mRNA_4062 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348126
Unique NamemRNA_4062
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A835Z5I0_9STRA (ThiJ/PfpI family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I0_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 2.260e-167
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKELGGK 706
            MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKELGGK
Sbjct:    1 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKELGGK 230          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A1I4SX50_9PROT (Putative intracellular protease/amidase n=2 Tax=Nitrosomonas TaxID=914 RepID=A0A1I4SX50_9PROT)

HSP 1 Score: 338 bits (867), Expect = 2.060e-114
Identity = 161/227 (70.93%), Postives = 184/227 (81.06%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            MGKKILVV+TSVE+YP   +KR TGLWLGE VHFVKKVEEAGY+VDY+SP GGYTPIDPHSL MADDTDW WY  K FM RLG+   P++++  DY AIY+TGGHG VWDFPDN  LQA+ R IYE GGYV+SVCHGA  LLNI LSDGA L+ GK+VTGFSNEEEK V+LDKY+PFLTE EL ARGA Y+KA + W  FA+ D R+I+GQNPAS G VAE LLK +
Sbjct:    1 MGKKILVVLTSVEKYPN--LKRATGLWLGEAVHFVKKVEEAGYKVDYISPQGGYTPIDPHSLVMADDTDWAWYHKKAFMNRLGSTLKPSEINPDDYVAIYFTGGHGVVWDFPDNAALQAIGRKIYEKGGYVSSVCHGAAGLLNIKLSDGALLVKGKKVTGFSNEEEKLVELDKYVPFLTETELVARGAIYQKADEPWTAFAVEDHRLISGQNPASSGVVAELLLKAI 225          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A399WNZ5_9BACT (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Candidatus Brocadia sp. TaxID=2172549 RepID=A0A399WNZ5_9BACT)

HSP 1 Score: 332 bits (851), Expect = 5.580e-112
Identity = 158/227 (69.60%), Postives = 182/227 (80.18%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KKILVV+TS+E+YP   +KR TGLWLGE VHFVKKVE AGY+VDYVSP GGYTPIDPHSL MADDTDW WY  K FM RLGA   P++V   DY AIY+ GGHG +WDFPDN+ELQA++R IYE+GGYV+SVCHGA  LLNI +SDG  L+ GK+VTGFSNEEEK  +LDKY+PFLTE EL  RGA Y KA + WA +A+ D R+I+GQNPASG AVAE LLK L
Sbjct:    1 MRKKILVVLTSIEKYPN--LKRATGLWLGEAVHFVKKVEAAGYQVDYVSPRGGYTPIDPHSLAMADDTDWTWYQTKEFMNRLGATLKPSEVKPDDYVAIYFAGGHGVIWDFPDNEELQAISRRIYESGGYVSSVCHGAAGLLNIKMSDGTLLVKGKKVTGFSNEEEKLAELDKYVPFLTETELVNRGAIYHKADEPWAAYAVEDGRLISGQNPASGDAVAELLLKAL 225          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A7W1UEN2_9BACT (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A7W1UEN2_9BACT)

HSP 1 Score: 331 bits (849), Expect = 1.120e-111
Identity = 161/230 (70.00%), Postives = 182/230 (79.13%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKELGGK 706
            M KKILVV+TSV +YP   + R TGLWL E VHFVKKV+EAGYEVDYVSP GGYTPIDPHSL  AD TDWEWY  K FM RLG    P+QV+  DY AIY+TGGHG +WDFP+N+ELQA+++ IYE GG+V+SVCHGA  LLNI LSDG  LI GK+VTGFSNEEEK V+LDK +PFLTE EL  RGA Y+KA   WAPFAL + RVITGQNPASGGAVA+ LL  LG K
Sbjct:    1 MSKKILVVLTSVAKYPN--LNRATGLWLAEAVHFVKKVQEAGYEVDYVSPQGGYTPIDPHSLAQADATDWEWYQKKEFMNRLGTTLKPSQVNPDDYVAIYFTGGHGVIWDFPENQELQAISQKIYEKGGFVSSVCHGALGLLNIQLSDGTLLIKGKKVTGFSNEEEKLVELDKVVPFLTETELVKRGAVYKKADQPWAPFALENTRVITGQNPASGGAVADRLLTALGEK 228          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A1J0ES63_9PSED (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Pseudomonas frederiksbergensis TaxID=104087 RepID=A0A1J0ES63_9PSED)

HSP 1 Score: 331 bits (848), Expect = 1.440e-111
Identity = 157/227 (69.16%), Postives = 183/227 (80.62%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KKILVV+TSVE+YP   + R TGLWLGE VHFV KVE AGYEVDYVSP GGYTPIDPHSL MA   DWEWY +K FM RLG+   P++V+ ADY A+YY GGHG +WDFP+N ELQAL+R IYE+GG V+SVCHGA ALLNI LSDG  L+ GK VTGFSN EEK V+LDKY+PFLTEDE+ ARG  Y+KA + WAPFA++D R+ITGQNPASGGAVA+ +L  +
Sbjct:    1 MSKKILVVLTSVEKYPN--LDRATGLWLGEAVHFVHKVEAAGYEVDYVSPQGGYTPIDPHSLAMAIPIDWEWYHDKAFMTRLGSTLKPSEVNPADYVAVYYAGGHGVIWDFPENAELQALSRKIYESGGVVSSVCHGAAALLNIKLSDGTLLLKGKEVTGFSNTEEKLVELDKYVPFLTEDEMVARGGLYKKADEPWAPFAIADGRLITGQNPASGGAVADLVLAAI 225          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A532EQH5_9BACT (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532EQH5_9BACT)

HSP 1 Score: 331 bits (848), Expect = 1.590e-111
Identity = 155/227 (68.28%), Postives = 183/227 (80.62%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KKILVV+TSVE+YP   + R TGLWLGE VHFVKKVE AGY+VDYVSP GGYTPIDPHSL MA+  DWEWY  K FM RLG    P++V+ ++Y A+YY GGHG +WDFP+NK LQ ++R +YE GGYV+SVCHGA  LLNI +SDG  LI GK+VTGFSN+EEK  +LDK++PFLTE E+ ARGA Y+KA  AWAPFA++D RVITGQNPASGGAVA+ LL EL
Sbjct:    1 MNKKILVVLTSVEKYPN--LNRATGLWLGEAVHFVKKVEAAGYQVDYVSPRGGYTPIDPHSLAMAEPVDWEWYQKKEFMNRLGNTLKPSEVNPSEYVAVYYAGGHGVIWDFPENKPLQTISRKVYEGGGYVSSVCHGAAGLLNIKMSDGLPLIKGKQVTGFSNDEEKLAELDKFVPFLTETEMVARGAIYKKADKAWAPFAVADGRVITGQNPASGGAVADLLLAEL 225          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A7G2JJV5_9GAMM (Molecular chaperone Hsp31 and glyoxalase 3 n=7 Tax=cellular organisms TaxID=131567 RepID=A0A7G2JJV5_9GAMM)

HSP 1 Score: 330 bits (846), Expect = 3.100e-111
Identity = 161/230 (70.00%), Postives = 186/230 (80.87%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKELGGK 706
            M KKILVV+TS+ +YP   + R TGLWLGE VHFVKKVE AGYEV+YVSP+GGYTPIDPHSL MAD TDWEWY NK FM RLGA   P+QV+AADY AIYY GGHG +WDF DN  LQ L++SIYE+GG V+SVCHGA  LLNI L++G  LISGK+VTGFSNEEEK  +LDK +P+LTE ELK RGA Y+KA++ WA FALSD RV TGQNPASG AVA+ +L+ L GK
Sbjct:    1 MKKKILVVLTSIAKYPS--IDRATGLWLGEAVHFVKKVEAAGYEVEYVSPLGGYTPIDPHSLAMADATDWEWYQNKSFMNRLGATLKPSQVNAADYGAIYYAGGHGVIWDFLDNPALQTLSQSIYESGGVVSSVCHGAIGLLNIKLANGDYLISGKKVTGFSNEEEKLAELDKLVPYLTETELKKRGAIYQKAAEPWAEFALSDQRVATGQNPASGAAVADEVLRLLAGK 228          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A1H9DJV1_9PROT (Putative intracellular protease/amidase n=6 Tax=Nitrosomonas TaxID=914 RepID=A0A1H9DJV1_9PROT)

HSP 1 Score: 330 bits (846), Expect = 3.440e-111
Identity = 157/227 (69.16%), Postives = 185/227 (81.50%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KKILVV+TSVE+YP   +KR TGLWL E VHFVKKVEEAGYEVDYVSP GGYTPIDPHSL MADDTDW+WY +K FM RLGA   P  ++  DY AIY++GGHG +WDFPDN+ LQ+++R IYE GGYV+SVCHGA  LLNI LSDG+ L+ GK+VTGFSNEEEK  +LD+Y+PFLTE EL  RGA Y+KA++ WA FA+ D R+I+GQNPASG AVAE L+K L
Sbjct:    2 MRKKILVVLTSVEKYPN--LKRATGLWLAEAVHFVKKVEEAGYEVDYVSPAGGYTPIDPHSLAMADDTDWDWYHDKAFMNRLGATLKPIDINPDDYIAIYFSGGHGVIWDFPDNEALQSISRKIYENGGYVSSVCHGAAGLLNIKLSDGSLLVKGKKVTGFSNEEEKLAELDQYVPFLTETELINRGAVYQKATEPWAVFAVQDERLISGQNPASGAAVAELLIKTL 226          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A2T6GTL6_9PSED (Type 1 glutamine amidotransferase domain-containing protein n=33 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A2T6GTL6_9PSED)

HSP 1 Score: 330 bits (845), Expect = 3.960e-111
Identity = 158/227 (69.60%), Postives = 182/227 (80.18%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KKILVV+TSV +YP   + R TGLWLGE VHFVKKV+ AG+EVDYVSP GGY PIDPHSL MADD DW+WY +  FM+RLGA   P+QV A DY AIYY GGHG +WDFPDN ELQAL+R IYE GGYV+SVCHGA  LLNI LSDG+ LI+GK+VTGFSNEEEK  +LD Y+P+LTE EL  RGA Y+KA++ WAPFA+ D RVI+GQNPASGG VA+ LL  L
Sbjct:    1 MSKKILVVLTSVAKYPN--LNRATGLWLGEAVHFVKKVQAAGFEVDYVSPKGGYVPIDPHSLAMADDIDWQWYQDSAFMSRLGATLQPSQVQARDYVAIYYAGGHGVLWDFPDNPELQALSRDIYEQGGYVSSVCHGAVGLLNIRLSDGSLLIAGKQVTGFSNEEEKLAELDAYVPYLTETELLKRGALYQKAAEPWAPFAVQDQRVISGQNPASGGPVADLLLAHL 225          
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Match: A0A5E7R048_PSEFL (Molecular chaperone Hsp31 and glyoxalase 3 n=2 Tax=Pseudomonas TaxID=286 RepID=A0A5E7R048_PSEFL)

HSP 1 Score: 329 bits (843), Expect = 8.550e-111
Identity = 156/227 (68.72%), Postives = 186/227 (81.94%), Query Frame = 2
Query:   17 MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSPMGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIYYTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGASLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPFALSDARVITGQNPASGGAVAETLLKEL 697
            M KK+LVV+TS  +YP   + R TGLWLGE VHFV+KV++AGY+VDYVSP GGYTPIDPHSL MAD+ DW+WY +K FM RLGA   P QV+ ADY+ IYY GGHG VWDFPDN+ LQAL+RSIYE+GG V+SVCHGA  LLNI LSDG+ LI GK VTGFSN EEK  +LD+Y+P+LTEDE+  RGA Y+KA++ WAPFA++D RVITGQNPASGG VA+ +LKEL
Sbjct:    1 MSKKMLVVLTSFPKYPN--LARATGLWLGEAVHFVRKVQDAGYQVDYVSPKGGYTPIDPHSLAMADEGDWQWYQDKAFMNRLGATLKPDQVNPADYSVIYYAGGHGVVWDFPDNEALQALSRSIYESGGIVSSVCHGAVGLLNIKLSDGSLLIEGKEVTGFSNNEEKIAELDQYVPYLTEDEMVKRGAIYQKAAEPWAPFAVADRRVITGQNPASGGPVADLVLKEL 225          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348126 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5I0_9STRA2.260e-167100.00ThiJ/PfpI family protein n=1 Tax=Tribonema minus T... [more]
A0A1I4SX50_9PROT2.060e-11470.93Putative intracellular protease/amidase n=2 Tax=Ni... [more]
A0A399WNZ5_9BACT5.580e-11269.60Type 1 glutamine amidotransferase domain-containin... [more]
A0A7W1UEN2_9BACT1.120e-11170.00Type 1 glutamine amidotransferase domain-containin... [more]
A0A1J0ES63_9PSED1.440e-11169.16Type 1 glutamine amidotransferase domain-containin... [more]
A0A532EQH5_9BACT1.590e-11168.28Type 1 glutamine amidotransferase domain-containin... [more]
A0A7G2JJV5_9GAMM3.100e-11170.00Molecular chaperone Hsp31 and glyoxalase 3 n=7 Tax... [more]
A0A1H9DJV1_9PROT3.440e-11169.16Putative intracellular protease/amidase n=6 Tax=Ni... [more]
A0A2T6GTL6_9PSED3.960e-11169.60Type 1 glutamine amidotransferase domain-containin... [more]
A0A5E7R048_PSEFL8.550e-11168.72Molecular chaperone Hsp31 and glyoxalase 3 n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:205693..208511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348126|estExt_Genemark1.C_Ctg_200026
DescriptionDJ-1/PfpI family
COG categoryS
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG0693@1|root,COG0693@2|Bacteria,1MVTT@1224|Proteobacteria,1RPVK@1236|Gammaproteobacteria,1YNN3@136843|Pseudomonas fluorescens group
Evalue1.19e-113
Seed ortholog220664.PFL_2857
Hectar predicted targeting categoryother localisation
TranscriptId348448
TrackFilteredModels1
ProteinId348126
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348126gene_4062Tribonema minus UTEX_B_3156 geneContig_20 205693..208511 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348126Trimin1|348126|estExt_Genemark1.C_Ctg_200026Tribonema minus UTEX_B_3156 polypeptideContig_20 205888..208495 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4062_4exon_4062_4Tribonema minus UTEX_B_3156 exonContig_20 205693..206226 -
exon_4062_3exon_4062_3Tribonema minus UTEX_B_3156 exonContig_20 206657..206878 -
exon_4062_2exon_4062_2Tribonema minus UTEX_B_3156 exonContig_20 208127..208185 -
exon_4062_1exon_4062_1Tribonema minus UTEX_B_3156 exonContig_20 208423..208511 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4062UTR3_4062Tribonema minus UTEX_B_3156 three_prime_UTRContig_20 205693..205887 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4062CDS_4062Tribonema minus UTEX_B_3156 CDSContig_20 208423..208495 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4062UTR5_4062Tribonema minus UTEX_B_3156 five_prime_UTRContig_20 208496..208511 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4062 ID=mRNA_4062|Name=jgi.p|Trimin1|348126|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=904bp|location=Sequence derived from alignment at Contig_20:205693..208511- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAAAAACGCAAGCAAAATGGGCAAGAAGATCCTCGTCGTCGTGACATCGG
TGGAGCGGTACCCTCCTGACCTGGTCAAGAGGCCCACAGGCCTGTGGCTG
GGGGAGTGCGTGCACTTTGTAAAAAAGGTCGAGGAGGCTGGCTATGAGGT
GGACTACGTGAGCCCCATGGGCGGCTACACGCCCATCGACCCGCACAGCC
TCGAGATGGCGGACGACACGGACTGGGAGTGGTACGGCAACAAGCCCTTC
ATGGCGCGCCTCGGCGCCGTCAAGACGCCCGCGCAGGTCTCCGCCGCGGA
CTACGCGGCCATCTACTACACGGGGGGGCACGGCACCGTCTGGGACTTCC
CCGACAACAAGGAGCTGCAGGCCCTCGCGCGCTCCATCTACGAGGCGGGC
GGCTACGTCACCTCCGTCTGCCACGGCGCGTGCGCGCTGCTGAACATTGC
GCTCTCTGACGGCGCGTCCCTCATTAGCGGCAAACGCGTCACCGGCTTCT
CCAATGAAGAGGAAAAACAGGTTCAGCTCGACAAGTACATGCCCTTCCTC
ACGGAGGACGAGCTCAAAGCGCGCGGCGCAACGTACGAGAAGGCGTCTGA
CGCGTGGGCGCCCTTTGCGCTGAGCGACGCGCGCGTCATCACCGGGCAGA
ACCCCGCCTCGGGCGGCGCCGTCGCGGAGACCCTGCTCAAGGAGCTCGGG
GGGAAGTAACGTATCTAACGCCGAGAGAGGGAGGAAATGGGGGCGTGCAC
CGCTGGCTTTGCTGCTGCTGCCGCCGGTGCTGCTGCCGCCAGCGCTGTCG
GCGTGTTGAGTGTCCGGTCTGCGTAGGGGGGCAGCAGGCCTGCAAAAGAC
GAGTGCGGAGCGGAGTAGGCTTCGAGGCAGGATTTGGGGGGGGGGGGGGG
TACA
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protein sequence of jgi.p|Trimin1|348126

>Trimin1|348126|estExt_Genemark1.C_Ctg_200026 ID=Trimin1|348126|estExt_Genemark1.C_Ctg_200026|Name=jgi.p|Trimin1|348126|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MGKKILVVVTSVERYPPDLVKRPTGLWLGECVHFVKKVEEAGYEVDYVSP
MGGYTPIDPHSLEMADDTDWEWYGNKPFMARLGAVKTPAQVSAADYAAIY
YTGGHGTVWDFPDNKELQALARSIYEAGGYVTSVCHGACALLNIALSDGA
SLISGKRVTGFSNEEEKQVQLDKYMPFLTEDELKARGATYEKASDAWAPF
ALSDARVITGQNPASGGAVAETLLKELGGK*
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mRNA from alignment at Contig_20:205693..208511-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4062 ID=mRNA_4062|Name=jgi.p|Trimin1|348126|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2819bp|location=Sequence derived from alignment at Contig_20:205693..208511- (Tribonema minus UTEX_B_3156 )
AAAAAACGCAAGCAAAATGGGCAAGAAGATCCTCGTCGTCGTGACATCGG TGGAGCGGTACCCTCCTGACCTGGTCAAGAGGCCCACAGGTAAGCAAGCG CGTGACAGAGGCGCGCTGCAAAGATTCACAATTCCGAGGATCGAGGTGGT GGTGATAACCTCTACACATCCCGTCCTCTCGGCGACCTGTTGCATTTGAT GCCTCATGCGCTCATGGATCCCCACGCATGGCCCTCTTGTAGCCACGCAA GCCGTTCACGCGGCCAGAAAGTCACCACGAGGATTAAAAACGACAACTTC ATCGCACCTTGTCCCTGCGTGTGCAGGCCTGTGGCTGGGGGAGTGCGTGC ACTTTGTAAAAAAGGTCGAGGAGGCTGGCTATGAGGTAGGCCTCAAAATA CGTGATCTACTTGCTAGCTTCTGCTTTGAATTCTGGCAGCTGCGCACAAG TGGTGTCTGCTTTTTGTTCCAGATGATTGTGTGAGGTGTGTACAGCTTGA ACAGGCAATCTCTCGATACTAGTGATGGTGATTCTTGTGCTGATGCAGCG CAATGCTGCAGTGTCATTCTTTTTTCTGAAACGCCATGAAAAACCTTCAA CTGTCACAGCCCAGTAGGTAGTAAAGGGATAGTGTGAGTGAACTTACTGT CAAAAAGAGTGTTTGCACTCACGGAACAATCTCATGCACTGAATGTCTAC TGCGCCGCTGCTAAGTAGCTGTTCCGCTTGAAAAAGTGGCCACTTACAGT ATCAGCAAGCGATCTCAGTGCAGCAGCTGCCATGCGCGTAGTACCATAGT AGAAGTGCTGGGTGGCTGTCATACCGACTCTCTCTCAGTCGACGGCCATA GGTTTCTCATCACACGCGGTGCGCTACGCCAGTATCAGCAAGCGATCTCA GTGCAGCAGCTGCCATGCGCGTAGTACCATAGTAGAAGTGCTGGGTGGCT GTCATACCGACTCTCTCTCAGTCGACGGCCATAGGTTTCTCATCACACGC GGTGCGCTACGCTATACCCCCAGTGCAAGTGCAATGCTGCCACTTGCCCG CCGCAGGCCCAATGTTGAAAACCCTTTGGATGACACGTCAAAGTAGTACA GAAGATCATACGAACACACGAAAACAGAACGCATGTACAAAGATTATGCA AGGAATTGCCAAAAACCACTGCAGACTTTAAATTAATATACGACGTGCGC CGCATCACTGGACCAGTGCAAATTCTATGCTGCTGCCGCTGCAATGCTCA CGGCACCGCCAAACGCGTGTGCGCTCTGATGGCAGCAGACGCCAAGTGCA TATCCTGGCTACATCTCGGCCTCGCCATATTGGTTGCTGATCACTTCAGC GGCAGCTGCTGTCAGAGGAGCGCGGGCGCCAGGAGTCCCTTGATGTCTCT GGAGTGATGCTCCGCAAAAGCGCAGGAACGAACTGTTTCAAAGCTGTCAT GAACCTGTCGTCACGTAGATTACGCGACATCTGGGCGGGCTACATGTTCA TCGACGCGGCACAGCCCGTAACTGAAAATTACCCGTGTGAACCTGCTGTG CCGGGCTGACACACAGCCCCCAAAAATCTCACGAACCGTTTTCTCATGCG AAACTGTCACGCGACCGCCGCCGCCGCTGCCAGGTGGACTACGTGAGCCC CATGGGCGGCTACACGCCCATCGACCCGCACAGCCTCGAGATGGCGGACG ACACGGACTGGGAGTGGTACGGCAACAAGCCCTTCATGGCGCGCCTCGGC GCCGTCAAGACGCCCGCGCAGGTCTCCGCCGCGGACTACGCGGCCATCTA CTACACGGGGGGGCACGGCACCGTCTGGGACTTCCCCGACAACAAGGAGC TGCAGGTGCGCGTGCCGCTGATGTGCGCATTGCAATGCGCGGCCTGCGAG GGTTGCGGCTTGAGAACGATTGCAGCTTGGGATTGGTGTGCAGTCAGGGT TTGGGGGCTTTGCGGCCATCCGCTGCGCGTGCGGACGCGGTCTGGGACTT TCCTGACAACAAGCGGTCTGCCGCCGCTTTGCGCAGTAAGCTTGCGGCCC TTGAAGGCTAGGCCTGCGAAATACTAAAGAGGTTAGGATAGCGGTTCACA CGCTCGCGCGCTCCATCTGCGAGGCCAGTGCTGACACGACGCCCGTGTGC CATGCGCCGCTCAATGTTGCGCCGCTGCCGATTAGTTCTGCAATGCCCGT CTTTCCTGGCGCTGGCGCTGCCGCCGCGACGCGCTGCCGCCCTGCCGCTC CCTCACCGTTTTGCCGTCGCCGCCGCTGCGCGCAGGCCCTCGCGCGCTCC ATCTACGAGGCGGGCGGCTACGTCACCTCCGTCTGCCACGGCGCGTGCGC GCTGCTGAACATTGCGCTCTCTGACGGCGCGTCCCTCATTAGCGGCAAAC GCGTCACCGGCTTCTCCAATGAAGAGGAAAAACAGGTTCAGCTCGACAAG TACATGCCCTTCCTCACGGAGGACGAGCTCAAAGCGCGCGGCGCAACGTA CGAGAAGGCGTCTGACGCGTGGGCGCCCTTTGCGCTGAGCGACGCGCGCG TCATCACCGGGCAGAACCCCGCCTCGGGCGGCGCCGTCGCGGAGACCCTG CTCAAGGAGCTCGGGGGGAAGTAACGTATCTAACGCCGAGAGAGGGAGGA AATGGGGGCGTGCACCGCTGGCTTTGCTGCTGCTGCCGCCGGTGCTGCTG CCGCCAGCGCTGTCGGCGTGTTGAGTGTCCGGTCTGCGTAGGGGGGCAGC AGGCCTGCAAAAGACGAGTGCGGAGCGGAGTAGGCTTCGAGGCAGGATTT GGGGGGGGGGGGGGGTACA
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Coding sequence (CDS) from alignment at Contig_20:205693..208511-

>mRNA_4062 ID=mRNA_4062|Name=jgi.p|Trimin1|348126|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_20:205693..208511- (Tribonema minus UTEX_B_3156 )
ATGGGCAAGAAGATCCTCGTCGTCGTGACATCGGTGGAGCGGTACCCTCC
TGACCTGGTCAAGAGGCCCACAGGCCTGTGGCTGGGGGAGTGCGTGCACT
TTGTAAAAAAGGTCGAGGAGGCTGGCTATGAGGTGGACTACGTGAGCCCC
ATGGGCGGCTACACGCCCATCGACCCGCACAGCCTCGAGATGGCGGACGA
CACGGACTGGGAGTGGTACGGCAACAAGCCCTTCATGGCGCGCCTCGGCG
CCGTCAAGACGCCCGCGCAGGTCTCCGCCGCGGACTACGCGGCCATCTAC
TACACGGGGGGGCACGGCACCGTCTGGGACTTCCCCGACAACAAGGAGCT
GCAGGCCCTCGCGCGCTCCATCTACGAGGCGGGCGGCTACGTCACCTCCG
TCTGCCACGGCGCGTGCGCGCTGCTGAACATTGCGCTCTCTGACGGCGCG
TCCCTCATTAGCGGCAAACGCGTCACCGGCTTCTCCAATGAAGAGGAAAA
ACAGGTTCAGCTCGACAAGTACATGCCCTTCCTCACGGAGGACGAGCTCA
AAGCGCGCGGCGCAACGTACGAGAAGGCGTCTGACGCGTGGGCGCCCTTT
GCGCTGAGCGACGCGCGCGTCATCACCGGGCAGAACCCCGCCTCGGGCGG
CGCCGTCGCGGAGACCCTGCTCAAGGAGCTCGGGGGGAAGTAA
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