mRNA_4833 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|149384
Unique NamemRNA_4833
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A836CMF8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF8_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.080e-92
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            LRVIQRNLVYVIGLGPGITAGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI
Sbjct:    1 LRVIQRNLVYVIGLGPGITAGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 127          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: D7FX15_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX15_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.110e-55
Identity = 88/128 (68.75%), Postives = 101/128 (78.91%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGIT-AGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            LRV++RNLVY IGL P          P YFGQYG IAK+V+NHH GV  DDPR+GSASAY+TF  +EDAW+A+ +VDGF L GR +RASFGTTKYCNSFLR L CNN DCLYLHELGDE DRFTK+E+
Sbjct:   72 LRVVRRNLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKDEV 199          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A6H5JE06_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE06_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.420e-52
Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGIT-AGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTK 372
            LRV++R LVY IGL P          P YFGQYG IAK+V+NHH GV  DDPR+GSASAY+TF  +EDAW+A+ +VDGF L GR +RASFGTTKYCNSFLR L CNN DCLYLHELGDE DRFTK
Sbjct:   71 LRVVRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTK 195          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 179 bits (453), Expect = 4.200e-51
Identity = 86/128 (67.19%), Postives = 101/128 (78.91%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGE-AASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            +RVIQRNLVYVIGL   I + E      +FGQYGRI K+VVNH+HG    DPRHGSASAY+TF HK+DA SAI+AVDG+  +GR +RASFGTTKYCN+FLR L C N +CLYLHELGD  DR+T+EEI
Sbjct:  114 VRVIQRNLVYVIGLPLSIASEEDLRRGEFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEI 241          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.450e-50
Identity = 85/132 (64.39%), Postives = 104/132 (78.79%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGEAASP-PYFGQYGRIAKIVVNHHHGVNADDPRHGSAS----AYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            +RV+QRNLVYVIG+ P I + E      YFGQ+G+I K+VVN +H   + DPR+ SAS    AY+TFAHKEDA + I+AVDGFW++GR+VRASFGTTKYCNSFLR L+C N DCLYLHELG+E D FTKE+I
Sbjct:  154 IRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQI 285          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS)

HSP 1 Score: 160 bits (406), Expect = 1.700e-47
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGEAA-SPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEE 378
            +RVI+RNLVY +G+ P I   E    P YFGQYG+IAKIV+N +H  N  DPR  SASAYVTF HKED  + I A+DGF+ +GR++RAS+GT+KYC++F++ + CNN DC YLH +GD+ D FTK+E
Sbjct:   90 MRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNH--NPGDPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A835Z6B5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 5.110e-45
Identity = 108/262 (41.22%), Postives = 114/262 (43.51%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGEAASPPYFGQYGRIAKIV-------------------------------------------VNHHHGVNADDPRHGSASAYVTFAHK-------------------------------------------------------EDAWSAIKAVDGFWLEGRH-------------------------------------VRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            LRVIQRNLVYVIGL P I+AGEAA+ PYFGQYGRIAK+                                                 GV+ DDPRHGSASAYVTF +K                                                       EDAWSAIKA+DG WLE RH                                     VRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI
Sbjct:  208 LRVIQRNLVYVIGLSPSISAGEAAAAPYFGQYGRIAKVTRRPVASVLRARWCGLQRAACEACRADDLLXXXXXXXXXXXXXXXXXXXGVSEDDPRHGSASAYVTFVYKDARMRHLQVPGELSGVTGLSAVAGRADALARGCGLADAFHTAMLGSSQPQGRVHAEDAWSAIKAIDGLWLEERHEGXXXXXXXXXXXXLASSEXXXXXXXXXXXXXXXXXXVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 469          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: K0T133_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T133_THAOC)

HSP 1 Score: 163 bits (412), Expect = 3.360e-44
Identity = 75/128 (58.59%), Postives = 99/128 (77.34%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGE-AASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            +RVI+RNLVY +GL P +   E    P YFGQYG+IAK+VVN +H  N  DPR  SASAYVTF+HKEDA + I A+DGF+ +GR+VRAS+GT+KYC++F++ + CNN DC YLH +G++ D FTK+EI
Sbjct:  202 MRVIRRNLVYAVGLPPNVATEENLRRPEYFGQYGKIAKVVVNRNH--NPGDPRRSSASAYVTFSHKEDALACILALDGFYHDGRNVRASYGTSKYCSAFIKSVRCNNPDCTYLHHMGEKEDTFTKQEI 327          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.750e-44
Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGE-AASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDE 354
            L ++QRNLVYV+GL P   + E    P +FGQ+G+I K+V N + G+   D RHGSASAY++F H+EDA + I +VDGF LEGR V+A+FGTTKYCNSFLR L CNN +C+YLHELGDE
Sbjct:   94 LPLVQRNLVYVVGLPPVAASEEYIRRPEWFGQFGKINKVVANLNQGLPPGDARHGSASAYISFVHREDARACIHSVDGFVLEGRTVKANFGTTKYCNSFLRHLPCNNNECMYLHELGDE 212          
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Match: D7FLE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE0_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 7.780e-44
Identity = 76/128 (59.38%), Postives = 94/128 (73.44%), Query Frame = 1
Query:    1 LRVIQRNLVYVIGLGPGITAGEAAS-PPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 381
            +RV+QRNLVY  GL  G+ + E    P  FGQYG+I KI ++      A +PR G+ SA++TFAHKEDA + I A DGFWLEGR +R++FGTTKYC ++LR   C+N DCLYLHELGDE DRFTKEEI
Sbjct:  161 MRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAIS---VSQASEPRPGNFSAHITFAHKEDALACILATDGFWLEGRQLRSNFGTTKYCATYLRNSPCSNPDCLYLHELGDEEDRFTKEEI 285          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149384 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMF8_9STRA2.080e-92100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7FX15_ECTSI3.110e-5568.75RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE06_9PHAE2.420e-5268.80RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S4D5P1_HETAK4.200e-5167.19Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2GN38_9STRA7.450e-5064.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8BXU6_THAPS1.700e-4757.48Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A835Z6B5_9STRA5.110e-4541.22C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
K0T133_THAOC3.360e-4458.59Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YKN6_9STRA3.750e-4460.50RING/Ubox like zinc-binding domain-containing prot... [more]
D7FLE0_ECTSI7.780e-4459.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:1337473..1340096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|149384|gw1.11.187.1
BRITEko00000,ko00001,ko01000,ko03019,ko04121
KEGG Pathwayko03018,map03018
KEGG koko:K10643
EC2.3.2.27
GOsGO:0000075,GO:0000077,GO:0000278,GO:0000288,GO:0000289,GO:0000956,GO:0002682,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010948,GO:0016070,GO:0016071,GO:0016567,GO:0016740,GO:0019222,GO:0019439,GO:0019538,GO:0019787,GO:0019941,GO:0022402,GO:0023052,GO:0030163,GO:0030330,GO:0031570,GO:0031571,GO:0032446,GO:0033554,GO:0034641,GO:0034655,GO:0035556,GO:0036211,GO:0042770,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045595,GO:0045637,GO:0045652,GO:0045786,GO:0045787,GO:0045930,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051603,GO:0051716,GO:0051726,GO:0051865,GO:0060255,GO:0065007,GO:0070647,GO:0071156,GO:0071158,GO:0071704,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0090068,GO:0090304,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902806,GO:1902807,GO:1903047,GO:1903706,GO:2000026,GO:2000045,GO:2000134
Descriptionnuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5175@1|root,KOG2068@2759|Eukaryota
Evalue5.1e-56
Seed ortholog2880.D7FX15
Hectar predicted targeting categoryother localisation
TranscriptId149706
TrackFilteredModels1
ProteinId149384
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149384gene_4833Tribonema minus UTEX_B_3156 geneContig_11 1337473..1340096 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149384Trimin1|149384|gw1.11.187.1Tribonema minus UTEX_B_3156 polypeptideContig_11 1337473..1340096 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4833_3exon_4833_3Tribonema minus UTEX_B_3156 exonContig_11 1337473..1337658 -
exon_4833_2exon_4833_2Tribonema minus UTEX_B_3156 exonContig_11 1338660..1338743 -
exon_4833_1exon_4833_1Tribonema minus UTEX_B_3156 exonContig_11 1339986..1340096 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4833CDS_4833Tribonema minus UTEX_B_3156 CDSContig_11 1339986..1340096 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4833 ID=mRNA_4833|Name=jgi.p|Trimin1|149384|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=381bp|location=Sequence derived from alignment at Contig_11:1337473..1340096- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCGCGTGATCCAGCGCAACCTGGTCTACGTCATTGGGCTCGGCCCCGG
CATCACCGCGGGCGAGGCGGCGTCGCCGCCGTACTTTGGCCAGTACGGGC
GCATCGCAAAGATAGTGGTGAACCACCACCACGGCGTCAACGCGGACGAC
CCGCGCCACGGCAGCGCGAGCGCCTACGTCACATTTGCACACAAGGAGGA
CGCGTGGAGCGCGATCAAGGCGGTGGACGGGTTCTGGCTCGAGGGGCGCC
ACGTGCGCGCGTCGTTCGGAACCACCAAGTACTGCAACTCATTCCTGCGC
GGGCTCGCGTGCAACAACGGCGACTGCCTGTACCTGCACGAGCTCGGCGA
CGAGCGCGACCGCTTCACCAAAGAGGAGATC
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protein sequence of jgi.p|Trimin1|149384

>Trimin1|149384|gw1.11.187.1 ID=Trimin1|149384|gw1.11.187.1|Name=jgi.p|Trimin1|149384|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=127bp
LRVIQRNLVYVIGLGPGITAGEAASPPYFGQYGRIAKIVVNHHHGVNADD
PRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLR
GLACNNGDCLYLHELGDERDRFTKEEI
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mRNA from alignment at Contig_11:1337473..1340096-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4833 ID=mRNA_4833|Name=jgi.p|Trimin1|149384|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2624bp|location=Sequence derived from alignment at Contig_11:1337473..1340096- (Tribonema minus UTEX_B_3156 )
CTGCGCGTGATCCAGCGCAACCTGGTCTACGTCATTGGGCTCGGCCCCGG CATCACCGCGGGCGAGGCGGCGTCGCCGCCGTACTTTGGCCAGTACGGGC GCATCGCAAAGGTATGTATGAGGTGGCGACGCACCGCATTTGAACCGTTG AAGTTTGTGAAACTTCGAGTCGTAATCACTCTGAGACTAGGGGTACGTGG CAGGCTTCTGCGAGGTGTAGCACAGGGTTGTTGTGATTTCACATGTGTGT CTATGCTGAGCATGTTTCATTTTCGCCACATTTCGAACATACACAAGTGC CTTGCAACGGCACGCACGGCTGGTGAAATGGCCAATAAGAACGCCTCGTG AAGGCACGCCGTCCACAGGGCTGCACTCAATGATGAGTGTCGCAAAGGCA TGCGCCAACGCCGCGCCGTGGCGGTCACACACCGCGTGTAGAAGTGCGTT CAATTTGCAGTTGCGCATGTCAGCACGCGGAGCGAGTGGCCCTTGCATTC TCAACGCTGACAGCCTCTTCTCCTAGTACCCACTTTTGAGGTTATGCAAC GACTTAGGGTTAGGGTTAGGGTTAGGTCAAGTACAAGTACGGCGGTTCAG GGTAGGTATGTAGTGCTGCCCTGCGGCCGCAGCGTGCGCTGCTAGCGATC TGTCGCCCAGCTTTCACATCGCCCAGTGCAGACTTTGAAGGGTAGATGTG CGTGGCTTTCGATGTCTGCACCACCGTCGACCACTCTTGCAGGCACCCTG TCACGCACGTCAGTTGCTAAGTGCGAGCGCTTGGCGCAGTGCCGCCAGCC GCCAACTCGCTGTGACAGCACTCGCGCTACTGCGGCGGTCTGAACGCGCG TCGAGTGCTCCTGGCAGTGACACTCCTGAAGTTGAAGTTTGTGTTGTGTG CTACATGAAAGTACATTTAAAACGACTGTCATTTGCATGTTGCGATTCTT GCGCCGCCCTTACCGATATTTCGTCGGCGGTCCGAACGCGCGGCGAGCGC TTCCGCAGTGACGCTCCTGAAGTTGAACTTTATGTTCCGTGCTACATGAA AGCTACGCTGTGCAAACCGCCGCTGATTTGCATGATGGAAATCTTGCGCC CACCCCTCACCAATACTCACACACAATCCCCGCGTGCCAACATTCCAACA CTGCCGTCGTGCAGGTAGTGGTGAACCACCCCCACGGCGTCAACGCGCAG CGGTGCTTCAGGCAGTGACACTCCTGAAGTTGACGTTTGTGCCCCGTGCT CTACAGAAGTGCATAGTCGCCCCCTGTGCTTTGCAGGTTGCGATTCTTGC GCCGCCCTCACTGGTACCTCGACGCTGCTGTCGGCCTCCGCACGCGCGTG CAGATAGTGGTGAACCACCACCACGGCGTCAACGCGGACGACCCGCGCCA CGGCAGCGCGAGCGCCTACGTCACATTTGCACACAAGGTACGAAATGATA ATCGGCGGAATTTGAAGTGCGGCATGCGAGGACTAGTGTTCTGCACGCTG AATGACGCATGCGCATCATGCGCTGCTGCACAGCATGTATGTATGCATGA CTAAACACCACCGCGGCAGCGCGAGCGCCTACGTCACGTTCGTCCGCAGA GAATGTACGTACGTGCGTATGCGAGACACGCGCAGCTGCTGCCGCATGGT ATATAGAAGTATGTTCGCATCATGTATGTATGCATCGCGGGCCGCCACTG CGTGGCGTGGAAGCATATGAATTGCGCCGCAGCAGGGCGAGCACGTATGT CACAATTGTCCACAAGGTATGTACATGTGTGCATCCCTTGGTTTTGGACG TGTAGCGGCAGATGGTGCATGGAGCGGCAGAGAATGCATGGAGTGCCATA ACGGTTGTGATCCTACCCGGAGGGTCCTGGCATGACAGATCAGCGCGTCG GGATGTGCAGGTGTTGCTCACCTCCCTGCAGTACGCACAGTCGCTCGCAC ATCACCTTCAACATGCAGAACTCGAACAGCAGCTGTCGCCTGGATGCTTG TGCACCAGGTCAGTGATGAGTGCACGACGCCTTTCTCGACCTTCAATCCT CAACTGTGCCGCAACGCATGGATCGCCATTGGGGCGGTCGAACGTCCCAA CTTCAACTTGCACTTGAACTTGCAGTGATACCTCACGTTGTCTGTTGGAG CACGCACTGGTGGAGCACACACTGTTGAGTCAGCAGTGACGTGAATGCTT TCAATGCCAATCTTCAACTGTGACGCGCAGGAGGACGCGTGGAGCGCGAT CAAGGCGGTGGACGGGTATTGGCTCGAGAGGCGCCACGTGCGCGCGCCGT TCAATTGCGCCTCAACTTCAATCATAGCACTTGAACTTGTGGTGGCAGTA CCTCAGCTCACCCGTTGCAGCACGCATGTTGGCGTTCGCATCGGCAAGAA TGCTCCCTTCAACTTCAATCTTCAACTGTGACGCGCAGGAGGACGCGTGG AGCGCGATCAAGGCGGTGGACGGGTTCTGGCTCGAGGGGCGCCACGTGCG CGCGTCGTTCGGAACCACCAAGTACTGCAACTCATTCCTGCGCGGGCTCG CGTGCAACAACGGCGACTGCCTGTACCTGCACGAGCTCGGCGACGAGCGC GACCGCTTCACCAAAGAGGAGATC
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Coding sequence (CDS) from alignment at Contig_11:1337473..1340096-

>mRNA_4833 ID=mRNA_4833|Name=jgi.p|Trimin1|149384|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=381bp|location=Sequence derived from alignment at Contig_11:1337473..1340096- (Tribonema minus UTEX_B_3156 )
CTGCGCGTGATCCAGCGCAACCTGGTCTACGTCATTGGGCTCGGCCCCGG
CATCACCGCGGGCGAGGCGGCGTCGCCGCCGTACTTTGGCCAGTACGGGC
GCATCGCAAAGATAGTGGTGAACCACCACCACGGCGTCAACGCGGACGAC
CCGCGCCACGGCAGCGCGAGCGCCTACGTCACATTTGCACACAAGGAGGA
CGCGTGGAGCGCGATCAAGGCGGTGGACGGGTTCTGGCTCGAGGGGCGCC
ACGTGCGCGCGTCGTTCGGAACCACCAAGTACTGCAACTCATTCCTGCGC
GGGCTCGCGTGCAACAACGGCGACTGCCTGTACCTGCACGAGCTCGGCGA
CGAGCGCGACCGCTTCACCAAAGAGGAGATC
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