mRNA_4289 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159836
Unique NamemRNA_4289
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835ZKI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI0_9STRA)

HSP 1 Score: 506 bits (1302), Expect = 3.750e-181
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
Query:    1 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 753
            MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF
Sbjct:    1 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 251          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A836CFE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE2_9STRA)

HSP 1 Score: 370 bits (949), Expect = 6.120e-127
Identity = 193/246 (78.46%), Postives = 200/246 (81.30%), Query Frame = 1
Query:    1 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADK 738
            MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRM+RAEGSINK+FLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEY+IAYKKFV G+ ISHVEENLLETGGFREI PKRPSPALVLDD+QGSILMSQSARNPLVNLVLK                                          EQKLIYESLGGMMSEE+F RKLHLYTLAPHSY+FVDLWADK
Sbjct:   15 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLK------------------------------------------EQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDLWADK 218          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835YZW4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.580e-66
Identity = 112/248 (45.16%), Postives = 161/248 (64.92%), Query Frame = 1
Query:   16 SKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 753
            S+YLSR+P I   +  TG GKS+    LI++M+ EG+I  +F+ISPTA+SN++Y+ I+  +DK + D+    F+ ++E+V  CEA A  YR DLEY IA  K+ SGE +++ +E LLE  GF  + PKRPS  L  DD QGS + S+ +RN   NLVL+SRH+  GLGLSI    QT+ +G P+ +RLN THW  +K+ +  E + +YE + G  S+ EF+R  + YT  PH YLF DL    + ++F
Sbjct:  148 SRYLSRIPAIVTLVGHTGSGKSYLATALIQLMQREGTITHLFIISPTANSNTLYQNIVKTDDKLYSDIGPAVFKSLEEIVASCEAIADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGFMPVVPKRPSFCLFCDDCQGSAIFSRGSRNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVFFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADLPRQLLTNTF 395          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835Z5J4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 6.430e-66
Identity = 107/234 (45.73%), Postives = 153/234 (65.38%), Query Frame = 1
Query:   31 RVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDL 726
            R+P I   +  TG GKS+    LI+MM+ EG+I  +F+ISPTA+SN++Y  +L P+DK + D+    F+ ++E+V  CEA A  YR DLEY IA  K+ SGE +++ +E LLE  G+  + PKRPS  L  DD QGS + S+ ++N   NLVL+SRH+  GLGLSI    QT+ +G P+ +RLN THW ++K+ +  E + +YE + G  S+ EF+R  + YT  PH YLF DL
Sbjct:    1 RIPAIVTLVGHTGSGKSYLATALIQMMQREGTITHLFIISPTANSNTLYSNVLKPDDKVYSDIGPAVFKSLEEIVASCEAVADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGYMPVVPKRPSFCLFCDDCQGSAIFSRGSKNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVLFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADL 234          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835YYT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT5_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.480e-65
Identity = 109/255 (42.75%), Postives = 172/255 (67.45%), Query Frame = 1
Query:    1 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDK----NAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAP-HSYLFVDLWADKIADS 750
            +P LES+YLSR+PTI   + STG GK++  ++L++++R EG+++ V+L+SPT  SN +YK+++  E K     K      ++ ++ +  + +A A ++R ++EY+IA++K  +G+T++  E NLLE  GFR+I P+RP PALV+DD QGS+L S S RN L  LVL+ RH+G G+GLSIF + QT  G P+ +R N TH  ++ TH+ +E  ++Y   GG +S EEF+R   LYT    H+++ VDL+  ++ DS
Sbjct:  129 LPALESRYLSRLPTICGFVGSTGSGKTYLCLSLLKLLRREGTLDTVYLVSPTGASNVLYKSVIR-EGKDHVFTKPNSPQIWKDLEWIEGDVQAQADRWRDEMEYDIAHRKHTAGQTLNPHETNLLERFGFRKIVPRRPCPALVIDDAQGSLLFSPSPRNYLSQLVLRCRHVGGGVGLSIFLVAQTSRGVPRSLRCNFTHLFLYSTHNAKELDVLYHESGGFVSREEFERLFRLYTATSRHAFMKVDLYERQLTDS 382          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835YP98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP98_9STRA)

HSP 1 Score: 211 bits (538), Expect = 9.600e-65
Identity = 113/251 (45.02%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   10 LESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPE-DKTWD-LDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 753
            L S+YLSRVPTI  A+  TG GK+F  + LI++MR E SI  +F+ISPTA SN+IY+AI  PE D+ +D L    F  ++++       A  Y   L Y +A+++FV GE +S  +E LLE GG+R+I  +RPS AL++DD Q S + S+   N   NLVL+SRH   GLG SIF   QT+  G P+ +R N TH+ ++KT S  E   +YE + G +S  EF+R   LYT   H YLF D+  ++++DSF
Sbjct:   18 LTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 268          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835YL54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL54_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.430e-51
Identity = 94/251 (37.45%), Postives = 156/251 (62.15%), Query Frame = 1
Query:   10 LESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWD-LDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWA-IWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 753
            L S+ +SRVP +  A+  TG GKS+  + LI+ M+ E +I ++F+ISPTA SN+IYK I+   D+ +D L    +  ++E+   C+++A  Y H+L+   AY ++ +G  + + +  LLE  G+R++ PKRP+ A+  DD   S L S S +NP  N  L+ RH G GLG S+F + QT+ +G PK +R N TH+  +  + + +E + ++E++   +S ++F+RKL L+TL  H YLF DL    +++ +
Sbjct:   18 LTSRVVSRVPCLCIAVGHTGAGKSWKIVELIKRMQMERTITRLFIISPTAASNTIYKNIVREGDRVYDDLSPKIYASLEEIESVCKSEAYVYAHELKCAAAYLRYANGLPLDYPDTQLLEQIGWRQMIPKRPAFAVFADDCSHSALFSTSRKNPWSNFCLRCRHAGNGLGDSVFMVSQTMRSGVPKALRENATHFFYVGGSMNRKEVESMWETVSSFVSFDDFERKLRLFTLENHGYLFCDLIKKTLSNRY 268          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835ZBD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD4_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.350e-47
Identity = 91/214 (42.52%), Postives = 133/214 (62.15%), Query Frame = 1
Query:  106 MMRAEGSINKVFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKI 741
            M RA+ +        PTA+SN++Y+ IL P+DK + D+  N F+ + E+V  CEA    YR DLEY IA+ K+ +GE +++ +E LLE  GF  + PKRPS  L  DD Q S + S+  RN   N VL+SRH+  GLGLS+    QT+ +G P+ +RLN TH+ ++KTHS  E   +YE + G  S+ EF+R+ + +T  P+ Y+F DL   K+
Sbjct:   43 MKRAKFTAAHTINFVPTANSNTLYQNILKPDDKIYSDIGPNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGEPVTYFDEALLEQRGFMPVVPKRPSFCLFCDDCQNSAIFSRGGRNTFPNCVLRSRHVAGGLGLSVILAAQTMRSGVPRALRLNSTHFILFKTHSRVELDEMYEEVSGFCSKGEFERQFNYFTAEPYGYMFADLIRQKV 256          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A835Z465_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z465_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.400e-43
Identity = 87/197 (44.16%), Postives = 123/197 (62.44%), Query Frame = 1
Query:   52 ALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYE 636
            A      GKS+    LI MM+ EG+I  +F+ISPTA+SN++Y  IL P+DK + D+  N F+ + E+V  CEA    YR DLEY IA+ K+ +GE +++ +E LLE  GF  + PKRPS  L  D  QGS + S+  RN   N VL+SRH+  G GLS+    QT+ +G P+ +RL+ TH+ ++ THS  E   +YE
Sbjct:  104 AALRASSGKSYLATALIAMMQREGTITHLFIISPTANSNTLYSNILKPDDKVYSDIGPNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGELVTYFDEALLEQRGFMPVVPKRPSFCLFCDACQGSAIFSRGGRNTFPNCVLRSRHVAGGQGLSVILAAQTMRSGVPRALRLDSTHFILFNTHSRVELDEMYE 300          
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Match: A0A5C7LHA9_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A5C7LHA9_9SPIR)

HSP 1 Score: 110 bits (275), Expect = 2.230e-24
Identity = 78/239 (32.64%), Postives = 128/239 (53.56%), Query Frame = 1
Query:   40 TIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQH-IQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPK-RPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLA----PHSYLFVDLWAD 735
            T+   + S G GK+     L +     GS  KV+LISPT +SN ++K +   +      D  A Q  I +++ +   DA+ +     Y+ A+ K+ + + +   EE LL +  + E +P  +PSP +++DD+  S L    A NP +NLVL+ RHI + +G S+F  VQ   +G PK +R N   + I+ T  +R  + IY+ +G + +E+ F +    YTLA    PH++L VD + D
Sbjct:  110 TLVGFVGSCGRGKTNAVYLLAKRYLDYGSFTKVYLISPTYESNMLWKQLPKLDKSDVYQDVAAAQAAIADILAKIAQDASVFEFHQLYKTAWDKWKANKELKPEEETLLNSMEYVEPQPVIQPSPLIIIDDMSNSPLFRTGASNPFINLVLRHRHINK-VGASLFVCVQNFKSGIPKVLRENFRVFCIFDTKDSRVLEGIYDEVGSITTEDAFVQN---YTLAINRNPHNFLTVDKFPD 344          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159836 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835ZKI0_9STRA3.750e-181100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFE2_9STRA6.120e-12778.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZW4_9STRA2.580e-6645.16AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z5J4_9STRA6.430e-6645.73Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YYT5_9STRA1.480e-6542.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YP98_9STRA9.600e-6545.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YL54_9STRA3.430e-5137.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBD4_9STRA1.350e-4742.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z465_9STRA1.400e-4344.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5C7LHA9_9SPIR2.230e-2432.64Uncharacterized protein n=1 Tax=Spirochaetes bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:605061..605816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159836|e_gw1.10.130.1
Hectar predicted targeting categoryother localisation
TranscriptId160158
TrackFilteredModels1
ProteinId159836
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159836gene_4289Tribonema minus UTEX_B_3156 geneContig_10 605061..605816 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4289_1exon_4289_1Tribonema minus UTEX_B_3156 exonContig_10 605061..605816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4289CDS_4289Tribonema minus UTEX_B_3156 CDSContig_10 605061..605816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159836Trimin1|159836|e_gw1.10.130.1Tribonema minus UTEX_B_3156 polypeptideContig_10 605061..605816 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4289 ID=mRNA_4289|Name=jgi.p|Trimin1|159836|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=756bp|location=Sequence derived from alignment at Contig_10:605061..605816- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCCGACTCGAGTCCAAGTATCTCAGCCGTGTGCCCACCATCTTTTG
TGCTCTCGCCAGCACCGGAGGCGGCAAGTCCTTCACCACCATCAACCTGA
TACGAATGATGAGAGCTGAGGGTTCAATCAACAAGGTGTTTCTAATCAGT
CCGACCGCCGATTCGAACTCGATCTACAAGGCGATCCTTACACCGGAGGA
CAAGACCTGGGATCTGGACAAGAATGCGTTTCAGCACATCCAGGAAGTCG
TGCAGGAGTGCGAGGCAGACGCTGCCAAATATCGCCATGACTTGGAATAC
GAGATCGCATACAAAAAGTTTGTCTCCGGGGAGACGATATCTCACGTCGA
GGAGAACCTGCTGGAGACGGGAGGGTTCAGAGAGATCAAGCCGAAACGTC
CCAGTCCCGCCCTGGTACTGGACGACATCCAGGGAAGCATACTCATGTCT
CAGTCTGCGCGCAATCCCCTCGTGAATTTAGTGCTGAAGAGTCGACATAT
CGGAGAGGGACTCGGGCTCAGCATCTTTTTCATGGTGCAGACGCTGACGG
GTTGCCCGAAGCCGATTCGACTCAATGTGACCCACTGGGCGATCTGGAAG
ACGCACTCCACGAGGGAGCAGAAGTTGATATACGAATCGCTGGGGGGCAT
GATGAGCGAAGAGGAGTTTCAACGTAAACTGCATCTCTACACGCTGGCTC
CCCACAGCTATCTATTCGTTGACTTGTGGGCCGACAAGATAGCGGATTCT
TTCTGA
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protein sequence of jgi.p|Trimin1|159836

>Trimin1|159836|e_gw1.10.130.1 ID=Trimin1|159836|e_gw1.10.130.1|Name=jgi.p|Trimin1|159836|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=252bp
MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLIS
PTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEY
EIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMS
QSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWK
THSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADS
F*
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mRNA from alignment at Contig_10:605061..605816-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4289 ID=mRNA_4289|Name=jgi.p|Trimin1|159836|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=756bp|location=Sequence derived from alignment at Contig_10:605061..605816- (Tribonema minus UTEX_B_3156 )
ATGCCCCGACTCGAGTCCAAGTATCTCAGCCGTGTGCCCACCATCTTTTG TGCTCTCGCCAGCACCGGAGGCGGCAAGTCCTTCACCACCATCAACCTGA TACGAATGATGAGAGCTGAGGGTTCAATCAACAAGGTGTTTCTAATCAGT CCGACCGCCGATTCGAACTCGATCTACAAGGCGATCCTTACACCGGAGGA CAAGACCTGGGATCTGGACAAGAATGCGTTTCAGCACATCCAGGAAGTCG TGCAGGAGTGCGAGGCAGACGCTGCCAAATATCGCCATGACTTGGAATAC GAGATCGCATACAAAAAGTTTGTCTCCGGGGAGACGATATCTCACGTCGA GGAGAACCTGCTGGAGACGGGAGGGTTCAGAGAGATCAAGCCGAAACGTC CCAGTCCCGCCCTGGTACTGGACGACATCCAGGGAAGCATACTCATGTCT CAGTCTGCGCGCAATCCCCTCGTGAATTTAGTGCTGAAGAGTCGACATAT CGGAGAGGGACTCGGGCTCAGCATCTTTTTCATGGTGCAGACGCTGACGG GTTGCCCGAAGCCGATTCGACTCAATGTGACCCACTGGGCGATCTGGAAG ACGCACTCCACGAGGGAGCAGAAGTTGATATACGAATCGCTGGGGGGCAT GATGAGCGAAGAGGAGTTTCAACGTAAACTGCATCTCTACACGCTGGCTC CCCACAGCTATCTATTCGTTGACTTGTGGGCCGACAAGATAGCGGATTCT TTCTGA
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Coding sequence (CDS) from alignment at Contig_10:605061..605816-

>mRNA_4289 ID=mRNA_4289|Name=jgi.p|Trimin1|159836|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=756bp|location=Sequence derived from alignment at Contig_10:605061..605816- (Tribonema minus UTEX_B_3156 )
ATGCCCCGACTCGAGTCCAAGTATCTCAGCCGTGTGCCCACCATCTTTTG
TGCTCTCGCCAGCACCGGAGGCGGCAAGTCCTTCACCACCATCAACCTGA
TACGAATGATGAGAGCTGAGGGTTCAATCAACAAGGTGTTTCTAATCAGT
CCGACCGCCGATTCGAACTCGATCTACAAGGCGATCCTTACACCGGAGGA
CAAGACCTGGGATCTGGACAAGAATGCGTTTCAGCACATCCAGGAAGTCG
TGCAGGAGTGCGAGGCAGACGCTGCCAAATATCGCCATGACTTGGAATAC
GAGATCGCATACAAAAAGTTTGTCTCCGGGGAGACGATATCTCACGTCGA
GGAGAACCTGCTGGAGACGGGAGGGTTCAGAGAGATCAAGCCGAAACGTC
CCAGTCCCGCCCTGGTACTGGACGACATCCAGGGAAGCATACTCATGTCT
CAGTCTGCGCGCAATCCCCTCGTGAATTTAGTGCTGAAGAGTCGACATAT
CGGAGAGGGACTCGGGCTCAGCATCTTTTTCATGGTGCAGACGCTGACGG
GTTGCCCGAAGCCGATTCGACTCAATGTGACCCACTGGGCGATCTGGAAG
ACGCACTCCACGAGGGAGCAGAAGTTGATATACGAATCGCTGGGGGGCAT
GATGAGCGAAGAGGAGTTTCAACGTAAACTGCATCTCTACACGCTGGCTC
CCCACAGCTATCTATTCGTTGACTTGTGGGCCGACAAGATAGCGGATTCT
TTCTGA
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