mRNA_4709 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|159934
Unique Name	mRNA_4709
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA)

HSP 1 Score: 1022 bits (2643), Expect = 0.000e+0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1

Query:    1 MEEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDALMQQQQQRQ 1575
            MEEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDALMQQQQQRQ
Sbjct:    1 MEEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDALMQQQQQRQ 525

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: D7FXI8_ECTSI (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI8_ECTSI)

HSP 1 Score: 500 bits (1287), Expect = 6.620e-170
Identity = 280/527 (53.13%), Postives = 345/527 (65.46%), Query Frame = 1

Query:    4 EEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDD-DAAIIATLASCQQP-TGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLG---------EVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDAL 1551
            EE Y     +TDG  T T+  Q+ECER C ++ LPL    L D+E+ EF ++GI+N +G+ VLMR KH  YL +GL  L  GF++LDASRPW++YWI HSLDLL+     +    I+ T+ SCQ    GGFGGGPQQL HCAP YA+VL+LL+LGT  AY+ ++RSALYR F S+KH SGGFRMH+DGEVD RGTYTVI++A+LLN+LTPEL +GVA++    QTYEGGFGGEP NEAHGGY FCAFA+L ILG    A L+ L  WLC RQMR EGGFQGRTNKLVDGCYSFWQGG +A+L+YV  GR  EV+           R   G                  XXXXXXXXXXXXXXXXXX    +  PE P ++G          V+ G DG R    +   G                       L ++++ LQ YVL+C+QQ +GGLRDKPGK RDFYHTCY LSGLSV QHCL+ +P+V+G+S+N L PTNP+YNI E K   A+++F  LP +H  L
Sbjct:   17 EEAYSYPSTETDGISTATSRQQSECERMCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRTKHEVYLMRGLCGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTQRILRTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERSALYRLFMSLKHASGGFRMHDDGEVDARGTYTVIAVASLLNMLTPELSEGVADFAARCQTYEGGFGGEPWNEAHGGYTFCAFASLVILGAGERADLEGLRHWLCARQMRAEGGFQGRTNKLVDGCYSFWQGGAVAILDYVTAGRESEVSH----------RDSSGRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQGMQDPEPPKVVGVRVEESAVGTVEGGGDGVREMETLEVGGXXXXXXXXXXXXXXXXXXXXXXXLVFSRKRLQEYVLMCSQQSDGGLRDKPGKPRDFYHTCYTLSGLSVAQHCLSSSPTVVGNSSNLLRPTNPVYNIAEDKVLRAISYFQALPSDHATL 533

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: W7TZN2_9STRA (Protein farnesyltransferase subunit beta n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZN2_9STRA)

HSP 1 Score: 403 bits (1035), Expect = 1.990e-132
Identity = 240/530 (45.28%), Postives = 292/530 (55.09%), Query Frame = 1

Query:   49 TRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNAL--------RSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELL---KYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILP-EVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQ----HCLTET-----------PSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKL-PCEHDALM 1554
            TRT  +QAECE +CT  +      D S +  L  Q  G+ N+SGDI L+R +H+AYL KGL  L  GF+ LDASRPW+ YWI HSLDLL  L        R+D    +  T+ SCQ   GGFGGGP Q++HCAPTYAAVL LL+LGTE AY  +DR ALY++F + KH SGGF MH+DGEVDVRGTYTVISIA++LN+LTP+L  GV EY+L+ QTYEGGFGGE   EAHGGY FCAFA L IL       L SL+ W+  RQM +EGGFQGRTNKLVDGCYSFWQG T  L+E    G      ++   KE              G   L     Y +++                         +  ++P +     +G  G+  C   HA                                LQRY+L CAQ  +GGLRDKP K RDFYHTCYNLSGLS  Q      L E+           P V GD  N L  TNP+YNI + K   A+  F +  P  H+ L+
Sbjct:   18 TRTEEEQAECEASCTSLLNSWCNLDQSSRGKL--QASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKE------------NDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVG--GNLECLSQHA--------------------------------LQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLL 499

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: F0Y5G6_AURAN (Protein farnesyltransferase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5G6_AURAN)

HSP 1 Score: 397 bits (1019), Expect = 4.940e-132
Identity = 221/457 (48.36%), Postives = 256/457 (56.02%), Query Frame = 1

Query:  190 LMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQ-QPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPS--VLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDAL 1551
            LMR +H+AYL KGL  L   +VALDASRPW+ YWI H +DLL+AL  +     +ATLA C+ PTGG+GGGPQQLAHCAPTYAA L + +LGT  AY +VDR  LY F  S+K PSGGFRMH+DGEVDVRGTYT +++AAL N+LTPEL +G A Y L  QTYEGGFGGEPG EAHGGY FCA A L IL       LD+LE WL  RQ R+EGGFQGRTNKLVDGCYSFWQGGTLAL+ +VRRG                    H  S E                                                                                +P G+         R LQRY+LLCAQ  PEGGLRDKPGK RD+YHTCY LSGL+ +Q    +  S  V GD  N L  T+P++N+   K A A A FA LP  H  L
Sbjct:   10 LMRERHVAYLMKGLGGLGGSYVALDASRPWLCYWILHGMDLLDALPEEKIDDCVATLAKCRSPTGGYGGGPQQLAHCAPTYAASLAIAVLGTRRAYESVDRKGLYAFLLSMKDPSGGFRMHDDGEVDVRGTYTALAVAALFNVLTPELAEGAAAYALRCQTYEGGFGGEPGVEAHGGYVFCALAALVILNATDAVDLDALERWLARRQTRVEGGFQGRTNKLVDGCYSFWQGGTLALVAHVRRG--------------------HTRSDE--------------------------------------------------------------------------------APPGL---------RALQRYILLCAQVYPEGGLRDKPGKNRDYYHTCYCLSGLAASQRLYGDDASTVVYGDPGNLLHETHPVFNVRVDKVARAAAFFAGLPHTHAEL 357

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: A0A7S4ECU6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECU6_9STRA)

HSP 1 Score: 387 bits (993), Expect = 3.340e-127
Identity = 225/502 (44.82%), Postives = 280/502 (55.78%), Query Frame = 1

Query:   55 TTVDQAECERTCTVSMLPLHMDDLSD---QEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAI----IATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQ-PEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLP-TNPLYNITEVKAAMAMAHFAKLP 1533
            T ++Q ECE  C   ++    DD S     ++ + +  G+L+E     LMR KH+ YLRKGL  L  GFVALDASRPW++YWI H+LDLL AL  DDDA I    I+TL +C+   G FGGGP+QLAH APTYAA L L  +G+  A+  +DR ALY+F  S+K  S GFRMH+DGEVDVRGTYT I++AAL N+LTP+LV+GVAEY  + QTYEGGFGGEPG EAHGGY FCA ATL IL       LD+L+ W+  RQ  +EGG+QGR NKLVD CYSFWQGGT  L  + RRG                  P H E+P+      +++                               +VP                              T    +V P              LQRY+LLCAQ  P+GGLRDKPGK RD+YHTCY LSGLS +QH     P+ +  S   LLP T+P +N    K +  + HF+ LP
Sbjct:   12 TLLEQEECESVCARFLI----DDFSTVPAAQLAQMRREGLLDEENRPRLMREKHVQYLRKGLAGLSGGFVALDASRPWLVYWIIHALDLLEAL--DDDAEIKQRCISTLRACRAE-GAFGGGPRQLAHLAPTYAATLALCCIGSNEAFETIDRPALYQFLLSMKDASNGFRMHDDGEVDVRGTYTAIAVAALTNVLTPQLVEGVAEYAASCQTYEGGFGGEPGVEAHGGYGFCAIATLCILDACHLVDLDALDAWVARRQTSIEGGYQGRANKLVDACYSFWQGGTAQLSAHARRGD-----------------PHHIEAPQG-----VRWRPGTTSA------------------------DVPA----------------------------ATPIQEIVDPI------------KLQRYILLCAQVFPDGGLRDKPGKGRDYYHTCYALSGLSASQHPDCTAPATVSGSPANLLPRTHPAFNCRPEKVSRMLDHFSGLP 420

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: A0A7S2S187_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S187_9STRA)

HSP 1 Score: 385 bits (989), Expect = 9.390e-126
Identity = 226/490 (46.12%), Postives = 272/490 (55.51%), Query Frame = 1

Query:  184 IVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDA------------AIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGT------------------EAAYSAVDRSALYRFFTSIKHP-SGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQ-PEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTE-TPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEHDALM 1554
            I LMR +H+ YL KGL+ L A +V LDASRPW+ YWITH+LDLL+AL                   I+ +L+ CQ  TGGFGGG QQL+HCAP YAA L LL +G                   EAA+ A+DR A+Y +F S+K P SGGFRMH+DGEVDVRGTYTVI+I++LLNILTPEL +GVAE+ LA QTYEGGFGGEPG EAHGGY FCA A L +LGRA +A L SLE WL  RQ   EGGFQGR NKLVDGCYSFWQGGT ALL +           L   +    IR    + P+P +      HD +                          P+ PC                                             L ++   LQ+Y L+CAQQ PEGGLRDKPGK RD+YHTCYNLSGLS  QH  T+  P V GD++N L   +P +NI +  A  A+  F+  P  H  L+
Sbjct:   58 IRLMRERHVLYLLKGLQGLSASYVCLDASRPWLCYWITHALDLLDALHPARPLHHPQSTARGLRLRIVQSLSFCQNSTGGFGGGNQQLSHCAPNYAACLALLAIGAAGQTSPGETLSDEDLAVREAAWGAIDRVAMYSWFLSLKDPASGGFRMHDDGEVDVRGTYTVIAISSLLNILTPELTKGVAEFALACQTYEGGFGGEPGVEAHGGYVFCALAALALLGRAKEADLLSLERWLADRQTHHEGGFQGRANKLVDGCYSFWQGGTGALLAF-----------LNAPESCPPIRWTC-DQPDPSSQSRASGHDAVH-------------------------PDFPC--------------------------------------------GLCFDSTRLQQYTLICAQQFPEGGLRDKPGKPRDYYHTCYNLSGLSAAQHPPTKHDPVVWGDASNLLPEVHPAFNIRKTAAHQALEFFSSQPSGHATLL 466

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: K3WWW3_GLOUD (Protein farnesyltransferase subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWW3_GLOUD)

HSP 1 Score: 382 bits (982), Expect = 1.790e-125
Identity = 229/502 (45.62%), Postives = 269/502 (53.59%), Query Frame = 1

Query:   28 VQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKH-PSGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDAR-LDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTETPSVL-GDSANELLPTNPLYNITEVKAAMAMAHFA 1524
            V++DG  T+T +DQ ECE TC +   PLH  DL + + L+ QN G  N + +  LMR KHI +L++GL  LP+GFVALDASRPWI YWI H+L+LL+AL  +     I+T+       GGFGGGP QL H A  YA+ LTL L+GT  A   VDR ALYRFF   KH  SG F  HE GEVDVR TY VISIA+L  ILT EL +GV EYV + QTYEGGFGGEPGNEAHGGYAFCA ATL IL        L +   WL +RQM  EGG+QGRTNKLVDGCYSFWQG   ALL  V   + G                                                                                  Y  H                              Q  LQ+Y+LLC QQ EGGLRDKPGK RD YH+CY LSGLSV QH   + P V+ GD+AN L+PT+P YNI+  KA  A+A+FA
Sbjct:   30 VKSDGVATKTYMDQVECEETCGMFFFPLH--DLPEDQQLQLQNSGFTNAALEPRLMREKHIDFLKRGLLHLPSGFVALDASRPWICYWIFHALELLDALPVEYIDRTISTIKHFWHEDGGFGGGPAQLGHTATNYASCLTLALIGTPEALDLVDRHALYRFFMKRKHHESGAFSAHEGGEVDVRVTYCVISIASLFGILTEELTKGVVEYVASCQTYEGGFGGEPGNEAHGGYAFCAVATLWILKSVHCMTDLPAFVEWLANRQMPYEGGYQGRTNKLVDGCYSFWQGALPALLVDVLEEQYGTTV-------------------------------------------------------------------------------YQCH------------------------------QEQLQKYILLCGQQIEGGLRDKPGKPRDHYHSCYCLSGLSVAQHGGGKQPPVVFGDAANLLVPTHPAYNISREKAEHALAYFA 420

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: A0A3R7H5E8_9STRA (Protein farnesyltransferase subunit beta n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5E8_9STRA)

HSP 1 Score: 374 bits (960), Expect = 2.660e-122
Identity = 227/507 (44.77%), Postives = 272/507 (53.65%), Query Frame = 1

Query:   16 KRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASC--QQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPS-GGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDAR-LDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTE-TPSVLGDSANELLPTNPLYNITEVKAAMAMAHF 1521
            +R   + DG  TRT+ DQ ECE  C++   PL   DL   + L+ Q    +N   + +LMR KH+ +L +GL  L +GFVALDASRPWI+YWI H+L+LL+AL  +  A  IATL +C      GGFGGGP+QL H A  YA+ LTL LLGT  A   VDR ALYRFF S KH + G F  H+ GEVDVR TY V+SIA+L  ILT EL  GV +YVL+ QTYEGGFGGEPGNEAHGGYAFCA ATL IL      + L  L  WL +RQM  EGG+QGRTNKLVDGCYSFWQG   ALL  V R R G+                                                              +VP                Y  H                              +  LQ+Y+LLC QQ EGGLRDKPGK RD YH+CY LSGLSV QH     +P V GD++N +L T+P YNI   KA  ++A+F
Sbjct:   12 ERYGFKNDGLTTRTSTDQEECEVNCSLFFYPLP--DLPLDQQLQLQQLSFINTDLEPLLMRQKHVDFLSRGLTRLSSGFVALDASRPWIVYWILHALELLDALPKEQTARAIATLKTCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTPEALETVDRQALYRFFLSRKHAATGAFTAHDGGEVDVRVTYCVVSIASLYGILTDELKAGVVDYVLSCQTYEGGFGGEPGNEAHGGYAFCAVATLYILEAVDQIQDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGALPALLADVVRERYGD--------------------------------------------------------------DVP----------------YQCH------------------------------REQLQKYILLCGQQIEGGLRDKPGKPRDHYHSCYCLSGLSVAQHGDGRGSPIVFGDASNLVLRTHPAYNIGYDKAMKSIAYF 408

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BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: D0NST4_PHYIT (Protein farnesyltransferase subunit beta n=20 Tax=Phytophthora TaxID=4783 RepID=D0NST4_PHYIT)

HSP 1 Score: 370 bits (951), Expect = 5.830e-121
Identity = 223/504 (44.25%), Postives = 269/504 (53.37%), Query Frame = 1

Query:   31 QTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPT--GGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPS-GGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDAR-LDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTE-TPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAK 1527
            ++DG  TRT+VDQ +CE +C++   PL    L  Q  L+ Q   ++N   + +LMR KH+ YL++GL  LPAGFV+LDASRPWIIYW+ H+LDLL AL  ++   +I TL  C      GGFGGG +QL H A TYA+ LTL LLGT  A   VDR  LYRFF S KH + G F  H+ GEVDVR TY VISIA+L  ILT EL  GV +Y+L+ QTYEGGFGGEPGNEAHGGYAFC+ A L IL      R L  L  WL +RQM  EGG+QGRTNKLVDGCYSFWQG   ALL  V R R G+                                                              +VP                Y  H                              +  LQ+Y+LLC Q+  GGLRDKPGK RD YH+CY LSGLSV QH      P V GD++N +  T+P YNI+  KA  A+ +F K
Sbjct:   16 KSDGLTTRTSVDQEDCESSCSLFFFPLPELPLDQQ--LQLQQLSLVNTDLEPLLMREKHVKYLKRGLTRLPAGFVSLDASRPWIIYWVLHALDLLGALPEEETDRVIGTLKHCWNDDLDGGFGGGQKQLGHTATTYASCLTLALLGTPEALDTVDRHKLYRFFMSRKHAATGAFTAHDGGEVDVRVTYCVISIASLYGILTDELKTGVVDYILSCQTYEGGFGGEPGNEAHGGYAFCSVAALYILDAVDQIRDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAVPALLAEVVRERYGD--------------------------------------------------------------DVP----------------YQCH------------------------------REQLQKYILLCGQEITGGLRDKPGKPRDHYHSCYCLSGLSVAQHGEGRGKPVVYGDASNLVTRTHPAYNISYDKAMKAIEYFNK 409

[Close]

BLAST of jgi.p|Trimin1|159934 vs. uniprot
Match: A0A3M6VTJ6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTJ6_9STRA)

HSP 1 Score: 370 bits (950), Expect = 6.140e-121
Identity = 227/507 (44.77%), Postives = 267/507 (52.66%), Query Frame = 1

Query:   16 KRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASC--QQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHP-SGGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDAR-LDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTE-TPSVLGDSANELLPTNPLYNITEVKAAMAMAHF 1521
            +R   + DG  T T++DQ ECE +C++   PL    L+ Q  L+ Q    +N   + +LMR KH+ YL++GL  L +GFVALDASRPWIIYWI H+LDLL+AL  ++ A +I TL         GGFGGGP+QL H A  YA+ LTL LLGT  A+ AVDR  LYRFF + KH  SG F  H+ GE DVR TY VISIA+L  ILT EL  GV EYVL+ QTYEGGFGGEPGNEAHGGYAFC+ ATL IL      R L  L  WL +RQM  EGG+QGRTNKLVDGCYSFWQG   ALL  V R R G+                                                              EVP                Y  H                              Q  LQRY+LLC Q+  GGLRDKPGK RD YH+CY LSGLSV QH      P V GD +N +  T+P YNI   KA   + +F
Sbjct:    2 ERYRFKNDGLATHTSMDQEECENSCSLFFFPLLELPLNQQ--LQLQQLSFINTDLEPLLMREKHVEYLKRGLTRLSSGFVALDASRPWIIYWILHALDLLDALPEEETARVIDTLKPFWNNDHEGGFGGGPKQLGHTATNYASCLTLALLGTPEAWEAVDRPGLYRFFLARKHATSGAFTAHDGGEADVRVTYCVISIASLYGILTDELKDGVVEYVLSCQTYEGGFGGEPGNEAHGGYAFCSVATLYILEAIDQIRDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAVPALLAQVVRQRYGD--------------------------------------------------------------EVP----------------YQCH------------------------------QEKLQRYILLCGQEITGGLRDKPGKPRDHYHSCYCLSGLSVAQHGDGRGEPVVYGDVSNLMKRTHPAYNINYDKAMKTIEYF 398

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|159934 vs. uniprot

BLAST of jgi.p|Trimin1|159934 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CMB6_9STRA	0.000e+0	100.00	Protein farnesyltransferase subunit beta n=1 Tax=T...	[more]
D7FXI8_ECTSI	6.620e-170	53.13	Protein farnesyltransferase subunit beta n=1 Tax=E...	[more]
W7TZN2_9STRA	1.990e-132	45.28	Protein farnesyltransferase subunit beta n=2 Tax=N...	[more]
F0Y5G6_AURAN	4.940e-132	48.36	Protein farnesyltransferase subunit beta n=1 Tax=A...	[more]
A0A7S4ECU6_9STRA	3.340e-127	44.82	Protein farnesyltransferase subunit beta n=1 Tax=P...	[more]
A0A7S2S187_9STRA	9.390e-126	46.12	Protein farnesyltransferase subunit beta n=1 Tax=R...	[more]
K3WWW3_GLOUD	1.790e-125	45.62	Protein farnesyltransferase subunit beta n=1 Tax=G...	[more]
A0A3R7H5E8_9STRA	2.660e-122	44.77	Protein farnesyltransferase subunit beta n=3 Tax=P...	[more]
D0NST4_PHYIT	5.830e-121	44.25	Protein farnesyltransferase subunit beta n=20 Tax=...	[more]
A0A3M6VTJ6_9STRA	6.140e-121	44.77	Protein farnesyltransferase subunit beta n=1 Tax=P...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_11	contig	Contig_11:182874..188454 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|159934\|e_gw1.11.230.1
BRITE	ko00000,ko00001,ko01000,ko01006
KEGG rclass	RC00069,RC03004
KEGG Reaction	R09844
KEGG Pathway	ko00900,ko01130,map00900,map01130
KEGG ko	ko:K05954
EC	2.5.1.58
GOs	GO:0001101,GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0004660,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005875,GO:0005965,GO:0006464,GO:0006807,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0008285,GO:0008318,GO:0009414,GO:0009415,GO:0009611,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009787,GO:0009788,GO:0009889,GO:0009891,GO:0009893,GO:0009934,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010118,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0010648,GO:0014070,GO:0015630,GO:0016740,GO:0016765,GO:0018342,GO:0018343,GO:0019222,GO:0019538,GO:0022603,GO:0023051,GO:0023057,GO:0032991,GO:0033036,GO:0033993,GO:0034097,GO:0034613,GO:0036211,GO:0042060,GO:0042127,GO:0042221,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045787,GO:0046872,GO:0046914,GO:0048145,GO:0048146,GO:0048509,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051641,GO:0051726,GO:0051769,GO:0051770,GO:0060255,GO:0065007,GO:0070727,GO:0071704,GO:0072657,GO:0072659,GO:0097305,GO:0097354,GO:0140096,GO:1901419,GO:1901420,GO:1901564,GO:1901700,GO:1902494,GO:1905957,GO:1905958,GO:1990069,GO:1990234,GO:1990778
Preferred name	FNTB
Description	protein farnesylation
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5029@1\|root,KOG0365@2759\|Eukaryota
Evalue	1.09e-170
Seed ortholog	2880.D7FXI8
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Protein farnesyltransferase subunit beta
Ec32 ortholog	Ec-28_001820.1
TranscriptId	160256
Track	FilteredModels1
ProteinId	159934

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|159934	gene_4709	Tribonema minus UTEX_B_3156	gene	Contig_11 182874..188454 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|159934	Trimin1\|159934\|e_gw1.11.230.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_11 182874..188454 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4709_1	exon_4709_1	Tribonema minus UTEX_B_3156	exon	Contig_11 182874..183640 +
exon_4709_2	exon_4709_2	Tribonema minus UTEX_B_3156	exon	Contig_11 184898..185176 +
exon_4709_3	exon_4709_3	Tribonema minus UTEX_B_3156	exon	Contig_11 185219..185323 +
exon_4709_4	exon_4709_4	Tribonema minus UTEX_B_3156	exon	Contig_11 186302..186347 +
exon_4709_5	exon_4709_5	Tribonema minus UTEX_B_3156	exon	Contig_11 186485..186631 +
exon_4709_6	exon_4709_6	Tribonema minus UTEX_B_3156	exon	Contig_11 187689..187764 +
exon_4709_7	exon_4709_7	Tribonema minus UTEX_B_3156	exon	Contig_11 188297..188454 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4709	CDS_4709	Tribonema minus UTEX_B_3156	CDS	Contig_11 182874..183640 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_11:182874..188454+
coding sequence from alignment at Contig_11:182874..188454+

spliced messenger RNA

>mRNA_4709 ID=mRNA_4709|Name=jgi.p|Trimin1|159934|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1578bp|location=Sequence derived from alignment at Contig_11:182874..188454+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGAGTACTACAAGCGACTGGAGGTGCAGACAGATGGCTGCCCCAC
CCGCACCACAGTGGATCAAGCGGAGTGCGAGCGCACCTGCACCGTGAGCA
TGCTACCACTGCACATGGACGATCTCTCGGATCAGGAGGTGCTGGAATTC
CAGAACAGGGGCATTCTGAACGAGTCCGGCGACATCGTGCTCATGAGAGC
CAAGCACATTGCCTATCTGCGCAAAGGGCTGAAGGTGCTGCCAGCGGGCT
TTGTCGCACTCGACGCCAGCCGACCCTGGATCATCTACTGGATCACCCAC
TCCCTGGATCTGCTCAATGCCCTGCGCTCAGATGATGACGCAGCCATCAT
AGCCACACTGGCCAGCTGCCAGCAGCCCACGGGAGGGTTCGGCGGGGGCC
CCCAGCAACTGGCGCACTGCGCTCCCACCTACGCAGCGGTGCTGACGCTG
CTGCTGCTGGGCACAGAGGCTGCCTACAGCGCCGTGGATCGTTCCGCGCT
GTACCGCTTCTTCACGTCCATCAAGCACCCCAGCGGGGGCTTCAGGATGC
ACGAGGACGGCGAGGTGGATGTTCGGGGCACCTATACGGTGATCTCCATT
GCAGCACTGCTCAACATCCTGACCCCAGAGCTGGTGCAGGGGGTGGCGGA
GTATGTGCTGGCGGCGCAGACGTACGAGGGGGGGTTCGGGGGGGAGCCGG
GGAACGAGGCGCACGGGGGCTACGCGTTTTGCGCTTTTGCCACGCTGGGT
ATACTCGGGCGCGCGAGCGACGCCCGGCTGGACTCCCTGGAGTGGTGGCT
GTGCCACCGCCAGATGCGCCTGGAAGGGGGTTTTCAGGGGCGCACCAACA
AGCTTGTCGATGGCTGCTACTCATTCTGGCAGGGGGGCACGCTGGCGCTG
CTGGAGTACGTGCGCAGGGGGCGCATTGGGGAGGTGACGCTGCTCAGGGG
GGGGAAAGAGGGGGGGGCGATTAGGCCAGAGCACGGCGAAAGTCCAGAGC
CAGGTAATTTTGAGCTGTTGAAGTACCATGATAACATTATGCTGGAGGGG
GGAAAAGAAGGTGGGGCGATTAGGCCGGAGCACGGCGAAAGTCCAGAGCC
AGGTAACGTCATACTTCCTGAAGTCCCATGTATGCTTGGGGAGGTAAAGT
TAGGAGCAGATGGGAGCAGACGGTGTTACTACGTTCATGCACATGGTCAA
ATGGGGGCCGATGGCGTGACCACGTTCATGCACATGGTGTCGCCAGCGGG
CGTGCACAGCGGCGCGCTTGCCTACAATCAGCGCGACCTGCAGCGCTACG
TACTGCTCTGTGCGCAGCAGCCGGAGGGCGGGCTGCGAGACAAGCCCGGC
AAGACGCGAGACTTCTACCACACATGCTACAACCTGAGCGGACTCTCTGT
CACACAGCACTGCCTGACAGAGACGCCCAGCGTTCTCGGCGATAGCGCCA
ACGAGCTGCTGCCGACTAACCCGCTCTACAACATTACGGAGGTCAAGGCT
GCAATGGCCATGGCGCACTTTGCGAAACTGCCGTGCGAGCACGATGCCCT
CATGCAGCAGCAGCAGCAGCGGCAATAA

protein sequence of jgi.p|Trimin1|159934

>Trimin1|159934|e_gw1.11.230.1 ID=Trimin1|159934|e_gw1.11.230.1|Name=jgi.p|Trimin1|159934|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp
MEEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEF
QNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITH
SLDLLNALRSDDDAAIIATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTL
LLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISI
AALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLG
ILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLAL
LEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMLEG
GKEGGAIRPEHGESPEPGNVILPEVPCMLGEVKLGADGSRRCYYVHAHGQ
MGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPG
KTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLYNITEVKA
AMAMAHFAKLPCEHDALMQQQQQRQ*

mRNA from alignment at Contig_11:182874..188454+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4709 ID=mRNA_4709|Name=jgi.p|Trimin1|159934|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5581bp|location=Sequence derived from alignment at Contig_11:182874..188454+ (Tribonema minus UTEX_B_3156 )
ATGGAGGAGTACTACAAGCGACTGGAGGTGCAGACAGATGGCTGCCCCAC
CCGCACCACAGTGGATCAAGCGGAGTGCGAGCGCACCTGCACCGTGAGCA
TGCTACCACTGCACATGGACGATCTCTCGGATCAGGAGGTGCTGGAATTC
CAGAACAGGGGCATTCTGAACGAGTCCGGCGACATCGTGCTCATGAGAGC
CAAGCACATTGCCTATCTGCGCAAAGGGCTGAAGGTGCTGCCAGCGGGCT
TTGTCGCACTCGACGCCAGCCGACCCTGGATCATCTACTGGATCACCCAC
TCCCTGGATCTGCTCAATGCCCTGCGCTCAGATGATGACGCAGCCATCAT
AGCCACACTGGCCAGCTGCCAGCAGCCCACGGGAGGGTTCGGCGGGGGCC
CCCAGCAACTGGCGCACTGCGCTCCCACCTACGCAGCGGTGCTGACGCTG
CTGCTGCTGGGCACAGAGGCTGCCTACAGCGCCGTGGATCGTTCCGCGCT
GTACCGCTTCTTCACGTCCATCAAGCACCCCAGCGGGGGCTTCAGGATGC
ACGAGGACGGCGAGGTGGATGTTCGGGGCACCTATACGGTGATCTCCATT
GCAGCACTGCTCAACATCCTGACCCCAGAGCTGGTGCAGGGGGTGGCGGA
GTATGTGCTGGCGGCGCAGACGTACGAGGGGGGGTTCGGGGGGGAGCCGG
GGAACGAGGCGCACGGGGGCTACGCGTTTTGCGCTTTTGCCACGCTGGGT
ATACTCGGGCGCGCGAGGTGAGTGGCAGGATCTGTTGCAGGATTTGTTGT
CTTACACATGGAGAAGCAGGTGAGGCGGACATGACTCAGGAAGAAACTTG
CAGCCTCAATGGGGTGCTCACTTGGCTGTTGATGTTGATGCGATTGTCAG
CGGTTGGCTTACTGCAAGTGCGACGCTCCTCCTTAACTCTGTTGCTGTGA
CGTGTGATGCGAGCACTGCCGCACTAACATCGCAACAGCGTGCACACTCA
ACGAGGGGGCTTCTTGCAAGCTTAGTGCTCTTCCATCACAACGGCAAAGC
TGAAACAGGCAGCATCGACTGCTGTCTCAGGGTTGAGGTCAGGCTTAGTC
CTAGCCCTAACCCATTTTGCACTTCCGCAGTTATAACTGTGCATCTCTTG
CTTTGTGTGTGTTTCGTTCGTGTGTGTGTCCACATTGCAGCAATGCGCGG
CTCGACTCGCTGAAGTGGTGACGTGCCACCATCAGCGCTCAGCAACCGGT
ACCATGATTACGAGCGCTGTTGCCACTGCACGCAGTGCGCACGCGCGCTT
TCATGCATCTACTGAGCATCTCACCGTCAAGCGGCTCGTCCCATGCTCTT
GTGAAGGTTCTCTCCTCCCAGCATGGCGACTGAGCCTCGCACCGGTGTAA
GACCTACATACATGCAGGCCATAAACTTATGTGCGTGTGTGTGTGCATGC
CTTTACTTCGCAGCGACGCCGTTCTGGACTCTCTGGAGTGTGGTGGCTGT
AACACCAATGACCTCAGCAACTGATACCATGACTATCAGCGCTGATAACA
TGGCACACAGTGCTCACGCGCGCTTCCATGCATTTCAGCGACAAGCAACT
TGTTTAATGCTCTTGTGTGCGTGTGTGTGCATGTGTGCGTGCGTGTGTGT
GCATCCCTCTATTGCGCAGCGACGCACGGCTGGACTCCGTGGAGTGGTGG
CTGTCAGCGCTCAACAATTGATAAACAATTGATAAAGTCATTAATTGTGA
CTCTCCTCGAACACACTGCTGCACGCGTGTGCGCTTCCAGGGCCATCACA
TACTTTTGCGTGTACGTGTGCATCCCTCTTTTACACAGCGACGCGCGGCT
GGACTCCCTGGAATGGTGGCTGTGCCACCGCCAGTGCTCAGCAACTGATA
CATGACCTAGTAGCGCTGGCGCCACTGCACGCAGTGCGCATGCGCGCTTG
CACGGTTCTCTCATGCATCTCACCGTCAAGCGACTTGTCTCATGCTCTTG
TGTGTGCATCCCTCTATTATGCAGCGACGCCCGGCTGGACTCCCTGGAGT
GGTGGCTGTGCCACCGCCAGATGCGCCTGGAAGGGGGTTTTCAGGGGCGC
ACCAACAAGCTTGTCGATGGCTGCTACTCATTCTGGCAGGGGGGCACGCT
GGCGCTGCTGGAGTACGTGCGCAGGGGGCGCATTGGGGAGGTGACGCTGC
TCAGGGGGGGGAAAGAGGGGGGGGCGATTAGGCCAGAGCACGGCGAAAGT
CCAGAGCCAGGTAATTTTGAGCTGTTGAAGTACCATGATAACATTATGCT
GGAGTATGTGCGCAGGGGGCGCATCGGGTAGGTGACGCTCCTCAGGGGGG
GAAAAGAAGGTGGGGCGATTAGGCCGGAGCACGGCGAAAGTCCAGAGCCA
GGTAACGTCATACTTCCTGAAGTCCCATGTATGCTTGGGGAGGTAAAGTT
GTGCTTCTTGAAGTGCCATAACAGTATGTTGGAATTTGTGCGCAGGGGGC
GCATTGGGGAGGTGACGCTCCTCAGGGGGGGAAAAGAGGGGGTCAATCAG
GCCCGAGCAAGGCGACAGTCCAGGGCCAGATACTGTGTGCTTCTTGAAGT
ATCGTGATAACAGTATGCTGGAGTACGTGCGCAGGGGGCGCATTAGGGAG
GTGACGGTCCTCGGGGGGGGGGGGGGCTATGCGGGGGGAGGCGCGACCTG
AGCCAGGTAAGAGCTTACTCCAGGGTACTTTACCATAGTCTTACACGCTG
TAGTGCTGGGCACACATTCATGTTTCTTGAAGTACATGATAATAGTATGC
CGGAGGTCATCTGCGCGGAGCGCATTGGAGAGGTGACGCTCCTCGGTGCG
ATGCGCGCGATACGGCGCCAGCAACGTGGAGAGTTCAGAACCACAGTACA
TACCATGGTACAAATTGGAGTACGATTGGAGGGGGCGCATTTGACCTAAC
CCTAACCCTAACCCAAGTATGCGGAGGCGTTTACTGGAGAGGCGGACGTC
ACCACCCATGCTATGCATGCATGCCGAAAACAAAGTGTATCATGGCTCCT
GGAGAATGGTACCGTATGGCGGTGTGCGCTTCATACAGTGGCGTTTCTTT
TTTTGAGGGACACATACGCGTCGGCCTGCACAGAGGAGCAGACGGCGCAA
ATGCAGCGCCGTCCCGCAATGGAATTTGTGGAATCTGACTTCCTTTGCCC
TTCTTTGCGGTGATCGCCTCCTGCAGAGGAGCAGATGGGGGCAGACAGAC
GACGGGACTGCCTTCATGCACCTACTTGGGGGTACCCACTGAAACCCATG
CACGCCAACCTGTGTGTGCCCGTTTCACCCATGAATTCATTATATATTAC
ATGCACCAAGTGGGTCCAGCCCTGGTGATAAAAGTGTGTGTGCTGACTGT
ACCCCCTCTCTGTCCTGCTGTCGTGCAGAGGAGCAGATGGGAGCAGACGG
TGTTACTACGTTCATGCACATGGTGTCGGCAGCGGGCAGGCGGCACAAAT
GCAGCGCCATTTCGTAATGAAGTTCATGTATATGCTTACTTCCTTAGCCC
TAGTTTGTGTATGCTGACTTTCTTTGCCTTGTTTGCGGGGTGATCGCCTC
CTGCAGAGGAGCAAATGGGGGCCGATGGCGTGACCACGTTCATGCACATG
GTGTCGCCAGCGGGCGTGCACAGCGGCGCGCTTGCCTACAATCAGCGCGA
CCTGCAGCGCTACGTACTGCTCTGTGCGCAGCAGCCGGAGGGCGGGCTGC
GAGACAAGGTGCGCAAGCGCTGCTGAAGGTTTGGTTACTGGGAAAGAGTT
GAAGTTATGGTAGGGTTAGGGTTAGGGTTCGGTTGTTGGGGTTTTGGTAG
AGTTAGGGTTGCAATTAGATACAGTAGTAAGGTTAGTGACCTCCAGCGCT
ACGTGCTGTTTTGCGCGCAGCAGTTGAAGGGCAGGCTCCGAGACAAGGCG
AGGATGGCTGCTGAAAGTTTGGTTATAGTATTAGAGTTGGGGTGATGGTA
GGGTAAGGGTTGGAATTCGGCAGTAGGGGTAATGGTAAGGGTTACGGTTA
GAATCAGGCAGTAACGTTTGTGACCTCCAGCGCAACGTGCTGCTGTATGC
GCAGCAGCCAGATGGGGGCCTCAGAGACAAGGTGAGCGCTGCTGCTCAGG
GTTTGGTTGTTGGGGTTGTGGTAGGGTTTAGGTGGTAACGTTGTGACGCC
CAGCGCTACGTGTGGCAATGCATGCAGCAATTGGAGGGCGGGCTTTGAGA
CGAGGTGAGCGCTGCTGCTTAGGGTTAAGGGTAGCCCTAGGCTAGGGTTG
GAGGGGCATGAGCACCAGCTTCACCTGCACCGCTGCGCACTGCTGTGCGC
ACAGCAGCCGGAGGGGGGAACTCAGAGACAAGGTGAGCACGGCTGCTGAA
GGTTTGGTCTAGTGAATACGGTTAGAGTTGGGTCATGTTAGGGTTAGGGT
TAGGGTCAGGGTTAGGCAGTGGGGGTTATGGTGCGAACTAGAGTGGCCCT
GCTCAAGTGGAGATGGCCCCTCACTGTCAGCGTTGCTGTTTGCACAGCGC
AAGAACGTGTCAAGGTCTGGCTTAAGTCACCCAAGCAGCGATCATCCATT
GTGTGCGCTCTGACCGTGAACTTCAAATATGCCTTGAGAACTGACAGTGC
CGCTCTGCAGCACTTGAGGCATAGACTTTGCCTGCGACTATGTCTGTATC
CTTCCACCCATGTGCGACCAGGCCTGCATTATGCTACTTCACGTGCTACT
TCACAAACACAAATGCGCTGTCGCTCCTACCCCTAACCCTCCCTCTCGCG
CTTTCTCTCTCGCAGCCCGGCAAGACGCGAGACTTCTACCACACATGCTA
CAACCTGAGCGGACTCTCTGTCACACAGCACTGCCTGACAGGTCCGACAA
TGGCGTTTGTATTGTTTCATCACTTGGATTTATCGGTTCTCAAGGCCACA
TCATGGCTTTACTGATACGACAACGGGCCCCACAAAATGTATTCATGCCA
CAAACATACTTGCGGTCTGAAGTACACTTTGGCGATGTTGTTTAGAAGTG
ATCGGCAATGTGCACTGCGACACTTTCAAGGTGTTCACAAAGGCACATGC
AGATTCTAGTTTCATGCTCGCAAGTGTCGACATGTGCTGGTTGATCGTGC
TCACATATCCATGCTCTGGTGCATGTGGTAACCTTCCTGTGCTCTGCTCA
CTTCCGCGTGAGGGACGGAAACCCCGTGACAGTTGCAAGATATGCAGGTT
ATATGTGCTTTTGTCAAGCATGTGCTCACAGCGCAATGGTGATTGCCGCG
AAAAGCAGGTGCTACCTACGCTTACCAACCGCCATGTGTCACGCTTCTGT
GCTGCCATGTGTCACCCACACTCACTGACCGCCATGTGTCACGTTCCTGT
GCCGCCATGTGTTCACCCTCCAGAGACGCCCAGCGTTCTCGGCGATAGCG
CCAACGAGCTGCTGCCGACTAACCCGCTCTACAACATTACGGAGGTCAAG
GCTGCAATGGCCATGGCGCACTTTGCGAAACTGCCGTGCGAGCACGATGC
CCTCATGCAGCAGCAGCAGCAGCGGCAATAA

Coding sequence (CDS) from alignment at Contig_11:182874..188454+

>mRNA_4709 ID=mRNA_4709|Name=jgi.p|Trimin1|159934|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1578bp|location=Sequence derived from alignment at Contig_11:182874..188454+ (Tribonema minus UTEX_B_3156 )
ATGGAGGAGTACTACAAGCGACTGGAGGTGCAGACAGATGGCTGCCCCAC
CCGCACCACAGTGGATCAAGCGGAGTGCGAGCGCACCTGCACCGTGAGCA
TGCTACCACTGCACATGGACGATCTCTCGGATCAGGAGGTGCTGGAATTC
CAGAACAGGGGCATTCTGAACGAGTCCGGCGACATCGTGCTCATGAGAGC
CAAGCACATTGCCTATCTGCGCAAAGGGCTGAAGGTGCTGCCAGCGGGCT
TTGTCGCACTCGACGCCAGCCGACCCTGGATCATCTACTGGATCACCCAC
TCCCTGGATCTGCTCAATGCCCTGCGCTCAGATGATGACGCAGCCATCAT
AGCCACACTGGCCAGCTGCCAGCAGCCCACGGGAGGGTTCGGCGGGGGCC
CCCAGCAACTGGCGCACTGCGCTCCCACCTACGCAGCGGTGCTGACGCTG
CTGCTGCTGGGCACAGAGGCTGCCTACAGCGCCGTGGATCGTTCCGCGCT
GTACCGCTTCTTCACGTCCATCAAGCACCCCAGCGGGGGCTTCAGGATGC
ACGAGGACGGCGAGGTGGATGTTCGGGGCACCTATACGGTGATCTCCATT
GCAGCACTGCTCAACATCCTGACCCCAGAGCTGGTGCAGGGGGTGGCGGA
GTATGTGCTGGCGGCGCAGACGTACGAGGGGGGGTTCGGGGGGGAGCCGG
GGAACGAGGCGCACGGGGGCTACGCGTTTTGCGCTTTTGCCACGCTGGGT
ATACTCGGGCGCGCGAGCGACGCCCGGCTGGACTCCCTGGAGTGGTGGCT
GTGCCACCGCCAGATGCGCCTGGAAGGGGGTTTTCAGGGGCGCACCAACA
AGCTTGTCGATGGCTGCTACTCATTCTGGCAGGGGGGCACGCTGGCGCTG
CTGGAGTACGTGCGCAGGGGGCGCATTGGGGAGGTGACGCTGCTCAGGGG
GGGGAAAGAGGGGGGGGCGATTAGGCCAGAGCACGGCGAAAGTCCAGAGC
CAGGTAATTTTGAGCTGTTGAAGTACCATGATAACATTATGCTGGAGGGG
GGAAAAGAAGGTGGGGCGATTAGGCCGGAGCACGGCGAAAGTCCAGAGCC
AGGTAACGTCATACTTCCTGAAGTCCCATGTATGCTTGGGGAGGTAAAGT
TAGGAGCAGATGGGAGCAGACGGTGTTACTACGTTCATGCACATGGTCAA
ATGGGGGCCGATGGCGTGACCACGTTCATGCACATGGTGTCGCCAGCGGG
CGTGCACAGCGGCGCGCTTGCCTACAATCAGCGCGACCTGCAGCGCTACG
TACTGCTCTGTGCGCAGCAGCCGGAGGGCGGGCTGCGAGACAAGCCCGGC
AAGACGCGAGACTTCTACCACACATGCTACAACCTGAGCGGACTCTCTGT
CACACAGCACTGCCTGACAGAGACGCCCAGCGTTCTCGGCGATAGCGCCA
ACGAGCTGCTGCCGACTAACCCGCTCTACAACATTACGGAGGTCAAGGCT
GCAATGGCCATGGCGCACTTTGCGAAACTGCCGTGCGAGCACGATGCCCT
CATGCAGCAGCAGCAGCAGCGGCAATAA