mRNA_4385 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349291
Unique NamemRNA_4385
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA)

HSP 1 Score: 786 bits (2029), Expect = 1.030e-278
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 1 
Query:    1 MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY 1827
            MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY
Sbjct:    1 MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY 609
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 6.830e-68
Identity = 152/362 (41.99%), Postives = 196/362 (54.14%), Query Frame = 1 
Query:   16 DIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQ---TYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGP-HSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDD--RFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIE 1083
            D++ I  LQ+AE+LV+T+ RAF+ D  VLV+DTLIREKY+KDKD+DLG+RL LQPKQVR+ LA L  EG A +E M DE   GR +NYWY+D RHAVNVI LR + M+  L + + A+ A Q   TY CP+C   F V++I KL NG R FCCSHCC  D H  C +G  ++L DF++++ L +VT  + +L EQL  S  P   R  +++LV                                                                  L D  VPSNLPS+LR RG+GG  RG   +S  ARF+DD       A  AA  +G  G   S+R V +LY +N  G EVVVEIE
Sbjct:    3 DMNAIVALQKAERLVATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVH----------------------------------------------------------------SLRDTVVPSNLPSQLRQRGMGGQQRGDV-SSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIE 299
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S3Y5E8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E8_HETAK)

HSP 1 Score: 150 bits (378), Expect = 4.210e-37
Identity = 92/203 (45.32%), Postives = 121/203 (59.61%), Query Frame = 1 
Query:   49 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARG--PHS--LRDFDNRERLATVTRALRELKEQLSASAAPGCARA-GVYDLV 642
            E+L  TVVRAF+DD+ V+V+D LIR + ++D   DLG   GL PKQVR  + RL+ E L   E+  D+ + GR + YW+V+YR  V  +  R +  Q+ L+  ER E  RQTY C  C   F +LE+Q+L NG RGFCCSHCC  DTH  C R   P S  L++    +      RALR L+ QLSA+   G  R  GV DL+
Sbjct:   10 ERLAGTVVRAFYDDELVMVMDMLIRHRQIRDA--DLGVVTGLAPKQVRKAVQRLQAEKLCDFEKASDD-AQGRASVYWFVNYRRLVLAVTWRCHRAQQVLEARERKEQERQTYVCEACALQFTLLEVQRLANGGRGFCCSHCCPYDTHAGCGRDGRPTSFPLKEVAAGDGAERARRALRRLRRQLSAAPGGGAWRPDGVLDLL 209
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: D8LCF1_ECTSI (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF1_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.720e-33
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 1 
Query:   16 DIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQ 381
            D++ I  LQ+AE+LVST+ RAF+ D  VLV+DTLIREKY+KDKD++LG+RL LQPKQVR+ LA L  EG A +E M DE   GR +NYWY+D RHAVNVI LR + M+  L + + A+ A Q
Sbjct:    3 DMNAIVALQKAERLVSTIARAFYTDITVLVVDTLIREKYIKDKDEELGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQ 124
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S0CBM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBM9_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.340e-30
Identity = 88/211 (41.71%), Postives = 123/211 (58.29%), Query Frame = 1 
Query:   46 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKAN-YWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTH----ETCARGPHSLRDFDNRERLATVTRALRELKEQL-SASAAPGCARAGVYDLV 642
            AE L++ VVRAF++DDAV +ID L+R+KYL+D  DD+G RL L  K+VRA L  LE E L + E + D  +GG +A  YWY+D+ HAVNVIRLR YL++++ KEAE   L+   Y CP      C   +   E Q+LV+   G F C  C  + TH    E      ++L   DN++ L      +R ++ QL S +      R G+YDL+
Sbjct:    8 AEALIAAVVRAFYEDDAVSLIDVLLRDKYLRD--DDMGPRLSLPVKKVRATLQHLELEHLVKFELVDDLSTGGSQATKYWYIDFNHAVNVIRLRIYLLEKKQKEAEIRALSSSMYLCPGYKTKACNGRYTETEAQQLVHPETGLFLCQEC--LQTHCNNPEPPPMSTYTLELIDNKKDLTAAQNNMRRVRVQLGSKTVGAQQLRVGIYDLL 214
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A6S9HML8_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S9HML8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.550e-29
Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 1 
Query:   46 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGG-RKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTHETCARGP----HSLRDFDNRERLATVTRALRELKEQLSASAAPGCA-RAGVYDLV 642
            AE L++TV RAF+DDDAV +ID L+R+K+L+D  DD+G RL L P+Q+R  L  L+ E L + E + D  SGG +   +WY+DY HAVNVIRLR YL++++L+EAE    +   Y CP      C   +   E Q++V+   G F C  C  + THE+    P    ++L+  DN   L      +R +  QLSA        RAG+YDL+
Sbjct:    8 AEALIATVARAFYDDDAVCLIDVLLRDKFLRD--DDMGPRLSLPPRQLRRTLQFLQEEHLVKYEHVDDLSSGGSQNTKFWYIDYNHAVNVIRLRVYLLKKKLEEAELRARSSSMYLCPGYKTKACNGRYTETEAQQVVDHECGLFLCPEC--VTTHESNPDPPPKSTYTLQLLDNTRDLRLAMDNMRRVNVQLSAKMIGNHQLRAGIYDLL 214
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH)

HSP 1 Score: 126 bits (317), Expect = 8.660e-28
Identity = 73/188 (38.83%), Postives = 115/188 (61.17%), Query Frame = 1 
Query:   37 LQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYW---YVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPH-SLRDFDNRERLATVTRALRELKEQ 588
            L  AE+L++T+ RAF+ DD V+V+D L+REKYL D+  ++G RL +  K VR V+ +LE E L + E++      G  A++W   YVDY+  VN++R R +LMQ+RL + E +EL+   Y CP C   F  L+  KL++    F CSHCC  +   T    P+ +L + DNR +++++    +++ EQ
Sbjct:   10 LDLAEQLIATIARAFYPDDVVVVLDALVREKYLIDR--EIGPRLKMSEKDVRKVINQLETEMLIKAEDV----PLGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQ 191
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A1V9Z9T9_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z9T9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.290e-27
Identity = 73/185 (39.46%), Postives = 111/185 (60.00%), Query Frame = 1 
Query:   49 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGR-KANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQ--CGATFGVLEIQKLVN-GARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQL 591
            EKLV  + RAF+ D+ ++V++ L+RE++LKD  D++G  + LQ KQVR +   LE+E +  +EE+ D+  GG  KA YWY+DY+H VNV+R R Y++   LKE+E+ E+ RQT+ C    CG  +  LE Q L++ G   F C HC               L + DN E+L T+   L+++  Q+
Sbjct:    6 EKLVRLIARAFYSDEHIVVLEALLRERFLKD--DEMGNAVNLQTKQVRKICHDLEKEDMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCSNDDCGREYTALEAQLLLSPGVFEFLCGHC------------NSKLVECDNNEKLQTIKGLLQKVSPQI 176
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S2EVF6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVF6_TRICV)

HSP 1 Score: 117 bits (294), Expect = 5.250e-26
Identity = 80/211 (37.91%), Postives = 119/211 (56.40%), Query Frame = 1 
Query:   46 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKAN-YWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTHETCARGP----HSLRDFDNRERLATVTRALRELKEQLSASAAPGCA-RAGVYDLV 642
            AE L++ V RAF++D+AV +ID LIR+K+L+D  DD+G RL L  KQ+R  L  L+ E L + E + D  SGG +A  +WY+DY HAVNVIRLR YL++R+L+++E    +   Y CP      C   +   E Q++++   G F C  C  ++ H      P    ++L+  DN + L      +R +  QL A        R G+YDL+
Sbjct:   19 AEALIAAVARAFYEDEAVCLIDVLIRDKFLRD--DDMGPRLSLPAKQLRRTLQFLQEEQLVKFELVDDLSSGGSQATKFWYIDYNHAVNVIRLRIYLLKRKLEQSELRARSSSMYLCPGYKTKACNGRYTETEAQQVIDMETGLFLCQEC--VNAHAANPDPPPKSTYTLQLLDNTKDLRLAMDNMRRVNVQLCAKMMGNSQLRPGIYDLL 225
[Close]
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL)

HSP 1 Score: 122 bits (306), Expect = 6.650e-26
Identity = 76/202 (37.62%), Postives = 121/202 (59.90%), Query Frame = 1 
Query:   49 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKA-NYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQ--CGATFGVLEIQKLVN-GARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLV 642
            EKLV+ + RAF+ D+ V+V+  LIREK+LKD  D++G  + LQ +QVR ++  L ++ L  +E + D+  GG  + +YWY+DY++ V V++ R Y+MQ  LKE E+ E+ RQTY C    CG  +  LE+Q+L+  G   F C HC E+            L + DN +RL  +    R+LK+Q++  A     R G+++++
Sbjct:   18 EKLVNLIGRAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHCNEV------------LLECDNNDRLEKIQALDRKLKDQMNRQAG---MREGIFEVL 202
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC40_9STRA1.030e-278100.00TFIIE alpha subunit-domain-containing protein n=1 ... [more]
A0A6H5LCE2_9PHAE6.830e-6841.99HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S3Y5E8_HETAK4.210e-3745.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LCF1_ECTSI1.720e-3358.20HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S0CBM9_9STRA7.340e-3041.71Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6S9HML8_9STRA3.550e-2941.23Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
A0A482S8Q7_9ARCH8.660e-2838.83HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A1V9Z9T9_9STRA7.290e-2739.46HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S2EVF6_TRICV5.250e-2637.91Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A8K1C2Y0_PYTOL6.650e-2637.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:30564..37502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349291|estExt_Genemark1.C_Ctg_410004
BRITEko00000,ko00001,ko01000,ko01001,ko03021,ko03036
KEGG Pathwayko03022,ko04016,ko04110,ko04111,ko04113,ko04114,ko05169,ko05203,ko05418,map03022,map04016,map04110,map04111,map04113,map04114,map05169,map05203,map05418
KEGG koko:K03136,ko:K06636,ko:K20607
EC2.7.12.2
GOsGO:0000428,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0000993,GO:0001076,GO:0001098,GO:0001099,GO:0001112,GO:0001113,GO:0001120,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005673,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009301,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016073,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0034367,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042795,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097550,GO:0097659,GO:0098781,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:2000112,GO:2001141
Preferred nameGTF2E1
Descriptiontranscription initiation from RNA polymerase II promoter
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1675@1|root,KOG2593@2759|Eukaryota
Evalue3.25e-27
Seed ortholog112098.XP_008609430.1
Hectar predicted targeting categoryother localisation
TranscriptId349613
TrackFilteredModels1
ProteinId349291
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349291gene_4385Tribonema minus UTEX_B_3156 geneContig_41 30564..37502 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349291Trimin1|349291|estExt_Genemark1.C_Ctg_410004Tribonema minus UTEX_B_3156 polypeptideContig_41 30804..37502 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4385_10exon_4385_10Tribonema minus UTEX_B_3156 exonContig_41 30564..30816 -
exon_4385_9exon_4385_9Tribonema minus UTEX_B_3156 exonContig_41 31058..31201 -
exon_4385_8exon_4385_8Tribonema minus UTEX_B_3156 exonContig_41 31230..31917 -
exon_4385_7exon_4385_7Tribonema minus UTEX_B_3156 exonContig_41 33182..33326 -
exon_4385_6exon_4385_6Tribonema minus UTEX_B_3156 exonContig_41 33818..33859 -
exon_4385_5exon_4385_5Tribonema minus UTEX_B_3156 exonContig_41 34192..34224 -
exon_4385_4exon_4385_4Tribonema minus UTEX_B_3156 exonContig_41 34423..34467 -
exon_4385_3exon_4385_3Tribonema minus UTEX_B_3156 exonContig_41 34594..34665 -
exon_4385_2exon_4385_2Tribonema minus UTEX_B_3156 exonContig_41 34958..35419 -
exon_4385_1exon_4385_1Tribonema minus UTEX_B_3156 exonContig_41 37317..37502 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4385UTR3_4385Tribonema minus UTEX_B_3156 three_prime_UTRContig_41 30564..30803 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4385CDS_4385Tribonema minus UTEX_B_3156 CDSContig_41 37317..37502 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4385 ID=mRNA_4385|Name=jgi.p|Trimin1|349291|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2070bp|location=Sequence derived from alignment at Contig_41:30564..37502- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCACTCAACAAGACATTGATCAAATACACATCCTGCAGCAAGCGGA
GAAGCTTGTGAGCACGGTGGTGAGGGCTTTCTTCGATGACGACGCGGTGC
TGGTGATTGACACTCTGATCAGGGAGAAGTACTTGAAGGACAAGGATGAC
GATCTGGGGGCGAGGCTGGGGCTGCAGCCAAAGCAGGTGCGAGCGGTGCT
CGCGCGCCTCGAGCGCGAGGGCCTCGCGCGCCAGGAGGAGATGCTCGACG
AGTTCTCGGGCGGGCGCAAGGCCAACTACTGGTACGTCGACTACCGCCAC
GCCGTCAACGTCATCCGCCTGCGCACGTACCTCATGCAGCGGCGCCTGAA
GGAGGCGGAGCGCGCGGAGCTCGCGCGCCAGACGTACGCGTGCCCGCAGT
GCGGCGCGACCTTCGGCGTGCTCGAGATCCAGAAGCTCGTCAACGGCGCG
CGCGGCTTCTGCTGCTCGCACTGCTGCGAGATGGACACGCACGAGACGTG
CGCGCGCGGCCCGCACTCGCTGCGCGACTTCGACAACCGCGAGCGCCTCG
CGACGGTCACGCGCGCGCTGCGCGAGCTCAAGGAGCAGCTCAGCGCGAGC
GCCGCGCCGGGGTGCGCGCGCGCGGGCGTGTACGACCTCGTCAAGGAGCT
CAAGGAGCAGCTGAGCGCGAGCGCCGCGCCGGGGTGCGCGCGCGCGGGCG
TGTACGACCTCGTCAAGGAGAGCAGGGGGTGCGCGCGCGCGGGCGTGTAC
GACCTCGTCAAGGAGAGCAAGGGCTGCGTGTACGACCTCGTCAAGGAGGC
GGTGCGCGCACGCGCGGGTGTGTACGACCTCGTCAAGCAGTTACACGACA
AGCCTGTGCCCAGCAACCTGCCGAGCGAGCTGCGCGCACGTGGTGTCGGC
GGCGGCGCGCGTGGGTCGCACGGAGCGTCCAAGCTCGCGCGCTTCCGCGA
TGACCGCTTCTCGCTGCACGCCGGCTATGCCGCCGGCACCAAGGGCGGCG
ACGGCGCGCACGGCAGCAACCGCGCCGTCGACCTCCTCTACGCGCGCAAC
GCCGCGGGCTACGAGGTGGTCGTGGAGATTGAGAGCGACAGCGACGCCGA
CGACGACGGCGCCGCCGCCGCCGCAGGCCTCTCGAGCCGCCGCGCCGCCA
AGCGCAAGGCCGATGCCGCCGCCGCCGCCGCGCGCAACGCCAAGAAGGCG
GCGCTGCCGACGTTCCTCAAGGGCAGCCGCATCAGCGCGGCGGATGGCGG
CGGCGACGGCGGCGGCGGCGCCGATGCGGCGAGCGCCACAGAGGCTGCGG
CGGCGGCCGCGGCGGCGGCGCCGGCGGATGACGAGGAGCAGCGGCGCGCA
CTGTACCACGCGGAGCTCGTACGGCAGCAGGCGAGGCTCGGCGCGGAGAA
CGGCGGCAGCGGCGGCGGCGTGCAGCCAGCGGCGGCGGCGGCGGCGGCAG
CGGCGGCAGCAGCGATCGCCGAGGGCACCACGGACACGGAGGAGGATATC
GATTGGGAGGCGGCGGCAGACGGCGATACGGCGGCGACGGGCAGCGGCGC
GGGCGACGTGAAGTTGCCGCCGCCACGCTCGGGCGTCACCTTTGAAGTGG
ACGGCGCGCACGTGCCGCTGGAGTGGCTCACGGCGGAGCACATCGGCGCC
ATGGGCGCGGACCAGTACCGGCGCGATGATATGGCGGTCCGCGGCAGCGG
CGGCGGCGGCGGCGGCAGCGGCAGCAGCGGCAGCGGCAGCGGCGGTGGCG
GCGGCGGTCCGTGGCGGTCGCGGCACAGGCGGCGGCAGCGGTGGCGGCGC
GACAACGCTGGTGGCAAAGCGTGCTACTAGGCGCAGCAGCCACTCGTCGC
GGCCTTCGCGAGGCCTTATGTGAGTTCACCTTACCGTTGTCATGTATGGG
TGTAGTAGGGCCAGCCAGCAGCGCAGGATGACACACGGCAGATAGTGCAG
TGGCGCGAATGGCGCTAACAAACCCGCGGCTTGGAGCTACGGCTCGCGCT
CGTTGTAGACTTGATGTTCACTTGGTGCTGCGTGGTGGAGTACATGACCG
TTTATCAATATATTTCGCGC
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protein sequence of jgi.p|Trimin1|349291

>Trimin1|349291|estExt_Genemark1.C_Ctg_410004 ID=Trimin1|349291|estExt_Genemark1.C_Ctg_410004|Name=jgi.p|Trimin1|349291|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=610bp
MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDD
DLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRH
AVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGA
RGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSAS
AAPGCARAGVYDLVKELKEQLSASAAPGCARAGVYDLVKESRGCARAGVY
DLVKESKGCVYDLVKEAVRARAGVYDLVKQLHDKPVPSNLPSELRARGVG
GGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARN
AAGYEVVVEIESDSDADDDGAAAAAGLSSRRAAKRKADAAAAAARNAKKA
ALPTFLKGSRISAADGGGDGGGGADAASATEAAAAAAAAAPADDEEQRRA
LYHAELVRQQARLGAENGGSGGGVQPAAAAAAAAAAAAIAEGTTDTEEDI
DWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGA
MGADQYRRDDMAVRGSGGGGGGSGSSGSGSGGGGGGPWRSRHRRRQRWRR
DNAGGKACY*
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mRNA from alignment at Contig_41:30564..37502-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4385 ID=mRNA_4385|Name=jgi.p|Trimin1|349291|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6939bp|location=Sequence derived from alignment at Contig_41:30564..37502- (Tribonema minus UTEX_B_3156 )
ATGAGCACTCAACAAGACATTGATCAAATACACATCCTGCAGCAAGCGGA
GAAGCTTGTGAGCACGGTGGTGAGGGCTTTCTTCGATGACGACGCGGTGC
TGGTGATTGACACTCTGATCAGGGAGAAGTACTTGAAGGACAAGGATGAC
GATCTGGGGGCGAGGCTGGGGCTGCAGCCAAAGCAGGTGGGCACTGAACG
CAGCACACATGATGGTCGGCATTATGTGTTTTGCCATTTCTCAGCATCTG
TGCTTTGACAGCTTCAGATTGCTACATTAGCAACCTTCTACCCTACACCG
ATTACCCCGATTGCGCACTATGTGGTTTAAACTCGATTGCTTCAAGATGT
TGGGTACCAATAGGCAACACCACACCAACGGCTCCTGCCAGCTTTTCCTA
TATAGTTGAATACAGTGTCTTCATTACAACACACTCAAGACTTGCACATG
CTTTCAAAACAGTAATCCGCACTCAAGAGTTTGCGGGCACAAGCATCAAG
AAAGCCTTGCTTCCCCCACTTTGCCGTATACAAATTGGTCTGTCCCGCGA
TCAAAGTCATTATGGTCAGGGGAAGGAAACGGGCGCCCCCCCTGAAAGCC
TCAGACACGCAACACACACTTGCGCTTGATGGTCGGATCAATGGAAGGTT
GCTCTAGTGCAGCTGCGCTGCGGCGCGGCGCATTGAGGCTTGCTGGTACT
GTTCTAGAATGATTGTGAGCAGCAGCTCCCCAGTGCGTGACCATGGCGGT
CGGGGGTGGGCAACACGCTCTGCATCGATGAGCGCCAGCTTGATTGTTTG
CACTGTATCTAATGCGCCATGGGGTGTTTCGTCAGTTGCGGTGCAACAGC
TGCTCCACAACATGAAAAATGGCTGCTCTGAGGACACTGAGGTGGCTGCA
GCGGCAGCACCTGACGTGCGCTGTACCACTTGGCGCTGGGCGCTGCTGCA
GCAGCGCCGTGCTCAACAGGACACCAGCGCACTCAATCAGATGCTGGAAA
GCATACGGCGCTGGAAACCATACTGTAGCGAAGTACGCAGCGCTGCTGCT
GCTGTTTCTGAGGTCTCCTCTTTGCGTGCCTTTGCTGCACCAGGAGGAGC
GCGCTTGCAACTTGCAGTTCAGATTTACATTAGCGCGCGGTGTGCAGAGA
TGGACTCACTAGGCCATCCTCTGCGTCATATTGAGCAGCGACTTAGCACC
ATCAGAGCTCAACAGGCCCTGTTTCTGCACACAACTCGTTGTACGACTCG
ATGAAGACGCTACCCAGGCAGTGCATGTACCTGAAAAAACATTGTGTCCA
TAGACAAATCGAGCCTGGGGGCATTTCTACTGGAGAGACCTGCGCCTCGC
CTTCTATCGCCGCCGCCGCCGCGCGCCCTCTTTTCGGCTGCGCGCGCATT
CCGCAGTCAACGTGACAATGACACACATGACCAGACCTCGACATGACCGA
CAGGCCGTGCAACCGGTGTATGCATCCCATGGCCCGCCAGTGCAGCATGT
CACACTATCCGATGAAAGAATAATGGGCAGCGCTCAGTGCGAGAAATCAG
AGGGGCACTCCGATCAGCGCGCACACGGCGCGCAATACGCCAGTACAACG
CACACGCGGAAGTACACGCGCCAGTACCCATGACAGTGCGCACTTGCCGC
GGCGCGCCACGGCCCGTGTTTCGCCATCTGTTCTCTTGCCCCATGTGCCC
CTTCTGCCCCCCCCCCCCCCTCAACCACGGCTCAGGAGCATCTCCAAACC
CCGTCATTCCCCTTTCTGTTCTCACATCCCCCTCAGCCCCCACCCCCCCC
CCCTCCCCCTGTCCTCTCTCAGGTGCGCGTGGTTCTTGAACCCCCCTCCC
CTGCCTTCTTCTCTTCTTCTCTCACATACAGCCCCCTCCCCCCCCCTTAC
TCCTCTCCCAGGTGCACGCAGTGCTTGTGCGCCTCAACCCCCCTGCTGTC
CCTTTCTGTTCTCACATACCCCCCCCCCCCCCCCCCCCTCTCCCCCCTTT
TGACACAGAGCACACGGCTCCGAACCCCCCTGACTTTCCCGCCTCTGTTC
TCACCTACCCCCCCCCCTTTTCTCCCCTCGCAGGTGCGAGCGGTGCTCGC
GCGCCTCGAGCGCGAGGGCCTCGCGCGCCAGGAGGAGATGCTCGACGAGT
TCTCGGGCGGGCGCAAGGCCAACTACTGGTACGTCGACTACCGCCACGCC
GTCAACGTCATCCGCCTGCGCACGTACCTCATGCAGCGGCGCCTGAAGGA
GGCGGAGCGCGCGGAGCTCGCGCGCCAGACGTACGCGTGCCCGCAGTGCG
GCGCGACCTTCGGCGTGCTCGAGATCCAGAAGCTCGTCAACGGCGCGCGC
GGCTTCTGCTGCTCGCACTGCTGCGAGATGGACACGCACGAGACGTGCGC
GCGCGGCCCGCACTCGCTGCGCGACTTCGACAACCGCGAGCGCCTCGCGA
CGGTCACGCGCGCGCTGCGCGAGCTCAAGGAGCAGCTCAGCGCGAGCGCC
GCGCCGGGGTGCGCGCGCGCGGGCGTGTACGACCTCGTCAAGGAGGTGAG
TACGCGTATGCGTATGCACCGCTGCCGTCGTCGCAGTAGTAGCAATTGTG
ACAGCGTGTGAGTACAACCCCAACACGTGTACGGCTGCGCGCGGTACAGT
AGGTAAGGGCTGCGCCTAACCCTAAATCCTAACCCGAAACCCTCACCCTA
AGCGTGTACGACCTCGTCAAGGAGGTGCGTATGTATGCGCGCGCGCCGCT
TCAGTACTGAAGCAGCATCGTTGCAGCGTGCAAGTAGTATGATGTGGTAC
GGTAGTAGTAAGTACTGTCATGCGCGCGCTGCGCGAGCTCAAGGAGCAGC
TGAGCGCGAGCGCCGCGCCGGGGTGCGCGCGCGCGGGCGTGTACGACCTC
GTCAAGGAGGTATGTATGTATGCGCATGCGCGCCGCTGCGGTGTGTGAAG
CAGTGTCGTTGCTGCGCGTGAATAGTATACCGGCAGTAGTGTGTGAGAAC
TGCTTCAGAAAGTATATGGTAGTGCGATGCAGTAGAGCAGGGGGTGCGCG
CGCGCGGGCGTGTACGACCTCGTCAAGGAGGTATGTATGTATACGCGTGC
TGCAGGTGCTTGAAGTAGTATCCTGGCAGTATACAGTAGTGCGGCATAGT
AGGGGGTGGCGTGTACGACCTCGTCAAGGAGGTGCGTACACATGCACGTG
CGCGGCGCTGCAGTACCTGCAGCAGTATTGTGGCAGCATGTAAGTGTTCA
AGACATATACGGTAGTGCAGTACAGCAGAGCAAGGGCTGCGTGTACGACC
TCGTCAAGGAGGTGTGTATGTATGCACGCGCTGCCGTGCTTGAAGTAGTA
TCCTGGCAGTAGCCGTGCGCGCGGGTATGACCTCGTCAAGGAGGTGCGTA
TGTATGCATGCGCGCGCCGCTGTGCAGCAGTTGGAAGTAGTATCCTGGCA
GTATACGGTGGTGCAGTGCAATAGGGAGTACGCACGCCCGGGCGTGCACG
ACCGTGTCAAGGGGGTGCGTACCGTATGCACGCGCGATTTGAAGCAGATT
GTGGCAGCGTGTGGGTAGTATACGGGCAGTAGTAACCTGGCAGCGCGTAA
GGATTACTTCAAAAGTATACGGTAGTGCGGTACAGTAGAGCAGGCGGTGC
GCGCACGCGCGGGTGTGTACGACCTCGTCAAGCAGGTGCGTACATCAGGG
ATAGGGTTAGGGCTACCGTCCGCGATCACACGCGCTGGCAGCGCTGATGT
CGCGCGAGCTCTGCGACGCAGAGACCTGCAGTAAACCTACACGCGCTGTG
TTCAGCACCCCTCTCTTGCAGCACCCACAAGACATCGCAACGCGCTCCAC
CGCCTCTGCTCTTCAACCTTCGCCTATTTGTGACCGCAGCAACGTCCCCC
TCATGACGCTGCAGCGCCAGTGCTCGCTCGAACTTCCTCAGCCAGCACAG
GTCGCTTTGAATGCGTAAGCACGGGCGCTCATGTGCGTGCCCCCCCCCTC
CCCCCTGCCCTGTTACACGACAAGCCTGTGCCCAGCAACCTTGCAGCGCC
AATGCTCGCTAGCACCACCTTGGTCAGCGCACACATCCCGCAAAATTGTC
ACCCACGGGCGCTCACCATACATTCCCCCCCTCCGCCCCCCTCCCCCGCC
CCCCCCCCCCCCCCCTGCAACGGCAGTTACACGACAAGCCTGTGCCCAGC
AACCTGCCGAGCGAGCTGCGCGCACGTGGTGTCGGCGGCGGCGCGCGTGG
GTCGCACGGAGCGTCCAAGCTCGCGCGCTTCCGCGATGACCGCTTCTCGC
TGCACGCCGGCTATGCCGCCGGTGAGTGATGATTGCACATAAATTATTGT
GATGTGATAGGCAAAGACCAGACAATAACAAAATTATGCGATCATTGTTT
TGAAAACGTTGCCACAGAAGGGACTTGAACCCATACTCATATGACCTCGC
ACGGCGCGTCCATGCTTGCGCGCTTTCGCGACGGCCGCTTCTCGCTGCAC
GCCGGCTATGCCGCCGGTGAGTGATAAATGCGCACAATATGCAAAGACAT
CATGCAGTCACAATCTGAAAAAGTTTACCAAAGAAGGGACTTGAGCCCCT
ACTCATATGAACCGGAACCTAACACCCACCAGCACCAGGCTGTCTACCGA
TTTCACCACTTTGGCAACTGGAGTGTAAGGATTCGAACCAAACCCATGAT
GAGTGGCACACGCCTGGTACCAGTGAGCTTTATCATCAGCACTGCTATCG
ATGGTGCTGCTGTAATCTTATGCGCTCGCGGCAGAGGGTGACGGTATTGT
AGAGCGCGTGTTGCTGCTTCTCGTTGCACGCAGGCTACGCTGCCGGTGAG
TTGCGTACAGCACGCTTACTGCTAGCAGTGTTGTCGGCACCGCCAGCGCT
GGTGGTCGTCATCGTGCAGTGGCATCAGCCGTGGTGCTTGCCGCGGTTGA
CCGCTGCTCGCTGGCCGCCGGATATGCTGCCGGTACGCGGCAGGCACGGC
GGCACTCGAAACGCGCACATGCCTAAGCTATTCAGTGCGCGTCACCAGAA
CCATTGCTCCCGCGTGGGGTGTGTGTGTGACACACACATGAATGCATGCC
TTTGAGCCAGCTGCCGGTACTTGGCATGTTAACTATGCAGTGCCCCAAGC
TGTAGTGCCTGCTTCATCGGGCGCCTCTGGCGTAGGGGTATGGCACCAGG
AGTGTGTGTGTGTGGCGCTTAGCGGCGGCGGCGGCAGCGGCAGCGACATG
CGCAGCTTGCACGCTGCGGCCGCGCTTGAGTGCTTCTTGCGCCCCGCCAC
ACTACGCGGTGTGCGAGCTGTTGCCGGGAGTTTGCGCAACCACACACACC
CTGCAGGGGGGCGCAGCGGACCATAGCTGCATTACAGCGTGTGCAATATG
TATGTATACATGTATGCACACAATATGCACGACCGCGGCGTCACGAGGGG
TAAGATTCAGTTTCCCGTCAACGGCACGTTCCTCCCGCCCCGATGCTAAG
GGCGTGATGGACAAAATGAAGGCACGCGGGAGTGGAAGCTCTCGTCATCC
AACAAGCAACCCTCGCCCTTTGTTCTGCGGCGCAGGCACCAAGGGCGGCG
ACGGCGCGCACGGCAGCAACCGCGCCGTCGACCTCCTCTACGCGCGCAAC
GCCGCGGGCTACGAGGTGGTCGTGGAGATTGAGAGCGACAGCGACGCCGA
CGACGACGGCGCCGCCGCCGCCGCAGGCCTCTCGAGCCGCCGCGCCGCCA
AGCGCAAGGCCGATGCCGCCGCCGCCGCCGCGCGCAACGCCAAGAAGGCG
GCGCTGCCGACGTTCCTCAAGGGCAGCCGCATCAGCGCGGCGGATGGCGG
CGGCGACGGCGGCGGCGGCGCCGATGCGGCGAGCGCCACAGAGGCTGCGG
CGGCGGCCGCGGCGGCGGCGCCGGCGGATGACGAGGAGCAGCGGCGCGCA
CTGTACCACGCGGAGCTCGTACGGCAGCAGGCGAGGCTCGGCGCGGAGAA
CGGCGGCAGCGGCGGCGGCGTGCAGCCAGCGGCGGCGGCGGCGGCGGCAG
CGGCGGCAGCAGCGATCGCCGAGGGCACCACGGACACGGAGGAGGATATC
GATTGGGAGGCGGCGGCAGACGGCGATACGGCGGCGACGGGCAGCGGCGC
GGGCGACGTGAAGTTGCCGCCGCCACGCTCGGGCGTCACCTTTGAAGTGG
ACGGCGCGCACGTGCCGCTGGAGTGGCTCACGGCGGAGCACATCGGCGCC
ATGGGCGCGGACCAGTACCGGCGGTACTACGCGCTGACGGCAGCGGCGCA
GCGATGATATGGCGGTCCGCGGCAGCGGCGGCGGCGGCGGCGGCAGCGGC
AGCAGCGGCAGCGGCAGCGGCGGTGGCGGCGGCGGTCCGTGGCGGTCGCG
GCACAGGCGGCGGCAGCGGTGGCGGCGCGACAACGCTGGTGGCAAGTCTG
TAGCGCGCACAAGTGTGGACAGTGCCATTGGCGCGAGACAAGCACTGGCA
GCGCTGCACGCGCTGACTGCGCTGTGCAGCCATGACTCGCGTTTTGTGCC
TCCGCAGCAGCAGCTCAGCAGTCGACGGCAGCGCCAGTGGCACGTGCCTG
AAAGTCACCGCTGCAGCTGCAGCCGCAGCAGCAGTCATCGGCGCTGTACA
TTGGCCGCTGCCATTGCTGCTGGTGCAACGCTGCAGAGCGTGCTACTAGG
CGCAGCAGCCACTCGTCGCGGCCTTCGCGAGGCCTTATGTGAGTTCACCT
TACCGTTGTCATGTATGGGTGTAGTAGGGCCAGCCAGCAGCGCAGGATGA
CACACGGCAGATAGTGCAGTGGCGCGAATGGCGCTAACAAACCCGCGGCT
TGGAGCTACGGCTCGCGCTCGTTGTAGACTTGATGTTCACTTGGTGCTGC
GTGGTGGAGTACATGACCGTTTATCAATATATTTCGCGC
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Coding sequence (CDS) from alignment at Contig_41:30564..37502-

>mRNA_4385 ID=mRNA_4385|Name=jgi.p|Trimin1|349291|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1830bp|location=Sequence derived from alignment at Contig_41:30564..37502- (Tribonema minus UTEX_B_3156 )
ATGAGCACTCAACAAGACATTGATCAAATACACATCCTGCAGCAAGCGGA
GAAGCTTGTGAGCACGGTGGTGAGGGCTTTCTTCGATGACGACGCGGTGC
TGGTGATTGACACTCTGATCAGGGAGAAGTACTTGAAGGACAAGGATGAC
GATCTGGGGGCGAGGCTGGGGCTGCAGCCAAAGCAGGTGCGAGCGGTGCT
CGCGCGCCTCGAGCGCGAGGGCCTCGCGCGCCAGGAGGAGATGCTCGACG
AGTTCTCGGGCGGGCGCAAGGCCAACTACTGGTACGTCGACTACCGCCAC
GCCGTCAACGTCATCCGCCTGCGCACGTACCTCATGCAGCGGCGCCTGAA
GGAGGCGGAGCGCGCGGAGCTCGCGCGCCAGACGTACGCGTGCCCGCAGT
GCGGCGCGACCTTCGGCGTGCTCGAGATCCAGAAGCTCGTCAACGGCGCG
CGCGGCTTCTGCTGCTCGCACTGCTGCGAGATGGACACGCACGAGACGTG
CGCGCGCGGCCCGCACTCGCTGCGCGACTTCGACAACCGCGAGCGCCTCG
CGACGGTCACGCGCGCGCTGCGCGAGCTCAAGGAGCAGCTCAGCGCGAGC
GCCGCGCCGGGGTGCGCGCGCGCGGGCGTGTACGACCTCGTCAAGGAGCT
CAAGGAGCAGCTGAGCGCGAGCGCCGCGCCGGGGTGCGCGCGCGCGGGCG
TGTACGACCTCGTCAAGGAGAGCAGGGGGTGCGCGCGCGCGGGCGTGTAC
GACCTCGTCAAGGAGAGCAAGGGCTGCGTGTACGACCTCGTCAAGGAGGC
GGTGCGCGCACGCGCGGGTGTGTACGACCTCGTCAAGCAGTTACACGACA
AGCCTGTGCCCAGCAACCTGCCGAGCGAGCTGCGCGCACGTGGTGTCGGC
GGCGGCGCGCGTGGGTCGCACGGAGCGTCCAAGCTCGCGCGCTTCCGCGA
TGACCGCTTCTCGCTGCACGCCGGCTATGCCGCCGGCACCAAGGGCGGCG
ACGGCGCGCACGGCAGCAACCGCGCCGTCGACCTCCTCTACGCGCGCAAC
GCCGCGGGCTACGAGGTGGTCGTGGAGATTGAGAGCGACAGCGACGCCGA
CGACGACGGCGCCGCCGCCGCCGCAGGCCTCTCGAGCCGCCGCGCCGCCA
AGCGCAAGGCCGATGCCGCCGCCGCCGCCGCGCGCAACGCCAAGAAGGCG
GCGCTGCCGACGTTCCTCAAGGGCAGCCGCATCAGCGCGGCGGATGGCGG
CGGCGACGGCGGCGGCGGCGCCGATGCGGCGAGCGCCACAGAGGCTGCGG
CGGCGGCCGCGGCGGCGGCGCCGGCGGATGACGAGGAGCAGCGGCGCGCA
CTGTACCACGCGGAGCTCGTACGGCAGCAGGCGAGGCTCGGCGCGGAGAA
CGGCGGCAGCGGCGGCGGCGTGCAGCCAGCGGCGGCGGCGGCGGCGGCAG
CGGCGGCAGCAGCGATCGCCGAGGGCACCACGGACACGGAGGAGGATATC
GATTGGGAGGCGGCGGCAGACGGCGATACGGCGGCGACGGGCAGCGGCGC
GGGCGACGTGAAGTTGCCGCCGCCACGCTCGGGCGTCACCTTTGAAGTGG
ACGGCGCGCACGTGCCGCTGGAGTGGCTCACGGCGGAGCACATCGGCGCC
ATGGGCGCGGACCAGTACCGGCGCGATGATATGGCGGTCCGCGGCAGCGG
CGGCGGCGGCGGCGGCAGCGGCAGCAGCGGCAGCGGCAGCGGCGGTGGCG
GCGGCGGTCCGTGGCGGTCGCGGCACAGGCGGCGGCAGCGGTGGCGGCGC
GACAACGCTGGTGGCAAAGCGTGCTACTAG
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