mRNA_4933 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A836CGF1_9STRA (DnaJ-like protein, subfamily B, member 3 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF1_9STRA) HSP 1 Score: 287 bits (734), Expect = 2.760e-98 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPFFGGFDHFEMFNELFAGGPFHGQSPFDYAFASDPRTTHPGNFHQHNG 414 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPFFGGFDHFEMFNELFAGGPFHGQSPFDYAFASDPRTTHPGNFHQHNG Sbjct: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPFFGGFDHFEMFNELFAGGPFHGQSPFDYAFASDPRTTHPGNFHQHNG 138
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: Q17AG1_AEDAE (AAEL005305-PA n=10 Tax=Culicinae TaxID=43817 RepID=Q17AG1_AEDAE) HSP 1 Score: 96.3 bits (238), Expect = 1.170e-21 Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYD-----GI--RAAYKQFKGSPHAHHGGTYGHDEQPFFGGF-----DHFEMFNELFAGGPF 333 D+YKVL V ++ATE +IK AY++LA +WHPDKNP + + +N+RF EISEAYEVL + RR YD G+ A + + S H H G HDE FGGF D E+F E F G PF Sbjct: 3 DYYKVLEVTRTATEGEIKKAYKKLALRWHPDKNPDNADESNRRFREISEAYEVLSDEKKRRIYDQYGKEGLINNGADRYHQSSRHRRHNGGGIHDEFDIFGGFPFTFRDPEEVFREFFGGSPF 125
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: Q7ZW83_DANRE (DnaJ (Hsp40) homolog, subfamily B, member 6 n=3 Tax=Danio rerio TaxID=7955 RepID=Q7ZW83_DANRE) HSP 1 Score: 93.2 bits (230), Expect = 1.270e-20 Identity = 61/141 (43.26%), Postives = 75/141 (53.19%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPFFGGF---DHFEMFNELFAGGPFHGQSPFDYAFASDPRTTHPGNFHQHNG 414 D+Y +LGV +SA+ IK AYR+LA +WHPDKNP DKE A KRF EISEAYEVL RR+YD +G GH + + GGF + ++F E F G PF FA DP G H+H G Sbjct: 4 DYYHILGVTKSASPDDIKKAYRKLALKWHPDKNPNDKEEAEKRFKEISEAYEVLSDENKRRDYDRYGKQGLSNRG----------GHYDDEYMGGFTFRNPEDVFREFFGG-----HDPFADFFADDPXXXXXGG-HRHRG 128
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: UPI0009444086 (LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 3 n=1 Tax=Rhinolophus sinicus TaxID=89399 RepID=UPI0009444086) HSP 1 Score: 90.1 bits (222), Expect = 2.460e-20 Identity = 58/128 (45.31%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPF---FGGFDHFEMFNELFAGGPFHGQSPFDYAFASDP 375 D+Y+VLGVP+ A+ IK AYR+LA +WHPDKNP++KEAA +RF ++++AYEVL A+ R YD R KGS GG G E PF F D ++F E F G + PF F DP Sbjct: 3 DYYEVLGVPRQASSEAIKKAYRQLALRWHPDKNPENKEAAERRFKQVAQAYEVLSDAKKRDVYD--RYGEAGVKGSG----GGGAGPFEDPFEYVFNFRDPADVFREFFGG-----RDPFSLDFFGDP 119
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A1I8PZP3_STOCA (J domain-containing protein n=1 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8PZP3_STOCA) HSP 1 Score: 92.0 bits (227), Expect = 5.120e-20 Identity = 64/139 (46.04%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTY-GH--DEQPFFGGFDHF-----EMFNELFAGGPFHGQSPFDYAFASDPRTTHPG 393 D+YKVL VP+SATE +IK AYR+LA +WHPDKNP + + ANKRF E+SEAYEVL + RR YD + + G H Y GH DE GGF E+F E F G SPF F HPG Sbjct: 3 DYYKVLDVPRSATEAEIKKAYRKLALKWHPDKNPDNLDEANKRFRELSEAYEVLSDEKKRRVYD--QYGKEGLLGERGHHRSSRYHGHEFDEFDIMGGFPFVFRPPEEVFREFFGGN-----SPFADLFRDVHSYQHPG 134
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A6G1BGP7_CROCR (DNJB3 protein (Fragment) n=2 Tax=Hyaenidae TaxID=9676 RepID=A0A6G1BGP7_CROCR) HSP 1 Score: 91.7 bits (226), Expect = 5.880e-20 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPF---FGGFDHFEMFNELFAGGPFHGQSPFDYAFASDP 375 D+Y+VLGVP+ A+ IK AYR LA +WHPDKNP++KE A +RF E+++AYEVL A+ R YD A + G H GG G PF F D E+F E F G + PF + F DP Sbjct: 3 DYYEVLGVPREASSEAIKKAYRRLALKWHPDKNPENKEEAERRFKEVAQAYEVLSDAKKRDVYDRYGEAGVEDCGGGHGR-GGASGPFHDPFEYVFTFRDPAEVFREFFGG-----RDPFSFDFFGDP 124
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: UPI0004D074C9 (dnaJ homolog subfamily B member 3 n=1 Tax=Galeopterus variegatus TaxID=482537 RepID=UPI0004D074C9) HSP 1 Score: 91.3 bits (225), Expect = 7.370e-20 Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPFFGGFDHFEMFNELFAGGPFHGQSPFDYAFASDP 375 D+Y+VLGVP+ A+ IK AYR+LA +WHPDKNP++KEAA +RF +++EAYEVL A+ R+ YD A G+ GG + F D E+F E F G Q PF + F DP Sbjct: 3 DYYEVLGVPRQASSEAIKKAYRKLALKWHPDKNPENKEAAERRFKQVAEAYEVLSDAKKRQVYDRCGEAGVNGGGAG----GGPFQDPFDYIFTFRDPVEVFREFFGG-----QDPFSFDFFGDP 118
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A7J7EU57_DICBM (J domain-containing protein n=2 Tax=Rhinocerotidae TaxID=9803 RepID=A0A7J7EU57_DICBM) HSP 1 Score: 91.7 bits (226), Expect = 1.080e-19 Identity = 57/128 (44.53%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPF---FGGFDHFEMFNELFAGGPFHGQSPFDYAFASDP 375 D+Y+VLGVP+ A+ IK AYR+LA +WHPDKNP++KE A +RF ++++AYEVL A+ R YD A + G GG G E PF F D E+F E F G Q PF + F DP Sbjct: 42 DYYEVLGVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAQAYEVLSDAKKREVYDRYGEAGVEEGGG-----GGAGGLFEDPFEYVFTFRDPAEVFREFFGG-----QDPFSFDFFGDP 159
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A2Y9EAH2_TRIMA (LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 3 n=2 Tax=Afrotheria TaxID=311790 RepID=A0A2Y9EAH2_TRIMA) HSP 1 Score: 88.2 bits (217), Expect = 1.220e-19 Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHGGTYGHDEQPF---FGGFDHFEMFNELFAGGPFHGQSPFDYAFASDP 375 D+Y+VLGVP+ A+ IK AYR+LA +WHPDKNP++KE A +RF +++EAYEVL A+ R YD A A GG G + PF F D E+F E F G + PF + F DP Sbjct: 3 DYYEVLGVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLADAQKRDVYDRYGKA---------AVDGGGGGPFDDPFDFVFTFRDPAEVFREFFGG-----RDPFSFDFFGDP 116
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Match: A0A7C0ZLW6_9PROT (J domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C0ZLW6_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 2.970e-19 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAYEVLRSAETRREYDGIRAAYKQFKGSPHAHHG-GTYGHDEQPFFGGF-------------DHFEMFNELFAG 324 D+Y VLGV + A+E +IK A+R+LA+++HPD NP D AA K+F E+SEAYEVL A+ R+EYD ++Q G H+H G G YG D FGG + ++F++LFAG Sbjct: 5 DYYAVLGVSKKASEEEIKKAFRKLARKYHPDMNP-DNAAAEKKFKELSEAYEVLSDAKKRKEYDAYGETFQQPGGGFHSHPGAGAYGFDLNDLFGGRTGGGRSRTFTSGGNSADIFSDLFAG 125 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162929 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4933 ID=mRNA_4933|Name=jgi.p|Trimin1|162929|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=417bp|location=Sequence derived from alignment at Contig_23:635827..636609- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GACTTCTACAAGGTACTCGGCGTACCACAATCTGCAACCGAACGGCAGATback to top protein sequence of jgi.p|Trimin1|162929 >Trimin1|162929|e_gw1.23.193.1 ID=Trimin1|162929|e_gw1.23.193.1|Name=jgi.p|Trimin1|162929|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=139bp DFYKVLGVPQSATERQIKDAYRELAKQWHPDKNPQDKEAANKRFAEISEAback to top mRNA from alignment at Contig_23:635827..636609- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4933 ID=mRNA_4933|Name=jgi.p|Trimin1|162929|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=783bp|location=Sequence derived from alignment at Contig_23:635827..636609- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_23:635827..636609- >mRNA_4933 ID=mRNA_4933|Name=jgi.p|Trimin1|162929|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=417bp|location=Sequence derived from alignment at Contig_23:635827..636609- (Tribonema minus UTEX_B_3156 )back to top |