mRNA_4501 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349344
Unique Name	mRNA_4501
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Match: A0A835YTA0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA0_9STRA)

HSP 1 Score: 1571 bits (4069), Expect = 0.000e+0
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 1

Query:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI 2463
            MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI
Sbjct:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI 821

[Close]

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Match: A0A835Z2G4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G4_9STRA)

HSP 1 Score: 758 bits (1958), Expect = 1.810e-264
Identity = 424/555 (76.40%), Postives = 438/555 (78.92%), Query Frame = 1

Query:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGE----------------------GDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGS--ASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLA 1593
            MARWARQWPS  AKR HR ALARAR R H ARLRANPDLL+ RRE H  AQ+R LA+QR         RS GGPEPP P EQ+AGE+       +    VPD  ++P SPP+V       RV     G DV                           GD  AEPA   PAAA  E WE+ERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAG CLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLG EGRK G   ASFVDAWRSGAVQTAFVEHVRRRL EDSPKPTIL LETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRR SPLKHAFRSQPMMVGQEISA AAEAAVRAIDYILREDLM YIAGEGEARRRAAGASGAG LWHDAPRE ASAFPAY RG+RVLLPLDYRFPP+GGEGA    VADR P    A E RATRS    L ++P A
Sbjct:    1 MARWARQWPSESAKRHHRAALARARNRVHAARLRANPDLLKRRRELHREAQRRCLARQRELLRAGSGNRSDGGPEPPTPREQRAGEEERAEATADGIPPVPDGVQQPPSPPAVPEPARPERVV--REGDDVAAXXXXXXXXXXXXXXXXXXXXXXXXXGD--AEPADG-PAAAAAERWEDERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGVCLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGGEGRKGGCGPASFVDAWRSGAVQTAFVEHVRRRLAEDSPKPTILLLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRQSPLKHAFRSQPMMVGQEISAAAAEAAVRAIDYILREDLMAYIAGEGEARRRAAGASGAGYLWHDAPREAASAFPAYARGTRVLLPLDYRFPPEGGEGAVPPFVADRSPPAPAAGERRATRSGSRSLVATPPA 550

[Close]

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Match: A0A835YTZ9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTZ9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.530e-5
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 2

Query: 2177 LSAAYDRQTRDLERSARMHEAVLHRYERDDVCRAAMRA 2290
            +SAAYD QTRD ERSA  +EA L RYER DVCRAAMRA
Sbjct:   40 ISAAYDTQTRDAERSAMAYEAKLRRYERVDVCRAAMRA 77

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349344 vs. uniprot

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YTA0_9STRA	0.000e+0	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z2G4_9STRA	1.810e-264	76.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTZ9_9STRA	1.530e-5	76.32	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_41	contig	Contig_41:884467..887464 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349344\|estExt_Genemark1.C_Ctg_410124
Hectar predicted targeting category	mitochondrion
TranscriptId	349666
Track	FilteredModels1
ProteinId	349344

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349344	gene_4501	Tribonema minus UTEX_B_3156	gene	Contig_41 884467..887464 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349344	Trimin1\|349344\|estExt_Genemark1.C_Ctg_410124	Tribonema minus UTEX_B_3156	polypeptide	Contig_41 884467..887464 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4501_3	exon_4501_3	Tribonema minus UTEX_B_3156	exon	Contig_41 884467..884522 -
exon_4501_2	exon_4501_2	Tribonema minus UTEX_B_3156	exon	Contig_41 884626..885426 -
exon_4501_1	exon_4501_1	Tribonema minus UTEX_B_3156	exon	Contig_41 885856..887464 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4501	CDS_4501	Tribonema minus UTEX_B_3156	CDS	Contig_41 885856..887464 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_41:884467..887464-
coding sequence from alignment at Contig_41:884467..887464-

spliced messenger RNA

>mRNA_4501 ID=mRNA_4501|Name=jgi.p|Trimin1|349344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2466bp|location=Sequence derived from alignment at Contig_41:884467..887464- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAGGTGGGCCAGGCAGTGGCCCAGCCCGGAGGCGAAGAGGCAGCA
CAGGGTGGCGCTGGCGAGGGCGAGGTGCAGGACCCACGTGGCCAGGCTGA
GGGCGAACCCCGACCTGCTGAGGAGTAGGAGAGAGCGGCACCTGGCCGCT
CAGAAGAGGTGGCTGGCCAAGCAGAGAGGCGGCGCCGGAGGAGAAGGCGG
TGACCGGTCGACCGGGGGTCCGGAGCCCCCTTACCCCCCGGAACAGCAGG
CGGGGGAGGACGGAGGGACGGGAACGAAGGAGGAGGAATTCCTCTCCGTC
CCGGATGAGGCTCGGCGGCCGTCTTCGCCTCCCTCCGTCCCGGAATCCCC
TCGCTCGGAACGTGTGGACGCGGGGGAGGCGGGGGCCGACGTCCCCCCCC
GGGGGGAAGGGGACGAGGCCGCGGAGCCCGCCCCCGCGGAGCCCGCCGCC
GCGGAAGGGGAGTGGTGGGAGGAGGAGCGGGGCCCGTCCTCCCCCCCTCC
CTACCTCAAGGACGGCTACTGCCCCTTCCGGGGGCTCCGCGCCTCCCCCC
CCTGCGCCCGCTACTACGTCGACGACCCCGTCTACGAGCGTCTGAGGCTG
GCCCTCGAGAGGCTGGTGCCCGGCTACGAGCTGCTCGCGGCCTCCAGCTG
CTCGTCCGACCTGCTGGGGCTCGTGCACCAGTGGGCGACGTGTTTCGGGG
GGGAGACCGCGGGGGCGTGCCTGGACCTGGCGAGCGCAGGGGGGCGGGGG
CTGCCGGGGCGCACGTGCGCGGCGCGTCCGCGCGTCGACCGCGAGGCGGA
GGGTCTGCGACCCAAGGAGCAGGTGCTGCGCCTGCTGGGGGAGGAGGGAC
GGAAGAGCGGGTCGGCGTCGTTCGTCGACGCGTGGCGCAGCGGCGCGGTG
CAGACGGCGTTCGTCGAGCACGTCCGGCGGCGCCTCGTCGAGGACTCCCC
CAAGCCCACGATCCTGTTCCTGGAGACCGCCCCGGTCTACTACGACGCCT
GCCTGACGGGGGGGACGCTGAGGGCGCTGGCGTCGCTGTGCGCGCGGCAG
GGCGTCGCCCTCGTGACGGACGAGGTCATGCTGAGCGTCCGCTGCGGCAG
GCCCCTGTCGTCGGACTACGCGCGGTCCTTCCGCCCCGACGCCGCGGTGC
TGGGCAGCAAGGCCCTGGGGTCCGCGTTCGTCGTCGTCCGCAGGCTGAGC
CCGTTGAAGCACGCCTTCCGGAGCCAGCCCATGATGGTGGGGCAGGAGAT
ATCCGCGGAAGCCGCGGAGGCGGCGGTGCGCGCGATCGACTACATATTGA
GGGAAGACCTGATGGGCTACATAGCGGGGGAGGGGGAGGCACGCAGGAGG
GCGGCGGGGGCGAGCGGGGCGGGGGACCTCTGGCACGACGCGCCGAGGGA
GGTCGCCTCGGCCTTCCCGGCGTACACCAGGGGGAGCAGGGTGCTGCTGC
CGCTGGACTACAGATTCCCCCCCGATGGAGGCGAGGGGGCCGCCGAGGAG
ACCGTCGCGGACCGGCCGCCGCCGCCGCCTACGGCGGACGAGGGGCGCGC
GACGCGGTCTCGGCGGTCCCCGCTCCCGTCTTCCCCCCTGGCCCCCCTCG
CGAGCGAGCACGTCTCCGCTGACCTCAGTGAATCCAGCACCAGGGGGGGC
TTGGGTTGTGGAAGTGAGTACCTCATAGATTACGGTCGGAGGGGGCTCCT
CCAGAAGGCGAATGCGCCGCTGCTCCGGCACGGGCGCGCTTTCACTCCCG
GCTGGCCGGACATGAGCCGCCCCGTCAACGCGCGGAGGTTCTCCTTTCGA
GTCCGGGATACCCACGGCAGGCTGGACGCCCCGGGATTCGCGCGGCGCGC
TCTGGGCCTCAAGATCGGGAACCCACGTCGCCCGTCCGAACCCGTCTCCG
AGGTGAGGTACTGCGAGGAGGGGGAGGGATGGGCCTTCTCGGTCCGCTGC
CACCCCGGCAGCGCCAATGTCAGGCGTCACCTCGTGGAGTGTCTGCCGGC
GCCGTTCCGCGAGGGGTGGGACCTGCAGACCGAAGATCCCAACTTGGGCA
CGTCGACGGATGGCAGGGAGGTCTTCGTGGAGCGCTGGGCGGGGCGTGCG
ACCGTCTCCCCCGAGCTCGGGACAGAGGAGCGCAGGGTCTCGGAAGCGAA
AAGGTACCCGTGGACGCGGGAGTGCGCTGTCGGCGGCGTACGACAGGCAG
ACGAGGGACCTGGAGCGATCCGCCAGGATGCACGAAGCGGTGCTGCATCG
CTACGAGAGGGACGACGTCTGCAGAGCCGCGATGCGCGCGCGAACATCTC
GCCCGCCCGCGCCCGCGCCGCGCCGACCGCGGAAACGTCGGGGCCCGCGG
CGTCGGCAGTCGCTTCCGTGACAGTCCCCGCGCTCGCGCCCGCTCCGGCC
GCGGAGGGAAACAGGCGGGACCTGGAGGAGGCGGAGTCCGACGACGACGA
CCAGGACTACATCTGA

protein sequence of jgi.p|Trimin1|349344

>Trimin1|349344|estExt_Genemark1.C_Ctg_410124 ID=Trimin1|349344|estExt_Genemark1.C_Ctg_410124|Name=jgi.p|Trimin1|349344|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=822bp
MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAA
QKRWLAKQRGGAGGEGGDRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSV
PDEARRPSSPPSVPESPRSERVDAGEAGADVPPRGEGDEAAEPAPAEPAA
AEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRL
ALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRG
LPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAV
QTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQ
GVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLS
PLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRR
AAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEE
TVADRPPPPPTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGG
LGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFR
VRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRC
HPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRA
TVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAAS
LREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPA
AEGNRRDLEEAESDDDDQDYI*

mRNA from alignment at Contig_41:884467..887464-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4501 ID=mRNA_4501|Name=jgi.p|Trimin1|349344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2998bp|location=Sequence derived from alignment at Contig_41:884467..887464- (Tribonema minus UTEX_B_3156 )
ATGGCCAGGTGGGCCAGGCAGTGGCCCAGCCCGGAGGCGAAGAGGCAGCA
CAGGGTGGCGCTGGCGAGGGCGAGGTGCAGGACCCACGTGGCCAGGCTGA
GGGCGAACCCCGACCTGCTGAGGAGTAGGAGAGAGCGGCACCTGGCCGCT
CAGAAGAGGTGGCTGGCCAAGCAGAGAGGCGGCGCCGGAGGAGAAGGCGG
TGACCGGTCGACCGGGGGTCCGGAGCCCCCTTACCCCCCGGAACAGCAGG
CGGGGGAGGACGGAGGGACGGGAACGAAGGAGGAGGAATTCCTCTCCGTC
CCGGATGAGGCTCGGCGGCCGTCTTCGCCTCCCTCCGTCCCGGAATCCCC
TCGCTCGGAACGTGTGGACGCGGGGGAGGCGGGGGCCGACGTCCCCCCCC
GGGGGGAAGGGGACGAGGCCGCGGAGCCCGCCCCCGCGGAGCCCGCCGCC
GCGGAAGGGGAGTGGTGGGAGGAGGAGCGGGGCCCGTCCTCCCCCCCTCC
CTACCTCAAGGACGGCTACTGCCCCTTCCGGGGGCTCCGCGCCTCCCCCC
CCTGCGCCCGCTACTACGTCGACGACCCCGTCTACGAGCGTCTGAGGCTG
GCCCTCGAGAGGCTGGTGCCCGGCTACGAGCTGCTCGCGGCCTCCAGCTG
CTCGTCCGACCTGCTGGGGCTCGTGCACCAGTGGGCGACGTGTTTCGGGG
GGGAGACCGCGGGGGCGTGCCTGGACCTGGCGAGCGCAGGGGGGCGGGGG
CTGCCGGGGCGCACGTGCGCGGCGCGTCCGCGCGTCGACCGCGAGGCGGA
GGGTCTGCGACCCAAGGAGCAGGTGCTGCGCCTGCTGGGGGAGGAGGGAC
GGAAGAGCGGGTCGGCGTCGTTCGTCGACGCGTGGCGCAGCGGCGCGGTG
CAGACGGCGTTCGTCGAGCACGTCCGGCGGCGCCTCGTCGAGGACTCCCC
CAAGCCCACGATCCTGTTCCTGGAGACCGCCCCGGTCTACTACGACGCCT
GCCTGACGGGGGGGACGCTGAGGGCGCTGGCGTCGCTGTGCGCGCGGCAG
GGCGTCGCCCTCGTGACGGACGAGGTCATGCTGAGCGTCCGCTGCGGCAG
GCCCCTGTCGTCGGACTACGCGCGGTCCTTCCGCCCCGACGCCGCGGTGC
TGGGCAGCAAGGCCCTGGGGTCCGCGTTCGTCGTCGTCCGCAGGCTGAGC
CCGTTGAAGCACGCCTTCCGGAGCCAGCCCATGATGGTGGGGCAGGAGAT
ATCCGCGGAAGCCGCGGAGGCGGCGGTGCGCGCGATCGACTACATATTGA
GGGAAGACCTGATGGGCTACATAGCGGGGGAGGGGGAGGCACGCAGGAGG
GCGGCGGGGGCGAGCGGGGCGGGGGACCTCTGGCACGACGCGCCGAGGGA
GGTCGCCTCGGCCTTCCCGGCGTACACCAGGGGGAGCAGGGTGCTGCTGC
CGCTGGACTACAGATTCCCCCCCGATGGAGGCGAGGGGGCCGCCGAGGAG
ACCGTCGCGGACCGGCCGCCGCCGCCGCCTACGGCGGACGAGGGGCGCGC
GACGCGGTCTCGGCGGTCCCCGCTCCCGTCTTCCCCCCTGGCCCCCCTCG
CGAGCGAGCGTAAATGAAACCTGTTCTCTCGTGCCTTCTCTCCGCGTCGT
GTCGCGAGTCTTGATGCTCCACAGCTAGTAGGGACGCGGTCCTCGAACCA
GGCCCGCAGCCAGAACACGATAACGCGTAACAAAACACCAAACGCAAAAG
AGGGGACGGCTGGCCGAACCATCTGACCAACTCAGAGACTCTCGAGTCCC
GGGGGTCCCCCCGAAGACGTCTCCCCTGACCTCAGTGAATCCAGCACCAG
GGGGGGCTTTGCGTTCTGGAAGAGAAAATCTCCTTAACAGTCCGTCAGCT
AGTAGGGACGCGGTCCTCGAACCAGGCCCGCAGCCAGACGACGATAACGT
GTACCAAAAACCAAACGCAAAGAGAGGGCGGCGGGATGAACCATCTGACA
AACTCTGAGAGACTCAAGTCCCTGGGGTCCCCCCTCAGACGTCTCCGCTG
ACCTCAGTGAATCCAGCACCAGGGGGGGCTTGGGTTGTGGAAGTGAGTAC
CTCATAGATTACGGTCGGAGGGGGCTCCTCCAGAAGGCGAATGCGCCGCT
GCTCCGGCACGGGCGCGCTTTCACTCCCGGCTGGCCGGACATGAGCCGCC
CCGTCAACGCGCGGAGGTTCTCCTTTCGAGTCCGGGATACCCACGGCAGG
CTGGACGCCCCGGGATTCGCGCGGCGCGCTCTGGGCCTCAAGATCGGGAA
CCCACGTCGCCCGTCCGAACCCGTCTCCGAGGTGAGGTACTGCGAGGAGG
GGGAGGGATGGGCCTTCTCGGTCCGCTGCCACCCCGGCAGCGCCAATGTC
AGGCGTCACCTCGTGGAGTGTCTGCCGGCGCCGTTCCGCGAGGGGTGGGA
CCTGCAGACCGAAGATCCCAACTTGGGCACGTCGACGGATGGCAGGGAGG
TCTTCGTGGAGCGCTGGGCGGGGCGTGCGACCGTCTCCCCCGAGCTCGGG
ACAGAGGAGCGCAGGGTCTCGGAAGCGAAAAGGTACCCGTGGACGCGGGA
GTGCGCTGTCGGCGGCGTACGACAGGCAGACGAGGGACCTGGAGCGATCC
GCCAGGATGCACGAAGCGGTGCTGCATCGCTACGAGAGGGACGACGTCTG
CAGAGCCGCGATGCGCGCGCGAACATCTCGCCCGCCCGCGCCCGCGCCGC
GCCGACCGCGGAAACGTCGGGGCCCGCGGCGTCGGCAGTCGCTTCCGTGA
CAGTCCCCGCGCTCGCGCCCGCTCCGGCCGCGGAGGGAAGTGAAGGGGAA
GAGAGGCGAGCGGGATGCTGCGGCGGCGAGAGAGGCCGCGGTGCGGAGGA
GGGCGGAACGCTCGTTGGCGCTGCCGGAATGCGGGCAGTGAGACAGGCGG
GACCTGGAGGAGGCGGAGTCCGACGACGACGACCAGGACTACATCTGA

Coding sequence (CDS) from alignment at Contig_41:884467..887464-

>mRNA_4501 ID=mRNA_4501|Name=jgi.p|Trimin1|349344|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2466bp|location=Sequence derived from alignment at Contig_41:884467..887464- (Tribonema minus UTEX_B_3156 )
ATGGCCAGGTGGGCCAGGCAGTGGCCCAGCCCGGAGGCGAAGAGGCAGCA
CAGGGTGGCGCTGGCGAGGGCGAGGTGCAGGACCCACGTGGCCAGGCTGA
GGGCGAACCCCGACCTGCTGAGGAGTAGGAGAGAGCGGCACCTGGCCGCT
CAGAAGAGGTGGCTGGCCAAGCAGAGAGGCGGCGCCGGAGGAGAAGGCGG
TGACCGGTCGACCGGGGGTCCGGAGCCCCCTTACCCCCCGGAACAGCAGG
CGGGGGAGGACGGAGGGACGGGAACGAAGGAGGAGGAATTCCTCTCCGTC
CCGGATGAGGCTCGGCGGCCGTCTTCGCCTCCCTCCGTCCCGGAATCCCC
TCGCTCGGAACGTGTGGACGCGGGGGAGGCGGGGGCCGACGTCCCCCCCC
GGGGGGAAGGGGACGAGGCCGCGGAGCCCGCCCCCGCGGAGCCCGCCGCC
GCGGAAGGGGAGTGGTGGGAGGAGGAGCGGGGCCCGTCCTCCCCCCCTCC
CTACCTCAAGGACGGCTACTGCCCCTTCCGGGGGCTCCGCGCCTCCCCCC
CCTGCGCCCGCTACTACGTCGACGACCCCGTCTACGAGCGTCTGAGGCTG
GCCCTCGAGAGGCTGGTGCCCGGCTACGAGCTGCTCGCGGCCTCCAGCTG
CTCGTCCGACCTGCTGGGGCTCGTGCACCAGTGGGCGACGTGTTTCGGGG
GGGAGACCGCGGGGGCGTGCCTGGACCTGGCGAGCGCAGGGGGGCGGGGG
CTGCCGGGGCGCACGTGCGCGGCGCGTCCGCGCGTCGACCGCGAGGCGGA
GGGTCTGCGACCCAAGGAGCAGGTGCTGCGCCTGCTGGGGGAGGAGGGAC
GGAAGAGCGGGTCGGCGTCGTTCGTCGACGCGTGGCGCAGCGGCGCGGTG
CAGACGGCGTTCGTCGAGCACGTCCGGCGGCGCCTCGTCGAGGACTCCCC
CAAGCCCACGATCCTGTTCCTGGAGACCGCCCCGGTCTACTACGACGCCT
GCCTGACGGGGGGGACGCTGAGGGCGCTGGCGTCGCTGTGCGCGCGGCAG
GGCGTCGCCCTCGTGACGGACGAGGTCATGCTGAGCGTCCGCTGCGGCAG
GCCCCTGTCGTCGGACTACGCGCGGTCCTTCCGCCCCGACGCCGCGGTGC
TGGGCAGCAAGGCCCTGGGGTCCGCGTTCGTCGTCGTCCGCAGGCTGAGC
CCGTTGAAGCACGCCTTCCGGAGCCAGCCCATGATGGTGGGGCAGGAGAT
ATCCGCGGAAGCCGCGGAGGCGGCGGTGCGCGCGATCGACTACATATTGA
GGGAAGACCTGATGGGCTACATAGCGGGGGAGGGGGAGGCACGCAGGAGG
GCGGCGGGGGCGAGCGGGGCGGGGGACCTCTGGCACGACGCGCCGAGGGA
GGTCGCCTCGGCCTTCCCGGCGTACACCAGGGGGAGCAGGGTGCTGCTGC
CGCTGGACTACAGATTCCCCCCCGATGGAGGCGAGGGGGCCGCCGAGGAG
ACCGTCGCGGACCGGCCGCCGCCGCCGCCTACGGCGGACGAGGGGCGCGC
GACGCGGTCTCGGCGGTCCCCGCTCCCGTCTTCCCCCCTGGCCCCCCTCG
CGAGCGAGCACGTCTCCGCTGACCTCAGTGAATCCAGCACCAGGGGGGGC
TTGGGTTGTGGAAGTGAGTACCTCATAGATTACGGTCGGAGGGGGCTCCT
CCAGAAGGCGAATGCGCCGCTGCTCCGGCACGGGCGCGCTTTCACTCCCG
GCTGGCCGGACATGAGCCGCCCCGTCAACGCGCGGAGGTTCTCCTTTCGA
GTCCGGGATACCCACGGCAGGCTGGACGCCCCGGGATTCGCGCGGCGCGC
TCTGGGCCTCAAGATCGGGAACCCACGTCGCCCGTCCGAACCCGTCTCCG
AGGTGAGGTACTGCGAGGAGGGGGAGGGATGGGCCTTCTCGGTCCGCTGC
CACCCCGGCAGCGCCAATGTCAGGCGTCACCTCGTGGAGTGTCTGCCGGC
GCCGTTCCGCGAGGGGTGGGACCTGCAGACCGAAGATCCCAACTTGGGCA
CGTCGACGGATGGCAGGGAGGTCTTCGTGGAGCGCTGGGCGGGGCGTGCG
ACCGTCTCCCCCGAGCTCGGGACAGAGGAGCGCAGGGTCTCGGAAGCGAA
AAGGTACCCGTGGACGCGGGAGTGCGCTGTCGGCGGCGTACGACAGGCAG
ACGAGGGACCTGGAGCGATCCGCCAGGATGCACGAAGCGGTGCTGCATCG
CTACGAGAGGGACGACGTCTGCAGAGCCGCGATGCGCGCGCGAACATCTC
GCCCGCCCGCGCCCGCGCCGCGCCGACCGCGGAAACGTCGGGGCCCGCGG
CGTCGGCAGTCGCTTCCGTGACAGTCCCCGCGCTCGCGCCCGCTCCGGCC
GCGGAGGGAAACAGGCGGGACCTGGAGGAGGCGGAGTCCGACGACGACGA
CCAGGACTACATCTGA