTTGCTT
GCGTGGCGCATGCTGGTGTGCACAAACTCCCACTGACAGTGGCAGCACCG
CTTTGGCATCCAGTCAGGGTAAGTGTGTCTTGTTGATTTGGCTTCTCTGA
AGTAATTACTGTTGCTCACTTATGGTCACAACTCGCTTGGGATAGGGCAC
GTGCCCTGTTTTGAGCACTTGCTTCAGGATTGCGTTCAAGTGGCACGCGA
AGTTAACAACCTGCAGCACAACCGATACATACAATTAGGAGTACTCTTGG
TGGCACATCTCTGTATCACCTGCATGCCAATGACCCTGTTTATAACACTG
CTTGATTCAAGCTGCTTGAATCAAGGCATCACTCTGTGAGCTTGAGCAAG
CGCCTTGAGATCTTCGACGACCTGCTTATCATCAGATGCTGTGCTGGAGG
TGCCTCGTGCTTTTGCATGTATGAGCTGCAAATATCACGAGATATTGAAT
TGACCTGCAAAACATCACTGCGTGCACATCACCTTTTCGCGCTGCGGGAA
TCGGCTGTCGGTGCACATCAGCCCCATGTTACTGGAAATGAACACTCGTT
TCCGTGCACGTTGACGCTGACCACAGATGAGGCGACAAGCGCCCTAGACA
ACGAGAGCGAGCGCGCAGTGCAGGCAGTTCTCGACCGCATCCGTGGGGCC
AAGGCGCTGACCACAGTCACCATCGCACGCCGCCTCAGCACGACAGACAC
TTGCAGTCGCATAGCAGTAATCGACGGTGGCCGCGTAACAGAGCTGGGCA
CACGGGAGGAGCTCCTGGCCTTCGGCGGCGTGTATTGCGCGTTGCGCGCA
GCGCAGGCGTCTGGCGCAGCGGTCCACCACACTCACTGCAGTGCTGCAAC
AACGCTCAGCACGGTGAATGTCGCTGCTTCAGGGCCCGGCATTGTCCAAG
GCACCGCATCAGCGCTTGCGGTGCCAGTGCACCTTTGA

Coding sequence (CDS) from alignment at Contig_23:741602..749489+

>mRNA_4948 ID=mRNA_4948|Name=jgi.p|Trimin1|162854|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1758bp|location=Sequence derived from alignment at Contig_23:741602..749489+ (Tribonema minus UTEX_B_3156 )
ATGTTCATAGACGACGCCAACCTCTTTGATCCAGCCGCCATCCAGTCTCG
AGTTGACAACACATGCGTCTTCCTGGTGGGCTTGGGCATGGTCGCGATCG
TGTGCGGTACGACTGCCGTGGCGTGTTGGACGGCAGCCGGCGAGCGGCAG
ATGACATGCATCAACACGGCTTATATGAAAGCGGATCCGGCGTGGTTCGA
CTCGCACAATCCAGGGGAGATTCCAGGCGCGTTCGCTGCAAACATGGCTT
CGATACAGGAGGCCATAACCCGCAAGGCAGCGGAACTCATCTTCAACGGC
AGCTATATGATATCGTCGCTCGTGGTGGCAGTGATTGGCAATGCCAGCAT
GGCCGGCGTGACGCTGGTTAGCCTGCCGCTGATTATAGCCGGAACAGTGC
TAGAGATGAGGGCTGCAAGCAATGCTCATCGGGCTGAGGAGAAGAACTAC
TCCATGGCCGGTGCAGTTGCATTTGAGGCAATCGGCAGCATTAGGACAGG
GGCCTCGCAGTGCAGTGAAAGCCTGGATATGGCCCGCTATAATGACCATG
TGGCAGCAGCAGAGGCTGCAACCTCCAAAAGCGCACTGCAAGTGGGGTTC
GGATGGGCCGTGCGTCTCTGCGCTCTCCAGCTTGCCTACATCGCCATATT
CTTGTATGCCATCGCCCAGGTCTCCGCAGACATCGGCGACGGCTGCGCGC
AAGACTGCGCCACCGGCGGCTCCGTCATGACCACAGTCATCTGCGTTGTG
CAGGCGGCCGTTGCCCTCTCGTCTCTGGTGCAGTGCCTGCTAGCGCTCAG
GAGGGCGTACGCCGCCGCAGCCTCTGTCTTCGCCGTCATAGACAGAGTGC
CTGCTGTTGACGCCTACTCGCTGCAAGGCACGCGCATTGCGGAGCTGCAA
GGTGCACTGAGCATAGAATTCGTCAAGTTCAGCTACCCATCTCGCGCTGA
GGAGATGGTGTTTGATGGCCTCAGCCTGAGCATCGCTGCAGGGGAGTCTC
TGGCACTGGTTGGCCCTTCGGGAGATGGCAAGTCTAGCCTCGTGAAGCTC
ATCTTACGGCTATATGACGCTTCTGCTGGACGCATCTGCCTGGATGGAGT
AGACATCAAGGCCCTCAATGTGGCATGGCTCCGCAACATCATTGGCCATG
TGGGTCAAGAGCCTGTGCTCTTGTCCGGCTCTATCAGAGACAACATTGCT
CACGGCCTGCCTGGAGCACAGGAGGCCGACATCATAGCTGCTGCCAAGGC
AGCAGATGCGCACGCCTTCATCTCGCGCTTCCCAGGTGGCTATGACACCG
ATGTGGGCGAGGAGGGTGCTCAACTGTCCGGGGGGCAGAAGCAGCGCCTG
GCTATAGCACGCGCCATCATCAAGAAACCAACTGTGCTGCTTTTAGATGA
GGCGACAAGCGCCCTAGACAACGAGAGCGAGCGCGCAGTGCAGGCAGTTC
TCGACCGCATCCGTGGGGCCAAGGCGCTGACCACAGTCACCATCGCACGC
CGCCTCAGCACGACAGACACTTGCAGTCGCATAGCAGTAATCGACGGTGG
CCGCGTAACAGAGCTGGGCACACGGGAGGAGCTCCTGGCCTTCGGCGGCG
TGTATTGCGCGTTGCGCGCAGCGCAGGCGTCTGGCGCAGCGGTCCACCAC
ACTCACTGCAGTGCTGCAACAACGCTCAGCACGGTGAATGTCGCTGCTTC
AGGGCCCGGCATTGTCCAAGGCACCGCATCAGCGCTTGCGGTGCCAGTGC
ACCTTTGA