mRNA_4699 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347342
Unique Name	mRNA_4699
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347342 vs. uniprot
Match: A0A835ZDS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS1_9STRA)

HSP 1 Score: 1170 bits (3026), Expect = 0.000e+0
Identity = 787/787 (100.00%), Postives = 787/787 (100.00%), Query Frame = 1

Query:    1 MADVDDLNDETFGEGDGGELPAFFAAGGGGDLEFAALMDDLKASALQQLGEEDGDVILAGSDGDAGALQQQDTDGDWAQMQKQFELMSRDFLQYQNQSDARGGGISSGGAGSDPLGSIDQQTGAIAFGMMQQLGMDEGGSPRRHTSXXXXXXXAAMSLDDIEARFSRQGQYAQXXXXXXXXXXXXXXXXXTHSAPMGVPGQGAGGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGLXXXXMRGGLPGPPPMGGQPMVMGPMGVPMGVGMGPQGGMGGMVPLHQLPLHVQHALQMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAANATAQHAPPSGPRPFAPQADARLYPRGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSLLIQRSAVPLVQAGGGGCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLGHTSKSVASHPRALLNLGVNLEEKGDQGQLFGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEATQAGPQQ 2361
            MADVDDLNDETFGEGDGGELPAFFAAGGGGDLEFAALMDDLKASALQQLGEEDGDVILAGSDGDAGALQQQDTDGDWAQMQKQFELMSRDFLQYQNQSDARGGGISSGGAGSDPLGSIDQQTGAIAFGMMQQLGMDEGGSPRRHTSXXXXXXXAAMSLDDIEARFSRQGQYAQXXXXXXXXXXXXXXXXXTHSAPMGVPGQGAGGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGLXXXXMRGGLPGPPPMGGQPMVMGPMGVPMGVGMGPQGGMGGMVPLHQLPLHVQHALQMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAANATAQHAPPSGPRPFAPQADARLYPRGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSLLIQRSAVPLVQAGGGGCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLGHTSKSVASHPRALLNLGVNLEEKGDQGQLFGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEATQAGPQQ
Sbjct:    1 MADVDDLNDETFGEGDGGELPAFFAAGGGGDLEFAALMDDLKASALQQLGEEDGDVILAGSDGDAGALQQQDTDGDWAQMQKQFELMSRDFLQYQNQSDARGGGISSGGAGSDPLGSIDQQTGAIAFGMMQQLGMDEGGSPRRHTSXXXXXXXAAMSLDDIEARFSRQGQYAQXXXXXXXXXXXXXXXXXTHSAPMGVPGQGAGGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGLXXXXMRGGLPGPPPMGGQPMVMGPMGVPMGVGMGPQGGMGGMVPLHQLPLHVQHALQMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAANATAQHAPPSGPRPFAPQADARLYPRGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSLLIQRSAVPLVQAGGGGCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLGHTSKSVASHPRALLNLGVNLEEKGDQGQLFGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEATQAGPQQ 787

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BLAST of jgi.p|Trimin1|347342 vs. uniprot
Match: A0A6H5KT64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT64_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 6.460e-63
Identity = 177/452 (39.16%), Postives = 233/452 (51.55%), Query Frame = 1

Query: 1024 PPSGPRPFA--PQADARLYPRGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSLLIQRSAVPLVQAGGGGCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLGHTSKSVASHPRALLNLG-----VNLEEKGD----QGQLFGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPP--PLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEA 2340
            PP   +P A  P     ++PRGELM+ YD R+V  A +RALDT DP+N+DFY+HN++R                                        R     ++ GG G     +    P+ LPVWQETKE++KKV +++   +K R ++WES NRVLGH ++S    PRALL L          E G+    +G  F T LWRAR  +Q AT A+L   EL + + LP  P EKRA V   L      L  SLGLQ RS    +A                +   A DA T  LE +LDLR+L+T+LEL KGQ++ +R L +L P +R A+VP+VLALTLAR P                     A    L    Q P   PL IL+RC+ELVM AHRGRG+L  AL   +RAE + AVL++G + S A  AEA  +W+ LQA+F+A A
Sbjct:  618 PPGQGKPDARPPLPPIGIFPRGELMTAYDTRYVIMAQMRALDTPDPFNDDFYYHNVMR----------------------------------------RKQEKSLREGGMGQEPNAAAPPMPMPLPVWQETKEIAKKVKEDEADAVKKRIRQWESANRVLGHQARSDVHRPRALLALSEVGGEATPAEAGEVLVSEGAPFETHLWRARLAIQRATNAMLAAFELNYLLHLPTTPPEKRAEVAGRLGDVIVDLAVSLGLQ-RSTILQQA----------------EGKPAPDAST--LEASLDLRVLSTVLELTKGQKLLSRCLAMLSPSQRSALVPSVLALTLARAPAASLRNAPSEQVKADAIRAEEALASELKSILQSPASLPLPILRRCIELVMTAHRGRGTLAGALGSVSRAEVLGAVLQKGGELSEAEGAEAAADWAALQAEFIAMA 1010

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BLAST of jgi.p|Trimin1|347342 vs. uniprot
Match: D8LNC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC6_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 8.430e-48
Identity = 145/350 (41.43%), Postives = 188/350 (53.71%), Query Frame = 1

Query: 1336 AGGG--GCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLGHTSKSVASHPRALLNLG-------VNLEEKGD----QGQLFGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPP--PLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEA 2340
            AGG   G R   +    P+ LPVWQETKE++KKV +++   +K R ++WES NRVLGH ++S    PRALL L            E G+    +G  F T LWRAR  +Q AT A+L   EL + + L   P EKRA V   L      L  SLGLQ RS    +A                +   A DA T  LE +LDLR+L+T+LEL KGQ++ +R L +L P +R A+VP+VLALTLAR P                     A    L    Q P   PL IL+RC+ELVM AHRGRG+L  AL   +RAE + AVL++G + S A   EA  +W+ LQ +F+A A
Sbjct:  465 AGGADDGIRHQAAAPPMPMPLPVWQETKEIAKKVKEDEADAVKKRIRQWESANRVLGHQARSDVHRPRALLALSGGEAGGEATPAEGGEVLVSEGAPFETHLWRARLAIQRATNAMLAAFELNYLLHLATTPPEKRAEVAGRLGDVIVDLAVSLGLQ-RSTILQQA----------------EGKPAPDAST--LEASLDLRVLSTVLELTKGQKLLSRCLAMLPPSQRSALVPSVLALTLARAPAASLRNAPSEQVKADAIRAEEALASELKNILQSPASLPLPILRRCIELVMTAHRGRGTLAGALGSVSRAEVLGAVLQKGGELSEAEGGEAAADWAALQTEFIAMA 795

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BLAST of jgi.p|Trimin1|347342 vs. uniprot
Match: A0A7S2WF85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF85_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.730e-13
Identity = 114/418 (27.27%), Postives = 164/418 (39.23%), Query Frame = 1

Query: 1078 RGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSLLIQRSAVPLVQAGG--GGCRALPSVTLPPLALPVWQETKELSKKVAKEQEANLK--VRTKEWESVNRVLGHTSKSVASHPRALL--------NLGVNLEEKGDQGQL-FGTPLWRARGCVQTATAALLKVEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASAAVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVATRALLLLRPEERWAIVPAVLALTLARMPQGXXXXXXXXXXXXXXXXXXXACLRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAE 2292
            RG +MS  DV FV    LRAL   DPYNEDFYFHNL                                      L  Q  A    + GG  GG  ++P        LPVW+ETK+  K VA++QE   K   RTKEW + N+ LG  +KS     ++LL        +   N    G   Q  F +  W+AR  ++ A  ALL ++E +  +R      E+   + + L +    L  +LG                  F + N  + + TA + A+ +  +G    +L+A ++ L   Q  A   + L     +  + P +LA  +    +                        G +  A       I K  +E VMA H    SL  +L+ R RAE M  VL+ G QA+    AE
Sbjct:  354 RGAMMSARDVSFVLHVHLRALQISDPYNEDFYFHNL-------------------------------------PLRRQARAEAGAREGGNGGGLSSIP--------LPVWEETKQ--KAVAEKQELRDKFSARTKEWATTNQTLGQVAKSDPHRQKSLLAGLDLVSASQSANAGGDGTDSQAPFSSRGWKARRAIEEARGALLDIDEQRRLLRRNDRTPEQLERIQSVLGSQFLVLQQALG------------------FGEGNFESIEDTATLAAIVALPKGR---KLVARVVRLVPSQAPALLPVSLRTMFSQLPVRPDMLAAAVDAEQRQALLQLQESEDQLLSAFQEVIVQSGALSYA-------IAKATVENVMAPHIRNASLNASLSIRPRAEIMSHVLKLGTQAAGEEDAE 696

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347342 vs. uniprot

BLAST of jgi.p|Trimin1|347342 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835ZDS1_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KT64_9PHAE	6.460e-63	39.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNC6_ECTSI	8.430e-48	41.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2WF85_9STRA	4.730e-13	27.27	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_11	contig	Contig_11:25919..37610 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347342\|estExt_Genemark1.C_Ctg_110003
Max annot lvl	2759\|Eukaryota
EggNOG OGs	29QII@1\|root,2RX8Q@2759\|Eukaryota
Evalue	5.23e-49
Seed ortholog	2880.D8LNC6
Hectar predicted targeting category	other localisation
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-04_004360.1
TranscriptId	347664
Track	FilteredModels1
ProteinId	347342

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347342	gene_4699	Tribonema minus UTEX_B_3156	gene	Contig_11 25919..37610 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4699_13	exon_4699_13	Tribonema minus UTEX_B_3156	exon	Contig_11 25919..26605 -
exon_4699_12	exon_4699_12	Tribonema minus UTEX_B_3156	exon	Contig_11 27838..28263 -
exon_4699_11	exon_4699_11	Tribonema minus UTEX_B_3156	exon	Contig_11 29511..29622 -
exon_4699_10	exon_4699_10	Tribonema minus UTEX_B_3156	exon	Contig_11 30766..30953 -
exon_4699_9	exon_4699_9	Tribonema minus UTEX_B_3156	exon	Contig_11 32558..32616 -
exon_4699_8	exon_4699_8	Tribonema minus UTEX_B_3156	exon	Contig_11 33715..33785 -
exon_4699_7	exon_4699_7	Tribonema minus UTEX_B_3156	exon	Contig_11 33978..34011 -
exon_4699_6	exon_4699_6	Tribonema minus UTEX_B_3156	exon	Contig_11 34124..34433 -
exon_4699_5	exon_4699_5	Tribonema minus UTEX_B_3156	exon	Contig_11 35165..35667 -
exon_4699_4	exon_4699_4	Tribonema minus UTEX_B_3156	exon	Contig_11 35706..35901 -
exon_4699_3	exon_4699_3	Tribonema minus UTEX_B_3156	exon	Contig_11 36992..37045 -
exon_4699_2	exon_4699_2	Tribonema minus UTEX_B_3156	exon	Contig_11 37196..37380 -
exon_4699_1	exon_4699_1	Tribonema minus UTEX_B_3156	exon	Contig_11 37595..37610 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4699	UTR3_4699	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_11 25919..26395 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4699	CDS_4699	Tribonema minus UTEX_B_3156	CDS	Contig_11 37595..37610 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347342	Trimin1\|347342\|estExt_Genemark1.C_Ctg_110003	Tribonema minus UTEX_B_3156	polypeptide	Contig_11 26396..37610 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_11:25919..37610-
coding sequence from alignment at Contig_11:25919..37610-

spliced messenger RNA

>mRNA_4699 ID=mRNA_4699|Name=jgi.p|Trimin1|347342|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2841bp|location=Sequence derived from alignment at Contig_11:25919..37610- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGATGTTGACGATCTCAACGATGAGACCTTCGGTGAGGGCGACGG
GGGCGAACTGCCAGCCTTCTTCGCTGCTGGCGGTGGTGGGGACCTGGAGT
TTGCTGCCTTAATGGATGACCTGAAGGCTAGCGCCTTGCAGCAATTGGGG
GAGGAGGATGGCGACGTCATCCTCGCAGGCAGCGATGGCGATGCTGGGGC
GCTGCAGCAGCAGGACACGGATGGCGACTGGGCGCAAATGCAGAAGCAGT
TTGAGCTCATGAGCCGCGACTTCCTGCAGTACCAGAACCAGAGTGACGCG
CGCGGCGGCGGCATCAGCAGCGGCGGCGCCGGCTCGGACCCCCTGGGCTC
CATCGATCAGCAGACTGGCGCCATCGCCTTTGGCATGATGCAGCAGCTGG
GCATGGATGAAGGGGGCTCCCCCAGGCGGCACACGTCGCCCCCCCCCCCC
GCGCCCCCCGCGGCCATGTCTCTCGACGACATCGAGGCACGCTTTTCGCG
GCAAGGGCAATACGCGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCAC
CTCCCCCCCCTCCGCCCCCCACGCACTCTGCCCCCATGGGGGTACCCGGT
CAGGGGGCGGGTGGGCCCCAGATGGGACCCCCTGGGTTTCCCCCTCATGG
GATGATGGGGGGTCCGCAGGGGTCCATGCCCATGCAGATGATGGGGGGGG
GTCCGGGGGATCCACGGGGGCTGCAAATGGGGGGCATGCGGGGGGGGTTG
CCGGGACCCCCCCCCATGGGGGGCCAGCCGATGGTGATGGGGCCCATGGG
GGTGCCTATGGGGGTAGGTATGGGGCCGCAGGGGGGTATGGGGGGTATGG
TGCCGCTGCACCAGCTGCCGCTGCACGTGCAGCACGCGCTGCAGATGCAG
CACCACCACGAGCAGCAGCAGCGCAGGATACAGCAGCTGCAGGCGCAACT
GCAGACGCAGACGCAGAAGGCGCCGCCGCCGCCGCGCGGAAAGGCTGCCG
CCAACGCCACTGCGCAGCACGCGCCGCCGAGTGGCCCTCGGCCCTTCGCG
CCGCAGGCCGACGCGCGCCTGTACCCGCGCGGCGAGCTCATGAGCGGCTA
CGACGTGCGCTTCGTGACGACGGCGCTGCTGCGCGCGCTCGACACGCAGG
ACCCCTACAACGAGGACTTCTACTTCCACAACCTCGTGCGGCGGCGCGAG
GAGCGGCGGCGCCGCGCCGCGCTGCTGGCGCAGGCCGGCGGCGGCGGCGG
AGCGCTGCCTACAGGCCGGCGGCGGCGGCGGCGGAGCGCTGCCTTCAGTT
TGCTCATCCAACGCTCAGCAGTGCCGCTGGTGCAGGCCGGCGGCGGCGGC
TGCAGAGCGCTGCCTTCAGTGACTCTCCCACCGCTGGCACTGCCCGTGTG
GCAGGAGACCAAAGAGCTCTCCAAGAAGGTTGCCAAAGAGCAGGAGGCTA
ACCTCAAAGTGCGCACCAAGGAGTGGGAGAGCGTCAATAGGGTGCTGGGA
CACACATCAAAGTCAGTGGCCAGCCATCCCAGGGCGCTGCTGAATCTGGG
TGTAAACCTGGAAGAGAAGGGCGACCAAGGGCAGCTGTTTGGGACGCCGC
TGTGGCGAGCTAGAGGGTGTGTTCAGACGGCCACAGCTGCGTTGCTGAAG
GTGGAGGAGCTCCAGCATTTCATCAGGCTGCCGGCGCTGCCCAATGAGAA
GAGGGCTTCTGTCATGGCTGAACTACAGACGACAGCCAGCAGCCTAGGTT
CCAGCCTGGGCCTGCAGCCGCGCTCGGAGGCGGCGATGGAGGCGAGCGCC
GCCGTGCGCGCGGCCTTCCAAGATCCCAACGCGTCAGCGGCTCAGCGCAC
CGCCGCGGTGGACGCGGTGACCTCCGCGCTGGAGGGGACCCTGGACCTGC
GGCTGTTGGCGACCCTGCTGGAGCTGGCCAAGGGGCAGCGCGTTGCGACG
CGCGCGCTGCTGCTGCTGCGCCCGGAGGAGCGGTGGGCGATTGTGCCGGC
GGTGCTGGCGCTGACGCTGGCGCGCATGCCGCAGGGGGGGGGGGCGGCGG
GGGGGGGAGGGGGGGGGGGCGGGGGGGAGGAGGCGGCGCTGATGGCGTGC
TTGAGGGGGCTCGTGCAGAGCGCGCAGCCGCCGCCGCCGCTGTCCATACT
CAAGCGCTGTCTGGAACTCGTAATGGCTGCGCACCGGGGCCGCGGAAGCC
TCAAGCCCGCACTCGCCGACCGCGCGCGCGCTGAAGCCATGCACGCAGTG
CTCAGGCGCGGCGCACAGGCCAGCGTCGCCACGAGCGCAGAGGCGGTGGA
GGAGTGGAGCAGGCTGCAGGCGGACTTCCTGGCGGAGGCCACGCAGGCGG
GGCCGCAGCAGTAGCTGCGGCGGCAGCGGCGGTGGCAGCAGTGGCGGCAG
CGGCAGCGGCGGCTGCGGCGGCAGCAGCAGTAGTAGCAGCGGCAGCGGCG
GCAGCGGTGGCAGCGGCAGCAGGCGAACCAGGGGGAGCTGCCGTTGCAGC
ACCGGCAGCGGTTGCCACAGCTGCTTGTGCTCATTACACAGCGTGCGCAG
GCGAAGTTACCAGCGGACGCCATGCAGTGGGCGCCGCCGCAGCAGCAGCA
GCGGCGGCGGCAGCAGCAGTAGCAGCAGCATGCATGCTGCAAAGCAGGGG
GGGCTGCCGTTGCGCATTGGCAGCGGCGGCCGCTACAGCAGTCCATGCGG
AGTACGCAATGCGCAGAGTCTGTGCCCATGGCGCGTTGGAGAGTAACCGC
ACAGCTTGCGCTGGAATGGATCGTGGTCCTGCGATCACACTGCACAAGTG
TGTGGCATGTTACACGCACAACAGCATCAGTCTTGAAAACG

protein sequence of jgi.p|Trimin1|347342

>Trimin1|347342|estExt_Genemark1.C_Ctg_110003 ID=Trimin1|347342|estExt_Genemark1.C_Ctg_110003|Name=jgi.p|Trimin1|347342|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=788bp
MADVDDLNDETFGEGDGGELPAFFAAGGGGDLEFAALMDDLKASALQQLG
EEDGDVILAGSDGDAGALQQQDTDGDWAQMQKQFELMSRDFLQYQNQSDA
RGGGISSGGAGSDPLGSIDQQTGAIAFGMMQQLGMDEGGSPRRHTSPPPP
APPAAMSLDDIEARFSRQGQYAQQQQQPPPPPPPPPPPPPTHSAPMGVPG
QGAGGPQMGPPGFPPHGMMGGPQGSMPMQMMGGGPGDPRGLQMGGMRGGL
PGPPPMGGQPMVMGPMGVPMGVGMGPQGGMGGMVPLHQLPLHVQHALQMQ
HHHEQQQRRIQQLQAQLQTQTQKAPPPPRGKAAANATAQHAPPSGPRPFA
PQADARLYPRGELMSGYDVRFVTTALLRALDTQDPYNEDFYFHNLVRRRE
ERRRRAALLAQAGGGGGALPTGRRRRRRSAAFSLLIQRSAVPLVQAGGGG
CRALPSVTLPPLALPVWQETKELSKKVAKEQEANLKVRTKEWESVNRVLG
HTSKSVASHPRALLNLGVNLEEKGDQGQLFGTPLWRARGCVQTATAALLK
VEELQHFIRLPALPNEKRASVMAELQTTASSLGSSLGLQPRSEAAMEASA
AVRAAFQDPNASAAQRTAAVDAVTSALEGTLDLRLLATLLELAKGQRVAT
RALLLLRPEERWAIVPAVLALTLARMPQGGGAAGGGGGGGGGEEAALMAC
LRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAV
LRRGAQASVATSAEAVEEWSRLQADFLAEATQAGPQQ*

mRNA from alignment at Contig_11:25919..37610-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4699 ID=mRNA_4699|Name=jgi.p|Trimin1|347342|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11692bp|location=Sequence derived from alignment at Contig_11:25919..37610- (Tribonema minus UTEX_B_3156 )
ATGGCAGATGTTGACGGTGAGCCACCTTGCACAGGTATCGCATGTATTGT
ACACTCCATTGACTGTTTTGTTGGAAGTTGCGCTGTCCAGAGCACAAGTG
TCTTTTTTCAATTGAGAGCTGAGGTTGAGCTGTGCGCGAAGCCTTGTATA
ACAATGGCGCTAATATTGCCCCTTTTGGTGCTTTCCGGCTGGCAACTTGT
CACCCCAATCCCTGCAATATTCCAATCAAGATCTCAACGATGAGACCTTC
GGTGAGGGCGACGGGGGCGAACTGCCAGCCTTCTTCGCTGCTGGCGGTGG
TGGGGACCTGGAGTTTGCTGCCTTAATGGATGACCTGAAGGCTAGCGCCT
TGCAGCAATTGGGGGAGGAGGATGGCGACGTCATCCTCGCAGGCAGCGAT
GGCGATGCTGGGGCGGTTGGAGTGCAGAGCTTGCTGGCGAGTTTGAGGTT
GGACTTGGGATTGCAACCACAGGATCAGCAGCAGCAGCAACAGCAACGGC
AGGGCGGCTTGTTGTCATACCAACTGGAGACTGCTGCACAGGCGCAGCCG
CCGCCGCCGCCGCAGCTGCAGCAGCAGGACACGGATGGCGACTGGGCGCA
AATGCAGAAGCAGTTTGAGGTACAGCTCATCAACACACTCCACATGGCAA
TTGAATACAAGATGTGCTTTTCAGACCATGCCGGATTTGCTGAAGTTAAT
TAGACACGACGTCACGACCAGCTGAGTCAACCATCCCTAGTACAGCTCAA
ACCCGTCAGCAGAAATGTTCAAGATCATTGCATCCTTCGTGTTTTAGCCC
ACGTGCCTACTGGGTACATGCAATCCACAATCAATATTTGTGCGTGTGGG
TTATGGAGCAGTGGCCTATGGACTAGGCAACAACTCGATTCTAATCATCG
TACATGCCGTTTCATTGTTATCCTGATGCTTCGACGCTGTAGCTGCCACG
ACTGCTGCCGGCATCCTGGGAGGAGGCACAGAATGCTCCAGCCGCTGCTT
GTCATGATATGTGCCAGTCGCCTGAGCTTGTACAAGCCAATGGTAGCTAG
CGTGCAAGTCGCAACCGTGGCTGTCCTCGTCCATTCTGAGCATCATCACA
TGTAGGCTGAGCATCATAATAGCATGAACGGAGGCCAGCAGCAGCAGCAA
CGATGCGCGCTGCTCGGATTCGCTGGCCAATGGAGCAATACGTGTACATG
TCAGCACTTGAAACTTTCAAGCTGTAAGCATTTGTTGTTTCACGCGTAAT
GATGCTCTGGTCAAGGCACCGTTCTCGCTTGCAATACTCCGAATTAGTAC
TTGTGTCTTGGTGTTTTGCTGAGTCGTTAAGTGTTTGGCAGACCGTGCAT
TGCTGCGCCGCCATTGCACAACAACCAGTGCACGTGATGATGTGCACTAC
AGCAGCAATGCTGAGTGACGCTCGCGGATTTTAACTGCAACTTCACAAGG
CATGCGCAGCCCGTGCACATACAGTGCAGGCAGACATGCTAACGTGTTGC
CACAGGCCCACGCTCTATGTGCAACTCGTGTCAGTACAATTCTCAACGCC
AATCACTGCCTGATCGCGCTGCATTATCTGTGAGTCTCAACACTTCAACG
CCACTGACCTTCTTGGTCAAGCTGCTTCGCTACATGTCTCAACATGCGAC
CCTTGCTGCGTCTTCGCCACCCTAACCTAACTCTTCTTTACGTGCGCGCA
CACACGCAGCTCATGAGCCGCGACTTCCTGCAGTACCAGAACCAGAGTGA
CGCGCGCGGCGGCGGCATCAGCAGCGGCGGCGCCGGCTCGGACCCCCTGG
GCTCCATCGATCAGCAGACTGGCGCCATCGCCTTTGGCATGATGCAGCAG
CTGGGCATGGATGAAGGGGGCTCCCCCAGGCGGCACACGTCGCCCCCCCC
CCCCGGTTTCCCCCCGCTCCCCCCGCCCCCCCCCCCCCTTCAGCGCCCCC
CGCGGCCATGTCTCTCGACGACATCGAGGCACGCTTTTCGCGGCAAGGGC
AATACGCGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCACCTCCCCCC
CCTCCGCCCCCCACGCACTCTGCCCCCATGGGGGTACCCGGTCAGGGGGC
GGGTGGGCCCCAGATGGGACCCCCTGGGTTTCCCCCTCATGGGATGATGG
GGGGTCCGCAGGGGTCCATGCCCATGCAGATGATGGGGGGGGGTCCGGGG
GATCCACGGGGGCTGCAAATGGGGGGCATGCGGGGGGGGTTGCCGGGACC
CCCCCCCATGGGGGGCCAGCCGATGGTGATGGGGCCCATGGGGGTGCCTA
TGGGGGTAGGTATGGGGCCGCAGGGGGGTATGGGGGGTATGGTGCCGCTG
CACCAGCTGCCGCTGCACGTGCAGCACGCGCTGCAGATGCAGCACCACCA
CGAGCAGCAGCAGCGCAGGATACAGCAGCTGCAGGCGCAACTGCAGGTGA
AGTTGACGTTGTAGTTGAAGTGTAGTCAGGTTCATTGAGGTCATGTTTGT
TGCTTTTACATAGAACCTATTCATGTAGAATCGTTGCAGCAAGCCAGCAG
CGTCAAATGCATGCTGCTAATGCCTGTGCAGGTGCAGCAGCGGGACAGCT
GTGGCCAGCATGTCTTATCAATGCTTAGCAGGCGGCATAGTGCTGCCCCT
GAGTTCAGCAAGTCACAAGAAGGTGCTGCTGTCAGATTCGGAGGCAGTGC
CACATGCGATAGCATGGCCATCCTCATGTTGCTCCGCTCTGGTATGTAAG
TCCGTGACTTGTACACTTCAAGTGTCATTGGGAAACACCGACGCAGTCGG
CCGCAGATTCAACCTGTGACACGACATTCGCGCGCCTGACCTCCCCTCGT
GCGCCCTGCGCACTTTGCTGCTGCTGCCTCTTGCCGCAGAAGCAGACGCA
GAACGCACTGCCGCCTCCCAGGAGCAACACGCCTGAATATTGACACAATG
CACGGCTCCCACTGCAGCGCGCGCCTGACCTCCTCTCTTTCCGCCCTCTG
CACATTGCCGCCGCCGCCTCCGCCACCGCTGCCGCCCCTTGCCGCAGACC
CAGACGCAGAAGGCACCGGGAAACACGCCCGAACGGGAAGCACGCCTGAA
TATTGACACGATCCACAACTCTCACTGCGGCGCATGCCTGACTTCCTCTC
GTACTGTCGCCGCTGCCGTTGCCGCAGACGCAGACGCAGAAGGCGCCGCC
GCCGCCGCGCGGAAAGGCTGCCGCCAACGCCACTGCGCAGCACGCGCCGC
CGAGTGGCCCTCGGCCCTTCGCGCCGCAGGCCGACGCGCGCCTGTACCCG
CGCGGCGAGCTCATGAGCGGCTACGACGTGCGCTTCGTGACGACGGCGCT
GCTGCGCGCGCTCGACACGCAGGACCCCTACAACGAGGACTTCTACTTCC
ACAACCTCGTGCGGCGGCGCGAGGAGCGGCGGCGCCGCGCCGCGCTGCTG
GCGCAGGCCGGCGGCGGCGGCGGAGCGCTGCCTACAGGTATGTATTTAGG
TATATACTTTAGAATATAAGTAGGCATGTATGGACTTGAGAGATGTGTGT
GGTGCGGCGGCGCGAGGAGCGGCGGCGGCGCTCCGCGCTGCTGGCGCAGG
CCGGCGGCGGCGGCGGCGGAGCGCTGCCTTCAGGTATGCATTTGGGTACA
TACTTCAGAATATAAGTACTTCTATTAGGTGTAGATGTGTTTTGCGGCTG
CCAGTGTGCTCACGTGGCGGCGGCGGCGGCAGCGGCGGAGCGCTGCCTCC
AAGTGTGTATAGGTATACTCACTCTTCTCGGAGTAGGTATGTATGGACTT
GAGAGATGTTTGTTGCGGCTGGCAGTTTGCTCATCCAACGCTCAGCAGTG
CCGCTGGTGCAGGCCGGCGGCGGCGGCTGCAGAGCGCTGCCTTCAGGTGC
GTACGTAGGTGTGCATGTACCTGAGTGTGCATGACTGACGGCGTGTTCAT
TCAGCGGGCAGCGGCAGCACGCAGCCTTCACAGGTGTGCTTGTGTGCGTT
GCTGGTGTAGGCTGGCGTTGAAGCGCTGCGTCCAAGTTCATGTGTAGGTG
TGCATGCACTTGATAGAAGTGCTTGGACACAAAAAAGCCCAGATCATTGT
CACAATGCCCCTGGACCTCAAAAGCTCACAGAGTACTCAGGCAAGTGCTT
GAGGAGTGCACGAGTTGAGGTCGTTGATGTGCTCACTGGACAGGCTGCCT
TTATACAGGGGTATGTATGCATGTCCCCAAGTTACATATTTTGTGGGGTG
TGATGCTCGGTGTGCTCACTTGATAAGCAGGACATCTGTCACAACAAGGC
TGCTTTCACATTTTCTTACTCACGTTGCCGGCAGAGAGAAAGCGGCATTT
GGGATGCTGGCAACAGAAAGAGACCGCGGCAGCAGCCCTTGGCGCTGCTG
CCTCCAGCCACATGTTACGCGTGCATGTACACTTTCTGTCGTCGTGTCAA
ATTCTCTACAGTGCGTATTTGCAAGTGATCACAGCATCTTACGCGGTACA
TCATGACGTAATAGAGGCATATCAATAACATAGGAGCATAACACAATACG
TGCATGCCCGATTTCTGTTATGTAGGGCCTGCGCCGTGCTTAGTTGAGAA
TGATCACAACATCTTGGGAGGCGCAACATAATGTACAGAGTATATTAACA
CAATAGCAGCAAGTCATCATCAATCAAACACATGATCACAATGAGCGCAA
GCCATAAGCACCCCTTGCCTTTCACATGCCATCGGCACATTGCTGACGAC
CAAGCTCACTTTGTACATGCACCCATGTTGCTGTGTTGCCCGTCTGTCTC
TCCGCTCAAGGCGAATGGGCTCCACAAATACTCCTACTTCGTACAACACA
TAGTCACACTACATGTGCGCTAGCTATTAAGCACTGCTTGCTACCACAAG
CCATTGGCGCACTGCCGCCGATCAAGCTCATTTTCTTATGCACCCATTTT
GCTGCTGCCCGCTCAAGGCGAATGGGCACCGGAACCGCCTCCAGTGACTC
TCCCACCGCTGGCACTGCCCGTGTGGCAGGAGACCAAAGAGCTCTCCAAG
AAGGTATGTAACTTTTTGGCAAGGGTATGGTAGTCAGTTCACATGTTTGT
CTCTTTTGAATACTTCAACAGTCACTCGAATCTGCAGGCGAGAACCCTTT
GGCGCTTGGGGCGGGGGGCACATACATGCACGTCACATTTGTTGAAGTAA
ACCGCGCTACGGCACGTCACAATTCTTGAAGTATGCCGCGTTGTGGCACG
TCAGATTTCTTGAAGAGTACCGCGCCTCGGCATGGGCATGGTGGATTATT
CCTAGTGCAGTTTACAGACGCGCCTGGTTGGTGCTTTATTATAACCACCT
TTTTTTTTTATCAATTCAAGTCTGCTTGTAGACTAGTTTGACGGCGGTGC
AGCAACCCTGTGAAAGCTGATTATTATGTGACGATAGAAGTAAAGGCGCT
TCAAGTGATGTGGAGTCATTTCAAGTGCTTGTTGAGACAGGTAGAGGGCC
CCCAAGGCGCCGTTCCTTCATGTCCAGAGCCGCGAGCGCACAAATCTTTA
GTCTTTCTTGATTCTGGTGTTATTGAGAGGGCAATAAAATAGATTCAGTA
GTTCAGATCTCACCAGGTGAAAGGCATCGCGTAGGTAAAACGCAGGTCAT
TGTGCTGCAGCCTTTGGTTTACAGCGAGGGCTACGATTTAAGAGCGGGTC
CGTCCCGCCAAATCCACCGCTCTTATACCGTGACTGCTCTTATATCGACC
TTGGGCTTAACTAGGGTTAGCCCTAACCCTAGGCTAACCTCAGCCCTATA
CCTAGGGTTTGAAGTATTTAGGTAGTGCCAAACAGTTGAAGTTGGCTACG
AATTAAGCCGGAAAGCAATTGCACCGTGCGCATACGCTGTGACTGATCGA
TATGCGCTTGAGCGTTGTTGAATATCACGCAAAAGCCGCTGTTCAGGCAT
TGTTCGTGAGGCCGCTAGTGGTAGGTGGACACGATATAAGAGCGGTCGGC
CCCGGGCAGCACCAAACCGCTCTTATATCGACCAGATCCGTGTTCAGCCG
TCAGACCGCTCTTATACCGTGACCGCTCTTATATCGAGCGCTCTTAAATC
GTAGCCGTCGCTGTATGTAGGTGTGCAGTGGTAGGTACCTATGAAGGGCG
CAAACAACCATGCGTGTATGTGTGCAACGGTAGGTACCTATAGAGGGAAC
AAAAAACAGCGCGCTCAAGCCGCACATACTAAATACTTTCAGGGCAAGTG
CTTGGACTTTTTACACAGTTGTTGCAGCAGGGCAGCGTCTTGTAAAAAAA
AATATTACGTCGTCGCCCACATGAAGGAGTCAATGGAAAATGTGAGTGTT
GACAATCAATATACTTTCTCTGCAGCGAGTGATTTTTCATGCATGCACGG
CTGTGTCAGCAGTTATAGATGTGAAAAGAAATTGTTATAAAAGGAACCGT
GCGTCTGCTGCAAGTTGCAACTATGATGCCAGCATCCCAAAGACACTGCT
GTGCTTCGAAGTACCACTACTGAAACGCATCTGTACACTGGAATGCTTGT
GTACAGCACTGCAAGTTGTAACCACGCCGCTTGGCAATACTTGATCAACA
ATACAAAATGCTCCGCCTCTGATTTCTGCTATCCTGCTAATCATAATCGA
TATACAGGTTGCCAAAGAGCAGGAGGCTAACCTCAAAGTGCGCACCAAGG
AGTGGGAGAGCGTCAATAGGGTGCTGGGACACACATCAAAGTCAGTGGCC
AGCCATCCCAGGGCGCTGCTGAATCTGGGTGTAAACCTGGAAGAGAAGGG
CGACCAAGGGCAGCTGTTTGGGACGCCGCTGTGGCGAGCTAGAGGGTGAG
CATAGCGGTTTTACTTCAAGTACATGGCGGTGATACTTCAAGTAGTTGTT
CTATTCAGATGCTTGTTTGAGGGTAGCTGTTTGGGACGCCACTGCGGCGA
GCTAGAGGGTGAGCCCGGCGGTGATACTTCAAGTACATGGCGATGATACT
TCAAGTAATTCTTTGAGCATGGCAGTGATACTACAAGTATATGGTGATGA
TACTTCAATAACTGTTTTTTTAACAACATGTTTGAGGGTAGCTCCTTGGG
ACGCCCCTGTTGCGAGCTAGAGGGTGAGCATGGCGGCGGTACTCGCATGT
AACTTCTACAAGGTGTTTGTTTGAGGGCAGCTGGTTGGGACGCCCCTGTG
GCGAGCTAGAGGGTGAGCATGGTGGTGGCACTTGTTTCTACAAACTGCTT
ATTTGAGGGCAGCTGTGTGGGGCGTTCCTGCGCGAGCATGGCAGCTTTTG
TCAATTCTACAAAGCGCTAATTTCAGTGCCGTTGTGTAGCTTGAATTAAT
GCGCCCAGCTCAGGGACTCTGCGTACTATGGCAGGCAGCTTTGCTTTCAC
CAAAACCTCAAGTCATTTTGACTCTAAGCACATGGCGCTCGACACAGCAG
TCACTCTTGAAGTCGCTCTACTAGGATGGTGTTCGGGAGTGTTTGCTTTG
TGCTGCTGCTGTTGTCCTGCAAAAATCGAATTGCATTTGAGTAAGATATT
GGAGAGCGTCTTGACATGGTTCGTGCCATGGTCCACAAGTAAGTCCTTTC
GTCACAAATACCTGCCAATCAGCGTTAAAGTCCGCTCTACCTTGTGGGAC
CCACTTAGGGTTAGGGTCAGGGTTAGGCTGGCTCAACACGTCGTGCCTCC
TGCGACAAGGTATCTTAACATGACGCTTTGAACTACTTGAAAGGGATCGT
TGTTAACATATCATACAAATTATGTAATTGACAGCACACCCTTCAAGCTC
CAAAAAGGACCGTGCAGAGTCTGAAGAGCTGACAAGCGCTTCTTGTTCTA
CAATATATATAACCTCGTGAGTTCCATCGCACCTGTTAATCGCAGCAAGA
CTTTGTCCTTAGTGGAGTGCTTCAACACCATTGACACTTGATTTTAACCT
TTGTACCATTGCACCCTTTGCTGGCTATGTATGCACAGGTGTGTTCAGAC
GGCCACAGCTGCGTTGCTGAAGGTGGAGGAGCTCCAGCATTTCATCAGGC
TGCCGGCGCTGCCCAATGAGAAGAGGGCTTCTGTCATGGCTGAACTACAG
GTCAGTATCGGATCGGCATGGTGGGGAAGTCAACCACTTGAAGTGCAGCA
TTGACTGTTGTACTTGAGCATTTACAATAGCATGCGTTCAACCGCTGCAT
CTGCAGTACTTTTCCTGACTAACAGCACTGCCCAATGAGTCCATGAGGGC
TTGTGTGTCAGCCGACCAAATACAGGTTGGTTCGGCGGACTGACAAGAAT
GGGGAGTTACACACTTGAAGCATCGTTGTTTTGTTAGCATACGCACATAC
TTCACCAGCTGCTCCAAACAGCCCCTGGCTGTAGCGCACTGTCCGCCTAC
TGCGAGTCAACTGCAGAGTACGGCTTCCTATCCGCCAAAACATGAGCTTT
TATTACAGGGCAAGCAAAGAAGGGTCTATAACCAAAGTGCATTTTTTCTT
TGAGTCAGTGTCAACAAGTAATACCCTGATGTGCACTCACATCCTGTCCT
GTTGTAATTTGTAGGTTTGCCGCCCAAGCGTGTTCACTTAGTTCATGTTA
AGCACATCGGTCACTTACTGTTGCCACCAGACGCAGCCAAAGCTGCAGTC
ATCGTCATCGTTGACTTGGCAGGATGGTTTTGTCGGCGTTACACCATACT
GCTCCGCGTTCTCCAGGCAGTGACGGTGCTTGTTTCACTCAAACGAAGTG
GTATTTCTTCGACATGACGTTGCAGAGTATAAACTCGTTGACTTGCAGCA
TGGTTCTCCGTATTGCGCCTGAATGCACTTCTTTCTACAGGCAGTGATGG
TTGGTTCATCTTTCGTTCACAAAAGATGGTATTGCTTTCAGGCATGGCTT
CGTACGTCACATTCTACCTTTCTGAGTGTGCGTGTAGTAGATGATACCAA
ACGTATACCTACCCATCCTCACTGCTCCTTATGCTGGCAGCCTCACTTTC
AGCCTCGTCCTCTGTTGCCACATGACAAGCATACTGGCAGTAGCACAGCA
CAGCACGCTTTCGTCCCAGCACTGGCATTTTCCCGCTTCTCAGGCACTTT
CTTTTGTTACAAACCCACATCAGACTTCCATACATCATTGGGCCTTGCCG
CAGTGAGCCGGAGCCATTTGTCAGCAATCCAGACCCTTGTTGTATAGGAG
GGCCCCTGCCTGATGTTGTCTGCACCTATTTGTCTTCATCCGGCGCCAAA
TTGGCAGTCTTCAATGCTGACACAGGCCCTATTCTCTCTTTGAAAGCCAA
GCTCAGCACTGATGCGGAGTGTACCCCCTTCACCCGCCTTCTCACAGACG
ACAGCCAGCAGCCTAGGTTCCAGCCTGGGCCTGCAGCCGCGCTCGGAGGC
GGCGATGGAGGCGAGCGCCGCCGTGCGCGCGGCCTTCCAAGATCCCAACG
CGTCAGCGGCTCAGCGCACCGCCGCGGTGGACGCGGTGACCTCCGCGCTG
GAGGGGACCCTGGACCTGCGGCTGTTGGCGACCCTGCTGGAGCTGGCCAA
GGGGCAGCGCGTTGCGACGCGCGCGCTGCTGCTGCTGCGCCCGGAGGAGC
GGTGGGCGATTGTGCCGGCGGTGCTGGCGCTGACGCTGGCGCGCATGCCG
CAGGGGGGGGGGGCGGCGGGGGGGGGAGGGGGGGGGGGCGGGGGGGAGGA
GGCGGCGCTGATGGCGTGCTTGAGGGGGCTCGTGCAGAGCGCGCAGCCGC
CGCCGCCGCTGTCCATACTCAAGGTGCGTTGCTTTTGCATGCTGGGATTG
CTTTCTTCAACTTGTGACGTACGCAGCGAGAGGAGGCAAGGCCTTTGCTG
CTGTCGGTACTTAAAGGTAGTGTGTATTTGGGTGTGTGTATGTGTGCGTG
TGCGTGTGTGTGTAGTAGTAGGTTGACAGAGAACGCTGAGGCCCTGCCGT
CGCTGCCAGCCAACGCAGATAGCAGTGTCAAGGTGAAGCGGCTGAACCAC
TTGGACGTATACATTCAAGCGGTATACATATCTAAGTGGTTCAGGCACAT
AACCACATAAACACCCACATCAATCAACACCCAAATCAATTTTTGGCGTT
CGAGTTCCGGAATTACTTGGATGTATACCGAGCCCAGTAATAGCCCGCTT
CACTTCGACAACGCTATCCACGCTGGCTGGCTGGTAGGGTTAGGCTTAGG
GTTAGGGTTAGGGTACGGCAGGGCCTCCTCAGCCTTCACTTCTAACCTCT
TGACCATTGCTGCAGTGGATGAGGCTGAGGTTCCCCGTAAAACTTGAAAG
CAGCTGGCACTTTACTTCAACTTACTTCAACCTCAGAAGTACGCAGGATC
GGGGAGTGCGGGCAAGGCCTGCAACGGGCTTGACCGAACGTACGCATATG
CATGCAATCCGCCAACGTCATCAGGACAAAGTTCGACTGTCGTGCTGTGT
GTACGCTCACCGCCACAATGCCCAAATCATCTGATACCCTTGGCACTGGA
TGCACGTCACATGCCTGGCACAACGTGCTAGCATGGGTGCCTGTGCCCCA
GCGAACAGTTGAAGCGGGGTCGTGCTAGTGTGCGAGCGCCCTCGCGAACA
GTTGAAGCGGGGTCGTGCTAGTGTGCGCGAGCGCCCTTGCGCACAACTGC
ACAGCATGACGGGGCCAGGTCTCCAGCTGCTTCGCTGTCGATGCGCAAGC
TGCATTGTGGTGCACCTGATTACCTACACGAAAGTGTCCAGCCCTGGAAG
CAGGAACTGCGGTGGGCTCTAAGAGGCTGGATGAACGGCACCTTTGCCGG
AGGCCTTGCACCGCGCGCTACGGTCTTTGTCGGTTTGAATGCTCAGGCTG
GGCTGTAACATTGGAGGTCTTGTTGTGAGTTTACTGCTGCTGCTGCTGCT
CATGCGATATCCAGTGCTAGAATCTGATTCAACCGCGCAACGTCTGCTCG
CCCTTCTCCCCCCCTCCCCCCCCCCCCCCCGCCCCTCCCCCCGCCCCGCC
CGCAGCGCTGTCTGGAACTCGTAATGGCTGCGCACCGGGGCCGCGGAAGC
CTCAAGCCCGCACTCGCCGACCGCGCGCGCGCTGAAGCCATGCACGCAGT
GCTCAGGCGCGGCGCACAGGCCAGCGTCGCCACGAGCGCAGAGGCGGTGG
AGGAGTGGAGCAGGCTGCAGGCGGACTTCCTGGCGGAGGCCACGCAGGCG
GGGCCGCAGCAGTAGCTGCGGCGGCAGCGGCGGTGGCAGCAGTGGCGGCA
GCGGCAGCGGCGGCTGCGGCGGCAGCAGCAGTAGTAGCAGCGGCAGCGGC
GGCAGCGGTGGCAGCGGCAGCAGGCGAACCAGGGGGAGCTGCCGTTGCAG
CACCGGCAGCGGTTGCCACAGCTGCTTGTGCTCATTACACAGCGTGCGCA
GGCGAAGTTACCAGCGGACGCCATGCAGTGGGCGCCGCCGCAGCAGCAGC
AGCGGCGGCGGCAGCAGCAGTAGCAGCAGCATGCATGCTGCAAAGCAGGG
GGGGCTGCCGTTGCGCATTGGCAGCGGCGGCCGCTACAGCAGTCCATGCG
GAGTACGCAATGCGCAGAGTCTGTGCCCATGGCGCGTTGGAGAGTAACCG
CACAGCTTGCGCTGGAATGGATCGTGGTCCTGCGATCACACTGCACAAGT
GTGTGGCATGTTACACGCACAACAGCATCAGTCTTGAAAACG

Coding sequence (CDS) from alignment at Contig_11:25919..37610-

>mRNA_4699 ID=mRNA_4699|Name=jgi.p|Trimin1|347342|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2364bp|location=Sequence derived from alignment at Contig_11:25919..37610- (Tribonema minus UTEX_B_3156 )
ATGGCAGATGTTGACGATCTCAACGATGAGACCTTCGGTGAGGGCGACGG
GGGCGAACTGCCAGCCTTCTTCGCTGCTGGCGGTGGTGGGGACCTGGAGT
TTGCTGCCTTAATGGATGACCTGAAGGCTAGCGCCTTGCAGCAATTGGGG
GAGGAGGATGGCGACGTCATCCTCGCAGGCAGCGATGGCGATGCTGGGGC
GCTGCAGCAGCAGGACACGGATGGCGACTGGGCGCAAATGCAGAAGCAGT
TTGAGCTCATGAGCCGCGACTTCCTGCAGTACCAGAACCAGAGTGACGCG
CGCGGCGGCGGCATCAGCAGCGGCGGCGCCGGCTCGGACCCCCTGGGCTC
CATCGATCAGCAGACTGGCGCCATCGCCTTTGGCATGATGCAGCAGCTGG
GCATGGATGAAGGGGGCTCCCCCAGGCGGCACACGTCGCCCCCCCCCCCC
GCGCCCCCCGCGGCCATGTCTCTCGACGACATCGAGGCACGCTTTTCGCG
GCAAGGGCAATACGCGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCAC
CTCCCCCCCCTCCGCCCCCCACGCACTCTGCCCCCATGGGGGTACCCGGT
CAGGGGGCGGGTGGGCCCCAGATGGGACCCCCTGGGTTTCCCCCTCATGG
GATGATGGGGGGTCCGCAGGGGTCCATGCCCATGCAGATGATGGGGGGGG
GTCCGGGGGATCCACGGGGGCTGCAAATGGGGGGCATGCGGGGGGGGTTG
CCGGGACCCCCCCCCATGGGGGGCCAGCCGATGGTGATGGGGCCCATGGG
GGTGCCTATGGGGGTAGGTATGGGGCCGCAGGGGGGTATGGGGGGTATGG
TGCCGCTGCACCAGCTGCCGCTGCACGTGCAGCACGCGCTGCAGATGCAG
CACCACCACGAGCAGCAGCAGCGCAGGATACAGCAGCTGCAGGCGCAACT
GCAGACGCAGACGCAGAAGGCGCCGCCGCCGCCGCGCGGAAAGGCTGCCG
CCAACGCCACTGCGCAGCACGCGCCGCCGAGTGGCCCTCGGCCCTTCGCG
CCGCAGGCCGACGCGCGCCTGTACCCGCGCGGCGAGCTCATGAGCGGCTA
CGACGTGCGCTTCGTGACGACGGCGCTGCTGCGCGCGCTCGACACGCAGG
ACCCCTACAACGAGGACTTCTACTTCCACAACCTCGTGCGGCGGCGCGAG
GAGCGGCGGCGCCGCGCCGCGCTGCTGGCGCAGGCCGGCGGCGGCGGCGG
AGCGCTGCCTACAGGCCGGCGGCGGCGGCGGCGGAGCGCTGCCTTCAGTT
TGCTCATCCAACGCTCAGCAGTGCCGCTGGTGCAGGCCGGCGGCGGCGGC
TGCAGAGCGCTGCCTTCAGTGACTCTCCCACCGCTGGCACTGCCCGTGTG
GCAGGAGACCAAAGAGCTCTCCAAGAAGGTTGCCAAAGAGCAGGAGGCTA
ACCTCAAAGTGCGCACCAAGGAGTGGGAGAGCGTCAATAGGGTGCTGGGA
CACACATCAAAGTCAGTGGCCAGCCATCCCAGGGCGCTGCTGAATCTGGG
TGTAAACCTGGAAGAGAAGGGCGACCAAGGGCAGCTGTTTGGGACGCCGC
TGTGGCGAGCTAGAGGGTGTGTTCAGACGGCCACAGCTGCGTTGCTGAAG
GTGGAGGAGCTCCAGCATTTCATCAGGCTGCCGGCGCTGCCCAATGAGAA
GAGGGCTTCTGTCATGGCTGAACTACAGACGACAGCCAGCAGCCTAGGTT
CCAGCCTGGGCCTGCAGCCGCGCTCGGAGGCGGCGATGGAGGCGAGCGCC
GCCGTGCGCGCGGCCTTCCAAGATCCCAACGCGTCAGCGGCTCAGCGCAC
CGCCGCGGTGGACGCGGTGACCTCCGCGCTGGAGGGGACCCTGGACCTGC
GGCTGTTGGCGACCCTGCTGGAGCTGGCCAAGGGGCAGCGCGTTGCGACG
CGCGCGCTGCTGCTGCTGCGCCCGGAGGAGCGGTGGGCGATTGTGCCGGC
GGTGCTGGCGCTGACGCTGGCGCGCATGCCGCAGGGGGGGGGGGCGGCGG
GGGGGGGAGGGGGGGGGGGCGGGGGGGAGGAGGCGGCGCTGATGGCGTGC
TTGAGGGGGCTCGTGCAGAGCGCGCAGCCGCCGCCGCCGCTGTCCATACT
CAAGCGCTGTCTGGAACTCGTAATGGCTGCGCACCGGGGCCGCGGAAGCC
TCAAGCCCGCACTCGCCGACCGCGCGCGCGCTGAAGCCATGCACGCAGTG
CTCAGGCGCGGCGCACAGGCCAGCGTCGCCACGAGCGCAGAGGCGGTGGA
GGAGTGGAGCAGGCTGCAGGCGGACTTCCTGGCGGAGGCCACGCAGGCGG
GGCCGCAGCAGTAG