|
Homology
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A835ZFE6_9STRA (DOT1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFE6_9STRA) HSP 1 Score: 967 bits (2499), Expect = 0.000e+0 Identity = 848/848 (100.00%), Postives = 848/848 (100.00%), Query Frame = 1
Query: 1 MAAXXXXXXXXPDMXXXXXXXXXXXXXPRSSKDLAAAQEPGAAMLAESSHSQAEVAPVPPLAAVGAAPADRVAQSSRLHDHDAAGSGQGSTVMPGEAALSNAQQRAAGKRAASGXXXXXXXXXXXXXXXXXXXXXRARSQAAVLPQCQNHSATYDGSNAPQPVSSAVAKEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAQPKRMAAAAHLTQAVAVKHKAQRLAPSHQGVFAAAAAARRLEYAAQAALRMRISGGGSSAQEQVLGTSAKRFARGGRRGLNVRHGGSCAGGSSNGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGSGSXXXXXXXXXXXXXGVAAREMAQQTTLRIGRFKSVLDSCFQALAGSRDALELAPMIKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELIKQLRASGGAAAADALSADVEVHSAQPEAGSSTQGQGSRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDQGQXXXAXXXXXXXXXXXXXXXXXXXSVRRPRVELLTGCFTQLEERVQEATVIYFNNYAGYFDGARASQRPEHAHSSNLEAVLIDMLKRGDARRCKLNPNFNXXXXXNFNNVGATRLITLEPLETAPYAWRSNCRKLALKRRALGEFASSWRDDLDAYVYTIAPFWACRKCTLEHSEYGEFEQVCLCGTRAPSSRR 2544
MAAXXXXXXXXPDMXXXXXXXXXXXXXPRSSKDLAAAQEPGAAMLAESSHSQAEVAPVPPLAAVGAAPADRVAQSSRLHDHDAAGSGQGSTVMPGEAALSNAQQRAAGKRAASGXXXXXXXXXXXXXXXXXXXXXRARSQAAVLPQCQNHSATYDGSNAPQPVSSAVAKEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAQPKRMAAAAHLTQAVAVKHKAQRLAPSHQGVFAAAAAARRLEYAAQAALRMRISGGGSSAQEQVLGTSAKRFARGGRRGLNVRHGGSCAGGSSNGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGSGSXXXXXXXXXXXXXGVAAREMAQQTTLRIGRFKSVLDSCFQALAGSRDALELAPMIKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELIKQLRASGGAAAADALSADVEVHSAQPEAGSSTQGQGSRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDQGQXXXAXXXXXXXXXXXXXXXXXXXSVRRPRVELLTGCFTQLEERVQEATVIYFNNYAGYFDGARASQRPEHAHSSNLEAVLIDMLKRGDARRCKLNPNFNXXXXXNFNNVGATRLITLEPLETAPYAWRSNCRKLALKRRALGEFASSWRDDLDAYVYTIAPFWACRKCTLEHSEYGEFEQVCLCGTRAPSSRR
Sbjct: 1 MAAXXXXXXXXPDMXXXXXXXXXXXXXPRSSKDLAAAQEPGAAMLAESSHSQAEVAPVPPLAAVGAAPADRVAQSSRLHDHDAAGSGQGSTVMPGEAALSNAQQRAAGKRAASGXXXXXXXXXXXXXXXXXXXXXRARSQAAVLPQCQNHSATYDGSNAPQPVSSAVAKEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAQPKRMAAAAHLTQAVAVKHKAQRLAPSHQGVFAAAAAARRLEYAAQAALRMRISGGGSSAQEQVLGTSAKRFARGGRRGLNVRHGGSCAGGSSNGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGSGSXXXXXXXXXXXXXGVAAREMAQQTTLRIGRFKSVLDSCFQALAGSRDALELAPMIKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELIKQLRASGGAAAADALSADVEVHSAQPEAGSSTQGQGSRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDQGQXXXAXXXXXXXXXXXXXXXXXXXSVRRPRVELLTGCFTQLEERVQEATVIYFNNYAGYFDGARASQRPEHAHSSNLEAVLIDMLKRGDARRCKLNPNFNXXXXXNFNNVGATRLITLEPLETAPYAWRSNCRKLALKRRALGEFASSWRDDLDAYVYTIAPFWACRKCTLEHSEYGEFEQVCLCGTRAPSSRR 848
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A7S3XRF2_HETAK (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRF2_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 5.110e-10 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 1309 ALAGSRDALELAPMIKGRLDVNNRQC-----MYGGIYPMALDRIVQEIGVTSS-DVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELIKQLR 1602
A A R LE A I+G N RQ MYG I+ ++ +VQE+G+ DVF+D+GSG+GQAV QVAA TG +GIEI E+R A A E ++Q++
Sbjct: 4 AAAAGRWDLEYAAGIRG----NKRQATQDVAMYGSIFEPLVEALVQELGIQGGRDVFMDVGSGLGQAVAQVAATTGCLSVGIEIDESRAELADAFFKEYLEQVK 103
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: W7TUH3_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUH3_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.130e-6 Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1315 AGSRDALELAPMIKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELI 1590
+G +LE IKG + + MYG I + +++ GVT D FLDIGSG+G VLQ+AA TG GIE+ +R ++ L ELI
Sbjct: 363 SGGVSSLENMSAIKGVKRCDGMRTMYGAIRAPLIQEMIRFAGVTRQDRFLDIGSGLGTVVLQMAAVTGCHATGIELEASRFTISSMLSEELI 454
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: F0Y2R4_AURAN (UBR-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2R4_AURAN) HSP 1 Score: 62.8 bits (151), Expect = 4.180e-6 Identity = 40/132 (30.30%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 1249 AQQTTLRIGRFKSVLDSCFQALAGSRDALELAPMIKGRL-------DVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTG-ARCMGIEIIENRHITAAALLTELIKQLRASGGAA 1620
A+ L + F LD F +L G R+ +E ++G L R YG + P + + + + + F+D+GSG+G AVLQ A T AR +G+E++ +RH A A+ + QL + AA
Sbjct: 185 AEGAALSVAAFVRALDGAFASLGG-RERVEHGGGVRGNLAPDASVCSSGQRDAHYGAVLPNLVAHCLSRARLAAGETFVDVGSGLGAAVLQAALTTTCARAVGVEVVRSRHDAALAVRDATLAQLPPAAAAA 315
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A2R5GKP9_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKP9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.480e-6 Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 1252 QQTTLRIGRFKSVLDSCFQALAGSRDALELAPMIKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITA 1566
++T + G ++++ C GS D AP+ + + + + YG + +QE +T D F+DIGSGIGQ VLQ+A+C G +GIE++ RH TA
Sbjct: 155 ERTVMSFGGWRAL--ECSSIREGSND-FHRAPLAES-VSGHQFRAQYGRANSHLVQTCIQEAQITRKDRFIDIGSGIGQVVLQIASCVGCPSIGIELLGGRHDTA 255
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A7S3ZMX8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMX8_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 8.310e-6 Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1381 QCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTEL 1587
+ YG I A +++ E+G+T D LDIGSG+G LQ+AA G + G+E++E+R + AL EL
Sbjct: 190 RAQYGRILTGATEKVANELGITDKDTALDIGSGVGNVPLQIAATFGCKARGLELMESRAVVGTALDVEL 258
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: I1CNU1_RHIO9 (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CNU1_RHIO9) HSP 1 Score: 59.3 bits (142), Expect = 1.260e-5 Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 1387 MYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIEN 1551
+YG I+P +D +++ + S+ VF+D+G GIG VLQVAA TG + GIEI+E
Sbjct: 152 VYGEIFPSLIDEFIKKTQINSNSVFMDLGCGIGNVVLQVAAQTGCKAYGIEIMET 206
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A162PVQ7_PHYB8 (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PVQ7_PHYB8) HSP 1 Score: 58.9 bits (141), Expect = 1.700e-5 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 1387 MYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTELIKQLRA 1605
+YG I + + + + G+TSS VF+D+G GIG VLQVAA TG GIEI+E A L E ++RA
Sbjct: 111 VYGEINSILVKEFISKTGITSSSVFMDLGCGIGNVVLQVAAQTGCEAYGIEIMETPCRYAKRQLKEYASRMRA 183
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A7S3L1R3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1R3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.850e-5 Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 1
Query: 1270 IGRFKSVLDSCFQALAGSRDALELAPMIKGRLDVNNR--------QC--MYGGIYPMALDRIVQEI-GVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIENRHITAAALLTEL 1587
IG FK + C + L + +E +I+ N R QC YG I P A ++++EI V DVF+D+G GIG AVLQ A G GIE++ +R+ A TEL
Sbjct: 79 IGEFKHLWRLCEKNLGEKTEDIENGRLIR---QANTRMAAGDSKAQCKAQYGRILPNATHKLLKEILQVDKDDVFVDVGHGIGNAVLQAAYTVGCESRGIEVVGDRNFIALRFKTEL 192
BLAST of jgi.p|Trimin1|347281 vs. uniprot
Match: A0A1Y1W5Q5_9FUNG (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5Q5_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 4.900e-5 Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 1387 MYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQVAACTGARCMGIEIIE 1548
+YG I PM + ++ G+T VF+D+G GIG VLQVAA TG GIEI++
Sbjct: 146 VYGEILPMLISEFIERTGITHDSVFIDLGCGIGNVVLQVAAQTGCHASGIEIMK 199
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|347281|estExt_Genemark1.C_Ctg_100026 |
BRITE | ko00000,ko00001,ko01000,ko03036,ko04121 |
KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
KEGG Reaction | R03875,R03938,R04866,R04867 |
KEGG Pathway | ko00310,ko05165,ko05202,ko05203,map00310,map05165,map05202,map05203 |
KEGG ko | ko:K10691,ko:K11427 |
EC | 2.1.1.43,2.3.2.27 |
GOs | GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000725,GO:0001672,GO:0003674,GO:0003682,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006301,GO:0006310,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007346,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010639,GO:0010847,GO:0010948,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022414,GO:0031151,GO:0031156,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031445,GO:0031452,GO:0031491,GO:0031493,GO:0031570,GO:0031573,GO:0032259,GO:0033043,GO:0033044,GO:0033313,GO:0033554,GO:0034641,GO:0034729,GO:0034968,GO:0036211,GO:0040020,GO:0040029,GO:0042054,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043900,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044877,GO:0045786,GO:0045798,GO:0045814,GO:0045835,GO:0045892,GO:0045930,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060255,GO:0065007,GO:0065009,GO:0070911,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0099114,GO:0140096,GO:1901360,GO:1901564,GO:1902275,GO:1902679,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1905268,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2000677,GO:2001141,GO:2001251 |
Preferred name | DOT1 |
Description | Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones |
COG category | B |
Max annot lvl | 2759|Eukaryota |
EggNOG OGs | KOG1776@1|root,KOG3924@1|root,KOG1776@2759|Eukaryota,KOG3924@2759|Eukaryota |
Evalue | 6.06e-07 |
Seed ortholog | 44056.XP_009034333.1 |
Hectar predicted targeting category | other localisation |
TranscriptId | 347603 |
Track | FilteredModels1 |
ProteinId | 347281 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4236 ID=mRNA_4236|Name=jgi.p|Trimin1|347281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2779bp|location=Sequence derived from alignment at Contig_10:225278..230324+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGCCGGACATGGCAAAATC TGCTGCCACGGTGGCAGCAGCAGCGCAAAAACCGCGCTCTTCTAAGGACC TAGCAGCGGCGCAGGAACCGGGAGCCGCCATGCTCGCGGAGTCTTCGCAC AGTCAGGCAGAAGTGGCGCCTGTGCCACCATTAGCAGCGGTTGGCGCAGC ACCAGCAGACCGAGTGGCGCAGTCATCGAGGCTTCACGATCATGATGCAG CAGGCTCAGGTCAGGGCAGCACGGTGATGCCTGGAGAGGCGGCGCTCAGC AACGCTCAGCAGCGCGCAGCGGGCAAAAGGGCTGCCAGTGGCACCGGCGG CGACGGCAGTGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCGCAA AGAAGCGCGCTCGCAGCCAGGCTGCAGTGCTGCCTCAATGCCAAAATCAC AGCGCCACGTATGATGGCAGTAATGCACCACAGCCTGTTAGCAGCGCTGT AGCCAAAGAGGCATCCAGCACAGCTGCGACAGCGTCGCCAGCAGCAGCAG CAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGTCA CGGATGGCAGCGCTGAGCGACGATGACGGAAGCACGACGTGCGGCAGCAG CAGCGATGACAGCAGCATGGCTCAGCCCAAGCGCATGGCAGCAGCGGCGC ACCTGACACAGGCGGTGGCAGTCAAACACAAGGCGCAGAGGCTAGCGCCG AGTCACCAGGGCGTCTTCGCGGCAGCGGCGGCAGCACGGCGCTTGGAGTA CGCAGCGCAAGCAGCGCTGCGGATGCGCATCAGCGGCGGCGGCAGCAGCG CTCAAGAACAGGTGCTCGGCACGAGTGCCAAGCGCTTTGCGCGCGGCGGC AGACGTGGGCTTAACGTTAGGCACGGTGGCAGCTGCGCTGGCGGCAGCAG TAATGGTGTCACCAATGCTGTCAGCGCCGCCAGTGGTGGCAGCAGCAGTG CAGTCGGCGGCAGCGGCAGCTCTGCTGGCGCCGCCGTCAGTGAGTGCAGT AATAAGGCCGGCGCTGCTGACAACGGCAGCGGCGGCGGCGGCGGCGGCGG CACGACTGGTAGAAGCAGCAGCAGCAGCAGCAGTCAGAGCAGCAAGGACA GCAGCAGCGGCGGTGGCGGCGATGGCGGCAGCGGCAGCAGCAGCGGCAGC GGCAATGACGGCGGCGCCAACAGCAGCGGCGTTGCTGCGCGAGAAATGGC GCAACAGACGACGCTTCGCATTGGCAGATTTAAATCAGTGCTGGACAGTT GCTTTCAGGCGCTGGCGGGGAGCAGGGATGCGCTGGAGCTCGCACCAATG ATCAAGGGCAGGCTGGATGTCAACAACAGGCAGTGCATGTATGGAGGTAT TTACCCCATGGCGCTGGACCGGATTGTCCAGGAAATCGGCGTGACCTCTA GCGATGTGTTTCTCGACATTGGCTCCGGCATCGGACAGGCCGTGCTCCAA GTGGCTGCATGCACTGGGGCGCGGTGCATGGGCATTGAAATCATTGAGAA CCGCCACATCACCGCCGCCGCGCTACTGACGGAGCTCATTAAGCAGCTGC GCGCCAGCGGGGGCGCGGCGGCGGCGGATGCGCTGAGCGCTGATGTGGAG GTCCACAGTGCTCAGCCAGAGGCCGGCAGCAGCACTCAGGGCCAGGGCAG CAGAAGTGCTGCAGCACAGGACAGCGGAGCTCAAGCGCAGGAGAGCAGTG CTCAGGCAGAGGCCGGCAGCAGCTCTCAGGGGCAGGGCAGCAGCGCACAA CAGCAGGGCAGCAGCAGTGCTCAAGCGCAGGACAGCAGCAGCGCTCAAGA GCAGGGTGGCAGTGCTCAGACAGAGGCCGGCAGCAGCGCTCAGGCACAGG ACGGCAGCGCTCAAGCGCAAAACAGCAGCAGTGCTGAGGAACAGGGCAGC AGTGATCAGGGGCAGGGTGGCAGCGCACAAGGGCAGGGTGGCAGTGCTCA GGGCCAGGGAGGCGGTGCTCAAGCGCAGGGCGGCAGCGTTCGTCGACCGC GTGTGGAGCTGCTGACGGGGTGCTTCACGCAGCTGGAGGAGCGCGTGCAG GAGGCCACCGTCATTTACTTCAACAACTACGCGGGGTATTTTGACGGCGC GCGCGCGTCGCAACGCCCCGAGCACGCGCACAGCTCCAACCTCGAGGCAG TGCTCATCGACATGCTCAAGCGCGGCGACGCGCGCAGGTGCAAGCTCAAC CCAAACTTCAACCCAAACGTCAACTCAAACTTCAACAATGTTGGGGCCAC GCGGCTCATCACGCTGGAGCCCCTGGAGACGGCGCCCTACGCGTGGCGCA GCAACTGCCGGAAGCTGGCGCTGAAACGGCGCGCGCTAGGCGAGTTTGCG AGCAGCTGGCGCGATGATCTGGACGCTTATGTGTACACGATAGCGCCGTT CTGGGCGTGCCGCAAGTGCACGCTAGAGCACAGCGAGTACGGGGAGTTTG AGCAGGTGTGCCTGTGCGGCACGCGCGCGCCGTCGTCGCGTCGCTAACTA GCGCTGAGCCCTAGCTGTCCCTAGGGTTTGTGTCAGCTGGCGTGCTCATC GTTACATAGGGCTTGGGGGTGGCGGCAGACAGAGCAATGGTGTTCAAGAG CATAATGCTGCACTGGCTCGGAGTTTGTACGATGGTGCTGGCGTCGCAAG GCATGCATCAGATGCCTGAGCTCAGGGTGCATGCGGCTGTTGATTGGTAC ATTGTGATGATCAAGGGTGAAGGTGCGTG back to topprotein sequence of jgi.p|Trimin1|347281 >Trimin1|347281|estExt_Genemark1.C_Ctg_100026 ID=Trimin1|347281|estExt_Genemark1.C_Ctg_100026|Name=jgi.p|Trimin1|347281|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=849bp
MAAAAAAAAAAPDMAKSAATVAAAAQKPRSSKDLAAAQEPGAAMLAESSH SQAEVAPVPPLAAVGAAPADRVAQSSRLHDHDAAGSGQGSTVMPGEAALS NAQQRAAGKRAASGTGGDGSGSSGGGGSSSSSAKKRARSQAAVLPQCQNH SATYDGSNAPQPVSSAVAKEASSTAATASPAAAAAAAAAAAAAAAAAAAS RMAALSDDDGSTTCGSSSDDSSMAQPKRMAAAAHLTQAVAVKHKAQRLAP SHQGVFAAAAAARRLEYAAQAALRMRISGGGSSAQEQVLGTSAKRFARGG RRGLNVRHGGSCAGGSSNGVTNAVSAASGGSSSAVGGSGSSAGAAVSECS NKAGAADNGSGGGGGGGTTGRSSSSSSSQSSKDSSSGGGGDGGSGSSSGS GNDGGANSSGVAAREMAQQTTLRIGRFKSVLDSCFQALAGSRDALELAPM IKGRLDVNNRQCMYGGIYPMALDRIVQEIGVTSSDVFLDIGSGIGQAVLQ VAACTGARCMGIEIIENRHITAAALLTELIKQLRASGGAAAADALSADVE VHSAQPEAGSSTQGQGSRSAAAQDSGAQAQESSAQAEAGSSSQGQGSSAQ QQGSSSAQAQDSSSAQEQGGSAQTEAGSSAQAQDGSAQAQNSSSAEEQGS SDQGQGGSAQGQGGSAQGQGGGAQAQGGSVRRPRVELLTGCFTQLEERVQ EATVIYFNNYAGYFDGARASQRPEHAHSSNLEAVLIDMLKRGDARRCKLN PNFNPNVNSNFNNVGATRLITLEPLETAPYAWRSNCRKLALKRRALGEFA SSWRDDLDAYVYTIAPFWACRKCTLEHSEYGEFEQVCLCGTRAPSSRR* back to topmRNA from alignment at Contig_10:225278..230324+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4236 ID=mRNA_4236|Name=jgi.p|Trimin1|347281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5047bp|location=Sequence derived from alignment at Contig_10:225278..230324+ (Tribonema minus UTEX_B_3156 ) ATGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGCCGGACATGGCAAAATC
TGCTGCCACGGTGGCAGCAGCAGCGCAAAAACCGCGCTCTTCTAAGGACC
TAGCAGCGGCGCAGGAACCGGGAGCCGCCATGCTCGCGGAGTCTTCGCAC
AGTCAGGCAGAAGTGGCGCCTGTGCCACCATTAGCAGCGGTTGGCGCAGC
ACCAGCAGACCGAGTGGCGCAGTCATCGAGGCTTCACGATCATGATGCAG
CAGGCTCAGGTCAGGGCAGCACGGTGATGCCTGGAGAGGCGGCGCTCAGC
AACGCTCAGCAGCGCGCAGCGGGCAAAAGGGCTGCCAGTGGCACCGGCGG
CGACGGCAGTGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCGCAA
AGAAGCGCGCTCGCAGCCAGGCTGCAGTGCTGCCTCAATGCCAAAATCAC
AGCGCCACGTATGATGGCAGTAATGCACCACAGCCTGTTAGCAGCGCTGT
AGCCAAAGAGGCATCCAGCACAGCTGCGACAGCGTCGCCAGCAGCAGCAG
CAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGTCA
CGGATGGCAGCGCTGAGCGACGATGACGGAAGCACGACGTGCGGCAGCAG
CAGCGATGACAGCAGCATGGCTCAGCCCAAGCGCATGGCAGCAGCGGCGC
ACCGTAAGCCTTCCGCACACGGAGGGGGCAGCAGTGGCGATGGTGTATCA
GCCACCAATGGCTGCAGCAGCAAGAGCAGCAGCGGCGGTGGCAGCCATGG
CAGCATAATCGCGCCTGTGATCGCCAGTAATGGCCCTGCAAGCCGCTCGA
AGGCCGATGTCCAGAGGTTAGGCAGCAGCGGCTGCCATAGCAACACCGCT
GAAGCCCACACGACGATGACGCCATCGCAACGTACCAGTGACACAGGCGG
TGGCAGTCAAACACAAGGCGCAGAGGCTAGCGCCGAGTCACCAGGGCGTC
TTCGCGGCAGCGGCGGCAGCACGGCGCTTGGAGTACGCAGCGCAAGCAGC
GCTGCGGATGGTGAGGCCGCTGCTGCCGGCTCTGCGCTCAGCTCTGCATC
TGCCACCAGCCATGGCGCTCACCGCAGCAGCGGCGATGCAGCTGCTTCCA
AAGGCGCTGATGAAAGCGCCCAGCGCATCAGCGGCGGCGGCAGCAGCGCT
CAAGAACAGGTGCTCGGCACGAGTGCCAAGCGCTTTGCGCGCGGCGGCAG
ACGTGGGCTTAACGTTAGGCACGGTGGCAGCTGCGCTGGCGGCAGCAGTA
ATGGTGTCACCAATGCTGTCAGCGCCGCCAGTGGTGGCAGCAGCAGTGCA
GTCGGCGGCAGCGGCAGCTCTGCTGGCGCCGCCGTCAGTGAGTGCAGTAA
TAAGGCCGGCGCTGCTGACAACGGCAGCGGCGGCGGCGGCGGCGGCGGCA
CGACTGGTAGAAGCAGCAGCAGCAGCAGCAGTCAGAGCAGCAAGGACAGC
AGCAGCGGCGGTGGCGGCGATGGCGGCAGCGGCAGCAGCAGCGGCAGCGG
CAATGACGGCGGCGCCAACAGCAGCGGCGTTGCTGCGCGAGAAATGGCGC
AACAGACGACGCTTCGCATTGGCAGATTTAAATCAGTGCTGGACAGTTGC
TTTCAGGCGCTGGCGGGGAGCAGGGATGCGCTGGAGCTCGCACCAATGAT
CAAGGGCAGGCTGGATGTCAACAACAGGTGAAAGGGGTGAATGACTAGCG
TTGATTCATAATTGTGAACTGCCCTTAGATGGAGCTGACGCCCATGATCA
AGGGCAGACTGGACGTCAACAACAGGTGAAATGGAGTGAATAATTAGCGT
TGAATCATGATAGTGAACTGTCTTCTGGTGTCGCAGCGGCGTGTGTTTAC
AGCAGCACATGCTGTAAGTGTGCGGCCACCTACATAGCAGTTGTGTGACC
TGGAAGGTAGGTTGAAGAAACTGACAGCGTCAGAACGAATGATGCAGTTC
CTTGTTTCGAGTGACCTCGCATTTGTAGAGTCAGGGTGCCCACTTAGAGC
TATGCGCACATGCACACTGGCGCACAAGTTCAGACTGCCAGGCCAACATA
CTTCGAGGGTAGTTGCTGGCACAGTCTGCATCCTTATCAGGGTTTTGGCA
ACAGGGTTGCTGGTCCCGCATGTCAATGATTGCATCTGCGCACAAATTGA
CACCCGCGACTCACGACTCTTGAATTGCAAGCATGCAGTACCACAAGTCG
CCACGTGTTGCCTCAGGGCTGCGGACATGATGAGGCGGCGTGTCATTTGC
AGTGATGATGCTCAGCTACCTACACGGCATCCTCCCAAATCGTGTTGTGA
GCACAGCGTAACACGGCCCCATTGGTCATGAGCATTCCACCGGAGCCACC
ATCGTGTACCAACCTCACTTTGAAGTTTGGATGCATTGGGGGACTGATCT
CAAGGTGCATGGATTAAAAGTTCAGCACAGTATCAATACTCTTTCCCGTG
TGATGTATGCTCTTCTGCTGACAGGCAGTGCATGTATGGAGGTATTTACC
CCATGGCGCTGGACCGGATTGTCCAGGAAATCGGCGTGACCTCTAGCGAT
GTGTTTCTCGACATTGGCTCCGGCATCGGACAGGTGTGGAGATGGAGATG
TCATGTATCCCTACTGGTCATTGTTAATGTCATCGTTCAATCATCACTGT
ATAGGTAGTGCATTTTCATGACGCTTGTACATTTCAGGTATGACAGGGTT
GCGCTAGCTGTGGGCATAATTACCGCTGCCGCAGAGATGGAGGTGTCCTT
GTGATCACAACACGTGCTCGTAGTCTTAGGGTAGGGTTCAGGGTTAGGGT
CAGGGTTAGCAGTACATGTCCTGTGTGCGTGCGTCAGTGTGCCGAAATGG
ACAGTGATGCCAATAGGTACCTGAACTTCAGCTCAACTGCCATTCCTGAC
TTAAATGTGGCAGTTGAAGTATTTCGGTTAACGAGGCACGAGGCAAGGTT
GCAGCACGCGCGGTTGCCAGCGCCTTGTCGACTCCACATTTGTCGCTGTG
TTGCTTTGAGTAAAATTGCAGTAGTTACTGTACCCCCTTATGGTCACTGA
CCCCCTTCCCTCCCCCTCTGCTGCATTGGCATCACCAAACCAGGCCGTGC
TCCAAGTGGCTGCATGCACTGGGGCGCGGTGCATGGGCATTGAAATCATT
GAGAACCGCCACATCACCGCCGCCGCGCTACTGACGGAGCTCATTAAGCA
GCTGCGCGCCAGCGGGGGCGCGGCGGCGGCGGATGCGCTGAGCGCTGATG
TGGAGGTCCACAGTGCTCAGCCAGAGGCCGGCAGCAGCACTCAGGGCCAG
GGCAGCAGAAGTGCTGCAGCACAGGACAGCGGAGCTCAAGCGCAGGAGAG
CAGTGCTCAGGCAGAGGCCGGCAGCAGCTCTCAGGGGCAGGGCAGCAGCG
CACAACAGCAGGGCAGCAGCAGTGCTCAAGCGCAGGACAGCAGCAGCGCT
CAAGAGCAGGGTGGCAGTGCTCAGACAGAGGCCGGCAGCAGCGCTCAGGC
ACAGGACGGCAGCGCTCAAGCGCAAAACAGCAGCAGTGCTGAGGAACAGG
GCAGCAGTGATCAGGGGCAGGGTGGCAGCGCACAAGGGCAGGGTGGCAGT
GCTCAGGGCCAGGGAGGCGGTGCTCAAGCGCAGGGCGGCAGCGTTCGTCG
ACCGCGTGTGGAGCTGCTGACGGGGTGCTTCACGCAGCTGGAGGAGCGCG
TGCAGGAGGCCACCGTCATTGTGAGCGCCACTTTTTACTGCTTCCTTGCT
TAGGGCGTGTACCTCATACCTACCGTACATGTGTCTGTTTAACTGTTTGG
CATGCACGTGTGGATATCGAGCCACGGCCCAGTTGAGACAGCTGGTCCGC
GGAAGATTGAGTAGCAATCGCTAGGTAGTGAGTGTGCTCTGTGATTGTTG
TTGTCAGTTGGCGTTAAATGGTGGGCTGGGTTCCATTAGTGGGGTAAAGG
TATGTGTGTATGACGCTGCTGCAGATGACCACGAGTGCTGCATCAGATGC
CATTGTGGCCAGTGGTTCTTTGTAGGTGCCTGGGTGAGCTTTCAACAGGG
TGCATGAGACATTGCTGCTTTCTGAAAGTTACACTGAGCCTCTGCTCCAA
CACCGCTGCTACAATGTGTGTCCACTTTACTGGAAACATCTGCTAATCAC
AAGTAGAAGCAAGACAGTCACTGACTGCGCGTGCTCGCCGCGCCTGTTGC
ATGATTGCACGGCACATTGAGCATGCGCTTAGCAGCAAACCTCACTGGCT
GCCCTCGTGCTATCTCCACTTTGCATGCGAATCCCTGTCAACACGTTGAC
ATGCTTCCACGCGCTGCGCCCTCCCCATCGCAGTACTTCAACAACTACGC
GGGGTATTTTGACGGCGCGCGCGCGTCGCAACGCCCCGAGCACGCGCACA
GCTCCAACCTCGAGGCAGTGCTCATCGACATGCTCAAGCGCGGCGACGCG
CGCAGGTGCAAGCTCAACCCAAACTTCAACCCAAACGTCAACTCAAACTT
CAACAATGTTGGGGCCACGCGGCTCATCACGCTGGAGCCCCTGGAGACGG
CGCCCTACGCGTGGCGCAGCAACTGCCGGAAGCTGGCGCTGAAACGGCGC
GCGCTAGGCGAGTTTGCGAGCAGCTGGCGCGATGATCTGGACGCTTATGT
GTACACGATAGCGCCGTTCTGGGCGTGCCGCAAGTGCACGCTAGAGCACA
GCGAGTACGGGGAGTTTGAGCAGGTGTGCCTGTGCGGCACGCGCGCGCCG
TCGTCGCGTCGCTAACTAGCGCTGAGCCCTAGCTGTCCCTAGGGTTTGTG
TCAGCTGGCGTGCTCATCGTTACATAGGGCTTGGGGGTGGCGGCAGACAG
AGCAATGGTGTTCAAGAGCATAATGCTGCACTGGCTCGGAGTTTGTACGA
TGGTGCTGGCGTCGCAAGGCATGCATCAGATGCCTGAGCTCAGGGTGCAT
GCGGCTGTTGATTGGTACATTGTGATGATCAAGGGTGAAGGTGCGTG back to topCoding sequence (CDS) from alignment at Contig_10:225278..230324+ >mRNA_4236 ID=mRNA_4236|Name=jgi.p|Trimin1|347281|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2547bp|location=Sequence derived from alignment at Contig_10:225278..230324+ (Tribonema minus UTEX_B_3156 ) ATGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGCCGGACATGGCAAAATC TGCTGCCACGGTGGCAGCAGCAGCGCAAAAACCGCGCTCTTCTAAGGACC TAGCAGCGGCGCAGGAACCGGGAGCCGCCATGCTCGCGGAGTCTTCGCAC AGTCAGGCAGAAGTGGCGCCTGTGCCACCATTAGCAGCGGTTGGCGCAGC ACCAGCAGACCGAGTGGCGCAGTCATCGAGGCTTCACGATCATGATGCAG CAGGCTCAGGTCAGGGCAGCACGGTGATGCCTGGAGAGGCGGCGCTCAGC AACGCTCAGCAGCGCGCAGCGGGCAAAAGGGCTGCCAGTGGCACCGGCGG CGACGGCAGTGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCGCAA AGAAGCGCGCTCGCAGCCAGGCTGCAGTGCTGCCTCAATGCCAAAATCAC AGCGCCACGTATGATGGCAGTAATGCACCACAGCCTGTTAGCAGCGCTGT AGCCAAAGAGGCATCCAGCACAGCTGCGACAGCGTCGCCAGCAGCAGCAG CAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCGTCA CGGATGGCAGCGCTGAGCGACGATGACGGAAGCACGACGTGCGGCAGCAG CAGCGATGACAGCAGCATGGCTCAGCCCAAGCGCATGGCAGCAGCGGCGC ACCTGACACAGGCGGTGGCAGTCAAACACAAGGCGCAGAGGCTAGCGCCG AGTCACCAGGGCGTCTTCGCGGCAGCGGCGGCAGCACGGCGCTTGGAGTA CGCAGCGCAAGCAGCGCTGCGGATGCGCATCAGCGGCGGCGGCAGCAGCG CTCAAGAACAGGTGCTCGGCACGAGTGCCAAGCGCTTTGCGCGCGGCGGC AGACGTGGGCTTAACGTTAGGCACGGTGGCAGCTGCGCTGGCGGCAGCAG TAATGGTGTCACCAATGCTGTCAGCGCCGCCAGTGGTGGCAGCAGCAGTG CAGTCGGCGGCAGCGGCAGCTCTGCTGGCGCCGCCGTCAGTGAGTGCAGT AATAAGGCCGGCGCTGCTGACAACGGCAGCGGCGGCGGCGGCGGCGGCGG CACGACTGGTAGAAGCAGCAGCAGCAGCAGCAGTCAGAGCAGCAAGGACA GCAGCAGCGGCGGTGGCGGCGATGGCGGCAGCGGCAGCAGCAGCGGCAGC GGCAATGACGGCGGCGCCAACAGCAGCGGCGTTGCTGCGCGAGAAATGGC GCAACAGACGACGCTTCGCATTGGCAGATTTAAATCAGTGCTGGACAGTT GCTTTCAGGCGCTGGCGGGGAGCAGGGATGCGCTGGAGCTCGCACCAATG ATCAAGGGCAGGCTGGATGTCAACAACAGGCAGTGCATGTATGGAGGTAT TTACCCCATGGCGCTGGACCGGATTGTCCAGGAAATCGGCGTGACCTCTA GCGATGTGTTTCTCGACATTGGCTCCGGCATCGGACAGGCCGTGCTCCAA GTGGCTGCATGCACTGGGGCGCGGTGCATGGGCATTGAAATCATTGAGAA CCGCCACATCACCGCCGCCGCGCTACTGACGGAGCTCATTAAGCAGCTGC GCGCCAGCGGGGGCGCGGCGGCGGCGGATGCGCTGAGCGCTGATGTGGAG GTCCACAGTGCTCAGCCAGAGGCCGGCAGCAGCACTCAGGGCCAGGGCAG CAGAAGTGCTGCAGCACAGGACAGCGGAGCTCAAGCGCAGGAGAGCAGTG CTCAGGCAGAGGCCGGCAGCAGCTCTCAGGGGCAGGGCAGCAGCGCACAA CAGCAGGGCAGCAGCAGTGCTCAAGCGCAGGACAGCAGCAGCGCTCAAGA GCAGGGTGGCAGTGCTCAGACAGAGGCCGGCAGCAGCGCTCAGGCACAGG ACGGCAGCGCTCAAGCGCAAAACAGCAGCAGTGCTGAGGAACAGGGCAGC AGTGATCAGGGGCAGGGTGGCAGCGCACAAGGGCAGGGTGGCAGTGCTCA GGGCCAGGGAGGCGGTGCTCAAGCGCAGGGCGGCAGCGTTCGTCGACCGC GTGTGGAGCTGCTGACGGGGTGCTTCACGCAGCTGGAGGAGCGCGTGCAG GAGGCCACCGTCATTTACTTCAACAACTACGCGGGGTATTTTGACGGCGC GCGCGCGTCGCAACGCCCCGAGCACGCGCACAGCTCCAACCTCGAGGCAG TGCTCATCGACATGCTCAAGCGCGGCGACGCGCGCAGGTGCAAGCTCAAC CCAAACTTCAACCCAAACGTCAACTCAAACTTCAACAATGTTGGGGCCAC GCGGCTCATCACGCTGGAGCCCCTGGAGACGGCGCCCTACGCGTGGCGCA GCAACTGCCGGAAGCTGGCGCTGAAACGGCGCGCGCTAGGCGAGTTTGCG AGCAGCTGGCGCGATGATCTGGACGCTTATGTGTACACGATAGCGCCGTT CTGGGCGTGCCGCAAGTGCACGCTAGAGCACAGCGAGTACGGGGAGTTTG AGCAGGTGTGCCTGTGCGGCACGCGCGCGCCGTCGTCGCGTCGCTAA back to top
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