mRNA_4944 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163085
Unique NamemRNA_4944
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A836CH17_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH17_9STRA)

HSP 1 Score: 641 bits (1654), Expect = 2.170e-232
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
Query:    1 MSAEQTAVTAEEEPLESNEPAPATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            MSAEQTAVTAEEEPLESNEPAPATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT
Sbjct:    1 MSAEQTAVTAEEEPLESNEPAPATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 323          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: D8LBB0_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB0_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.230e-124
Identity = 187/306 (61.11%), Postives = 235/306 (76.80%), Query Frame = 1
Query:   55 EPAPATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQ-VASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            EPAP+TF QCI+QA  A   A +DG+ LVEVEFPPL  D++ED+ SSAYD+S ANVRLAS+F + F+ EGK VS+LLPDE EL++A +DEG  E+   V L T RS+ K TA +LD +F  F G  +G + PI  TD+YVA++FSCQELPDL++L++  P+  IVFFNL+LD+ RGDLGLPAFPPKSLHY+FLSQIKPVYLLRTRAYS+++++ P+LVNYQGAQFRVYPG YQ LLD+GS RYK+V  +  R +LG FKD +T AL+LD+ E   V SFFRKG+K  TWWE+      E S NWR+
Sbjct:   20 EPAPSTFEQCIRQAQGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALFMSFVGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRVSNSPKRQSLGDFKDEITKALKLDEEEDNAVTSFFRKGFKNKTWWEE--GGEEEKSTNWRS 322          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7S2FWU4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWU4_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.790e-101
Identity = 154/279 (55.20%), Postives = 189/279 (67.74%), Query Frame = 1
Query:  136 LVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVV-PIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            ++E+EFPPL  DFME    SAYD+S ANVRLA  F + F+ EGKRV+++ PD  E +RA+E  G DE F  + L        GT  S   I  G FG + G  V  +P+ DMY+ ++FS QELPDL  LH ADP KP+V  NLKLD+ RGDLGLPAFPPK L Y FLSQ+ PVY LRTR YSKS+ +PP+LVNYQGA FR +PG +QS+LD+G  +Y++V     RPALG FK  L  AL L D EG+V +FFR+GYKT TWWED K    EL   WR+
Sbjct:    1 MMEIEFPPLPTDFMESPECSAYDVSSANVRLAIDFAKSFATEGKRVAIMFPDRAESDRAIETHGADEPFTNIILRPLAGPAPGTTSSPVDIVMGLFGKQGGRNVNAVPDADMYICLVFSAQELPDLEALHMADPSKPLVMMNLKLDTLRGDLGLPAFPPKDLQYRFLSQVLPVYYLRTRTYSKSITKPPFLVNYQGALFRAFPGGWQSMLDVGGGKYRRVKLADERPALGVFKVDLGEALDLGD-EGKVNTFFRQGYKTSTWWEDAKE--EELHSIWRS 276          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: K8YSK6_NANGC (DUF1995 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSK6_NANGC)

HSP 1 Score: 305 bits (780), Expect = 9.910e-99
Identity = 151/303 (49.83%), Postives = 206/303 (67.99%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFG-GKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            P+TF +C  QA  AA  AI+DGYKL+EVEFPPL    M   +SSA  I  AN+ LA++  ++F  EGK+V +L+PD+ EL+   E  GT    P V +   R+    +A ++ ++  G F     G+V+P  N D+Y+++I S QELPDL  LH+ADP KP++FFNL L++ RGDLGLPAFP K LHY FLS IKPVYLLRTR Y+++L+RPP+++NYQGA FR YPG YQ +LD G+ RY++V  ++ RPAL  FKD +T AL ++D +    +  R+G  + TWWE E+ +  E SDNWRT
Sbjct:   75 PSTFFECTLQAYNAAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLANEMAQYFVREGKQVVILVPDKDELDLIEEGLGTLSPSPNVTIRAVRARNSESADTMGELILGIFSRAAKGKVLPWYNADIYISVISSGQELPDLEALHQADPTKPLIFFNLNLETHRGDLGLPAFPSKDLHYRFLSNIKPVYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSRERPALSGFKDIITQALDVEDND--TLASLRRGAFSKTWWEKEEGWAKESSDNWRT 375          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7S1ZIG6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIG6_TRICV)

HSP 1 Score: 299 bits (766), Expect = 4.230e-97
Identity = 156/309 (50.49%), Postives = 206/309 (66.67%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNI---KGTAQSLDQIFSGFFGGKS-GEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQ---LDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            P +F Q    +A+AA  AI DG+KL+EVEFPPL    +E    SAYDI++ANV LA  F + F+  GKRV+++LPDE E E AV+ +GTD  +P V +++ R +    K      DQ+F   FGG S G V  +  TDMY+ ++ S QELPD+ +L E +P+K IVF+NLKLD  RGDLG PAFP K     FLS +KPVY LRTR YS+S ARPP++VNYQG  FR YPG +Q+LLD G+ RY++V  +  RPALG FK+ LT AL+   + + EG+  +F R GYKT TWWE+E+      SD+W+T
Sbjct:   35 PESFYQLQINSARAAQLAIDDGHKLIEVEFPPLPAQVLEMDDVSAYDIAKANVNLAVDFAKSFAQNGKRVTIMLPDEAEAEIAVDSQGTDAPYPGVAISSLRRSEGEEKDRVFKPDQLFLNLFGGGSQGSVKAVEGTDMYIILVASAQELPDVEELSELEPDKTIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSSVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQFQTLLDTGNGRYRRVKGSAIRPALGEFKEELTDALREQGIIEEEGKTLNFLRTGYKTTTWWEEERE---NASDSWKT 340          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7S4QDH7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QDH7_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.280e-96
Identity = 155/309 (50.16%), Postives = 210/309 (67.96%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDEL-FPRVKLTTARSNIKGTAQSL--DQIFSGFFG-GKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLD---DGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            P +F Q   Q+A+AA  AI DG++LVEVEFPPL    +E    SAYD+S+AN++LA  F + F+ + K+V++LLPDE E   A++D G  ++ +P VK+++ R + +   +S   +QIF   FG G  G V  + + DMYV I+ S QELPD+ +L   +PEKPIVF+NLKLD  RGDLG PAFPPK     FLS++KPVY LRTR YS+S   PP+LVNYQG  FR YPG +Q+LLD GS  Y++VG ++ RPALG FK+ LT+AL+++   + EG+   F R GYKT TWWE+E+      SD W+T
Sbjct:   66 PQSFYQLQIQSARAAKLAIDDGFRLVEVEFPPLPASVLEMDDVSAYDVSQANLKLAIDFAKSFAQDNKKVAILLPDEAEANIAIDDLGLSDVPYPGVKISSLRKSDEDDDRSFKPEQIFLSLFGQGSGGTVKAMEDVDMYVCIVASAQELPDIEELSLLEPEKPIVFYNLKLDVLRGDLGAPAFPPKDFQDRFLSRVKPVYYLRTRQYSRSTPNPPFLVNYQGCLFRSYPGQFQTLLDTGSGNYRRVGGSEIRPALGQFKEELTNALEIEGVIEEEGKTLKFLRTGYKTTTWWEEERE---NASDLWKT 371          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7S4IJG4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJG4_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.750e-96
Identity = 156/309 (50.49%), Postives = 209/309 (67.64%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSL---DQIFSGFFG-GKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQ---LDDGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            PA+F Q    +A+AA  A+ DGY+L+EVEFPPL  + +E    SAYD+++AN+ LA  F + F+   KRV+++LPDE EL  A+ED+GTD  +P V +++ R +     + +   DQ+F   FG G SG V  +  TD+YV I+ S QELPD+ +L E +P K IVF+NLKLD  RGDLG PAFP K     FLSQ+KPVY LRTR YS+S ARPP++VNYQG  FR YPG YQ+LLD G+ RY++V     RPALG FK+ LT AL+   + + EG+  +F R GYKT TWWE+E+    + SD+W+T
Sbjct:   72 PASFYQLQIDSARAALLAMDDGYRLIEVEFPPLPANVLEMDDVSAYDVAKANLNLAIDFAKSFAQNNKRVTIMLPDEDELGIALEDQGTDTPYPGVTVSSLRRSEGEEKERVFKPDQLFLNLFGTGSSGSVKAMEGTDVYVCIVASAQELPDIEELSELEPNKTIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSQVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQYQTLLDTGNGRYRRVLGNVVRPALGEFKEQLTDALREQGIIEEEGKTLNFLRTGYKTTTWWEEERE---DASDSWKT 377          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7R9UGE1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGE1_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.880e-91
Identity = 155/304 (50.99%), Postives = 192/304 (63.16%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGE--GQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            P +F +CI QA  A   AI+DGY LVEVEFPPL V  +ED SSSA DI +ANV L   F + F+++ K V +L PD  E  RA E  GT    P V++ + R     TA S DQ+  G FG ++GE+        ++ + FSCQELPDL +LH+  P+ PI+ FNLKLDS RGDLGLPAFPP+ LH  FLS+ KP YLLRTR+Y+ SL RPP++++YQGA FR YP  +Q+LLD+G  RYK V     RPALG FKD LT  LQL + E    V    RKG    TWWE  +    E S  WRT
Sbjct:   44 PGSFSECISQAQAAVKGAIEDGYTLVEVEFPPLPVALLEDVSSSADDIMKANVNLGLDFAQVFALD-KTVKLLYPDTFEATRAKEILGTTSPGPNVEIHSMRKTAASTATSFDQLLGGIFGKRAGELDLPEKAGYFICLGFSCQELPDLEELHKTYPDVPIIGFNLKLDSARGDLGLPAFPPRDLHNRFLSRWKPSYLLRTRSYALSLPRPPFVLSYQGALFRSYPEPFQTLLDVGDGRYKAVDVADARPALGEFKDILTQNLQLGENEDTNSVLGKLRKGVVNKTWWE--RLSDDEESTEWRT 344          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A7S0PW18_9STRA (Hypothetical protein n=2 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PW18_9STRA)

HSP 1 Score: 286 bits (732), Expect = 5.400e-91
Identity = 150/312 (48.08%), Postives = 205/312 (65.71%), Query Frame = 1
Query:   55 EPAPATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEG-TDELFPRVKLTTARSNIKGTAQSL--DQIFSGFFGGKSGEVVP-IPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLD---DGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            EP P++F +      +AA  A+ DG KL+EVEFPPL  + +E    SAYD+++AN++LA  F + F+ EGK+V+VLLPDE E   A+E+ G TD  +P V +++ R + +   +    +Q+    FG  SG +V  IP+T+MYV I+ S QELPD+ +LH  DP+  IVF+NLKLD  RGDLG PAFP K     FLS++KPVY LRTR YS+S   PP++VNYQG  FR YPG +Q+LLD G+ +Y++V     RPALG FK  LT AL+++     EG+   F R GYKT TWWE+E+      SD+W+T
Sbjct:  104 EPPPSSFYELQLNCVRAAKLAMADGNKLIEVEFPPLPANVLELDDVSAYDVAQANLKLALDFAKNFAQEGKKVAVLLPDEAEANIAIENNGGTDNPYPDVTISSLRRSDENDERIFKPEQVLLSLFGNGSGGLVKVIPDTNMYVCIVASAQELPDIEELHGLDPDATIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSEVKPVYYLRTRQYSRSTPNPPFMVNYQGCLFRSYPGQFQTLLDTGNGKYRRVEGNSVRPALGEFKQQLTDALKVEGILQEEGKTLDFLRTGYKTTTWWEEERE---NASDSWKT 412          
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Match: A0A6U0L276_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0L276_9STRA)

HSP 1 Score: 285 bits (730), Expect = 6.080e-91
Identity = 147/308 (47.73%), Postives = 203/308 (65.91%), Query Frame = 1
Query:   64 PATFVQCIQQAAKAANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSL--DQIFSGFFG-GKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLD---DGEGQVASFFRKGYKTCTWWEDEKAFPLELSDNWRT 969
            PA+F +    +A++A  AI +G++L+EVEFPPL    +E    SAYD+S+AN+ LA  F + F+   K+V+++LPDE E   AVE+ GTD   P V++++ R + +   +    DQ+F   FG G  G V  +  TDMY+ ++ S QELPD+ +L E DP K IVF+NLKLD  RGDLG PAFP K     FLS++KPVY LRTR YS+S +RPP++VNYQG  FR YPG +Q+LLD G+ +Y++V  +  RPALG FK+ LT  L+     D EG+  +F R GYKT TWWE+E+    + SD W+T
Sbjct:   89 PASFFELQINSARSAQLAIDEGHRLIEVEFPPLPAQVLEMDDVSAYDVSKANLELAIDFAKSFAANQKKVTIMLPDEAEARIAVENLGTDTPAPNVRVSSLRKSDENDDRVFKPDQLFLNLFGTGSGGAVKAVEGTDMYIILVASAQELPDVEELSELDPGKTIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSKVKPVYYLRTRQYSRSTSRPPFMVNYQGCLFRSYPGQFQTLLDTGNGKYRRVKGSTIRPALGEFKEELTEELKRQGVIDEEGKTLNFLRTGYKTTTWWEEERE---DASDVWKT 393          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163085 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH17_9STRA2.170e-232100.00DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
D8LBB0_ECTSI1.230e-12461.11DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2FWU4_9STRA4.790e-10155.20Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8YSK6_NANGC9.910e-9949.83DUF1995 domain-containing protein n=3 Tax=Monodops... [more]
A0A7S1ZIG6_TRICV4.230e-9750.49Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4QDH7_9STRA2.280e-9650.16Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4IJG4_9STRA2.750e-9650.49Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9UGE1_9STRA1.880e-9150.99Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0PW18_9STRA5.400e-9148.08Hypothetical protein n=2 Tax=Asterionellopsis glac... [more]
A0A6U0L276_9STRA6.080e-9147.73Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:703264..708306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163085|e_gw1.23.79.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896
DescriptionDomain of unknown function (DUF1995)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28PEZ@1|root,2QW2X@2759|Eukaryota
Evalue2.01e-125
Seed ortholog2880.D8LBB0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF1995
Ec32 orthologEc-27_004580.1
TranscriptId163407
TrackFilteredModels1
ProteinId163085
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163085gene_4944Tribonema minus UTEX_B_3156 geneContig_23 703264..708306 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163085Trimin1|163085|e_gw1.23.79.1Tribonema minus UTEX_B_3156 polypeptideContig_23 703264..708306 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4944_5exon_4944_5Tribonema minus UTEX_B_3156 exonContig_23 703264..703446 -
exon_4944_4exon_4944_4Tribonema minus UTEX_B_3156 exonContig_23 703796..704179 -
exon_4944_3exon_4944_3Tribonema minus UTEX_B_3156 exonContig_23 704691..704771 -
exon_4944_2exon_4944_2Tribonema minus UTEX_B_3156 exonContig_23 707017..707226 -
exon_4944_1exon_4944_1Tribonema minus UTEX_B_3156 exonContig_23 708193..708306 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4944CDS_4944Tribonema minus UTEX_B_3156 CDSContig_23 708193..708306 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4944 ID=mRNA_4944|Name=jgi.p|Trimin1|163085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=972bp|location=Sequence derived from alignment at Contig_23:703264..708306- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGCGGAGCAGACTGCGGTGACAGCGGAGGAGGAGCCTCTGGAGTC
AAATGAGCCTGCGCCAGCCACATTCGTGCAATGTATACAGCAGGCAGCCA
AGGCGGCAAATAAGGCCATTCAGGACGGCTACAAGCTGGTGGAGGTGGAG
TTCCCGCCCCTGTCGGTGGACTTTATGGAGGACACTAGCAGCAGCGCGTA
CGACATATCGCGCGCCAACGTGCGGCTGGCATCGCAGTTTGGGGAGTTTT
TCTCTATTGAGGGCAAGCGAGTGAGCGTGCTGCTGCCGGACGAGCCGGAG
CTGGAGCGCGCCGTGGAGGACGAGGGCACCGATGAACTATTCCCTCGCGT
GAAGCTGACCACCGCCCGGAGCAACATCAAGGGCACGGCTCAGTCGCTTG
ACCAGATTTTCTCGGGGTTCTTTGGGGGCAAGTCGGGGGAGGTCGTCCCC
ATCCCCAACACGGACATGTATGTGGCCATCATCTTCTCCTGCCAGGAGCT
GCCCGACCTGCGCAAGCTGCACGAGGCGGACCCCGAGAAGCCCATCGTCT
TCTTCAACTTGAAGTTAGACTCGCAGCGCGGCGACCTGGGCCTCCCCGCC
TTTCCCCCGAAGTCGCTGCACTACGAGTTTCTGAGCCAGATCAAGCCGGT
GTACTTGCTGCGCACGCGCGCTTACTCCAAGTCGCTCGCCAGGCCGCCCT
ACCTGGTCAACTACCAGGGGGCGCAGTTCCGCGTGTACCCGGGGGCGTAC
CAGAGCCTGCTCGACATTGGCTCGGCGCGCTACAAGCAGGTGGGCAAGAC
CAAGTTCCGGCCAGCGCTGGGCGCATTCAAAGACACGCTCACGAGCGCGC
TGCAGCTGGACGATGGCGAGGGCCAGGTGGCCTCCTTCTTCCGCAAGGGG
TACAAGACTTGCACGTGGTGGGAAGACGAGAAGGCGTTCCCCCTCGAGCT
CTCGGACAACTGGCGCACATAG
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protein sequence of jgi.p|Trimin1|163085

>Trimin1|163085|e_gw1.23.79.1 ID=Trimin1|163085|e_gw1.23.79.1|Name=jgi.p|Trimin1|163085|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=324bp
MSAEQTAVTAEEEPLESNEPAPATFVQCIQQAAKAANKAIQDGYKLVEVE
FPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPE
LERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVP
IPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPA
FPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAY
QSLLDIGSARYKQVGKTKFRPALGAFKDTLTSALQLDDGEGQVASFFRKG
YKTCTWWEDEKAFPLELSDNWRT*
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mRNA from alignment at Contig_23:703264..708306-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4944 ID=mRNA_4944|Name=jgi.p|Trimin1|163085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5043bp|location=Sequence derived from alignment at Contig_23:703264..708306- (Tribonema minus UTEX_B_3156 )
ATGTCAGCGGAGCAGACTGCGGTGACAGCGGAGGAGGAGCCTCTGGAGTC AAATGAGCCTGCGCCAGCCACATTCGTGCAATGTATACAGCAGGCAGCCA AGGCGGCAAATAAGGTGAGGCGCCGCAACCGGTAAGCTATGCAAGCCCCA AGCACCGGTGAGCATGGCTCTGGAGTGTGTGCGCACGTTGGTTCCATGTT CAAAGCAATGTATAACATCATGTTGCATGCTCGAGCATCAAGATCTCAGC AGGTCCAGATACATGTACATGATTATCCTGCCATTACAGCATCAATGCAT GTCACCACTGCAATTTGACACTTCATCGTTGTCATGTTGGTGCCATGTAT GCTGGCAGAGCCTGTTGGCCCTTCACACTGCTGCAGGTTTGTCGATGCTA GAACTTCAAGCTCGTGGCTATGCAGGTTGTAGCTTTGCCGCTGTATGCAA CTTCACCACTGTATGCACCCATAGCTTTTGGTGTTATAAAACCCACTGCA TTCTTGGTCAGGCATGTCATGAATTGGAAACATTGTACATGTGAATCGCT GAACACGTGAACAGCACAACCATGACGTAACATCACGGCTCCTACGTAGG AGTGCACTTTATCTGAAAGTTTCCTCGCATGCATACAGCAGTCTCTCAGC CAAGCTGTCAGTCCACACAACATGGCTGATGTTGGTGAAGTGGTGCTAAT TGCAGAAGGAATATGCATCTTTGGCACACGCTTCGGTTTGGTCCGCTATG TACTCATGTGGTGGTGATCTGAGCCTTACAGTATTGCAGGATTGCGACGC CGCCCAGGATGTGTGTACCATTCAAAGTTTGTCAATGTTTCAAGTAATGT GGACCTGCTAATGTAATAAGCAGTTTCTCATCGGTTGCAAACCTGACAAT TGACGAACCTCACAAGTGGTCAAACGCAGCCCTGCAGTAGGACCGTGATA TTGCTGCTGAGACCGCTGTGGTATGAAAACACATTGCTACATACACGTCT TTGTGACTCTTATGGTGCTTCCAAAGCATTTCAACACTCACGAGAGAACA ATGATTTTCGCCCTGTTGCTATGACGCCAGGCCATTCAGGACGGCTACAA GCTGGTGGAGGTGGAGTTCCCGCCCCTGTCGGTGGACTTTATGGAGGACA CTAGCAGCAGCGCGTACGACATATCGCGCGCCAACGTGCGGCTGGCATCG CAGTTTGGGGAGTTTTTCTCTATTGAGGGCAAGCGAGTGAGCGTGCTGCT GCCGGACGAGCCGGAGCTGGAGCGCGCCGTGGAGGACGAGGTGAGTGCGC ATGAATGATTGGATGAATCGTATGAATTTGTGAGCGTGCTGCTGCCGGAC GAGCTGGAGCTGGAGCGCGCAATGGAGGACGAGGTGAGTGCATATGAATA ACTGAATGAATCGTATGAATGAATGAATGAATCGAATGAATTTGTTAGCG TGCTGCTGCCGGACGAGCTGGAGCTGGAGCGCGCCGTGGAGGACGAGGTG CGGCGCGCGCATGAATGAATGAATGAAATGAATGAATTCATGAATTTGCC ACAAATCGGAGGACGAGGTGCGGCGCGCACATGAATTGATGAATGAAATG AATGAATTTCACACAAGTGCACTGGGCTGCAGCTGGAATTTTTTGAAGGA TGTCTCGTATTCTACACTTAGTTGCAATTCCCGTCATTGCAAAGAGTTCA CATATGAGTTGCAGGTTTGATGGATGTGTGTATACTTGTCCAATAGTACA AGAGGATGCATCTAGCAAGTAAAGTCAAAACAGCTCCTCTATGTTGTATA TCTTTAGCACATGCTGTGCCTGTGCAGCACACTTGCTATACGTGCACCTA TGCGCTTGTGTGTTGAAAAACAGCACTTTGATGGGGCAGGTGCACTGATG AGACGTTACGTGGCAACAATCGTGCCCAGAATGATCGTGACCTTCAAGTG CGTGCATACGGCACTGCGGCGTTGCAGTGCGCTGAAAAGCCTGTGCTTCG GAGCGCAAGCGCACAACAAGCACTATCTGATATCATTTCAATTGCCATGG GCATGATAATTTAATGATAAGACAATGTGTCTCGAAATTACCAACAATCA AAAAGACAATTTGTGAGTTTGATGACCTGATTAAAAAAGAACTCTGCTGA TCTCTGGTGAAAAGTTGAAACTGCTGCCTTTTGGCGGGGGGGGGCAAGAT GGTTTGTGATGCCACGGCCGGCGTTAGACGTCGATAACTGAAGCTGAGCG CCCTGTCCGCTGGCCACGGTTATCCTGAACATCGCCCTCGCGCAGCACCG TTGTCGCATTTTTTTGACACTAATCAAACACCCAGCACATCTCACACCGG CGTCAGCAACAGCGGCGATAGATGTAGCCGCAGCAGCAATCCTGATCGCA CCACGAGAAACGGCTGTGTCGTCAGCGCTGCGACCGCTGTGTACTTCACT GTGATGTACTGTGACGTTGTCCAGAATGTGTCTCAAGGCTGGGGGCGAGG AAAGACAGGCTGCGGGCGGCACTGCTGCGCAGGTGCAGAGCTGTCGGCCT ACATTGTCGCCCGCATATCCACGCAAATAGCACCTGCGCTCGCGTGTGTG TAGTAGCTGCTTGTGGGTGTGCTCGTGGGTTTGATGGCGACGGGCAAATC AGTGCACTGTGTCTGCTCACTTCCAAGAGGCGTGATAATGCAGTTACGTG TGTCGACTGTTACAAAAAAACTCGGTTAGATTGACAAAGTGACGGATTGA CAAATTTTAGTTTGAATTCCCTTCAATTTTGAAAAGGATGGGTAATGTGT CCCACACAAGTGCGGTCACTGAAAGTGTGACATGAAGTGATTCCGATTGT TGGCAATTAGATGGTTAACAATTGTCGAGTAGGCGCCTGAGGCAGGGAGT TGCTGGTGGTTGCTGCCAGCAGCGTTTTGGACAAGTCACCGGTCACAATG GGATAAATGGAGGATCATCATAGTTGTTACAAGGAAGCTAGTTGCGTTGA ACGCCTTGTGTGCCTCAGAGCCCAAGTGGCAGCGAGCGACGGGCAACATC TGAGTTCATCACCTTAAACTCCCTGGGCTTGATGCAGCCTACACAACTGC ACTCACTGAAAGTGTGACATCAAGTAATCTGATGATGAGTAACTGAATGG TCATCATTGTTCAGTAGGCGGCTGAGGCAGGGAGTTGGTGGTGGTAGCTG CCAGCGGCGTGTTGAACAAGTTATTCGTCAGAACGGGACAAATGGAGGTT TTTGTAGGTGTCACCAAGCCGCTGTGCAGCATGTTCAAGTAGCTGGTTTG CATCAGAGGTGGTTGTGATGCCTCCAGGTGTATTATACAGCCCTGTTATA CTTCAATGTGTCACTGGCCCAGAATGCTTGCACTGCAAATAATGTCAGTA CTGCCTGATCTGACATTAATGGCTTGCACACATAGCTGTGTAGCGGTCCA CAAACGAATGGTTCATGTTGTGCTGCTCGCCGTCAAACATGCTCACCACC TGTGCGCTGCTGCAACGGTGTTGTCTGTGCGACAGGGCACCGATGAACTA TTCCCTCGCGTGAAGCTGACCACCGCCCGGAGCAACATCAAGGGCACGGC TCAGTCGCTTGACCAGGTCAGCCACTTCAACTGCTACATGAAGTACTGTA CATATCACGTGGTCATTTGGTCATGGTCATGGTTTTTTATGGCGTAGCTT CCGCGCAAGTTTGTCCTGAGTGTAACGCACACAATGCCTGTAGGCGATGA CAGCGCATGCTGCGATGTGGTTCAGGTCACGATGCTCAAATGTCAACTGA GAGCCCACTGCCCAATGAAGGCACTTTGAGGTTTGTTGAAGTACAACTTG AAGTAAGAATCAGCGCAAGCATATGAAGTGGAGGTGAGTCGTTTATACCT CACACCCTCATGTCTGCCCCCACGATCTGCCTTTGCGGTGACCTTGCACA CATTCTCTCAGTGCTCATTTGCGGAACAAGATGCAGCAGGCGGCGCGCGC TCACGACACAGACAATGCACACCACCATTTTCTCATCGCAGTGTGAGCAC GATCACAATCACATGGCACCAACTGATCAGCGCGCGCCCCCCCCCCCCCC CCCACCCCCCGCTTTCACACTTGACAGATTTTCTCGGGGTTCTTTGGGGG CAAGTCGGGGGAGGTCGTCCCCATCCCCAACACGGACATGTATGTGGCCA TCATCTTCTCCTGCCAGGAGCTGCCCGACCTGCGCAAGCTGCACGAGGCG GACCCCGAGAAGCCCATCGTCTTCTTCAACTTGAAGTTAGACTCGCAGCG CGGCGACCTGGGCCTCCCCGCCTTTCCCCCGAAGTCGCTGCACTACGAGT TTCTGAGCCAGATCAAGCCGGTGTACTTGCTGCGCACGCGCGCTTACTCC AAGTCGCTCGCCAGGCCGCCCTACCTGGTCAACTACCAGGGGGCGCAGTT CCGCGTGTACCCGGGGGCGTACCAGAGCCTGCTCGACATTGGCTCGGCGC GCTACAAGCAGGTGAGGGGGGGGGGGGGGGCGCGCTCAAAAGTCACTTGT AGTGCGTGGTGGTGCTGAACGTGCTGGAGGACTGTTCGCAAGGAGTACCT GGGGCTCACAAGTTGCTGAGCATTGGCTGGGTGTACTACTTTATTGCCTG ACAGGTGGTCAAATCCGCTTTTGAGCTGGCGTGGCTCAGATGGTCGAATC CGCTTTGAGCTGGCGTGGCTCGCAATGAAGAACCTCAACTTGAGCGCTAC CGCTGTTTTACTCGCTGTATTATGGTGACACGTTAAGAATATGAAGTCAC CATCACACCCTAACTCTTGCCTTGTCGTTCTCCTCCTGGTGTGCGGCGCG TTCACGACAGGTGGGCAAGACCAAGTTCCGGCCAGCGCTGGGCGCATTCA AAGACACGCTCACGAGCGCGCTGCAGCTGGACGATGGCGAGGGCCAGGTG GCCTCCTTCTTCCGCAAGGGGTACAAGACTTGCACGTGGTGGGAAGACGA GAAGGCGTTCCCCCTCGAGCTCTCGGACAACTGGCGCACATAG
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Coding sequence (CDS) from alignment at Contig_23:703264..708306-

>mRNA_4944 ID=mRNA_4944|Name=jgi.p|Trimin1|163085|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=972bp|location=Sequence derived from alignment at Contig_23:703264..708306- (Tribonema minus UTEX_B_3156 )
ATGTCAGCGGAGCAGACTGCGGTGACAGCGGAGGAGGAGCCTCTGGAGTC
AAATGAGCCTGCGCCAGCCACATTCGTGCAATGTATACAGCAGGCAGCCA
AGGCGGCAAATAAGGCCATTCAGGACGGCTACAAGCTGGTGGAGGTGGAG
TTCCCGCCCCTGTCGGTGGACTTTATGGAGGACACTAGCAGCAGCGCGTA
CGACATATCGCGCGCCAACGTGCGGCTGGCATCGCAGTTTGGGGAGTTTT
TCTCTATTGAGGGCAAGCGAGTGAGCGTGCTGCTGCCGGACGAGCCGGAG
CTGGAGCGCGCCGTGGAGGACGAGGGCACCGATGAACTATTCCCTCGCGT
GAAGCTGACCACCGCCCGGAGCAACATCAAGGGCACGGCTCAGTCGCTTG
ACCAGATTTTCTCGGGGTTCTTTGGGGGCAAGTCGGGGGAGGTCGTCCCC
ATCCCCAACACGGACATGTATGTGGCCATCATCTTCTCCTGCCAGGAGCT
GCCCGACCTGCGCAAGCTGCACGAGGCGGACCCCGAGAAGCCCATCGTCT
TCTTCAACTTGAAGTTAGACTCGCAGCGCGGCGACCTGGGCCTCCCCGCC
TTTCCCCCGAAGTCGCTGCACTACGAGTTTCTGAGCCAGATCAAGCCGGT
GTACTTGCTGCGCACGCGCGCTTACTCCAAGTCGCTCGCCAGGCCGCCCT
ACCTGGTCAACTACCAGGGGGCGCAGTTCCGCGTGTACCCGGGGGCGTAC
CAGAGCCTGCTCGACATTGGCTCGGCGCGCTACAAGCAGGTGGGCAAGAC
CAAGTTCCGGCCAGCGCTGGGCGCATTCAAAGACACGCTCACGAGCGCGC
TGCAGCTGGACGATGGCGAGGGCCAGGTGGCCTCCTTCTTCCGCAAGGGG
TACAAGACTTGCACGTGGTGGGAAGACGAGAAGGCGTTCCCCCTCGAGCT
CTCGGACAACTGGCGCACATAG
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