mRNA_4693 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349661
Unique NamemRNA_4693
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A835YUL3_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL3_9STRA)

HSP 1 Score: 653 bits (1685), Expect = 1.690e-235
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 1
Query:    1 MQTGGKQRRAKRRAERKTELPPAVAEQKQAGFTAVAVALVAALALGDACVQLAHSQAPLVQAVGDKLAAAAASSHFSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALMP 1113
            MQTGGKQRRAKRRAERKTELPPAVAEQKQAGFTAVAVALVAALALGDACVQLAHSQAPLVQAVGDKLAAAAASSHFSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALMP
Sbjct:    1 MQTGGKQRRAKRRAERKTELPPAVAEQKQAGFTAVAVALVAALALGDACVQLAHSQAPLVQAVGDKLAAAAASSHFSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALMP 371          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: D8LCN2_ECTSI (Adenine nucleotide translocator 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN2_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.790e-89
Identity = 158/310 (50.97%), Postives = 200/310 (64.52%), Query Frame = 1
Query:  223 HFSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMD--------------PNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALM 1110
            H +   S+  G GAG TRA SR +TFPLDT+KTR Q+SRL  +  A LP  ++  V  P++ KG+F GF  FL QAGPSNAAFFL +D+LN +GAA   G D              P   HL AS +ATVP+NL+R P+EV+KQRLQVG+ SGN+L A  +I+  +G+ GLFVGG  QL REIPFNA+QF  Y+ LK +L                  + L  DA LGA ++ A +L TQP+DT KTR+MT++VPG   G   G ++SA  VA+AEG+ SL+LG LPRL+LVSTGGAFYF GQE    LM
Sbjct:  165 HLTPLRSVATGLGAGFTRAASRTLTFPLDTIKTRSQLSRLGADDRALLPTEMRRLVDGPATFKGVFKGFSAFLAQAGPSNAAFFLFYDSLNAIGAAAILGGDGSGGISPSPSSSLWPTALHLGASSVATVPANLVRTPAEVVKQRLQVGRESGNSLQAFLSIVRAEGVKGLFVGGKEQLLREIPFNAVQFTVYECLKASLG----------------SSELWADAALGAASSAAGALATQPVDTVKTRVMTKSVPGSLGGDSPGFLKSASLVAEAEGVTSLFLGLLPRLVLVSTGGAFYFWGQEFASQLM 458          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A6H5JB89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB89_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 2.830e-89
Identity = 161/310 (51.94%), Postives = 200/310 (64.52%), Query Frame = 1
Query:  223 HFSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMD--------------PNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALM 1110
            H +  +S+  G GAG TRAVSR +TFPLDT+KTR Q+SRL  +  A LP  +   +  P++ KG+F GF  FL QAGPSNAAFFL +DALN +GAA   G D              P   HL AS  ATVP+NL+R P+EV+KQRLQVG+ SGN+L AL +I+  +G  GLFVGG  QL REIPFNA+QF  Y+ LK +L                  + L  DA LGA ++ A +L TQP+DT KTR+MT++VPG   G   G I+SA  VA+AEG+ SL+LG LPRL+LVSTGGAFYF GQE    LM
Sbjct:  257 HLTPLKSVATGLGAGFTRAVSRTLTFPLDTIKTRSQLSRLGADDRALLPEEMLRLIDGPATFKGVFKGFSAFLAQAGPSNAAFFLFYDALNAIGAAAILGADGSGGISPSLSSSLWPTALHLGASSAATVPANLVRTPAEVVKQRLQVGRESGNSLQALLSIVRAEGAKGLFVGGKEQLLREIPFNAVQFTVYECLKASLG----------------SSELWADAALGAASSAAGALATQPVDTVKTRVMTKSVPGSLGGDSPGFIKSASLVAEAEGVTSLFLGLLPRLVLVSTGGAFYFWGQEFASQLM 550          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A4D9D6P8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6P8_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.000e-53
Identity = 138/314 (43.95%), Postives = 173/314 (55.10%), Query Frame = 1
Query:  226 FSVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQ-------------ENVLNPSSS--KG-LFSGFGPFLLQAGPSNAAFFLTFDALNVLGAAL-APGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIE--------SAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQE 1092
            +S ++SLLAGA AG++R +SR+VTFPLDT+KTR Q   L ++       G               E V   +S+  KG LF G  P LL AGP+NAAFF+T+D L  L  AL AP        LAAS LA++PSNLIRIP+EV KQR+Q GQ    A+ A   IL T+G  GL+VGG + L REIPFNA+QF+AY  LK  L                  A +   A+LGA+AAG ASL TQP+DT KT  M      +   G     E        SA  + +  G+  LYLG+ PR  L + GGAFYF   E
Sbjct:  173 YSFQKSLLAGAAAGVSRGLSRIVTFPLDTIKTRQQAVLLRQDSEGEGGRGXXXXAEGASREGDRFEAVAKRASNVKKGNLFDGLLPMLLIAGPANAAFFVTYDYLGALATALGAPPKGHLFIELAASLLASLPSNLIRIPAEVTKQRVQAGQAP-KAVVAAATILKTEGPLGLYVGGGAHLLREIPFNAVQFLAYRNLKDVLVATQGGTP----------ASVSAKAILGAVAAGLASLCTQPLDTVKTAQMLNVKKRRALEGELREKEEVEETYWGSASRIYRLFGLPGLYLGSAPRFSLCAVGGAFYFFANE 475          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: M1V6P2_CYAM1 (Probable mitochondrial carrier proteins Pet8p n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6P2_CYAM1)

HSP 1 Score: 148 bits (373), Expect = 5.150e-38
Identity = 100/294 (34.01%), Postives = 156/294 (53.06%), Query Frame = 1
Query:  229 SVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRALM 1110
            S +  L++GA AG    ++ LV FPLDT+KTRLQV            PG +   L   + +G+++G  P ++ + P+ AAFF T+D L        P   P L H+ A+    +  + +R+P EV+KQ LQ G    +++DA+ AI+S +GI GL+ G  S ++RE+PF+ ++F  Y+A K   +                       AL G+ A G A+  T P+D  KTR+MTR+       G  G ++    +A+ EGI +L+ G  PR+L +S GGA +F G E  ++L+
Sbjct:   43 SFRVGLISGAAAG---TIADLVLFPLDTLKTRLQV------------PGSR---LGAQTFRGIYNGILPAIVASAPAAAAFFGTYDWLKKTLTINFPQSAPPLVHMVAAVGGDLAGSFMRVPFEVVKQNLQAGYYR-SSVDAVSAIVSKEGIRGLYRGWGSLIAREVPFDILEFPLYEAFKKIWSRRKGRALETWE-----------SALCGSAAGGIAAACTTPLDVVKTRLMTRSASAATQQGIWGTMQQ---IAREEGIGTLFSGTTPRILWISLGGALFFGGYEATKSLL 303          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: D8TJR5_VOLCA (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=D8TJR5_VOLCA)

HSP 1 Score: 138 bits (347), Expect = 3.000e-34
Identity = 89/280 (31.79%), Postives = 149/280 (53.21%), Query Frame = 1
Query:  241 SLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYF 1080
            +L AGA AG       L  +P+DT+KTRLQ         A +  G  +++L     KGL++G    L    P++A F   ++       +  P     L  + A  +A   S+LIR+P+EV+KQRLQ G+ +G A+ A+R IL  +G+ GL+ G  + + R++PF+AI+FVAY+ +K A  +               + H    +++GA+A G   + T P+D  KTR+MT+   G++      ++++ + +A+ EG+ +   G  PRL+ +S GG  +F
Sbjct:   53 NLAAGATAG---CAVELALYPIDTIKTRLQ---------AMIGGGGLKSLLQSGGGKGLYAGVWGNLAGVAPASAIFMAFYEPTKKAVQSEVPADKQYLGPVVAGMVAGTASSLIRVPTEVVKQRLQTGEFTG-AVKAVRTILGREGLRGLYAGYGAFMLRDLPFDAIEFVAYEQIKKAYGMTVRR-----------ELHPGETSIVGAIAGGFTGVITTPLDVLKTRLMTQGASGRYKN----LLDATVTIARTEGLGAFMSGWQPRLIWISLGGFVFF 304          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A6T6BMA0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BMA0_9RHOD)

HSP 1 Score: 137 bits (345), Expect = 2.650e-33
Identity = 99/289 (34.26%), Postives = 153/289 (52.94%), Query Frame = 1
Query:  244 LLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDAL-NVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGV----IESAI-AVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQE 1092
            +LAGA AG    +     +PLDT+KTRLQ    S              + + +  + ++ G GP +L + P+ A FF T++AL +V+G+ L PG    LTHL A+    +  + +R P EV+KQR+Q G  S + + A+R+IL+++G+ GL+ G  S + RE+PF+ I+F  Y+ LK +                        ++L G+ A G A+  T P+D  KTR+M +       G GG V    I+  I  + K EG A+L+ G LPR++ +S GGA +F G E
Sbjct:  122 MLAGAVAG---TIVDFTLYPLDTIKTRLQAGPSS--------------IASQNIWQNIYRGLGPAVLASAPAAAMFFGTYEALKSVVGSCLGPGAA-TLTHLVAAAGGDIVGSTVRAPFEVVKQRMQTGAYS-SGITAVRSILASEGVGGLYAGYLSLVLRELPFDLIEFPLYEFLKASWTRRRGQTLDTWQ-----------NSLCGSAAGGVAAALTTPLDVVKTRLMVQ-------GAGGSVKYLGIQHGIQTILKEEGAAALFAGILPRVIWISLGGAIFFGGYE 373          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A1X6NJF7_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJF7_PORUM)

HSP 1 Score: 134 bits (338), Expect = 8.610e-33
Identity = 99/293 (33.79%), Postives = 151/293 (51.54%), Query Frame = 1
Query:  244 LLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAP---GMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTR---TVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQELVRA 1104
            L+AGA AG    V   V FPLDT KTR+Q +  +              V   +  +GL++G  P ++ + P+ AAFF T+DAL  + A   P   G    + H+ A+    V S+ +R P EV+KQRLQ G +   + DA+R++  T G  G + G  S + RE+PF+A+QF  Y+ALK   A +                     +  G+ A   ++  T P+D  KTR+MT+   TVP +      GV++    +A+ EG A+L  G LPR++ ++ GGA +F G E+ +A
Sbjct:   47 LVAGAVAGTAVDV---VLFPLDTFKTRVQAAGTAA-------------VARSALLRGLYAGIAPAVIASAPAAAAFFGTYDALKRVLADSIPDGHGRAAPVAHMLAAAGGDVASSTVRAPFEVVKQRLQAG-LHATSADAVRSVWRTSGARGFYAGYGSLVLRELPFDALQFPLYEALKTRWAASRARAGYPNEGRL----QTWQTSACGSAAGAVSAAVTTPLDVVKTRMMTQKAGTVPYK------GVVDGLSRIAREEGAAALAAGMLPRVVWIALGGAIFFGGYEVTKA 312          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A7S2ZWA6_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWA6_9RHOD)

HSP 1 Score: 134 bits (338), Expect = 9.360e-33
Identity = 109/326 (33.44%), Postives = 166/326 (50.92%), Query Frame = 1
Query:  160 HSQAPL-----VQAVGDKLAAAAASSHF-------SVKESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMD-PNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMV--DALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYFLGQE 1092
            HS  PL     + A GD++  A+A S         S K  L++GA AG    V   V FPLDT+KTRLQ    +++ +  L              KG+++G  P +L + P+ AAFF T+D L  +   L P        H+ A+    +  + +R+P EV+KQRLQ G  + +A  A+++IL+++G+ GL+ G  S + RE+PF+ I+F  Y+ LK   A                D  L     AL G+ A G A+  T P+D  KTR+M +  PG++SG    V ++   ++  EG+  L  G +PR+L +S GG  +F G E
Sbjct:   32 HSGNPLDGLIRLLAGGDRITVASAGSSSDDLSPGESFKIGLISGAIAG---TVVDFVLFPLDTLKTRLQSGTAAKDAMQLL--------------KGIYTGLLPAVLASAPAGAAFFGTYDYLKRVFKQLDPEEKLATFHHMVAAAGGDIAGSAVRVPFEVVKQRLQAGAYT-SASQAVKSILASEGVRGLYTGFGSLVIREMPFDLIEFPLYEYLKVVWA------------RHNGDKPLATWQTALCGSAAGGFAAGVTTPLDVVKTRLMLQEQPGKYSG----VWDALKKISAEEGVQVLASGIVPRVLWISLGGFIFFGGYE 323          
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Match: A0A1J3F2W2_NOCCA (Putative S-adenosylmethionine carrier 2, chloroplastic n=2 Tax=Brassicaceae TaxID=3700 RepID=A0A1J3F2W2_NOCCA)

HSP 1 Score: 132 bits (331), Expect = 6.640e-32
Identity = 91/281 (32.38%), Postives = 146/281 (51.96%), Query Frame = 1
Query:  238 ESLLAGAGAGLTRAVSRLVTFPLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQAGPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSEVIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQFVAYDALKHALAVAXXXXXXXXXXXXXXDAHLMVDALLGALAAGAASLGTQPMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLLLVSTGGAFYF 1080
            ESL+AG  AGL   V     +P+DT+KTR+QV+R   + +                 KGL+SG G  L    P++A FF  ++        + P     + HLAA  L    S+++R+P+EV+KQR+Q GQ + +A DA+R I++ +G  G++ G  S L R++PF+A+QF  Y+ L+    +A              D +   +A+LGA A     + T P+D  KTR+M +    Q+ G    V +    + + EG ++L+ G  PR+L +  GG+ +F
Sbjct:   56 ESLIAGGIAGL---VVEAALYPIDTIKTRVQVARDGGKIIW----------------KGLYSGLGGNLAGVLPASALFFGVYEPTKQKLLKVLPEQFSAVAHLAAGALGGAVSSIVRVPTEVVKQRMQTGQFA-SAPDAVRLIIAKEGFRGMYAGFGSFLLRDLPFDALQFCVYEQLRIGYKLAARR-----------DLNDPENAMLGAFAGAVTGVLTTPLDVIKTRLMVQGAGNQYKG----VSDCIKTILREEGSSALWKGMGPRVLWIGIGGSIFF 301          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349661 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUL3_9STRA1.690e-235100.00Mitochondrial carrier domain-containing protein n=... [more]
D8LCN2_ECTSI1.790e-8950.97Adenine nucleotide translocator 3 n=1 Tax=Ectocarp... [more]
A0A6H5JB89_9PHAE2.830e-8951.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D6P8_9STRA3.000e-5343.95Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
M1V6P2_CYAM15.150e-3834.01Probable mitochondrial carrier proteins Pet8p n=1 ... [more]
D8TJR5_VOLCA3.000e-3431.79Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
A0A6T6BMA0_9RHOD2.650e-3334.26Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NJF7_PORUM8.610e-3333.79Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S2ZWA6_9RHOD9.360e-3333.44Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A1J3F2W2_NOCCA6.640e-3232.38Putative S-adenosylmethionine carrier 2, chloropla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:902681..906167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349661|estExt_Genemark1.C_Ctg_460135
KEGG TC2.A.29.18,2.A.29.5
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03029
KEGG rclassRC00004,RC00064
KEGG ReactionR00259
KEGG ModuleM00028
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG koko:K14682,ko:K15111,ko:K15113
EC2.3.1.1
DescriptionS-adenosyl-L-methionine transmembrane transport
COG categoryU
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
Evalue2.93e-90
Seed ortholog2880.D8LCN2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-03_002250.1
TranscriptId349983
TrackFilteredModels1
ProteinId349661
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349661gene_4693Tribonema minus UTEX_B_3156 geneContig_46 902681..906167 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349661Trimin1|349661|estExt_Genemark1.C_Ctg_460135Tribonema minus UTEX_B_3156 polypeptideContig_46 902681..906167 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4693_5exon_4693_5Tribonema minus UTEX_B_3156 exonContig_46 902681..902896 -
exon_4693_4exon_4693_4Tribonema minus UTEX_B_3156 exonContig_46 904354..904653 -
exon_4693_3exon_4693_3Tribonema minus UTEX_B_3156 exonContig_46 905131..905480 -
exon_4693_2exon_4693_2Tribonema minus UTEX_B_3156 exonContig_46 905778..906021 -
exon_4693_1exon_4693_1Tribonema minus UTEX_B_3156 exonContig_46 906162..906167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4693CDS_4693Tribonema minus UTEX_B_3156 CDSContig_46 906162..906167 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4693 ID=mRNA_4693|Name=jgi.p|Trimin1|349661|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1116bp|location=Sequence derived from alignment at Contig_46:902681..906167- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAACAGGGGGGAAGCAAAGGCGAGCGAAGCGGCGCGCTGAGAGGAA
GACGGAGCTGCCACCTGCTGTCGCAGAACAGAAACAGGCCGGTTTTACAG
CCGTGGCGGTAGCGCTCGTGGCTGCGCTGGCGTTGGGGGACGCATGCGTT
CAGTTGGCGCACAGCCAAGCTCCGCTGGTGCAGGCCGTAGGCGACAAGCT
CGCTGCAGCGGCTGCCAGCTCGCATTTCAGCGTGAAGGAGAGCTTGCTAG
CCGGTGCGGGGGCGGGACTGACGCGCGCAGTGTCCCGCCTCGTCACCTTC
CCCCTGGACACTGTCAAAACGCGCCTGCAAGTGAGCCGCCTCTCAGAAGA
GCAGCTAGCCCGGCTCCCTCCGGGGGTACAGGAGAACGTCCTCAACCCCT
CCAGCAGCAAGGGCCTCTTCAGCGGATTTGGCCCGTTTCTGCTGCAGGCG
GGGCCCAGCAACGCCGCCTTCTTCCTCACGTTCGACGCGCTGAACGTTCT
CGGCGCGGCGCTCGCGCCGGGGATGGACCCCAACCTGACGCACCTCGCCG
CGTCGTGCCTCGCGACGGTGCCCAGCAACCTCATACGCATACCCTCGGAG
GTCATCAAGCAGCGCCTGCAGGTCGGCCAGGTGAGCGGCAACGCGCTCGA
CGCGCTGCGCGCCATACTGAGCACTGACGGCATCGCGGGGCTCTTTGTCG
GCGGCACGTCTCAGCTGAGCCGCGAGATACCCTTCAACGCGATACAGTTT
GTCGCGTACGACGCGCTCAAGCACGCGCTGGCGGTGGCGGCGGCGGCGGC
GGCGGGCGCCGCCGGCGGCGGCGGCGGCGGGGATGCGCACTTGATGGTGG
ACGCGCTGCTGGGGGCGCTGGCGGCGGGCGCGGCGTCGCTCGGCACGCAG
CCCATGGACACCACCAAAACGCGCATCATGACGCGCACCGTCCCCGGCCA
GCACAGCGGCGGCGGCGGCGGCGTCATAGAGTCTGCCATCGCCGTCGCAA
AGGCGGAGGGCATCGCGTCGCTGTACCTCGGCGCACTGCCGCGGCTGCTG
CTCGTCAGCACGGGCGGCGCGTTCTATTTCCTCGGCCAGGAGCTGGTGCG
CGCGCTGATGCCGTAG
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protein sequence of jgi.p|Trimin1|349661

>Trimin1|349661|estExt_Genemark1.C_Ctg_460135 ID=Trimin1|349661|estExt_Genemark1.C_Ctg_460135|Name=jgi.p|Trimin1|349661|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=372bp
MQTGGKQRRAKRRAERKTELPPAVAEQKQAGFTAVAVALVAALALGDACV
QLAHSQAPLVQAVGDKLAAAAASSHFSVKESLLAGAGAGLTRAVSRLVTF
PLDTVKTRLQVSRLSEEQLARLPPGVQENVLNPSSSKGLFSGFGPFLLQA
GPSNAAFFLTFDALNVLGAALAPGMDPNLTHLAASCLATVPSNLIRIPSE
VIKQRLQVGQVSGNALDALRAILSTDGIAGLFVGGTSQLSREIPFNAIQF
VAYDALKHALAVAAAAAAGAAGGGGGGDAHLMVDALLGALAAGAASLGTQ
PMDTTKTRIMTRTVPGQHSGGGGGVIESAIAVAKAEGIASLYLGALPRLL
LVSTGGAFYFLGQELVRALMP*
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mRNA from alignment at Contig_46:902681..906167-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4693 ID=mRNA_4693|Name=jgi.p|Trimin1|349661|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3487bp|location=Sequence derived from alignment at Contig_46:902681..906167- (Tribonema minus UTEX_B_3156 )
ATGCAAGTACCGCAATAGGGTTTGTGAGTCCTGCTTCGGCGTTGGCTTCC ACTCACTGCAAGGTCGCTGCGCTAGCCAACGCTCAGCCTCCTTCCCTCCA GAGGGTACGCTCCCTCCAAGCTTTGAAGGCGGTCTCCGCGCCTCAGACAG GGGGGAAGCAAAGGCGAGCGAAGCGGCGCGCTGAGAGGAAGACGGAGCTG CCACCTGCTGTCGCAGAACAGAAACAGGCCGGTTTTACAGCCGTGGCGGT AGCGCTCGTGGCTGCGCTGGCGTTGGGGGACGCATGCGTTCAGTTGGCGC ACAGCCAAGCTCCGCTGGTGCAGGCCGTAGGCGACAAGCTCGCTGCAGCG GCTGCCAGCTCGCATTTCAGCGTGAAGGAGAGCTTGCTAGGTACGTGTGC TGCCATTGACCGTACGCGTGCCATTGTTGCAATTTGCTACGCGAGTTCCC AGGGGCGTACTGTGCCCGATAAGCTTGTTGAACTGCCGCCGAGCATGAGA CACGTGCCGGCGTGCTACAGTCATGCATTTTGTTCACCTGCACTGCTTCT TGACTGTGCTTCTGTAGACCTGCCAAGCGTGACCCATGGCAAGCCCTTCC GCATTCTCACACACAAAGGAATCAGCAAGCATGGCTGTCGTTTCTCAGCC AAGCACCCCCCCCCCTCACGCAACCCCTCTCATGCAGCCGGTGCGGGGGC GGGACTGACGCGCGCAGTGTCCCGCCTCGTCACCTTCCCCCTGGACACTG TCAAAACGCGCCTGCAAGTGAGCCGCCTCTCAGAAGAGCAGCTAGCCCGG CTCCCTCCGGGGGTACAGGAGAACGTCCTCAACCCCTCCAGCAGCAAGGG CCTCTTCAGCGGATTTGGCCCGTTTCTGCTGCAGGCGGGGCCCAGCAACG CCGCCTTCTTCCTCACGTTCGACGCGCTGAACGTTCTCGGCGCGGCGCTC GCGCCGGGGATGGACCCCAACCTGACGCACCTCGCCGCGTCGTGCCTCGC GACGGTGCCCAGCAACCTCATACGCATACCCTCGGAGGTGAGCGCCGCGG CGCGCGCCGCCTGTCGGCGCTGCCGCTGCGGCGGCCGCCGCCGCTGCTGC CGCCGCTGCTGCTGCTGCGACCTGGCTGTGTGCGCTTACTGAGAAGGCGG AACGTGCATTTCTACACAACTACCTGGTCATAGGCTGCTGTGTGAGAGGA GCACAGGTCTTGCTCAGCGCACACCATCGTCTTGTGACAATGCTGCCATC TTCAGCAACACGCGGCTGCACCCTTGTCAAGTACAGCCCAGAGCACACGC ACGATCTGTAGACCATGTCATCACGAGCCTGCACAGGGGGCTTGCACGGA GCCGCAGAGCAATGCTGCTGCTGTCCTCCCATCGGCGCGTGCGCACGCAC GATTTCGCCAACAATCGCCATGTCCAATGTCGCCGCATGGCGCCGACCGC CAATTCCTCACGCCGCTGCCACCGCCGCCGCCTCCGCTGGTGCTGCCGCC GCTGCTGCTGCCAGGTCATCAAGCAGCGCCTGCAGGTCGGCCAGGTGAGC GGCAACGCGCTCGACGCGCTGCGCGCCATACTGAGCACTGACGGCATCGC GGGGCTCTTTGTCGGCGGCACGTCTCAGCTGAGCCGCGAGATACCCTTCA ACGCGATACAGTTTGTCGCGTACGACGCGCTCAAGCACGCGCTGGCGGTG GCGGCGGCGGCGGCGGCGGGCGCCGCCGGCGGCGGCGGCGGCGGGGATGC GCACTTGATGGTGGACGCGCTGCTGGGGGCGCTGGCGGCGGGCGCGGCGT CGCTCGGCACGCAGGTGAACTTCAACTTCAACAGCGTGTGTGCTCTTGTT TTGATGGTGTTGAGGGTTTTGGGGCGGAGCTCGGTTGTTAATGGTTGCCG GTGAGGTGCGTTGAGAGTTCAATGTGGGCAAGGAGAAATAAATGGCGTGA GCAAGGCGCATTAAGGAATGGGGCGGGAATCCGCTGCGGGCAGCCAACGA GCTGTAGGGCGCATTTGTGGGAGCTGGCGTAGCAGTGCTCAGCACTTGGG TGTGCTGTTGACTCACTTCTGCTGCTGAAGTGCAGTGCATTGGCGCTCAG CGGTGGCGAACGCGTGGGTCACCACTCGCAAAGCCGACGTCCCGCGGCAG TGAAGGTGGATGTGCCTTCAGGGGCGGTGTCTAGCTTTTTTCGTGCAGCA TTGCTCAGCACGCAGACATCTGCCATGTTCATGTTCTGATGTTGTAGATC CAGGGAGCGGTCCAACCAGAAGCGTTTGCGACTTCTGAGCTGCCAAAGGC ATCTGTTCATGGTATGAAACGTTGTAGGCGAGGGACCCTTCAGGGCGCGA GCCTTCTTAAGTCATGGCGCGCGCAAGCCTCCGCACTACTGATGCATCTG GGCGTGCTGATTTTTGCGGCCCGTGCATATGCCGTGCGTATTGCTGCAAC CGTTCACCAATCAGCGCGCAGGGGTTCTGTTGCCGCTCCCAGCGGCAACA CTCTCCGGCAACATCCAGGAAGCTGCCAGCTGATTCTGGCGCTGGCTCTC CAGCTCGCGAGGTGTTGTTGCACAGGCGGCACTGACCGCATGCAGCGTTT TGGCACCTGGCATGTATCGCATTGCAGTATCAAGCCTGCGGCCATGCTTC GCGGCCTGCAGAGCTCTCGAGGGCTCACGGTCTCAAGTTCTATCGTCTAC TTCAAAGCCGTTACGCGCAACTTCACTTCCTGAGGCACTTGGAGGGGCTA CTTAGGGTTAGGGCCAGAAACTGGAGGTGGTGTTGATGTGCTAAACGTGG CAGGACGGCTTAATGGCAATGCAGATGTAATCCCGCACCATGCGCATAAC ATGATCTCAGTGCAACAGAAAACTTGAGGTGATGCGCATGTTTCCTTTCA AGCAAATGTTGAGGTGATGACCTGCTTTAAGCGCAACTTACACAAGAGGC TGTCTGTTTCCGGGTCACTCGCCCCCCATTCCTTTAGGAGGGGGGTGCTT TCTTGTGAGCTTGAATTCCCTCGCCTCTGGGGTACCACATGGCCTCTTGC ACGCCACGTTCTCCCAGTCAATCAATGGTGCGCACGTTTACGCAGGGGCT GCCCCGGAAGGACATGAATCATGATTCACCATGAGATTGTCCAGGGCGCA GCATTCTCACAAGCATGCATACCCCAGTCACACCGGTGGATGCCTTCATT GTATCTTACTCCCAATAAACTGGTCGCACCACTGACAGCCCCCCCCACCC CCCCCCCCCCCCCGCGCGCAGCCCATGGACACCACCAAAACGCGCATCAT GACGCGCACCGTCCCCGGCCAGCACAGCGGCGGCGGCGGCGGCGTCATAG AGTCTGCCATCGCCGTCGCAAAGGCGGAGGGCATCGCGTCGCTGTACCTC GGCGCACTGCCGCGGCTGCTGCTCGTCAGCACGGGCGGCGCGTTCTATTT CCTCGGCCAGGAGCTGGTGCGCGCGCTGATGCCGTAG
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Coding sequence (CDS) from alignment at Contig_46:902681..906167-

>mRNA_4693 ID=mRNA_4693|Name=jgi.p|Trimin1|349661|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1116bp|location=Sequence derived from alignment at Contig_46:902681..906167- (Tribonema minus UTEX_B_3156 )
ATGCAAACAGGGGGGAAGCAAAGGCGAGCGAAGCGGCGCGCTGAGAGGAA
GACGGAGCTGCCACCTGCTGTCGCAGAACAGAAACAGGCCGGTTTTACAG
CCGTGGCGGTAGCGCTCGTGGCTGCGCTGGCGTTGGGGGACGCATGCGTT
CAGTTGGCGCACAGCCAAGCTCCGCTGGTGCAGGCCGTAGGCGACAAGCT
CGCTGCAGCGGCTGCCAGCTCGCATTTCAGCGTGAAGGAGAGCTTGCTAG
CCGGTGCGGGGGCGGGACTGACGCGCGCAGTGTCCCGCCTCGTCACCTTC
CCCCTGGACACTGTCAAAACGCGCCTGCAAGTGAGCCGCCTCTCAGAAGA
GCAGCTAGCCCGGCTCCCTCCGGGGGTACAGGAGAACGTCCTCAACCCCT
CCAGCAGCAAGGGCCTCTTCAGCGGATTTGGCCCGTTTCTGCTGCAGGCG
GGGCCCAGCAACGCCGCCTTCTTCCTCACGTTCGACGCGCTGAACGTTCT
CGGCGCGGCGCTCGCGCCGGGGATGGACCCCAACCTGACGCACCTCGCCG
CGTCGTGCCTCGCGACGGTGCCCAGCAACCTCATACGCATACCCTCGGAG
GTCATCAAGCAGCGCCTGCAGGTCGGCCAGGTGAGCGGCAACGCGCTCGA
CGCGCTGCGCGCCATACTGAGCACTGACGGCATCGCGGGGCTCTTTGTCG
GCGGCACGTCTCAGCTGAGCCGCGAGATACCCTTCAACGCGATACAGTTT
GTCGCGTACGACGCGCTCAAGCACGCGCTGGCGGTGGCGGCGGCGGCGGC
GGCGGGCGCCGCCGGCGGCGGCGGCGGCGGGGATGCGCACTTGATGGTGG
ACGCGCTGCTGGGGGCGCTGGCGGCGGGCGCGGCGTCGCTCGGCACGCAG
CCCATGGACACCACCAAAACGCGCATCATGACGCGCACCGTCCCCGGCCA
GCACAGCGGCGGCGGCGGCGGCGTCATAGAGTCTGCCATCGCCGTCGCAA
AGGCGGAGGGCATCGCGTCGCTGTACCTCGGCGCACTGCCGCGGCTGCTG
CTCGTCAGCACGGGCGGCGCGTTCTATTTCCTCGGCCAGGAGCTGGTGCG
CGCGCTGATGCCGTAG
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