mRNA_4047 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348116
Unique Name	mRNA_4047
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348116 vs. uniprot
Match: A0A835Z5H3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H3_9STRA)

HSP 1 Score: 889 bits (2298), Expect = 0.000e+0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 1

Query:   16 MRPRVLVLLALLLHACSPAAPQESRENTALQDHDSDATTTVGDAGVYGSDAIDIQHDKQSEDTASGPQDSVHDEEEPNTPVGKAGTADAELEEDAELTVWQDAYEDEEAAVDAAHLEPQEETQHDDSFADGERPAGDDAAAELQSADDASAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQADSELVSHDAGGGATXXXXXXXXADVHGDAGAKGXXXXXXXXXXDRASAQEPQASQARTDAHTAADEPXXXXXXXXXXXXXXXXXXXXXXEIEARQQGVGGMAGAEGDAGGSCGEQEGVLRRAVAALEHALSEREEQVRGLQEGHRASLQALKDAMAQQQAAMEAERQNFVGSCQESLAHAQGDIAAQLRDAKAQXXXXXXXXXXXXXXCELAVAEARHEARLAALEEAGSAEDVDPFDPRAQGQRDGAQPVQPAAAAVAAAAGGERHTGLTFTARTLVDDACRVTAHVWVAALDAGEAVALRVWHHRGELGALGGALERGVGSLQGTWEGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDALGAAPLLRPYAPAAVKYAALALAALLVVHALLPLALLAVRVTVAALLLPFRCTWFILTCRCLRGGASAVHHNDKHKRKTQ 2115
            MRPRVLVLLALLLHACSPAAPQESRENTALQDHDSDATTTVGDAGVYGSDAIDIQHDKQSEDTASGPQDSVHDEEEPNTPVGKAGTADAELEEDAELTVWQDAYEDEEAAVDAAHLEPQEETQHDDSFADGERPAGDDAAAELQSADDASAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQADSELVSHDAGGGATXXXXXXXXADVHGDAGAKGXXXXXXXXXXDRASAQEPQASQARTDAHTAADEPXXXXXXXXXXXXXXXXXXXXXXEIEARQQGVGGMAGAEGDAGGSCGEQEGVLRRAVAALEHALSEREEQVRGLQEGHRASLQALKDAMAQQQAAMEAERQNFVGSCQESLAHAQGDIAAQLRDAKAQXXXXXXXXXXXXXXCELAVAEARHEARLAALEEAGSAEDVDPFDPRAQGQRDGAQPVQPAAAAVAAAAGGERHTGLTFTARTLVDDACRVTAHVWVAALDAGEAVALRVWHHRGELGALGGALERGVGSLQGTWEGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDALGAAPLLRPYAPAAVKYAALALAALLVVHALLPLALLAVRVTVAALLLPFRCTWFILTCRCLRGGASAVHHNDKHKRKTQ
Sbjct:    1 MRPRVLVLLALLLHACSPAAPQESRENTALQDHDSDATTTVGDAGVYGSDAIDIQHDKQSEDTASGPQDSVHDEEEPNTPVGKAGTADAELEEDAELTVWQDAYEDEEAAVDAAHLEPQEETQHDDSFADGERPAGDDAAAELQSADDASAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQADSELVSHDAGGGATXXXXXXXXADVHGDAGAKGXXXXXXXXXXDRASAQEPQASQARTDAHTAADEPXXXXXXXXXXXXXXXXXXXXXXEIEARQQGVGGMAGAEGDAGGSCGEQEGVLRRAVAALEHALSEREEQVRGLQEGHRASLQALKDAMAQQQAAMEAERQNFVGSCQESLAHAQGDIAAQLRDAKAQXXXXXXXXXXXXXXCELAVAEARHEARLAALEEAGSAEDVDPFDPRAQGQRDGAQPVQPAAAAVAAAAGGERHTGLTFTARTLVDDACRVTAHVWVAALDAGEAVALRVWHHRGELGALGGALERGVGSLQGTWEGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDALGAAPLLRPYAPAAVKYAALALAALLVVHALLPLALLAVRVTVAALLLPFRCTWFILTCRCLRGGASAVHHNDKHKRKTQ 700

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348116 vs. uniprot

BLAST of jgi.p|Trimin1|348116 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z5H3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_20	contig	Contig_20:97055..103716 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348116\|estExt_Genemark1.C_Ctg_200012
Hectar predicted targeting category	signal peptide
TranscriptId	348438
Track	FilteredModels1
ProteinId	348116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348116	gene_4047	Tribonema minus UTEX_B_3156	gene	Contig_20 97055..103716 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348116	Trimin1\|348116\|estExt_Genemark1.C_Ctg_200012	Tribonema minus UTEX_B_3156	polypeptide	Contig_20 97070..103468 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4047_1	exon_4047_1	Tribonema minus UTEX_B_3156	exon	Contig_20 97055..97302 +
exon_4047_2	exon_4047_2	Tribonema minus UTEX_B_3156	exon	Contig_20 97608..97853 +
exon_4047_3	exon_4047_3	Tribonema minus UTEX_B_3156	exon	Contig_20 98153..98780 +
exon_4047_4	exon_4047_4	Tribonema minus UTEX_B_3156	exon	Contig_20 99384..99512 +
exon_4047_5	exon_4047_5	Tribonema minus UTEX_B_3156	exon	Contig_20 100246..100347 +
exon_4047_6	exon_4047_6	Tribonema minus UTEX_B_3156	exon	Contig_20 100747..100916 +
exon_4047_7	exon_4047_7	Tribonema minus UTEX_B_3156	exon	Contig_20 101471..101645 +
exon_4047_8	exon_4047_8	Tribonema minus UTEX_B_3156	exon	Contig_20 102064..102162 +
exon_4047_9	exon_4047_9	Tribonema minus UTEX_B_3156	exon	Contig_20 102429..102658 +
exon_4047_10	exon_4047_10	Tribonema minus UTEX_B_3156	exon	Contig_20 103378..103716 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_4047	UTR5_4047	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_20 97055..97069 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4047	CDS_4047	Tribonema minus UTEX_B_3156	CDS	Contig_20 97070..97302 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4047	UTR3_4047	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_20 103469..103716 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_20:97055..103716+
coding sequence from alignment at Contig_20:97055..103716+

spliced messenger RNA

>mRNA_4047 ID=mRNA_4047|Name=jgi.p|Trimin1|348116|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2366bp|location=Sequence derived from alignment at Contig_20:97055..103716+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAGTGAGCATCAGGATGAGGCCGAGGGTGCTGGTGCTACTGGCATTGCT
ACTGCATGCTTGCTCGCCGGCAGCACCGCAGGAGTCTCGTGAGAACACTG
CACTGCAAGATCATGACAGCGACGCAACCACTACTGTGGGTGACGCCGGC
GTCTATGGAAGCGATGCCATTGACATCCAGCACGACAAGCAATCGGAGGA
TACAGCATCGGGCCCACAAGATTCAGTGCATGACGAGGAGGAGCCAAACA
CACCTGTCGGCAAGGCGGGCACAGCTGATGCCGAACTCGAAGAAGATGCA
GAGCTCACTGTCTGGCAGGACGCATATGAGGACGAGGAAGCGGCGGTTGA
TGCGGCTCATCTTGAACCACAGGAAGAAACGCAGCATGACGACTCCTTCG
CGGACGGTGAACGGCCAGCCGGCGATGACGCCGCAGCAGAGCTGCAGAGC
GCGGACGACGCGAGTGCTGGTGCAACAAGTCTTCTAAGCAACAGCGCCGC
AGCTGACGCGGAAGAAGAGGGCCACGTAATCGCGGCCGCAGCGGATGACC
TGGGAGAACGCGGAGCAGCTGCAGCAGCGGGAGGCGAGGACGGACAGCAG
GGTGACGTGAGGGCGGCAGACGCTGCTGCGGCTGCTCTTGATGCGGCAAC
AGCGGCGGGGGGGCGCGGGCAGGCGGACAGCGAACTGGTTTCTCACGACG
CAGGTGGTGGTGCAACAGCAGCGGCAGCGGCGGCAGCGGCGGCAGATGTG
CACGGCGATGCGGGTGCCAAGGGGACGCATGGCACCATTGGCGAAGTGGG
CACGGACAGAGCATCAGCGCAGGAGCCGCAAGCGAGCCAGGCGCGCACAG
ACGCACACACTGCAGCAGACGAACCAGCAGCGGCAGCAGCGGCGGCGACG
GCGGCGGAGGCGGCTGCAGCAGCGGCAGCGGCAGCAGGAGAGGAGATCGA
GGCGCGCCAGCAGGGAGTGGGGGGGATGGCAGGGGCTGAGGGGGATGCAG
GGGGCTCCTGCGGGGAGCAGGAAGGCGTGCTGCGGCGCGCCGTGGCAGCG
CTCGAGCACGCGCTGTCCGAGCGCGAGGAGCAGGTGCGCGGCCTGCAGGA
GGGGCACCGCGCGTCGCTGCAGGCGCTGAAGGACGCCATGGCGCAGCAGC
AGGCGGCCATGGAGGCGGAGCGCCAGAACTTTGTCGGCAGCTGCCAGGAG
AGCCTGGCGCACGCGCAGGGCGACATTGCGGCGCAGCTCAGGGATGCCAA
GGCTCAACTTGCGCACGCGAGGGAGGAAACCGCGGCAGTGGGGCAGGAGT
GCGAGCTCGCTGTGGCTGAGGCCCGCCATGAGGCGCGGCTCGCGGCGCTG
GAGGAAGCGGGATCCGCGGAGGACGTCGACCCATTCGATCCGCGCGCGCA
GGGGCAGCGCGATGGCGCTCAGCCGGTGCAGCCCGCGGCAGCAGCGGTGG
CGGCGGCGGCAGGAGGGGAGCGCCACACGGGACTGACGTTCACCGCCAGG
ACGCTCGTTGACGATGCGTGCAGGGTCACGGCGCACGTGTGGGTGGCAGC
GCTCGACGCCGGCGAGGCCGTCGCGCTGCGCGTGTGGCACCACAGGGGGG
AGCTGGGGGCGCTGGGGGGCGCACTCGAGCGGGGGGTTGGGTCCCTGCAG
GGGACTTGGGAGGGGGTTCACCCTGCCGTGCACGAACACGCCCAAAAGCG
CGCGGCGCCGCAGCAGCGCGCCCCGGCCGGCGCGCGCCCGGCCTGCGCTC
CTGCTTTGCCGCCGCGCAACTCGCGCGCCCGCTCCGCGCTGCGCATCCTG
CGGCCGGCGCTGCACGCGGCCCAGGCGGCGGCGCAGCGGTGGTACGCGGC
GGCATACGACGCGGCGGTTGACGCGCTGGGCGCCGCGCCGCTGCTGCGGC
CGTACGCGCCGGCAGCGGTCAAGTACGCGGCGCTCGCGCTCGCGGCGCTG
CTCGTCGTCCATGCGTTGCTGCCGCTGGCGCTGCTGGCGGTCCGCGTGAC
GGTGGCAGCGCTGCTGCTGCCGTTCAGGTGCACGTGGTTCATCCTCACAT
GCCGCTGTCTAAGAGGAGGCGCGTCGGCGGTTCACCACAACGACAAGCAC
AAGCGAAAAACACAGTGAGCAGCACACGCTCGCACAACACAGCGCGTCGC
TGGACACCGGGGCGTTCTTGCAGCTCTATGTTGATATTTATAATGCCCGC
TGCACCCTGGTGGCCAGCAACTCAAGTTCTGCTTCGGTGCTGCACGTCTT
ACGGCATGCCTTGCTCCAAAAACGTTTTCGCCTGCACACAGCGTCGTTTT
GTCCGTTAGTTGGGGCGGTGATGCATTGAAGTGGCGGTGCATTGGTTTTT
TTTTTTTTTTTTTTTT

protein sequence of jgi.p|Trimin1|348116

>Trimin1|348116|estExt_Genemark1.C_Ctg_200012 ID=Trimin1|348116|estExt_Genemark1.C_Ctg_200012|Name=jgi.p|Trimin1|348116|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=701bp
MRPRVLVLLALLLHACSPAAPQESRENTALQDHDSDATTTVGDAGVYGSD
AIDIQHDKQSEDTASGPQDSVHDEEEPNTPVGKAGTADAELEEDAELTVW
QDAYEDEEAAVDAAHLEPQEETQHDDSFADGERPAGDDAAAELQSADDAS
AGATSLLSNSAAADAEEEGHVIAAAADDLGERGAAAAAGGEDGQQGDVRA
ADAAAAALDAATAAGGRGQADSELVSHDAGGGATAAAAAAAAADVHGDAG
AKGTHGTIGEVGTDRASAQEPQASQARTDAHTAADEPAAAAAAATAAEAA
AAAAAAAGEEIEARQQGVGGMAGAEGDAGGSCGEQEGVLRRAVAALEHAL
SEREEQVRGLQEGHRASLQALKDAMAQQQAAMEAERQNFVGSCQESLAHA
QGDIAAQLRDAKAQLAHAREETAAVGQECELAVAEARHEARLAALEEAGS
AEDVDPFDPRAQGQRDGAQPVQPAAAAVAAAAGGERHTGLTFTARTLVDD
ACRVTAHVWVAALDAGEAVALRVWHHRGELGALGGALERGVGSLQGTWEG
VHPAVHEHAQKRAAPQQRAPAGARPACAPALPPRNSRARSALRILRPALH
AAQAAAQRWYAAAYDAAVDALGAAPLLRPYAPAAVKYAALALAALLVVHA
LLPLALLAVRVTVAALLLPFRCTWFILTCRCLRGGASAVHHNDKHKRKTQ
*

mRNA from alignment at Contig_20:97055..103716+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4047 ID=mRNA_4047|Name=jgi.p|Trimin1|348116|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6662bp|location=Sequence derived from alignment at Contig_20:97055..103716+ (Tribonema minus UTEX_B_3156 )
GGAGTGAGCATCAGGATGAGGCCGAGGGTGCTGGTGCTACTGGCATTGCT
ACTGCATGCTTGCTCGCCGGCAGCACCGCAGGAGTCTCGTGAGAACACTG
CACTGCAAGATCATGACAGCGACGCAACCACTACTGTGGGTGACGCCGGC
GTCTATGGAAGCGATGCCATTGACATCCAGCACGACAAGCAATCGGAGGA
TACAGCATCGGGCCCACAAGATTCAGTGCATGACGAGGAGGAGCCAAAGT
GAGTGCAGATGTTCAACTTCGCGTTCGAGCGCATTTCACAATATTATCGC
CAAAGTGTTGCTCGTGCCGCTATGTGAAGCATGGAGTAAAACATTGTTCA
AGCCGGGGGACAAGCTGCTCGTTGACGGCAGCTGAACGGAAGCTCTCTCA
CTTCATTATTCAAACAAAATGACAATCAAAGTTGAAGTTTGTTGTGACTC
GACAGTCATTGATCAGGCCTCTTTGTTTAACCCCGCTCTTGTCCATTGAC
GCCAACAATGCAGTATATATCTCCATTCACTGTCTGGTTTTGCTGTCTCG
CAGCACACCTGTCGGCAAGGCGGGCACAGCTGATGCCGAACTCGAAGAAG
ATGCAGAGCTCACTGTCTGGCAGGACGCATATGAGGACGAGGAAGCGGCG
GTTGATGCGGCTCATCTTGAACCACAGGAAGAAACGCAGCATGACGACTC
CTTCGCGGACGGTGAACGGCCAGCCGGCGATGACGCCGCAGCAGAGCTGC
AGAGCGCGGACGACGCGAGTGCTGGTGCAACAAGTCTTCTAAGCAACAGG
TCAGTGCGCTGCCGATGCTGCTCGCGCATGTCCGATCGGCAGACAGCTGC
TGACAAGGCGTAAGGGCGGAGCCAGCTTGTCAATGGCAGTGATACCAACT
GCTGTGCTTCATTTGCTGAGAAGCGTGGACCCAGGAAGCTTCGGCAATGC
AAGGCACAGTAGGCAGAGTCACGGCACTTGAGTAGCTGGCGGCGCAGCGG
GATTGAGCCTTCTCGAACAGCTGCACGGTTGTTGCATATCTCGCATGTCC
TGCTGGTCACAGTGCTCCTCCTGTTGCCCAATGCGTGTAACTCGACAGCG
CCGCAGCTGACGCGGAAGAAGAGGGCCACGTAATCGCGGCCGCAGCGGAT
GACCTGGGAGAACGCGGAGCAGCTGCAGCAGCGGGAGGCGAGGACGGACA
GCAGGGTGACGTGAGGGCGGCAGACGCTGCTGCGGCTGCTCTTGATGCGG
CAACAGCGGCGGGGGGGCGCGGGCAGGCGGACAGCGAACTGGTTTCTCAC
GACGCAGGTGGTGGTGCAACAGCAGCGGCAGCGGCGGCAGCGGCGGCAGA
TGTGCACGGCGATGCGGGTGCCAAGGGGACGCATGGCACCATTGGCGAAG
TGGGCACGGACAGAGCATCAGCGCAGGAGCCGCAAGCGAGCCAGGCGCGC
ACAGACGCACACACTGCAGCAGACGAACCAGCAGCGGCAGCAGCGGCGGC
GACGGCGGCGGAGGCGGCTGCAGCAGCGGCAGCGGCAGCAGGAGAGGAGA
TCGAGGCGCGCCAGCAGGGAGTGGGGGGGATGGCAGGGGCTGAGGGGGAT
GCAGGGGGCTCCTGCGGGGAGCAGGAAGGCGTGCTGCGGCGCGCCGTGGC
AGCGCTCGAGCACGCGCTGTCCGAGCGCGAGGAGCAGGTGCGCGGCCTGC
AGGAGGGGCACCGCGCGTCGCTGCAGGTAAGCGCTGGCGCGGTAACGCTC
CCCTGGTTTGAACTTCAAATTGGCATGTTTTTTGTGCTTGGGCAGTGATT
CGTGAAGGCTATGCACGAACAGACGCTGCCTCCGTCGGCCCATCGAGCAA
TGCTTGCGACATGTGCGGAACGCGATCGTGAGGACGTGGAAAGTGGAGTC
GGCGGTGATCATGGTCGTGCAAGGCATCAAAGAATCAACGGGAAGACAGA
CGTGCGCTGTTGTTGACAAAGTGGTGCATTCTAAGGGCGACCGTGCCCCG
CCGCATATTCACAGTCCTCGTTGCTGCCAGAATGACACCTTTGCATTTGA
TGGCATGACAAGTCGTATTTTGTGCAGTTCCATGATGCCATCGAACCAGA
GGGAGCATTGAGCGTTGCTGTCGACATAGTCAAGGATCAGCCTGCTCTCT
GCGCTGTTTCGCGAGCTCTGTCACCATTTCTAGAGATGACATCTACACGC
CATGGCGAGCTGCGGATCTGGCACACCTCACCGCAAACATGCACCCGTTT
CCAGCACTGATGCCGACGTGCCTTGCAGCACACCTCAAGTACACACATGC
GCATTGGAACTGATGTCGAGTGTGTGCAGGCGCTGAAGGACGCCATGGCG
CAGCAGCAGGCGGCCATGGAGGCGGAGCGCCAGAACTTTGTCGGCAGCTG
CCAGGAGAGCCTGGCGCACGCGCAGGGCGACATTGCGGCGCAGCTCAGGG
ATGCCAAGGTCAGCGAACAAACCTAATGTAGCAAATGCTGTTACAGTTGC
ATGTTTGCAACCGTAAGCGCTGTTGTGCTGTTACAGTTACGTTATGTGCT
CATTACAGTTTGGTGTCTTGCAGCGCCTTCAGTGGCTGAATCGGTAGTGC
CCCAGACTGCAAAGTGTCGTGCGGGCATCCTGAATCGCAGTCCCCCGGCT
GGGCTAGCTGCTCATGTCACGAAGTTGCCATGAGAAGTGGGCTGCGCGTG
CGGGTTTCGCGGCATGCAGCCGGGCTGGATGTTTAAGTCATTGTAGACGA
GCCCCGGGCGGAAGCGGTGCGCTGGCAATTCGCGCTGACCTCTCTTATAG
CGCGGACAGGTCCGACCTGGCGTCGCTGATTTGATTTGCTGGAAGCGCTG
ACAGCTGCGGCAGCAAGGTGCTGGTGCGTTCGGAGCACCGCCAGTGTCCT
ACCGCTTGCAGCCGCGCATCGTATCGCGTGGCGCCGTGTGCGGCAGTCGA
TCAGCGCTGTGGCGCTGGCATGTCGTGCCGCGGCGCCTCCTGTGCCCCCG
GTACTGTTCTGAGTCAGCTGTCCTACATTGCAGCTCGTCTTGTAATACTC
TCTCCCGCCGGGCGCCGCCCATGGGTTCATCAAGCAAGTGGTCCGTCTAC
CCTACAGCTTTCTCCGCTGACGCGCTGCGTCCGCACGATGCTATTCGCAT
CGCGCTTTTCTCATCCAACGCCACCATTCCCGCTCCGCCAGGCTCAACTT
GCGCACGCGAGGGAGGAAACCGCGGCAGTGGGGCAGGAGTGCGAGCTCGC
TGTGGCTGAGGCCCGCCATGAGGCGCGGCTCGCGGCGCTGGAGGTGAATC
GGGCGTGTGCAGTACGGTAGCATCACACGTTGCAGTTGACGTTGTCGTGA
AGCACTGGGTGACATACGTGTGCAGGCGACGATTGCGCCGGTCATGCTTT
GCACCTTCGCTGTCGTCGCAAAACGTAGGGCACGGCGTTGAGGTGCTGGA
GTGACCGTGTGACCGTGTGTGTGTGCGGGTGCGGCCACACTGTAGCGTCA
CATGTTGCAGTTTACGCTGTCTGCCAGTATACAAAAGTAATACTGCTCCA
GTGTTTGCGTCCGCGTTTCACGTACCACAACGAAGTCAACATTCGCCGGG
TTCAGCGCAGCCCAAATGGAGCAGCGTCACCTGCCCCCCGCACTGGCATG
TGCGCGTCACCTCCCGCTTGCAATACCGCTGTTTCCTCACAGGAAGCGGG
ATCCGCGGAGGACGTCGACCCATTCGATCCGCGCGCGCAGGGGCAGCGCG
ATGGCGCTCAGCCGGTGCAGCCCGCGGCAGCAGCGGTGGCGGCGGCGGCA
GGAGGGGAGCGCCACACGGGACTGACGTTCACCGCCAGGACGCTCGTTGA
CGATGCGTGCAGGTGACGATTCGCGTGCGCGCGTGCCTATTCTGGAAGGC
ACCGTCGTTGACGCCGCATGAGAAGGACGTGGCGCGCCGCCGCGCCCTCT
CCGTTGTCGCTGGCCTCGGTCGCGACAGCGCGTGCCATGAGCGCCGCAGA
GTGCGCGCAGAGAGAGTGTGCATGCCTTATGGCATGGCGCGCTTGAAGTT
CTTTGTTTGCATGTGCCCGAGCGCGGGCTCATGATGCGCGCTAGCGCGCC
CTGGCACAACCCCATGCTGATCGCTGCCACAATGTGGCCGCGTCGCCGCT
GTACCCGCGCGTGTGGCGCCGCGACCGATGTGTCTCGGCCGCCTTCGGCA
CGTTTTCAACTTCATCAGTCCAAATACACCTTTTGCGCTCATGCGGCGGA
TTCGTTGAGTAGAGCCTTCGCTGCACGTGGCTACACGTGTTGCCTCTGCA
CAATCTTAAAGCATATCTTACTCAGCTCCTGGGCACACCACGAGCTCATC
CGCAACCATTGTGCAGAGTCACACTGACCACTGGAACACTGCATGTCGCG
CGCCCCGCCGTCACAGGGTCACGGCGCACGTGTGGGTGGCAGCGCTCGAC
GCCGGCGAGGCCGTCGCGCTGCGCGTGTGGCACCACAGGGGGGAGCTGGG
GGCGCTGGGGGGCGCACTCGAGCGGGGGGTTGGGTCCCTGCAGGGGACTT
GGGAGGGGGTTCACCCTGCCGTGCACGAACACGCCCAAAAGGTGCCGATG
TGTTCTCGGTCGCTGCTTGTTTCTGTCATTCTGATGCAATGAAAGGAACG
GGGGGGGGGGGGGGGGGGGGGGGCATTGCGTAACGGGAAGTATATTTTTG
GCTATTGCTCAAGCGCGCATGAAGGTGGCAGCAGCAGGAGGGGAGGGCAT
GGACGTACGGCAACGGACCTCGGGGATTGTGCAGGCTACCTTGTCAAGTG
CTTATGGCCGGTCCGTCCCCTGCATCACACGCCTGCACGCGAGCAAAAGC
CAGTTGCCTAGATGACTGTACGCATAGGCCACACCTGGCGCCCTCACACC
CTGTGTACACCCAGCCCGGCGAATCGCCCCGTGCAGTCCTGCCGGCTCAT
CGTCGCCGCAAGCAGTAGAGGCGCAGGTGTCGCAGGCGCTGCCCCCGCCT
CGTCGCCAGCGCGCGGCGCCGCAGCAGCGCGCCCCGGCCGGCGCGCGCCC
GGCCTGCGCTCCTGCTTTGCCGCCGCGCAACTCGCGCGCCCGCTCCGCGC
TGCGCATCGTGCCGCTGATCTGTGTGCTGCGGATCAACGAACATCTGACG
TGGGCATGTGTCTGTGCCAGAAGACGGGGCTTGGAACCCCTACTCCCATG
AAGTGGGACCTACACCCAGTAGGGGTTGTGCCAGTTTGCACCAGTTGCAT
TTACAAAACAGAAGTCAAGCTTCTCCAACGGGGTGCAGAGCTTCCTGAAA
GGAACCGAGCTTATGATGCCCGTACCAACAACTGATGTCGTCCGCCCCGC
ACGCGCGCGCGCGCGCGCTTGCAGCTGCGGCCGGCGCTGCACGCGGCCCA
GGCGGCGGCGCAGCGGTGGTACGCGGCGGCATACGACGCGGCGGTTGACG
CGCTGGGCGCCGCGCCGCTGCTGCGGCCGTACGCGCCGGCAGCGGTCAAG
TACGCGGCGCTCGCGCTCGCGGCGCTGCTCGTCGTCCATGCGTTGCTGCC
GCTGGCGCTGCTGGCGGTCCGCGTGACGGTGGCAGCGCTGCTGCTGCCGT
TCAGGTGCGTTCGCTGCGCGCCGCCGCCGCCGCCGCGGCGCCGCAGTCTA
TGAAGCTCGGCGTAGGCGTGTGTATGAGTGTCGCATGCGCTGTGTGCAGC
GTTTGTGTGCAAAAGCGAACGCTAGTTTAAAAAGCAAGATGTTGCTGGTC
GCTGCCACGATGGTGCCCCCACCTGACTGCACTGCAATGCGTGGAGGCAA
CGTTGTACTGTAGCGCTTGTGGTGGGCTGCTGATGGCAGGTTTCACTGCC
TCTCGTGAAGAGCGCCAAGACTGGTTCTGCACGCACCTCAGCTTCCTGCA
CACAGTGTTTATAATACTTCCGTACAAAAGATACTTCTATCTTCAGATGT
ATGTTTTTCTTGCCAACATGCTGTGACTCATGGCAGAGCTCCCAGTGCAG
CTGGTAAAATGCAAGTGGAGGCTAGTGCTACATATTGTCGCAACTGAAAG
CAGAAGGTGCTTGCATCACTGCTGCATATTCAGGAGCATGTTGACTTGAC
CTCACTGTGGTGAGCAAATGTGCTGCAAAGTTGCATGAATCGCTACTCCA
TTTCAAGGTGAACACCACAAGTCACCAATGGCAGCGATAGTGGGCTGCAG
TGAAGGTTTGGCTGCGTGCGCTCTGCCACATTGTGCACAGCTGCACAAGC
AGAGCCTCTCTTGTCATTGAATGTATGTGCAGTTTTCCCATCTGACTTGT
ATGTCTGTTTGGCGTTAACGCAGGTGCACGTGGTTCATCCTCACATGCCG
CTGTCTAAGAGGAGGCGCGTCGGCGGTTCACCACAACGACAAGCACAAGC
GAAAAACACAGTGAGCAGCACACGCTCGCACAACACAGCGCGTCGCTGGA
CACCGGGGCGTTCTTGCAGCTCTATGTTGATATTTATAATGCCCGCTGCA
CCCTGGTGGCCAGCAACTCAAGTTCTGCTTCGGTGCTGCACGTCTTACGG
CATGCCTTGCTCCAAAAACGTTTTCGCCTGCACACAGCGTCGTTTTGTCC
GTTAGTTGGGGCGGTGATGCATTGAAGTGGCGGTGCATTGGTTTTTTTTT
TTTTTTTTTTTT

Coding sequence (CDS) from alignment at Contig_20:97055..103716+

>mRNA_4047 ID=mRNA_4047|Name=jgi.p|Trimin1|348116|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2103bp|location=Sequence derived from alignment at Contig_20:97055..103716+ (Tribonema minus UTEX_B_3156 )
ATGAGGCCGAGGGTGCTGGTGCTACTGGCATTGCTACTGCATGCTTGCTC
GCCGGCAGCACCGCAGGAGTCTCGTGAGAACACTGCACTGCAAGATCATG
ACAGCGACGCAACCACTACTGTGGGTGACGCCGGCGTCTATGGAAGCGAT
GCCATTGACATCCAGCACGACAAGCAATCGGAGGATACAGCATCGGGCCC
ACAAGATTCAGTGCATGACGAGGAGGAGCCAAACACACCTGTCGGCAAGG
CGGGCACAGCTGATGCCGAACTCGAAGAAGATGCAGAGCTCACTGTCTGG
CAGGACGCATATGAGGACGAGGAAGCGGCGGTTGATGCGGCTCATCTTGA
ACCACAGGAAGAAACGCAGCATGACGACTCCTTCGCGGACGGTGAACGGC
CAGCCGGCGATGACGCCGCAGCAGAGCTGCAGAGCGCGGACGACGCGAGT
GCTGGTGCAACAAGTCTTCTAAGCAACAGCGCCGCAGCTGACGCGGAAGA
AGAGGGCCACGTAATCGCGGCCGCAGCGGATGACCTGGGAGAACGCGGAG
CAGCTGCAGCAGCGGGAGGCGAGGACGGACAGCAGGGTGACGTGAGGGCG
GCAGACGCTGCTGCGGCTGCTCTTGATGCGGCAACAGCGGCGGGGGGGCG
CGGGCAGGCGGACAGCGAACTGGTTTCTCACGACGCAGGTGGTGGTGCAA
CAGCAGCGGCAGCGGCGGCAGCGGCGGCAGATGTGCACGGCGATGCGGGT
GCCAAGGGGACGCATGGCACCATTGGCGAAGTGGGCACGGACAGAGCATC
AGCGCAGGAGCCGCAAGCGAGCCAGGCGCGCACAGACGCACACACTGCAG
CAGACGAACCAGCAGCGGCAGCAGCGGCGGCGACGGCGGCGGAGGCGGCT
GCAGCAGCGGCAGCGGCAGCAGGAGAGGAGATCGAGGCGCGCCAGCAGGG
AGTGGGGGGGATGGCAGGGGCTGAGGGGGATGCAGGGGGCTCCTGCGGGG
AGCAGGAAGGCGTGCTGCGGCGCGCCGTGGCAGCGCTCGAGCACGCGCTG
TCCGAGCGCGAGGAGCAGGTGCGCGGCCTGCAGGAGGGGCACCGCGCGTC
GCTGCAGGCGCTGAAGGACGCCATGGCGCAGCAGCAGGCGGCCATGGAGG
CGGAGCGCCAGAACTTTGTCGGCAGCTGCCAGGAGAGCCTGGCGCACGCG
CAGGGCGACATTGCGGCGCAGCTCAGGGATGCCAAGGCTCAACTTGCGCA
CGCGAGGGAGGAAACCGCGGCAGTGGGGCAGGAGTGCGAGCTCGCTGTGG
CTGAGGCCCGCCATGAGGCGCGGCTCGCGGCGCTGGAGGAAGCGGGATCC
GCGGAGGACGTCGACCCATTCGATCCGCGCGCGCAGGGGCAGCGCGATGG
CGCTCAGCCGGTGCAGCCCGCGGCAGCAGCGGTGGCGGCGGCGGCAGGAG
GGGAGCGCCACACGGGACTGACGTTCACCGCCAGGACGCTCGTTGACGAT
GCGTGCAGGGTCACGGCGCACGTGTGGGTGGCAGCGCTCGACGCCGGCGA
GGCCGTCGCGCTGCGCGTGTGGCACCACAGGGGGGAGCTGGGGGCGCTGG
GGGGCGCACTCGAGCGGGGGGTTGGGTCCCTGCAGGGGACTTGGGAGGGG
GTTCACCCTGCCGTGCACGAACACGCCCAAAAGCGCGCGGCGCCGCAGCA
GCGCGCCCCGGCCGGCGCGCGCCCGGCCTGCGCTCCTGCTTTGCCGCCGC
GCAACTCGCGCGCCCGCTCCGCGCTGCGCATCCTGCGGCCGGCGCTGCAC
GCGGCCCAGGCGGCGGCGCAGCGGTGGTACGCGGCGGCATACGACGCGGC
GGTTGACGCGCTGGGCGCCGCGCCGCTGCTGCGGCCGTACGCGCCGGCAG
CGGTCAAGTACGCGGCGCTCGCGCTCGCGGCGCTGCTCGTCGTCCATGCG
TTGCTGCCGCTGGCGCTGCTGGCGGTCCGCGTGACGGTGGCAGCGCTGCT
GCTGCCGTTCAGGTGCACGTGGTTCATCCTCACATGCCGCTGTCTAAGAG
GAGGCGCGTCGGCGGTTCACCACAACGACAAGCACAAGCGAAAAACACAG
TGA