mRNA_4936 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348379
Unique NamemRNA_4936
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A835Z0S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA)

HSP 1 Score: 671 bits (1731), Expect = 6.990e-242
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 1
Query:    1 MSIRRQSTVGSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPSEKGM 1044
            MSIRRQSTVGSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPSEKGM
Sbjct:    1 MSIRRQSTVGSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPSEKGM 348          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: D7FP22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 1.570e-108
Identity = 165/331 (49.85%), Postives = 233/331 (70.39%), Query Frame = 1
Query:   28 GSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMD 1020
            GS+Q   E  R+E ++ K   K+PP L N  +  APF+     + N+VGP +++ Y+ L+ +YK LP NV+ M+ GL   FFGG F VT AAIEAF   GG  V   + DLK D   +  A+K+DD+ DD+ +GI DVK+I   +L++RK  L LR ++PDR  +A+ G+++G+ GVLVVL+FRFA+V+ALAVSI +++RP+ ++I  P LAF+IP+EYH+WI+ MIN  C+ VA T+AW IQR++ST+QSAIKGGL+F+R+L+ F+ E   +  D + ++LDE+LGW LAA G Y Q  +NW+LP  VDLFLWP ++ E  L WSVTWMD
Sbjct:   55 GSIQAFNEDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVRFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVINPDRATNAITGIWQGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLFLWPAYLLETFLKWSVTWMD 385          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A7S1REG4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA)

HSP 1 Score: 249 bits (635), Expect = 4.890e-76
Identity = 129/317 (40.69%), Postives = 196/317 (61.83%), Query Frame = 1
Query:   91 KTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPSEKG 1041
            ++PP         AP I        ++GP +++L  A    Y+ LP  V   L GL  +FFGG + V+ AA EAFR +GGS VY  L+DL      V  A+  D+E D + +G+ DV+++   +LV+RK  LV++++DP+ V  A  GL+  + GVL VL+F+FAR IALA SIA ++RP  +++L P L  + P +Y KWIS  +++LC+ VA  +AWK++++ +T+QS   GGL+ +RAL+  + E R++S  D+ T LDE++GW + A GIYVQ+     +P ++    WPL V ERVL W+V W+DA+    G
Sbjct:    7 QSPPWAAQYLAKAAPAIGVLGAGCELLGPALVRLGGAACEAYRLLPGTVARGLGGLGMSFFGGRYTVSIAAWEAFRSMGGSQVYVCLQDLGEQGRAVWVAHVADEEEDADADGVADVRQLEGGRLVARKAALVMKTIDPETVARAAGGLWTAYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDYRKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQLFRGGPVPAILSPLFWPLDVLERVLQWNVAWVDAAQKPSG 323          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A7S2RLK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.700e-73
Identity = 123/323 (38.08%), Postives = 201/323 (62.23%), Query Frame = 1
Query:   43 EREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVT 1011
            E+E  R  KL+    +  PPA V   K++AP + A  V L++  P I+   +A+   ++ +P  ++  + G    FFGG++  T AA+EA+++ GG   Y    DL I+F  V   + +DD  D++ +GI DV +I   +L  RK  + L + DPD++N A+ G+Y G+ GV+ VL+ +FA+ IAL  +I D +   A R+  P L  LIP++YH+WI +++  +C+++A +IAW +QRV+S   SAI+GGL+ +R ++ F++   II F+D  +YLDEI+GW+LAA G Y Q  M +++P   +L LWP  V+E  ++W+V+
Sbjct:   62 EKEAERWTKLISSASESAPPAAVPYLKMMAPVLSAVLVGLHMALPLILSAAAAVDKFFQVVPAQLLVAVFGALICFFGGMYPATIAAMEAWQQAGGRRAYENARDLYIEFKRVMHKSAEDDLKDEDGDGIADVDQISGKELFMRKAHIALTTCDPDKLNGAIQGIYTGWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHRWIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQFMMGFSMPFPFNLLLWPFGVAEWYIVWTVS 384          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A813D688_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL)

HSP 1 Score: 231 bits (588), Expect = 1.610e-68
Identity = 127/333 (38.14%), Postives = 200/333 (60.06%), Query Frame = 1
Query:   31 SLQDEREVHRMEKLLGKFKD-KTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDD-ESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDA 1023
            S+ D +E  R+E  +      + PP L    + L P   A   V  V GP++ + Y+ L+ IYK LP+N    L GL   FFGG +A  FAA EAF+  GG  +   L+DL+ D   V  A + +DE             +   +  S+ L LV+R+VDP R++ A++G++ G+ GV++ L++ FAR +A A SI D++RP+A+++LAP    + P EY +W+   IN+ C+ VA  +AWK+Q+V+S++QS+I GGL+ +R  + +L  + +++  + E T +DEILGW LA+ G+Y QI    ++PLL+   LWP+ V+E  L WSVTW+ +
Sbjct:   44 SVLDRKEAARLEHFMVSLATGQEPPWLTPYLRKLGPAFAAANQVAAVAGPFLYQFYAGLYKIYKALPQNAACGLWGLGACFFGGRYAAFFAAAEAFKTAGGDQMLVCLQDLQADLVSVLQAQEDEDEAS-----------LSGEKKASKTLALVMRTVDPGRLSMALSGVWAGYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQIIKGGSVPLLLAPILWPMGVAESWLQWSVTWLGS 365          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A7S2VT12_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VT12_9DINO)

HSP 1 Score: 224 bits (572), Expect = 2.670e-66
Identity = 127/321 (39.56%), Postives = 189/321 (58.88%), Query Frame = 1
Query:   28 GSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSER 990
            GSL D RE  R+EKL     D  PP      K  AP +     ++ V+GP +   Y++L+ +Y+ LP N  + L GLA  FFGG + ++ AA+EAF+  GG  +   L  L+     VQ A+++DD+ D + +G+ DV+++ + QL SRK+ LVLRS+DP  V+ A+ GL+ G+ GVL  L+ R+AR  ALA SI D +RP AS++  P +  + P +Y  W+    N+ C+ +  TIAW++Q  +ST+QS + GGL  +RA +  +      + DD  T  DE+ GWALAA GIY Q  +   LP ++   LWP  + ER
Sbjct:   39 GSLVDRREAERLEKLTVGLSDAAPPWAAPYIKQAAPAVGLAGAIVEVMGPIVYNFYASLYRVYQTLPTNAASCLWGLALCFFGGRYPLSLAAVEAFKLAGGDSMMMHLVTLRDSAVKVQQASQEDDKHDADGDGVADVRQMGARQLFSRKMALVLRSIDPGVVSEAVGGLWSGYLGVLAALKLRYARTAALAHSIGDAVRPAASKLFGPSVLAVTPPDYRNWVGPAFNLACKVLGLTIAWRLQHAISTVQSGLTGGLQASRAALALMGR----ASDD--TMADEVAGWALAATGIYYQF-LGGGLPAVLVPVLWPAGLLER 352          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A6T8HJ76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HJ76_HEMAN)

HSP 1 Score: 224 bits (570), Expect = 3.640e-66
Identity = 127/328 (38.72%), Postives = 192/328 (58.54%), Query Frame = 1
Query:   46 REVHRMEKLLGKFKDK--TPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQ-LVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMD 1020
            RE  R+E++     ++   PP   +L   L P +      ++   P ++   +A  AI+  LPK  +  L GL   FFGG + VT AA+EAFR  GG  V   + D+  D   V+ AN  D++ DD+ +G  DV ++ S + L+SRK+ LVLR+VDPDRV  A+ GL + F GVL  L+ +FAR +ALAVSI+D++R  A  +L P LA LIP EYH W+S +I++ C+ V   +AW + R+++T  +++ GGLM ARA +   ++   +    E + LDE  GW L   G Y Q+   ++LP  +++ L P+ + E  L W+VTW D
Sbjct:   13 REAARVERICNALAEREGVPPWTKSLLVQLGPLLTTLLAFIDASTPVVMSAIAAAVAIWNTLPKQAITALYGLVLCFFGGHYTVTLAAVEAFRVSGGERVTQCIRDIWTDITNVRIANAADNKKDDDHDGKLDVDQLSSDKALLSRKIGLVLRTVDPDRVIQALGGLAQAFAGVLATLKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYHHWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQLSSGFSLPFPLNVVLLPVSMVEWFLTWAVTWFD 340          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A7S1AZY3_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZY3_NOCSC)

HSP 1 Score: 218 bits (554), Expect = 1.720e-63
Identity = 120/303 (39.60%), Postives = 176/303 (58.09%), Query Frame = 1
Query:   49 EVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVD 957
            E  R+ K++    +K PP+L    +  A  +    VVL  + P ++        IY++LP+++V+ + G    F GG F    AA EAF + G  +   A+  L  +  I+   +KKDD+VD + +GIKDV +I   +L++RK LLV+R    D++N A+  LY GF  V   L+ +FAR I+L VSI +  RP+A  +L PPL  L+PKEYH WI  +I+ +C+ VA ++AW IQR+LS   SAI+G LM  RAL+R  +E    S  ++ T LDE  GW LAA G   Q++  + LP  VD
Sbjct:   62 EEKRISKMITAASEKAPPSLTKYIQAAAHVLAWAWVVLAALLPIMVLAIEKAVEIYRKLPQDIVSAIAGFLMCFTGGTFPTVIAAAEAFTQTGWKESQEAIGFLWDELHIIAEESKKDDDVDADGDGIKDVNQITGSELITRKTLLVMRKTHADKINRALGSLYVGFLSVAATLKVQFARTISLGVSIGNVARPVAETVLVPPLTHLVPKEYHHWIRPVIDYICKAVAVSVAWWIQRILSAYHSAIRGALMCTRALLRIANEKNWYSTTEDKTMLDEYAGWVLAAFGFMCQMYFGFALPFPVD 364          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A813FNH9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FNH9_POLGL)

HSP 1 Score: 210 bits (535), Expect = 6.630e-61
Identity = 112/319 (35.11%), Postives = 188/319 (58.93%), Query Frame = 1
Query:   58 RMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTW 1014
            R+ KL+ +  +K P  L    +  AP++    V   +  PY+I+       +  +LP+ ++   +G    FFGG+F  T AA+EA++  GG +    + +L  +F  VQ A+KKDD+ D +K+G  DV E+   QLV RK+ + + +V+P+R++ A+ GLY G+ GVL +L+ +FA+ + L   I   +   AS+   P +  ++P+EY KW+   +    + +A + AW IQRV+S I S+I+GGLMF + LV +LHE   +  + + TY+DE +GW +A  G   Q    ++LP L ++FLWPL + E ++++SV +
Sbjct:   28 RLVKLIEEVGEKAPANLRPHIRTAAPYLATVWVYFTMALPYVIQGIQITQELLAKLPEKILWAFVGFLVCFFGGVFPATIAAVEAWQLCGGKEALVHVAELWNEFQKVQDASKKDDDADADKDGKADVSEMTPQQLVQRKIAVAMMTVEPERISTAVGGLYIGWVGVLAILKIQFAKTVTLGEIIGGAIYKPASKF-EPMIETMVPQEYSKWVPVGLRWTIKLMAISTAWMIQRVISAIHSSIRGGLMFGKYLVDYLHETGYLKAETKDTYIDEAIGWGVAFLGFLTQCAFGFHLPFLFNIFLWPLQLVEAIVVYSVAY 345          
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Match: A0A1Q9EFK4_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EFK4_SYMMI)

HSP 1 Score: 211 bits (537), Expect = 5.630e-60
Identity = 129/342 (37.72%), Postives = 193/342 (56.43%), Query Frame = 1
Query:   16 QSTVGSLQDEREVHRMEKL-LGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARA----LVRFLHENRIISFDD-ESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDA 1023
            +S  GS    +E  R+E+L L  +   TP     L  +  P ++    V++V GP +   YS LF IYK LP++    L GL   FFGG +   FAA E+F+  GG  +  +L+DL++D   V  AN   +            K++        K+ LVL +VDP R++ A+  L+ G+ G+++ L+++FAR +A A SI DH+RPLA+++LAP    + P EY +WI   IN+ C+ +AT  AWK+QR+LS++Q+ I GGL+  R+    L+  LH   ++S    E + +DE++GW+LAA GIY QI      PL    FL PL + E  L WSV W+ A
Sbjct:  127 ESGPGSYTGRKEKMRVERLALSTYAKGTPWLSHCLDGIGRPALEMAGDVISVAGPPVYSFYSGLFTIYKALPRDAATCLWGLGQCFFGGHYTAFFAAAESFKSAGGDQMLASLQDLQVDAVAVLQANANME------------KDLGKPTSAWEKVQLVLCTVDPQRISDALGSLWTGYMGLVLALKYKFARTVAFAHSIGDHLRPLAAKVLAPAALAVTPPEYRQWIEPSINLGCKAIATAAAWKLQRILSSVQTGIAGGLLVGRSAWSLLLPALHRRGVVSKQSVEDSMVDELIGWSLAASGIYYQIVQGGGAPL----FLLPLTIVETWLQWSVAWLAA 452          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348379 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0S9_9STRA6.990e-242100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP22_ECTSI1.570e-10849.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1REG4_ALECA4.890e-7640.69Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S2RLK5_9STRA1.700e-7338.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A813D688_POLGL1.610e-6838.14Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A7S2VT12_9DINO2.670e-6639.56Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A6T8HJ76_HEMAN3.640e-6638.72Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1AZY3_NOCSC1.720e-6339.60Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A813FNH9_POLGL6.630e-6135.11Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A1Q9EFK4_SYMMI5.630e-6037.72Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:649352..653926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348379|estExt_Genemark1.C_Ctg_230074
Max annot lvl2759|Eukaryota
EggNOG OGs2C1MM@1|root,2S2PZ@2759|Eukaryota
Evalue1.53e-110
Seed ortholog2880.D7FP22
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_001710.1
TranscriptId348701
TrackFilteredModels1
ProteinId348379
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348379gene_4936Tribonema minus UTEX_B_3156 geneContig_23 649352..653926 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348379Trimin1|348379|estExt_Genemark1.C_Ctg_230074Tribonema minus UTEX_B_3156 polypeptideContig_23 649595..653926 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4936_5exon_4936_5Tribonema minus UTEX_B_3156 exonContig_23 649352..650063 -
exon_4936_4exon_4936_4Tribonema minus UTEX_B_3156 exonContig_23 651261..651283 -
exon_4936_3exon_4936_3Tribonema minus UTEX_B_3156 exonContig_23 652045..652164 -
exon_4936_2exon_4936_2Tribonema minus UTEX_B_3156 exonContig_23 653106..653292 -
exon_4936_1exon_4936_1Tribonema minus UTEX_B_3156 exonContig_23 653679..653926 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4936UTR3_4936Tribonema minus UTEX_B_3156 three_prime_UTRContig_23 649352..649594 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4936CDS_4936Tribonema minus UTEX_B_3156 CDSContig_23 653679..653926 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4936 ID=mRNA_4936|Name=jgi.p|Trimin1|348379|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1290bp|location=Sequence derived from alignment at Contig_23:649352..653926- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCATAAGGAGGCAGTCCACCGTAGGCAGCCTGCAGGATGAGCGAGA
GGTGCACCGCATGGAGAAGCTTCTGGGCAAGTTTAAGGACAAGACACCAC
CGGCATTGGTGAACCTCTTCAAGCTCTTGGCGCCGTTTATCAAAGCTTTC
TGCGTGGTTCTCAATGTAGTGGGGCCATACATCATCAAGCTCTATTCGGC
GTTGTTCGCCATCTACAAGAGGCTACCAAAGAACGTGGTCGCCATGCTGT
TGGGCCTGGCCTTCACATTCTTTGGAGGATTGTTTGCGGTCACTTTTGCA
GCCATCGAGGCTTTCAGAGAGCTGGGAGGGAGCGATGTGTATACTGCACT
GGAGGATCTGAAAATTGATTTCGACATAGTTCAGACAGCCAACAAGAAGG
ACGATGAAGTGGACGACAACAAGAATGGCATCAAGGATGTCAAGGAGATA
CCTTCGCACCAGCTGGTGTCTCGAAAGCTCTTGCTGGTTCTGCGATCTGT
CGACCCAGACCGTGTCAACCATGCAATGGCAGGCCTTTACAAGGGCTTCA
CTGGGGTGTTGGTGGTGCTGAGGTTCAGGTTTGCGAGGGTCATCGCTCTC
GCTGTCAGCATTGCGGACCACATGCGGCCCCTGGCATCTCGCATCCTCGC
CCCCCCGCTGGCCTTCCTCATTCCCAAGGAGTACCACAAGTGGATCTCCA
CCATGATCAACGTCTTGTGCCGCACCGTCGCCACCACCATCGCGTGGAAG
ATCCAGCGCGTGCTGTCTACCATTCAGTCGGCCATCAAGGGCGGTCTCAT
GTTTGCGCGCGCGCTCGTCCGATTCCTACATGAAAACCGCATCATCAGCT
TCGACGATGAGAGCACGTATCTGGATGAGATACTGGGGTGGGCACTCGCA
GCGGGGGGTATTTACGTGCAGATTCACATGAATTGGAACCTGCCGTTGCT
GGTGGACCTGTTCCTGTGGCCACTCCACGTCAGTGAGAGGGTGCTTATCT
GGAGTGTAACATGGATGGATGCGTCACCTAGCGAGAAGGGTATGTAGGAG
GCCGTCACTCTCATTTCAGAAAGGCTTGTATGTACAGACATGTAGGCTTG
TAGGTAAAGTGGACCATTCCCACTGCTTCAGTGCGTGATGCGGATCGTGA
TGTCAATGCAACAGCAGGGATTTGACGCTTCAACAAGGGCCCTCAGTTGA
AGCTTGCTGTAGGACACTGACAGCTGACACGCCGCACCTTTGCCATTCAA
TTCAGCACACGTGAGGAAATGCACAGTCCATTGGAAGAGG
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protein sequence of jgi.p|Trimin1|348379

>Trimin1|348379|estExt_Genemark1.C_Ctg_230074 ID=Trimin1|348379|estExt_Genemark1.C_Ctg_230074|Name=jgi.p|Trimin1|348379|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=349bp
MSIRRQSTVGSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAF
CVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFA
AIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEI
PSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIAL
AVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWK
IQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALA
AGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPSEKGM*
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mRNA from alignment at Contig_23:649352..653926-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4936 ID=mRNA_4936|Name=jgi.p|Trimin1|348379|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4575bp|location=Sequence derived from alignment at Contig_23:649352..653926- (Tribonema minus UTEX_B_3156 )
ATGAGCATAAGGAGGCAGTCCACCGTAGGCAGCCTGCAGGATGAGCGAGA GGTGCACCGCATGGAGAAGCTTCTGGGCAAGTTTAAGGACAAGACACCAC CGGCATTGGTGAACCTCTTCAAGCTCTTGGCGCCGTTTATCAAAGCTTTC TGCGTGGTTCTCAATGTAGTGGGGCCATACATCATCAAGCTCTATTCGGC GTTGTTCGCCATCTACAAGAGGCTACCAAAGAACGTGGTCGCCATGCTGT AAGTTCCTTCAGATCCAAGCACATTGCTGTGCTGTGCCACATGATCCACA TGGAACCTCGCAGATATCTGACTTAGCGCTTGCTTTGACCTGTGCTAGGT TCGTGATTAATGCGTCGTTGTGTAATATTGTAATGCTCCATGTTGTAATC ATCCAGTCAATCGCACAACCTGACTGACCATCACGAATGCGGATTGGAAG ATGGTGTGCTCAACTTACACGACAAATCATAGGCATGTCAGGTTTATTGT TTGCGTGCATCGTTGTACCTGCTTTAGACTAGTCAGATGAGGCAATGGCT CGGATGTTCTGCTGGTAGAAAGCGCATGGGTGGTGACAGGTTAGTTTCAT GTACCCTGTTGGCTTTGATGTCGTTTGATTACAGGTTGGGCCTGGCCTTC ACATTCTTTGGAGGATTGTTTGCGGTCACTTTTGCAGCCATCGAGGCTTT CAGAGAGCTGGGAGGGAGCGATGTGTATACTGCACTGGAGGATCTGAAAA TTGATTTCGACATAGTTCAGACAGCCAACAAGAAGGACGATGAAGTGGAC GACAACAAGAATGGCATCAAGGTGTGTTGGTCTTTCTTGAGTATGCACAG CTTTATGGGTATGATGTTCGCACTCTGAAGTCTCTGTGTTTGACATCATA TACGGTGCGCGTTACTATGCAGTGGTTCATGGAATGCAACAGCGCATGTC CCAGACGCCGTACCAATTTTGCCACAATGTAAAGGTCATGTCAGTGTCAT TGATCATTGACAGCAGCAAGCCTGTTCTGCACATTCCATCAAATATCTGC ATGCAGTTCGCATGTTGCACTGTGGAAGAACTTTCGACTGTATGGCCTGC TGTGCAGCAATTTTGCTTGGCACTTGAGCCTTGGAGACACGCGGTCCCCC AGTTTTGACATGGTGAGAGGCACGCGGCAGTGAATGGGTAGCAGGTGATC TGACTTCAACTTGTCAGGCTTGGACAGGATGATTTGCAAAGTTGGACCTT TGCAAGCCAGCAGCTCGGCGATGACTACACACAACCTATGCTCAGGGCAT GAATTTTACAAGCACCGACGCTAACGCTGTTGGTGGTGGCAATGTGGCCT CATTTGCCTTCAGTGCGCATGCAAATTTTGTCATGGCAGTTGAAAGCTCT GGTGCACAGGACTGATGCAGGGATCTGAGCCAGTATAGTGCTGTTTGCGT GGCAAGCAACATGTACCGGCCAACATGCATGCTCGCCGATCACAGCAACA TGCTCAAACTTTTTTTCACCTGCCACTTTGCCAGATACGCCATCACTCGC TGATACAACCCAATTTGCAGCGCAGTGGAAAGCGCAGCCCTAATCCCAGC AACTGCAATCCCCTTAAGCGCCGCCTCTGCCGGGCCAAAGTCGCTCCGCC ATACTCCTCAGCCACGGCGGTAACGAGGGCGCTGGCAACTTGTACCAGCC AAAATGCATGCTTGCCGATTACAGCAACATGATCAAACTTCAACCAACCT GCGGTTTTGCAGGATGTCAAGGAGATACCTTCGCACCAGCTGGTGTCTCG AAAGCTCTTGCTGGTTCTGCGATCTGTCGACCCAGACCGTGTCAACCATG CAATGGCAGGCCTTTACAAGGGCTTCACTGGGGTGAGTTTAATGTCAATT ATGCACACGCTCTCATTGAACATGTGCCATGCATGCATCTCACAAGCCAA TGAAGCTCTTGTGAAGCTCTTGTGTTCACAACATCTGCGGTTTGGGCATT CCATTATATCCTCTTGGAATAGTTCAGTAATGACAGAAACTGAATATGCG CTTTGATCTTGGTGTGAGCACTCGGAATCAATTCAACAATGGCAGAGCAA GGGCTTCCATCAACAGTTGTTGCCAAAGGGGCGAACTTCTTCTGTTGGCA TCGGCGCAAATGTCAGTTATGTGGTGTCACCAGTCCTGAGTTGTATCGCA AGTGTCAGTCGATGGCCTGCACCTGTTGGTGCTCGTACTGGGAACAAGAC ACCATAGCAGCTGGTATGATTTCCACGGAATGATTGAGTATTTAGGACAA CTGAGCCAAGGCGCAACAAGCTGCAGATCTTGCGCGTTCTTGCTCTAAAT AAGCTCTTGCATGCTTTTTTTTGGAGAGGACACACTCTGCATCATGTGGA AGACTTCAAGACGCGTAGCCATGTGTGCTTGGCCACTTGATGAAACTCAT GGGTTTTGCTGCACCATTTCACAAACCTCACTCTGAGCATCTTACTTGCT TGACGTTGATTCGCGTCACCTGTCTTAATGAACATTAGCCTCGTAGAATG ATGTTTCGTGGTGAGTGCGTCTAACCGCAAGGTGGTGCCATGTGCTGATA GGGCCACATGCTCCTTGTTGCCTGTTACCGCGTGCACAACCAGGTGTTGG TGGTGCTGAGGTTCAGGTGAGCCATGTGCCATTTCCCACCTTGAAAACTT CATTTCGATTTGAGAAGAAATAAGTTACACTGTGAGCTTGCACTTGCACT TGCGCTGCTGTGTGCGGTCAAACGTTGTGCCCTTGGCAGCTTTTACCACC GCCGCATCATGGGTGCTAATTAAACTTTCAGTCTACAGCACGAATCTTGT AGTTGCCGCAAGCAAGCTTACTTGTGGATGATTCAGGGTGAACTGGAACG GTGTTACTGTACCTGTCAACTAGGGAGCACAGCAGCCCACGTCCCTACTG CAAGCACGCTGTAAAGCACAGCAACATGATGGCTTCACTTCGGTAATGTG GTATTCAGCAATTTCAGCGTTCGTTAACACTTAAATCAACTTTGACACTG GACCACACGGCATACTTTCAAAAGGTCACAAGCAAGCAGCCTGCCTGCAC ACAAAAGTGTCACCTGATGGCGTCAACAGCATTGCCGCAGTGAAACCAAC AGCACTGCGAAGACCTGATGAGTTCTGAAAGTGTTATTAGACTCGTTTTA CAGCAGCATCGCGGGTGTGTAGGGCTGTCAACGCAAAGGGAAGCAAGTAC GCAAGCAGCTCTGTCGCTTTTTGCTAATGCTTGTCGATATGTACACAATT CGTTCCGTCGCTTTTTGCTGATGCTTATAAATAAATCGATACTCCTGGCT CGAACTGTTCGTAGTAGTCATTGGCTCCAGTGCACGAGGTGCGATTGTGA TGAGGCTGAATACGTAAATCAATTCATCACAATTTGCCATTACTCAGGAC TGAGAGTACTGAGAGCATGTTGTGATAGCCTCATGTGTCATGTTGCGCAC GCACAGAAGATGTGTTTATGATACACAGCTGACACTACTTGAAGTGCTAT GTAGATCATGTTGCCTCTAAGCAAATGATAAAATGTCTGCTTGCACTGTA AACCAAACAGTGCCTGCTGGAGTGCAGAGGGGTGATAAACGAACAGCCCA ATCAACACTCAACATGACCTAGTGCAGGATTCCAACATTGCTGCAGGTGG TTAGCTTGAACTGCCAGCTGCTCAACAACAGCTGTCTGCAAGCAATCTGA GGCTTGAGCAGTCTCAATGCAATCACATCCAAATGACCATGACTCAAGTT GTAGTATGCCGACCCGCACTCTCACTAAACACCGTCCGCTGCTGCGCACC CCACTGCTTACAGGTTTGCGAGGGTCATCGCTCTCGCTGTCAGCATTGCG GACCACATGCGGCCCCTGGCATCTCGCATCCTCGCCCCCCCGCTGGCCTT CCTCATTCCCAAGGAGTACCACAAGTGGATCTCCACCATGATCAACGTCT TGTGCCGCACCGTCGCCACCACCATCGCGTGGAAGATCCAGCGCGTGCTG TCTACCATTCAGTCGGCCATCAAGGGCGGTCTCATGTTTGCGCGCGCGCT CGTCCGATTCCTACATGAAAACCGCATCATCAGCTTCGACGATGAGAGCA CGTATCTGGATGAGATACTGGGGTGGGCACTCGCAGCGGGGGGTATTTAC GTGCAGATTCACATGAATTGGAACCTGCCGTTGCTGGTGGACCTGTTCCT GTGGCCACTCCACGTCAGTGAGAGGGTGCTTATCTGGAGTGTAACATGGA TGGATGCGTCACCTAGCGAGAAGGGTATGTAGGAGGCCGTCACTCTCATT TCAGAAAGGCTTGTATGTACAGACATGTAGGCTTGTAGGTAAAGTGGACC ATTCCCACTGCTTCAGTGCGTGATGCGGATCGTGATGTCAATGCAACAGC AGGGATTTGACGCTTCAACAAGGGCCCTCAGTTGAAGCTTGCTGTAGGAC ACTGACAGCTGACACGCCGCACCTTTGCCATTCAATTCAGCACACGTGAG GAAATGCACAGTCCATTGGAAGAGG
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Coding sequence (CDS) from alignment at Contig_23:649352..653926-

>mRNA_4936 ID=mRNA_4936|Name=jgi.p|Trimin1|348379|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1047bp|location=Sequence derived from alignment at Contig_23:649352..653926- (Tribonema minus UTEX_B_3156 )
ATGAGCATAAGGAGGCAGTCCACCGTAGGCAGCCTGCAGGATGAGCGAGA
GGTGCACCGCATGGAGAAGCTTCTGGGCAAGTTTAAGGACAAGACACCAC
CGGCATTGGTGAACCTCTTCAAGCTCTTGGCGCCGTTTATCAAAGCTTTC
TGCGTGGTTCTCAATGTAGTGGGGCCATACATCATCAAGCTCTATTCGGC
GTTGTTCGCCATCTACAAGAGGCTACCAAAGAACGTGGTCGCCATGCTGT
TGGGCCTGGCCTTCACATTCTTTGGAGGATTGTTTGCGGTCACTTTTGCA
GCCATCGAGGCTTTCAGAGAGCTGGGAGGGAGCGATGTGTATACTGCACT
GGAGGATCTGAAAATTGATTTCGACATAGTTCAGACAGCCAACAAGAAGG
ACGATGAAGTGGACGACAACAAGAATGGCATCAAGGATGTCAAGGAGATA
CCTTCGCACCAGCTGGTGTCTCGAAAGCTCTTGCTGGTTCTGCGATCTGT
CGACCCAGACCGTGTCAACCATGCAATGGCAGGCCTTTACAAGGGCTTCA
CTGGGGTGTTGGTGGTGCTGAGGTTCAGGTTTGCGAGGGTCATCGCTCTC
GCTGTCAGCATTGCGGACCACATGCGGCCCCTGGCATCTCGCATCCTCGC
CCCCCCGCTGGCCTTCCTCATTCCCAAGGAGTACCACAAGTGGATCTCCA
CCATGATCAACGTCTTGTGCCGCACCGTCGCCACCACCATCGCGTGGAAG
ATCCAGCGCGTGCTGTCTACCATTCAGTCGGCCATCAAGGGCGGTCTCAT
GTTTGCGCGCGCGCTCGTCCGATTCCTACATGAAAACCGCATCATCAGCT
TCGACGATGAGAGCACGTATCTGGATGAGATACTGGGGTGGGCACTCGCA
GCGGGGGGTATTTACGTGCAGATTCACATGAATTGGAACCTGCCGTTGCT
GGTGGACCTGTTCCTGTGGCCACTCCACGTCAGTGAGAGGGTGCTTATCT
GGAGTGTAACATGGATGGATGCGTCACCTAGCGAGAAGGGTATGTAG
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