mRNA_4417 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349310
Unique NamemRNA_4417
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A836CCR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR9_9STRA)

HSP 1 Score: 751 bits (1940), Expect = 9.670e-270
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 1 
Query:    1 MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ 1527
            MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ
Sbjct:    1 MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ 509
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 7.540e-52
Identity = 154/419 (36.75%), Postives = 203/419 (48.45%), Query Frame = 1 
Query:  310 NARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIV--SMAPQPKGGXXXXXXXXXAAD---------TALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDR----DTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIM-ERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIP-DTDGNP--HAIVRYADERSAGAAIARLSRTTLGTRRI 1509
            N RV V +LA T +  ++ +   + G   +AE+P  A GRS+GYG V F     A  A   +  T +  R I +      Q  GG  XXXXXXX               V+V NLA D +  +LK HM++AG V+  ++     GRS+G   V+F +P       EAR AI  L  + L+GR + V E+R    + G+G                                 G A  +V+VGNLS++  WQ LKDHMR AG  K V +  E  GRS GCA+V Y +  EA  AI  LHDTEL GRLI+VREDRE+                  + +  I      AE R V V+N+  +  W+ LKDHF   G+VQFVEIP D  G    +A VR+  E+ A  AI +L  T L  RRI
Sbjct:   64 NNRVYVGNLAWTVTWKELKDLMGTCGPC-KAEVPCGADGRSRGYGLVTFTSAAGASDAIDRLQDTDLMGRPIYLREDREEQGFGGGGXXXXXXXXXXXXXXXXXNANCKVFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKP------YEARNAISQLSETELMGRPIQVREERGDAGNHGRGVG-------------------------------GAAGAKVYVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEGP----------------IGSKRIGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRI 428
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: H3GHR3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR3_PHYRM)

HSP 1 Score: 155 bits (392), Expect = 2.620e-39
Identity = 125/359 (34.82%), Postives = 173/359 (48.19%), Query Frame = 1 
Query:  463 PDDAVVAART-MSGTIIANRKIIVSMAP---QPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            PD+A  A  T + G      + I   +P   Q + G         AA    VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  +V +           A+ AI TL+ S L GRK+ V EDR+T   AA                          V P+ G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y ++ EA +AI +L+++EL GRLI+VREDRE    EGG            +        G   E R + V N+  +  W++LKD F  VG+V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   26 PDNAGKAKSTWVEGAREKRAERIAQSSPYQVQGRNGDADVDMEQVAAVGCRVYVGNLSWSVKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGVVTYATEEA------AQNAIDTLNDSELGGRKIFVREDRETQPIAA--------------------------VKPKRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQDEANKAIAELNNSELEGRLIFVREDREP---EGGSISK--------LAKRAAAPRGN-GEGRQLYVGNLPWETNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEV 336
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A1Q9DEF6_SYMMI (Putative RNA-binding protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DEF6_SYMMI)

HSP 1 Score: 155 bits (391), Expect = 2.080e-38
Identity = 124/401 (30.92%), Postives = 180/401 (44.89%), Query Frame = 1 
Query:  316 RVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIV--SMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDA---AGRSRGYAIVQFGRPNEXXXXXE---ARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASP--RVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDG---RSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARL 1479
            RV V +L    +  ++ +  +SVG V  A+I T+  GRS+G G V F   +DA  A   ++ + ++ R+I V      Q  G                VYVGNLA      +LK H +S G V   +++++      RS+G  IV+F    E     +   A  A++ L G+ +LGRK+ V EDR++ +                                R+  A P  +VF GNL + VTWQ LKDHMRQ G+  HV I+  D    RS GC +V + +   A RA+  LHD+ L+GRL+YVRE  +D    GG               +  V  G+    +   V N+     W++LKDH  + G V  V +    G   A   Y  E +A  A A L
Sbjct:   31 RVYVSNLPWHVAWQELKDHMKSVGEVVYADIFTEDTGRSRGCGLVAFRRAEDAQRAVLELNDSELSGRQIAVREDRVDQSTG----------ERKDCRVYVGNLAWIATWKDLKDHFRSVGEVKRADILSEGNLEGARSKGAGIVEFSTKEEDLYPSDETRASAAVEQLTGTEILGRKIFVREDRESNRPQTLAWPPGDVWSRAMVAVAQGPGF-------RKSFAEPFTKVFAGNLPYSVTWQQLKDHMRQVGEVLHVEILMDDNDPRRSKGCGVVEFATFGAARRAVQYLHDSMLQGRLMYVREYHDDLKNAGGATA------------TKDVKAGQKFRVK---VGNVASGTRWQDLKDHLKSAGDVAHVAMLPGAGTGAATAAYTSEEAAIRAAATL 399
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.320e-38
Identity = 144/414 (34.78%), Postives = 204/414 (49.28%), Query Frame = 1 
Query:  316 RVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRD---TGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDD------------------GMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEI---PDTDGNPHAIVRYADERSAGAAIARLS 1482
            R+ V +L+ + S  ++ +  +S G VTRA+I     GRS+G G VEF   ++A  A  T++ + +  R+I V    + +            A +  VYVGNLA +    +LK HM+ AG V    ++    GRS+G  IV+F           A+ AI TL+ + L GR++ V EDR+   +G G   Q XXXXXXXXX     X  XXXX        L +  V+VGNL+++ TWQ LKDHMR+ G+     I++  DGRS GC IV Y S  EA+RAI +L ++EL GR I+VREDRE       XXXX                            +  ++      +   + V N+     WR+LKDHF   G V   E+   PD       ++R+     A  AI RL+
Sbjct:   91 RLYVGNLSWSVSWRELKDHMKSAGDVTRADILQTPDGRSKGCGIVEFATAEEASNAVETLNDSELMGRQIFVREDREAEKAAD--------ASSKRVYVGNLAYEVAWQDLKDHMRDAGEVQFAEVMMMNDGRSKGCGIVEFADEEG------AQNAIDTLNDTELCGRQIFVREDREQKVSGGGHHGQHXXXXXXXXXLNRVGXGAXXXXGRY--NNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLN 488
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BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A3R7H492_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H492_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.520e-38
Identity = 114/308 (37.01%), Postives = 152/308 (49.35%), Query Frame = 1 
Query:  604 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  IV +           A+ AI TL+ + L  RK+ V EDR+T   A ++                          P+ G    RV+VGNL ++V WQ LKDHM+QAG   H  ++E   GRS GC +V Y +E EA  AI QL++TEL GRLI+VREDRE           R  A  +G             E R + V N+  D  W++LKD F  VG+V+     E PD       I+RYA+   A  AI RL+   +  R I V
Sbjct:  106 VYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGIVTYATEEA------AQNAIATLNDTELGERKIFVREDRETQAVATTK--------------------------PKRGF---RVYVGNLPWNVKWQELKDHMKQAGTVVHADVLEEAGGRSKGCGLVEYATEEEANNAIAQLNNTELEGRLIFVREDREPEGGSISKFAKRTAAPRNG------------GEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYANPAHAFQAIERLNGLEIEGRLIEV 365
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A2D4CCJ1_PYTIN (RNA binding protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ1_PYTIN)

HSP 1 Score: 151 bits (382), Expect = 9.720e-38
Identity = 116/336 (34.52%), Postives = 158/336 (47.02%), Query Frame = 1 
Query:  604 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRAR----------------------------DDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPD-TDGNP--HAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            VYVGNLA   +  +LK +M+SAG V  V ++ D AGRS+G A+V F          +A++AI TL+ +   GR L V EDRD   G+ +                           P  G    RVFVGNLS+++ WQ LKD+ ++AG   H  +ME   GRS G  +V + +  EA++AI  LHD+EL GR I+VREDRE+ +        RG                                  M  S       + E  ++ V N+   + W+ELKDHF   G V+ VEIP  +DG    + IVR+     A  AI R + T L  R IIV
Sbjct:   25 VYVGNLAWAVQWQDLKDYMRSAGEVERVVLMEDHAGRSKGCAVVTF------VTEADAQRAIHTLNDTEFHGRXLFVREDRDPQSGSNTGAWNPPGPPLAPLLPPPHSVQDAGPPAPTLGR---RVFVGNLSWNIKWQDLKDYFKKAGRVLHADVMEEAGGRSRGFGLVEFSTAEEAQQAIAMLHDSELDGRRIFVREDRENESGSISSIAKRGNIPPPLAPIPIPGSNGAPGMLPXXXXXXXXYSQQMPPSSSYAPAANNEGTTLFVGNLPYGVNWQELKDHFREAGDVEHVEIPQLSDGKSRGYGIVRFVHPDDAMHAIDRFNGTELKGRTIIV 351
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A329T2W9_9STRA (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329T2W9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 9.840e-38
Identity = 114/308 (37.01%), Postives = 157/308 (50.97%), Query Frame = 1 
Query:  604 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  +V +           A+ AI TL+ + L GRK+ V EDR+    AA++                          P  G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +E EA +AI +L++TEL GRLI+VREDRE    EGG      +        S    +G   E+R + V N+  D  W++LKD F  VG V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   78 VYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGVVTYATEEA------AQNAIATLNDTELGGRKIFVREDREAQPTAAAK--------------------------PLRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDREP---EGGSISKFAKRA------SAPHGSG---ESRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEV 337
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: W2R296_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R296_PHYPN)

HSP 1 Score: 150 bits (380), Expect = 1.190e-37
Identity = 121/353 (34.28%), Postives = 164/353 (46.46%), Query Frame = 1 
Query:  469 DAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            D  V  R    T    RKI         GG         ++    VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  IV +           A+ AI TL+ + L GRK+ V EDR+    + ++                          P+ G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +E EA +AI +L++TEL GRLI+VREDRE    EGG                     G   E R + V N+  D  W++LKD F  VG V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   27 DMFVTVRRQRRTYRGGRKIEGESFWGCVGGDEDVEIEQTSSVGCRVYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGIVTYATEEA------AQNAIATLNDTELGGRKIFVREDREAQPTSTAK--------------------------PKRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDREP---EGGSISK--------FAKRAAAPRGS-GEGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNASDAWQAIERLNGLEIEGRLIEV 331
[Close]
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A0P1AA48_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA48_PLAHL)

HSP 1 Score: 149 bits (377), Expect = 3.550e-37
Identity = 110/308 (35.71%), Postives = 151/308 (49.03%), Query Frame = 1 
Query:  604 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 1515
            VYVGNL+   +  +LK HMQ AG V     V +  GRS+G  I+ +           A++AI TL+ + L GRK+ V EDR++   AA +                          P+ G    RV+VGNLS+ V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +  EA  AI +L++TEL GRLI+VREDRE           R  A   G           + E R + V N+  D  W++LKD F  VG+V+     E PD       I+RY     A  AI R++   +  R+I V
Sbjct:   76 VYVGNLSWSIKSQDLKEHMQVAGPVETAT-VLEWNGRSKGCGIITYATEEA------AQEAISTLNDTELGGRKIFVREDRESQFVAAGK--------------------------PKRGF---RVYVGNLSWTVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYSTPEEAATAIAELNNTELDGRLIFVREDREPEGGSISKFAKRSNAPSRG-----------NGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTTAADAWQAIERMNGMEVEGRQIEV 336
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCR9_9STRA9.670e-270100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G466_ECTSI7.540e-5236.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3GHR3_PHYRM2.620e-3934.82Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1Q9DEF6_SYMMI2.080e-3830.92Putative RNA-binding protein n=3 Tax=Symbiodinium ... [more]
A0A7S2KX18_9STRA2.320e-3834.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A3R7H492_9STRA9.520e-3837.01Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4CCJ1_PYTIN9.720e-3834.52RNA binding protein putative (Fragment) n=1 Tax=Py... [more]
A0A329T2W9_9STRA9.840e-3837.01Uncharacterized protein n=25 Tax=Phytophthora TaxI... [more]
W2R296_PHYPN1.190e-3734.28Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A0P1AA48_PLAHL3.550e-3735.71Rna-binding protein n=1 Tax=Plasmopara halstedii T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:234742..245485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349310|estExt_Genemark1.C_Ctg_410034
DescriptionRNA binding
COG categoryH
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota
Evalue1.24e-52
Seed ortholog2880.D7G466
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-02_001450.1
TranscriptId349632
TrackFilteredModels1
ProteinId349310
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349310gene_4417Tribonema minus UTEX_B_3156 geneContig_41 234742..245485 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349310Trimin1|349310|estExt_Genemark1.C_Ctg_410034Tribonema minus UTEX_B_3156 polypeptideContig_41 234742..245485 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4417_1exon_4417_1Tribonema minus UTEX_B_3156 exonContig_41 234742..234780 +
exon_4417_2exon_4417_2Tribonema minus UTEX_B_3156 exonContig_41 235530..235925 +
exon_4417_3exon_4417_3Tribonema minus UTEX_B_3156 exonContig_41 236643..236650 +
exon_4417_4exon_4417_4Tribonema minus UTEX_B_3156 exonContig_41 238226..238418 +
exon_4417_5exon_4417_5Tribonema minus UTEX_B_3156 exonContig_41 239590..239709 +
exon_4417_6exon_4417_6Tribonema minus UTEX_B_3156 exonContig_41 239801..239818 +
exon_4417_7exon_4417_7Tribonema minus UTEX_B_3156 exonContig_41 240342..240483 +
exon_4417_8exon_4417_8Tribonema minus UTEX_B_3156 exonContig_41 241407..241507 +
exon_4417_9exon_4417_9Tribonema minus UTEX_B_3156 exonContig_41 242527..242603 +
exon_4417_10exon_4417_10Tribonema minus UTEX_B_3156 exonContig_41 243852..244068 +
exon_4417_11exon_4417_11Tribonema minus UTEX_B_3156 exonContig_41 244496..244543 +
exon_4417_12exon_4417_12Tribonema minus UTEX_B_3156 exonContig_41 245315..245485 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4417CDS_4417Tribonema minus UTEX_B_3156 CDSContig_41 234742..234780 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4417 ID=mRNA_4417|Name=jgi.p|Trimin1|349310|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1530bp|location=Sequence derived from alignment at Contig_41:234742..245485+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATGTGTTCCATGATCCCGCTCAAGCAGAAGCCCTGCTCAGCATGAG
CCTCGATGACATATCAAAGGCGCGCAAAAAGGCCGACACGCCTTCGGCGT
CAAAGCCCAAGAAAGCCGCTGGCGTTGCAAACGGCGGCGCAGCAGCGGGC
GGCGGGCGCGGCAAGGCCGGCGGCGGCGGCCGCGCGAAGCGGCAGCAGCG
GCAGGCGGCGCAGGCGCCGTACCAGGTGCCGGCGGCGGCGGCGCGCGGCG
GCGGCGCGGCCAACGGGCGGGGCGGGGGCGGCGGCGGCGGCGCGGCGGCG
GCTCGGGGGAATGCGCGTGTGCGCGTGGAGAGCCTGGCGCAGACCGCGAG
TCTCGCGCAGGTGCTGGAGGCGTTTGAGTCGGTGGGGCGCGTGACGCGCG
CGGAGATACCGACGGACGCGGGCGGGCGCTCTCAGGGATACGGCTTCGTC
GAGTTCTTGGACCCAGACGACGCCGTGGTCGCGGCGCGCACCATGTCCGG
CACGATCATCGCCAACCGCAAGATCATCGTGTCGATGGCGCCGCAGCCGA
AGGGGGGGGCGGGGGGCGGGGGGGCGGCGCCGCCCGCCGCCGACACAGCG
CTGGTGTACGTCGGCAACTTGGCTAACGACACCGAGGAACTGGAGCTCAA
GCGGCACATGCAGAGCGCGGGGCGCGTTGTAAACGTCAACATGGTAACCG
ACGCTGCCGGACGGTCCAGGGGGTACGCCATTGTGCAATTCGGCCGGCCG
AATGAGTTCGGCCGGCCGAACGAGGCGCGCAAGGCTATACAGACCCTGCA
CGGCTCGTCGCTCCTGGGGCGCAAGCTCATAGTGCACGAGGACAGGGACA
CGGGCAAGGGCGCGGCGTCGCAGCAGGCGCCGCAGCAGCGCCAGCAGCAG
CAGCAGTCCCGCCAACTCGGCGGGGGGGGCGGCAACAACGGCGGCGTCGT
GCCGCGCGAGGGGCTCGCGTCGCCGCGCGTTTTCGTCGGCAACCTCAGCT
TCGACGTCACGTGGCAGGTGCTCAAGGACCACATGCGGCAGGCGGGCGAT
GCCAAGCACGTGTACATCATGGAGAGGGACGGCCGCTCCGCAGGGTGCGC
GATAGTGACGTACGGCAGCGAGGCGGAAGCGGAGCGCGCCATCGTGCAGC
TGCACGACACGGAGCTGCGCGGGCGGCTCATATACGTGCGCGAGGACCGC
GAGGACAGCAACAGAGAGGGGGGCGGCGGCGGGGGTCGGGGGCGCGCGCG
TGATGACGGCATGGACAACTCCATGATCGTGGACACGGGCCGCGACGCCG
AGGCGCGCTCGGTTATCGTGACCAACATTGACAGGGACATCACGTGGCGC
GAGCTCAAGGACCACTTCAGCGCGGTCGGCAAAGTGCAGTTCGTGGAGAT
CCCCGATACGGATGGCAACCCGCACGCGATCGTGCGCTACGCCGACGAGA
GGTCCGCTGGCGCCGCCATCGCACGCCTCAGCAGGACGACGCTCGGCACG
CGCCGCATCATCGTCCTCGGCTTTCAGTGA
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protein sequence of jgi.p|Trimin1|349310

>Trimin1|349310|estExt_Genemark1.C_Ctg_410034 ID=Trimin1|349310|estExt_Genemark1.C_Ctg_410034|Name=jgi.p|Trimin1|349310|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=510bp
MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANGGAAAG
GGRGKAGGGGRAKRQQRQAAQAPYQVPAAAARGGGAANGRGGGGGGGAAA
ARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFV
EFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGAGGGGAAPPAADTA
LVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRP
NEFGRPNEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQQAPQQRQQQ
QQSRQLGGGGGNNGGVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGD
AKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDR
EDSNREGGGGGGRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWR
ELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGT
RRIIVLGFQ*
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mRNA from alignment at Contig_41:234742..245485+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4417 ID=mRNA_4417|Name=jgi.p|Trimin1|349310|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10744bp|location=Sequence derived from alignment at Contig_41:234742..245485+ (Tribonema minus UTEX_B_3156 )
ATGAATGTGTTCCATGATCCCGCTCAAGCAGAAGCCCTGGTAAGTTATGC
AAGTTATGCCGCAGCAACCGCATCACGCCCTGCTGAGTGGCGGAGCTTGC
ATTGAAGCAGCCGATTATTACAACGATGGGCCAGATCGGTCTAGGCTCTA
GGTGCCAGCAGTGCAATCACATGCCCTGCGAGAGACCGTCTCTCATCCCC
GTCGTGTTTCAACTCTTCTTTCGACTGGGTCTTTGCCGCCACCGGGTACA
CGAAATTGTTGTTGCACGAGTCTGCATCGTATGTTCACTCAGATGGGCTT
CGGCAGGCACGTGCCAGTGCCGTCTGATCAGCCGCACGGCCGTGGCAAGG
CCAATTATACTCTTCTTACCACCTGTTCTTATTGTGCCGGGCAAAAACAC
GTCCGTTCAGGCTGATGCAAGTTTCCCTGGTTGACCATCACCAGTTATGT
TTTAACAGCAGTCACCTTGATCCGATCTTAGCTTTATTGCAGGAGAACCA
GCTCCATGTCAGGTGACCTTGTGAATCAACGCACGCGATGATCAACAAGT
TGATCATCCATTCTTGGTCATTCAGCACAACTCAGTGAAAATGAATTCCG
GACAACAATACTGGGATGCTCTGCATTGCTACCCTTCACATCGCTCTACA
GTGTCAGCATGGCCGCGAGCACAATGCCAGTGCTTCGTGCCAAAACGCGT
CGCCGCAGCAACTTCAAGTGCCCGTCCGAGCATCTTTTACCAACCCCAAC
CCCCCCCCCCCCGCTGTCCTCCGCTTCCGCCGCCGCAGCTCAGCATGAGC
CTCGATGACATATCAAAGGCGCGCAAAAAGGCCGACACGCCTTCGGCGTC
AAAGCCCAAGAAAGCCGCTGGCGTTGCAAACGGCGGCGCAGCAGCGGGCG
GCGGGCGCGGCAAGGCCGGCGGCGGCGGCCGCGCGAAGCGGCAGCAGCGG
CAGGCGGCGCAGGCGCCGTACCAGGTGCCGGCGGCGGCGGCGCGCGGCGG
CGGCGCGGCCAACGGGCGGGGCGGGGGCGGCGGCGGCGGCGCGGCGGCGG
CTCGGGGGAATGCGCGTGTGCGCGTGGAGAGCCTGGCGCAGACCGCGAGT
CTCGCGCAGGTGCTGGAGGCGTTTGAGTCGGTGGGGCGCGTGACGCGCGC
GGAGATACCGACGGACGCGGGCGGGCGCTCTCAGGTGAGCGACTGCGGGT
GCGGTCGGTGCGCGCGCGATGGTTCCGACTGCCGCGGCAGCCAATGCTGT
GGATTGGCACCTAGGGCTAGGGTTGGAGTTGGTGATCAGGGCGCAGCACA
AGGTGGTGCCGGCGCGCCCGCAGCTGTCCCAAATGTAGTGCGTACTGATA
CGTAGGGTCAGGGCTGGTGATGAGGGCTCAGTGGTGCCGGCGCACAAGGT
GATGTAGAGATACCAATGGACGCGGGCGGGCGGTCTCAGGTCAGTGCGCG
CGGCTGCGGCTGGCGCGCCCCGTGGCGGACATAAATGCTGCGGCAGCTGG
TGTCGCGACTAATGCGTATCAAGGGTCAGGGGTTACGGTTCGTGATCGGC
GCTAAAGGCGGGGCGGTCTTAGGTGATGGCGGCTGCGGCCGGCCCCCTGC
CTGCGGCTGCTGCTGATGGCGCACGCCTGATGTACCAGCTTCGCGCCAAT
GCGTCAACATGCGTGCAGCGCTCACCCCGTGCCCGCTTGGTGTACGGGCG
CGATCGTCAACACCGCCTGCATGTGTAAATTGCAAACTCAGCAGGGCATT
GCGGCCCACACTCAGGGGCCAATGGCCTACAGTTAGAGATTCCCACGTTG
CAGGAAGTATTCTTGTACGCCGGCGCGCTTCGAGTGCGAAGCGTCGCTGA
CTGACGGGCTCAATATGGAATGATGTGCTGTGCCTCCGTTGATGCATGCA
GGGATACGGGTGAGTGGATGACGCAGGAACACGCTGGAATGACAGGAACG
TTCTGCTGGAGTTTGCGGCCACGCGCCCACCAATCACACTTGCAATCACC
TGAGGAAAGCCTAGGCGCAGGCTTACAGACATGATTGAGCTGGACGGCAA
CGGGGCGCCCCTGCATTCGCGTGCCATTTGCGTGCGATGGGTGGGTATGG
AAACAGATCAGGGCGCAATGCACGCCACAGTGAAAAAAGGCAGGTATTTT
GTGATGGTACTGGCAGCGCAATAACTGCTGTAACCGCCAGCAGGTGACGG
CAAGCATGGAACGGCTGCACCTGCCACATCATGTTCAAAACAGCTCTGGT
AGGATTTGCTGACAGATGTTGACAGGCAGCTTTGCCATATGAAGTATGAT
AGGTTCGACTCCACAAGTTGAAGTTATGTTACTTGAAAGGAACTGCAAGC
TACGCTACACATGCACAGGAGATGTCACGAAACGTACCATTCATACTTTG
TCAAGCACTGGGCACTGGGCATGATAAACTCTTGCACAGTTTCAGCGGAT
GGATGCACCGGCAGCATCGTCATGACAACTGCTGTTCGGACGACCCTAAG
CCAACCCTAAGGCTGCCAATACCACTCGATAGTACGTTAGATGCTTGTTT
TCGAGCTCAGGTTCATTGATTTTGCCTGTGGTGCCCGCATCCAGGCAGCA
CTCAACACGAATGTTGAATCCTACTACAAAGGGCGACCACCTGATGACGA
TTTGGATAGCGTGTGTCCGCGAACACCAGTTGAAGTTGAAGTTGTAGTCG
TCGCTAATCTTCAAGTTTTGGTTCTGTGCGCACTGCACTTCAGCACATGC
CCCGGAAACATGCTACAGTCTGCTCGCCTCTGAACCCGACGTCACTCCTG
TTCTTAGTGTTAGGGTTAGAAGTTAGGGTTAGGGCTCGCTCCACAGCAGT
GCTGGGTTCATGGCCCTCCGGCCAGTGATAGCTCACGCTACCGGACCCCG
GCATCTGCTGAAACTATGCCTTCAACTGCATGACGCTCATGCGCGCGGCA
GTGGTGGGCCGTCTGACGGCTAGCCCCCTCGACAGTCGACGCCAGTTCCC
TCACAAGCCCCATGCGCAGCTTTGATCCGGGTTAGGGTCAGGGTGTAGGG
TCAGGGTTAGGGTTAAGCCGCTCGACCTATACTACCCGCATATGGTGTCG
CTATCCCTGCCCGCTGCTTTGAGCGGCGGCTCACATGCGCAGTCCGCTGG
ACCCCATCTAACCCCGAGTGCCATAACCCTAGTTATCGTCCGATCGTCCC
ACCCCTGCACACAGCTTGTGGACAGCGCTGTCCTGCCCGCAGGCCATACG
CGGTTACTTACTCATGCGTGCATTGCCGCCGCTGGGCCTCATCTAACCCT
AGTGCCGTAACCCTAGTTGCCGTCCAATTGACCCCCTGCGTGCAGCTTTG
TGGAGGACTGCGCTGCGCTGCTTCCGCGCGATACGCGGCGACGCCCATTC
GCGCATCGCCGCCCCTATGCTCAATCTCATCCTTGTTCCGTAACCCCAGC
TGCCGTCCGATTGACACCCCTCCCTTGCACGCAGCTTCGTCGAGTTCTTG
GACCCAGACGACGCCGTGGTCGCGGCGCGCACCATGTCCGGCACGATCAT
CGCCAACCGCAAGATCATCGTGTCGATGGCGCCGCAGCCGAAGGGGGGGG
CGGGGGGCGGGGGGGCGGCGCCGCCCGCCGCCGACACAGCGCTGGTGTAC
GTCGGCAACTTGGCTAACGACACCGAGGTACGGCGTGGATTTTGTCGCCA
AGTAGTGCTATGGAGTGTGCGGTGGTGGCGGATTGTTTGTTGGGCACATG
AGTGGGTTTGCTGGATCTCAGTATGAGGGTAGGTATGCCAGATCTCGGTA
TTCCTCGTGGGCGCACGCACGCGCATCGGTGGGGGTTGGGGCGGGGGGCG
CGGGGGGGGGCAGGGGAGGGTGCCACATGTCAGCCAATCTATCAGGTGCA
TACGATGGCAGCGTGACCAATGACGCTCGACCACGGCTACTGGAAAGGTT
GACCTTGCCCGACAATGGTATGCACCAGCAGCGCATCTTGTCTTTTGGTA
CAACGACGGCATCAGACGGGATTGTATGCATGCCTGTGTAGCAGCCCAGG
CCAGTAGCTGCAAGTACTCCAGGCAAGGGCGGGGGGGGGGGGGAGTAAGA
TAATCCCATACGTTCGGTCGCGGCTTGCAACTGTGCACGCGTGTCGGGGG
CGGCACTGAGGCGCTGTCTTTACGCGCAACGCGCGCTGCAGCGTCTGGGA
TCAGCTGAGCGTAGCTGCGCCGGAGCCGCGCCGCAGCTCGAGCGCGTCAC
GTGCCCTCGCCATCAGAGCTGCGTGTGCATTATGGTGCAGTATTGCATTG
AGTACAGTGCGAGACCGACTTCAACTTCAACTATAAATGCACACTCACCC
CTTGATCTGCGCAAGCGTGCACTGTACGCATGCTTCGTAGCGCGTGCGCG
CGCGGCTTTTCCTCCGCTGCTGTCGCTCTTTTCTACGCGCTTTTGCGGTG
GTGGTCACTGATGTCATGGTTCCGTACTGCGCCTTCATCCTCAAACTGCC
TGAATGTGAGAGCAAACACCGAAATGAATGAATCAGTTCCAGAGCGCGCC
CTCCGCGTGTGACCTTCTGAGGGGTAGGGTTAGGGTTAGGGTTGGGATTA
GAAACTGGAGCTTAAGCGGCGCATGCAGAGCGCGGGGCGCGTTGTGAATG
CCTCCTCGTGTTTGCTTAGGTTAAGGTTGACCCTACCTTCACCCCGCCGT
CGCTCTTCTCCACGCACATATGTTGGGCCCGTGTCCGTCAGGTTGGAGTT
CCATTCTCATGATGGCTTCATCCCTGACATCACCTTTACGTGTGAGCAAA
CATCGCATCATTTTCTGAAGCTCGCTCCGCATCTGATCATCCCATCAGGA
ACTGGAGCTCAAGCGGCACATGCAGAGCGCGGGGCGCGTTGTAAACGTCA
ACATGGTAACCGACGCTGCCGGACGGTCCAGGGGGTACGCCATTGTGCAA
TTCGGCCGGCCGAATGAGGTGAGCGCTTGCCGCCCGCGTATGCTTAAAGA
GCATACTTCAGAAGTACTTGAAGTCATACTTGAAGTCCAACGGGTACGCC
ATCGTGCAGTTCGGCCGGCCGAACGAGGTGAGCGCTTGCCGCCTGCGTGT
GCTTAAAGAGCATACTTGAAGTCATACTTGAGGTATGCCTCGAATGCAAA
AAAGCTTGCACACAGAAGTCTTTCGACTACTGTGGATGCGGTGGCACTGA
TTGACTCGTGGCCAGTGACTGCAGCAGCGGCGACCACAGTCATTGGTGGA
AGGCACTTGCGGCTCACCATATCTTGTCACGTAGAGCTCTACAATCTTTA
GATACGTTTCCATTCAATCGTCTGATGCGCTCAACTCATGCGCTGTGGTC
ACCATGTATGTACTCCTCAAAGTGAATTGGATTGTGGTCTGTATACTGGC
AAGTGTAACCGTTGCAACCGTCAAAGCGTGCAAAACGGCAATGAGCATGT
AGCTTTCATATGCTCCAACACCCGCCCTGAGGTCTGAGCTCACATTCAAA
GGCACTTGCGGCCAATCATTCCTTGTCACCTAGAGCGCTTCGATCTTTTG
ATTCTTTTCATTCGTCTGACACGCTGTGGTCACCGTGTATGCGCACGCAG
GCGCGCAAGGCTATACAGACCCTGCACGGCTCGTCGCTCCTGGGGCGCAA
GCTCATAGTGCACGAGGACAGGGACACGGGCAAGGGCGCGGCGTCGCAGC
AGGCGCCGCAGCAGCGCCAGCAGCAGCAGCAGTCCCGCCAACGTGAGCAC
CCTCGGCGCAGCGCCGCTGTCGCAGTTGTGCATGGCAGGCTGGCGTGTGC
GTGACTGGAGCCTGACCCTAACCGTAACCCTACCCTTGAGAGTTCATCAA
CATCGTCACGAGTGCTTGCGGGCGGCATGACAGGCTGACTGGAGCAGTAG
AGAGATCATCAGTAGCATCGTCGCGTGCGCTCGGGGGCGGCGCTGCAAGG
TCGGAGCGCTGTCACGGCGCCGCGCCGCTGGCCTGTGCGCCAGCAGCAGC
AGCAGCCCCGCCGACGCAAGCGCGCCGCGGCGCAGCGCTGCTGCCGCAGT
TCGCATGGCAGGCTGGTGCGCGCGTGACTGGAGCAGTTGAGAGATCGCTA
CTGTGGCATCGCAGCGTGCGCTGACGGCGGCAGCCGCACCACGGCCAAGT
GGTGTTAGTTGTGCGCGCCTGCCCGGTCACCGACTCCTGAAACTGCCAAG
GGGCGACAGCGCTCTGACTGCCGTCTCCTTACATACATACCAGCACTCGC
GCACCTCCGTCTCCACGCGCCGCCTGTCACTGGCACAGTGCTATCAGCTG
TGTCATACGTATGGTGTCAAATGACTTGAAGCTTCCTCATGCAGCAGAAA
CACCTGCCTGTCATGCCTCGTAATAGGCCCGCTCTCTGACTGTTCCGTTT
GCTCTCTGCTGCGGGCATAGCGCATCATGCGTACGGTGACAAACGCCCCG
AAGCTTCCCGACGCGGCAGCGGCGCCTGCCTGTGACGCCTCGACGCCGGC
CCGCTCTGACTGTTGCATTTATTCGGCTGTGTGGCCGCTGCTGCGCAATC
GGCACGGGTGGCGGCGCCTGCTGTGCCTCATAATCGGTCCGCTCTGAATG
TAACGTTTATTGTGCCGTGGTCGGCCGCTGCTCATGTTTATTCTGCTGTG
GTGGCCGCTGCGCAGTCGGCGGGGGGGGCGGCAACAACGGCGGCGTCGTG
CCGCGCGAGGGGCTCGCGTCGCCGCGCGTTTTCGTCGGCAACCTCAGCTT
CGACGTCACGTGGCAGGTGAGCACTGCTGCCGAGTCGCATGTAGGCAGGT
ACATAGCCACTTGGCAACTGCTGCGGCAGTGTCGTGTCGCTGGGGTGGGG
TTAAAACAGAAAATAACTAGGGGCTCGCGTTGCTGCACATTTTCGTCAGC
AACCTCAACTTCAACGTCACGTGGCAGGTGAGAGCATCGCTTCGGGGCCG
CATGTAACTTGGCAACTGCTGCACCAGTGTCATATTGCTGGAGCGGCGCA
GGCGTCCTAACCCTAGCCCTAGCCCTCACCCTTGGGTTAGGGTTAATCCA
GACAACCAAAGGGGGGCTGGCATTGCTGCGCGTCTTTGTTGGCAACGTCA
GCTTTGACGTCACATGGCAGGTGAGCGCATTGCTGCAGAGCCGCATGCAT
AGGCAGGTAGGGGGCTACTTCAAAGCTGGGGAGTGCTGCGGCAGTGTCGT
GTTGCTGGAGCGGCGTAGGCGTCCTAATCCTAGCCCTAGCCCTAGCCCTA
ACCCTCACCCTAACCCTACACCTTTTTGCTTAGACGCGGCATGAGCTGAG
TCACTGTGGCGAGCGACCATACATGTATTGTGATGCACTGCATAGGTGGA
AGTGCGAAATATCAACAGCAAGAGAGTACACAGCCTAAATGTGTACTTCA
GAGCACGTACATGCCTGCAGGCGGAAGTGCTCAATATCAACAGAGAGAGT
GCAGTAGACAGCGTGACTATGCACTTCAAAGTACGTGCATGCCTGCATAC
GCTCAGTTGTGCATGCTACATGTGCACAAGCGCCGGCGCCATGGACAACG
ACCGCTGGTCCGGTGATTGCGCCTCCCCCTCATGCGCGCTCTCTCCCGCA
TGCTGGCGCTGTTTCAGGTGCTCAAAGACCACATGCGGCAGGCTACCCCT
AACCCTAAGTACTCCCTACCCTAATTCGCCATGCAATACTTACCTACCCC
TAGCTTGATCATGCACGCAGGAACTGTACCTTAGGAGATGCACGGAACGC
TAAACTGGTCTCCCTAAAATTCGGCGCTGTTGCAGGTGCTCAAGGACCAC
ATGCGGCAGGCGGGCGATGCCAAGCACGTGTACATCATGGAGAGGGACGG
CCGCTCCGCAGGGTACGTACGCCGTCGCACTTCTATGATACATACCCATG
CCTCGCACTGCAGGATATGTATGTCGCCACATTTCACTGATACATACCCA
TGCCTCGCTCCGTAGGGTATGCACGTATTGCCGCCGCACTTTTTGATGCA
TCCCCATGCCTCGCTTGCAGGTATGTACGTATGCCGCCGCACTTCTCTGA
TACATACCTATACCTCGCTCCGCAGGGTACGTACACCGTCGCACTTCTCG
TCTCTGATATATACCCATACCTCTGAATTGCGCTGGTGAAGCCGCCCTTG
CCATATGGAAGCAACCTTGTCAATGTGTACGGCTTCAAAGTCTGCGCAAG
CACTTCACTCACATGAAGGCCTGCTCCCGATTTGCTTAGGTGTGCGCATT
TGATGTCTAGAATGAAGTCTGGTATGTGTGTATAATGACTGCTCTGGGGG
TATGTATGCAGTCGCCAAGCTCTGGTACCGCAACTACCCATACCCTGCGT
TGCTGTCGACGAGCTCACAAGACTGTGCTGGAAGACAGTGGCCAGCGCGG
CGTCGCTTGCGGAAGCACCTTCATCTCAACCCTCACCTTGCACTGTGCGT
GCCGGCTGCTGTGTTGGATGTTCGTTGCAATGCATTTGATGTCATCTAGA
TCGGACAGAGTGCGTACATTGTAGTACTCCACTGATTTTCCTTGTGAGCG
GCAGCAACCCTAGTCCTACCCCTAACCCTAACCTATTATTAACCCTAACC
CTGAGAAGTGTGCTCACAGACGACATGCACATCAACGCCTCTCGCACGCG
CGGCAGGTGCGCGATGGTGACATATGGCACCGAGGCGGAGGCGGAGCGCG
CCATCAACCCTAGCCTTAACCCTAACCCTAACCCTAACCTATTCCCAATG
CCAATCCCAAGGAGTGTGCTCACAGAATCACAAACGCCACGCGCACATGT
TCACCTCGCACGCCCACGCGGCAGGTGCACGATAGTGATGCACGGCAGCA
ACTCTAACCCCAACTCTAACATAACCCTAACCCTAACTCCTACTCTTCAC
CCTAAGCCTAAGGAGTGCGGCATGCACGTGTTCGTCTCGATCGCGCGTCA
GGTGTGCAATTGTGATTTACGCAGCAACCCCAAACCCAAACCTTAACCGC
CTTGACTGTACCCCTGACATTAACCTATTCTCAATGCTGACTGTAACCCT
GACCTACTCTTAACCCTATCCCAAAGGAGTGCACATCTACGCCTCTCGCA
CGCGCGGCAGGTGCGCGATAGTGACGTACGGCAGCGAGGCGGAAGCGGAG
CGCGCCATCGTGCAGCTGCACGACACGGAGCTGCGCGGGCGGCTCATATA
CGTGCGCGAGGACCGCGAGGACAGCAACAGAGAGGGGGGCGGCGGCGGGG
GTCGGGGGCGCGCGCGTGATGACGGCATGGACAACTCCATGATCGTGGAC
ACGGGCCGCGACGCCGAGGCGCGCTCGGTGAGGCCTATAAAGTGCATCGT
TGGGTATTGATTTCCAGTCGGGCTTAATTAGTACGCCCGGGCGCGGGGGG
GGGGGGGACGCCTGGGACAACACAATGGGCAGCTGCTCATAACATCGCTG
AGCTCTTTATTTGCAGCCCCCATCAAGTTGAAGTTTCACATGATTGCTGG
AGACAGCTGCCGCCACGCCATCTGTCTATCATCTCACACCACGCGTTGCC
GCCGTGCACTGCTGCCGCGTTGCATGCGCGCAGGTTATCGCGACCAACAT
TGACAGGGACATCACATGCTGGCTGCTGTTCCTCATAACATTGCTGAGCA
CAACGATGCTCTTCTTTGCCCCATCAAATTGAAGTTTCACTGGTGGCAGC
AATTGCATCGTTGTCCGTCTAACACCTCACCCCACCCGACGCACGCGCGC
GCAGGTTATCGTGACCAACATTGACAGGGACATCACGTGGCGCGAGCTCA
AGGTGAGAGAGAACGAGATGGAGGGGAAGGGTGCATATCATGCATTGGTT
AGGCGGCAGTGTCTTGCAAGTATTTTCCAGTGACTACGCCGATAACTGAT
CAGATCAGGCCGACAGTGTGTGATCATGCTAAGGCCATTGGGGGAATGAT
GAGGCTGCAGCACATACAATGTCAGAGCTGTAGCAGTATGGCGCAGCGTT
AACAGCTGCAAAAGTGGCTGACAGTGTCTTGCGAGCTCAAGGTGAGAGAG
AACGAAGTGCAGATATCGTGCGTCAGTTGGTCGGCAGTGTCTTGCAAGAT
ATCTGCAGTGCTGATTTCGAAACTAGGTGCAGTGCCTCAGATGAGCCTGC
TGCTCGTCGGCAGTGCGTCTGAACATTTTCAGGTTAGTTGAAGTTGGCTT
ACTTCGAATTAGGCGAGAAGAAGGGGCGCAGACAGCTGCGGCTGCGGTGC
CGAGTGATATTCGCCATTATGCATCGGTCGTGAAGCCGCTCGTGGTAGGT
GGGGACGATATCAGAGCGGTCTGCCCCCAGCAGCAAGCTGCTCTTATAGC
AACCAGATCCGTGTTCAGCCGTCAGACCGCTATTTTACTGTGACCGCTCT
TACATCGAGTGCTCTGAGCTCTACGATCGGTTGAATCGTTTTCTTGAACA
TAGTAGCCGTCAGTCCACCCTCCCTCCTCCCCCCCCCCCCCCCCCCCCCC
CACACACACACACACACGACAGAGGTCCATCAGCATCACTCCAGCATGCA
CTGCCCCCCCCCCCCCCCCACAGGACCACTTCAGCGCGGTCGGCAAAGTG
CAGTTCGTGGAGATCCCCGATACGGATGGCAACCCGCACGCGATCGTGCG
CTACGCCGACGAGAGGTCCGCTGGCGCCGCCATCGCACGCCTCAGCAGGA
CGACGCTCGGCACGCGCCGCATCATCGTCCTCGGCTTTCAGTGA
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Coding sequence (CDS) from alignment at Contig_41:234742..245485+

>mRNA_4417 ID=mRNA_4417|Name=jgi.p|Trimin1|349310|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1530bp|location=Sequence derived from alignment at Contig_41:234742..245485+ (Tribonema minus UTEX_B_3156 )
ATGAATGTGTTCCATGATCCCGCTCAAGCAGAAGCCCTGCTCAGCATGAG
CCTCGATGACATATCAAAGGCGCGCAAAAAGGCCGACACGCCTTCGGCGT
CAAAGCCCAAGAAAGCCGCTGGCGTTGCAAACGGCGGCGCAGCAGCGGGC
GGCGGGCGCGGCAAGGCCGGCGGCGGCGGCCGCGCGAAGCGGCAGCAGCG
GCAGGCGGCGCAGGCGCCGTACCAGGTGCCGGCGGCGGCGGCGCGCGGCG
GCGGCGCGGCCAACGGGCGGGGCGGGGGCGGCGGCGGCGGCGCGGCGGCG
GCTCGGGGGAATGCGCGTGTGCGCGTGGAGAGCCTGGCGCAGACCGCGAG
TCTCGCGCAGGTGCTGGAGGCGTTTGAGTCGGTGGGGCGCGTGACGCGCG
CGGAGATACCGACGGACGCGGGCGGGCGCTCTCAGGGATACGGCTTCGTC
GAGTTCTTGGACCCAGACGACGCCGTGGTCGCGGCGCGCACCATGTCCGG
CACGATCATCGCCAACCGCAAGATCATCGTGTCGATGGCGCCGCAGCCGA
AGGGGGGGGCGGGGGGCGGGGGGGCGGCGCCGCCCGCCGCCGACACAGCG
CTGGTGTACGTCGGCAACTTGGCTAACGACACCGAGGAACTGGAGCTCAA
GCGGCACATGCAGAGCGCGGGGCGCGTTGTAAACGTCAACATGGTAACCG
ACGCTGCCGGACGGTCCAGGGGGTACGCCATTGTGCAATTCGGCCGGCCG
AATGAGTTCGGCCGGCCGAACGAGGCGCGCAAGGCTATACAGACCCTGCA
CGGCTCGTCGCTCCTGGGGCGCAAGCTCATAGTGCACGAGGACAGGGACA
CGGGCAAGGGCGCGGCGTCGCAGCAGGCGCCGCAGCAGCGCCAGCAGCAG
CAGCAGTCCCGCCAACTCGGCGGGGGGGGCGGCAACAACGGCGGCGTCGT
GCCGCGCGAGGGGCTCGCGTCGCCGCGCGTTTTCGTCGGCAACCTCAGCT
TCGACGTCACGTGGCAGGTGCTCAAGGACCACATGCGGCAGGCGGGCGAT
GCCAAGCACGTGTACATCATGGAGAGGGACGGCCGCTCCGCAGGGTGCGC
GATAGTGACGTACGGCAGCGAGGCGGAAGCGGAGCGCGCCATCGTGCAGC
TGCACGACACGGAGCTGCGCGGGCGGCTCATATACGTGCGCGAGGACCGC
GAGGACAGCAACAGAGAGGGGGGCGGCGGCGGGGGTCGGGGGCGCGCGCG
TGATGACGGCATGGACAACTCCATGATCGTGGACACGGGCCGCGACGCCG
AGGCGCGCTCGGTTATCGTGACCAACATTGACAGGGACATCACGTGGCGC
GAGCTCAAGGACCACTTCAGCGCGGTCGGCAAAGTGCAGTTCGTGGAGAT
CCCCGATACGGATGGCAACCCGCACGCGATCGTGCGCTACGCCGACGAGA
GGTCCGCTGGCGCCGCCATCGCACGCCTCAGCAGGACGACGCTCGGCACG
CGCCGCATCATCGTCCTCGGCTTTCAGTGA
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