mRNA_3970 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160916
Unique NamemRNA_3970
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A836CKY2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY2_9STRA)

HSP 1 Score: 655 bits (1691), Expect = 2.600e-235
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 1
Query:    1 MDSYPTYCDPFYRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPRRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAPPSHQHLAVAASKQLVGIAC 1212
            MDSYPTYCDPFYRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPRRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAPPSHQHLAVAASKQLVGIAC
Sbjct:    1 MDSYPTYCDPFYRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPRRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAPPSHQHLAVAASKQLVGIAC 404          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: D8LCF8_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF8_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 2.690e-89
Identity = 170/391 (43.48%), Postives = 215/391 (54.99%), Query Frame = 1
Query:   34 YRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPRRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAPPSHQHLAVAASKQLVGI 1206
            YRMP E+AV+V   +G+ + + + +E+    G K + GGY+ R TG+ FHHASTQFG R+R VK+T +LR+RDTQT +++T   QT  ECGTQM R+ +HL    D     G Y TA EYW  R    VT+QR+WRG +AR+RVW  R+ +W       +                     +P T  DFE+LYNEL  W  AE     +   G  R+ A+  LL KETRLLQTI                                        T WT RA +L  +Y AL APL+   ERLDVLLH+KW V  F+CRLTR++ EL+DREADLLSRGR   S+  LR R   LFLRF ETPDFNPEASRF+R PP +  L       L G+
Sbjct:    2 YRMPEEIAVKV-LVEGEVKEMSIKLERFE--GTKVFQGGYRHRGTGRLFHHASTQFGQRERPVKNTDHLRTRDTQTCKIKTTTMQTTNECGTQMARKDMHLDDGCDTFKIAGEYRTAGEYWRVRERKTVTIQRFWRGFSARSRVWCRREEKWALEEKEMEEVAEEEGKRTQEKQREMQRRMNPSTVQDFEVLYNELDQWREAETKSIKQAEVGERRKLALRELLHKETRLLQTIDRLKITAAHEGKERRTRRMLELMSASKQWEMGDGEVSEIHTPWTNRARDLQDMYEALEAPLLSVEERLDVLLHLKWTVSEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFAETPDFNPEASRFIRVPPKYGKLTDEGMVGLTGV 389          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A7S1U7X5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7X5_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.240e-64
Identity = 156/395 (39.49%), Postives = 200/395 (50.63%), Query Frame = 1
Query:   10 YPTYCDPFYRMPTELAVRVER------GDGDAE---VIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTA-DEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPP---RRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAP 1155
            +P Y DP Y MPTE+ V+V R      G G  E   +I V VEK P G  KP LGGY+ + TG  +HHA TQ  +R R  +D S+LR RDTQT +  + R +T RE GTQM R  L +   +D       Y +A  +    R AC+ TMQRYWRG+ AR R    R            +A                    PRT ADFELLYNEL  W   E  +  +   G     +R A A LL KE++LLQTI                                        T ++ RA EL  LY  L APL+   ERL+VLL VKW V  F+C L+ +++EL++READLL+RGR++ +M GLR R   LFL FI+TP+FNP A +F + P
Sbjct:   35 WPEYADPNYVMPTEIEVKVGRVGTAATGMGSYEEQTIICVAVEKVPVGFRKPNLGGYRHKRTGLRYHHAGTQTEARTRPPRDMSSLRERDTQTYETVSRRTETVRESGTQMRRVDLDIDDTSDLVVYPKPYFSAAQQLEVNRKACI-TMQRYWRGYLARCRAHTKRMAILTMRAEEAAQAEMEENQAAERHQREIKRRLQPRTKADFELLYNELGTWRHREVQKIHDGVFGDTAEAKRRANAELLAKESKLLQTIDNMKGRASKEGRQVRVRKLLKMMSQPQKWELGDGHFVDVDTPFSVRAKELMDLYEGLTAPLMSTEERLNVLLSVKWTVAEFDCTLSSDIIELIEREADLLNRGRSSSTMTGLRQRVANLFLEFIQTPEFNPAAQQFSKVP 428          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: F0Y8I3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I3_AURAN)

HSP 1 Score: 213 bits (542), Expect = 3.990e-62
Identity = 148/360 (41.11%), Postives = 189/360 (52.50%), Query Frame = 1
Query:   94 IVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQ---FG---SRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPR--RAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLR 1149
            + V V KC     KPYLGGY+ + TGK +HHAS Q   FG    RK V      LR+RDTQT + +T  AQ+ RE GTQM+R  L +    D   +   Y TA +    +      +Q +WRG+ AR R WG+RQR +   VA  + A                   +PR+A DFELLYNEL AW A E  R   +P+  P   +AAM+ +L KET+ LQTI                                        T +T RA EL  LYR LA   +   ERL +LL+VKW V+ F C LT ++VEL DREADLL+RGR  +S+ GLR R   LF +FIETPDFNPE++RFL+
Sbjct:    1 VTVDVAKCTTR--KPYLGGYRHKKTGKVYHHASCQSAEFGLLPQRKNV----ECLRNRDTQTYETKTRSAQSNREYGTQMKREDLLMDDRGDVVRASRRYFTAAQLLELKRQKTQVLQCFWRGYLARRRTWGIRQRLYDAQVAEERGADEAGRAASRRRQFEVERRINPRSAKDFELLYNELEAWRAKEMERVRAIPDATPGDVKAAMSDVLAKETKALQTIDRLKAQAAKEGKARRVERVMELMAFPKKWEAGDGELHEVHTPFTTRAQELRDLYRGLATDRLPPDERLQILLNVKWTVQEFACPLTHDIVELCDREADLLNRGRNEKSLEGLRKRTETLFQQFIETPDFNPESTRFLK 354          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A6A3TZA4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TZA4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.750e-60
Identity = 156/385 (40.52%), Postives = 200/385 (51.95%), Query Frame = 1
Query:   13 PTYCDPFYRMPTELAVRVERGDGDA-EVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQ-FGSRKRVVKDTSNLR-SRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPP--RRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRA 1152
            PT  D  Y MP  + V+V   + D+  +I V ++K    G KPYLGG++ R T + FHHASTQ   SR R  ++   +R  R+TQT +L T   QT RE GTQM RR L L    D   S   Y  + +  + R   V+ MQR WRG  AR  V+ +R++R + +  A   A                   HP T +DFE+LYNEL  W   E  +  E  E  P  R+ A+ A+L KET+LLQTI                                        T +T RA EL  LY  L  PL    ERLD+LLH+KW V+ F+C LTRELVEL+DREAD+LSRGR  +S+ GLR R   LFL+FIETP+FNPEA+    A
Sbjct:  156 PTTSD--YVMPDRIQVQVYNEETDSTSIITVEIDKFT--GQKPYLGGFRHRKTQQHFHHASTQTILSRAR--RNMGPVRFHRETQTQELVTRSLQTHRESGTQMSRRDLQLDESFDRHVSARPYFDSYQLDSLREDSVLLMQRLWRGFRARLYVFNIREQRRRVSKLAEIEAQENETEDVNRQRREVNRRMHPNTVSDFEVLYNELDKWRQVECRKVREQRELDPSERQRALDAILSKETKLLQTIDRLKLTATDANRKQRIEAMLQFMARPKQWQMSDGGIKEVHTPFTVRAKELLDLYHGLRTPLSSVDERLDMLLHIKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPEAAALKHA 534          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: W2QPI0_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QPI0_PHYPN)

HSP 1 Score: 212 bits (540), Expect = 6.640e-60
Identity = 154/372 (41.40%), Postives = 193/372 (51.88%), Query Frame = 1
Query:   34 YRMPTELAVRVERGDGDA-EVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFG-SRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPP--RRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEAS 1137
            Y MP  + V+V   + D+  +I V +EK    G K YLGG+K R T + FHHASTQ   SR R     +    R+TQT QL T   QT RE GTQM RR L L    D   +   Y  + +  + R   V+ MQR+WRG  AR  V+ +R++R + T  A   A                   HP T +DFE+LYNEL  W   E  +  E  E  P  R+ A+ A+L KET+LLQTI                                        T +T RA EL  LY  L  PL    ERLD+LLHVKW V+ F+C LTRELVEL+DREAD+LSRGR  +S+ GLR R   LFL+FIETP+FNPEA+
Sbjct:  161 YVMPDRIQVQVYNEETDSTSIITVEIEKFT--GHKLYLGGFKHRKTLQQFHHASTQTVLSRARHNMGPARFH-RETQTQQLVTRSLQTHRESGTQMSRRDLKLDESFDRHVTARPYFDSYQLDSLREDSVLLMQRWWRGFRARLYVYSIREQRRRVTNLAEIEAHENEAEDVSRQRREVNRRMHPNTVSDFEILYNELEKWRQVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATEANRKQRIEAMLQFMARPKQWQMSDGGVKEVHTPFTVRAKELMDLYHGLRTPLSSVDERLDMLLHVKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPEAA 529          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A250WT96_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT96_9CHLO)

HSP 1 Score: 213 bits (543), Expect = 1.080e-59
Identity = 144/344 (41.86%), Postives = 185/344 (53.78%), Query Frame = 1
Query:  133 KPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPPR---RAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAP 1155
            KP++GGYK + TG  FHHA TQ     + +     L  R+TQTV++    AQT RE  TQMER G+ + T  D     G Y+T++E  A   A   T+QRYWRG+  R R   LR++R +R    R++       XXX          HPRTAADFE+LYNEL AW   E  +  ++  G P+   +  +  LL KET+LLQTI                                        T +T RA EL  LY  L   ++   ERLDVLLHVKW V+ F+C LTRE+VEL++READLL+RGR  + + GLR R   LFL FIETP+FNPE+SRF   P
Sbjct:  245 KPFVGGYKNKRTGVVFHHAWTQTPKEPKYLGVERKL-ERETQTVKVAQRSAQTMREAATQMERPGVIIDTSEDRELIPGRYLTSEERLAIVTAATWTIQRYWRGYLGRKRAGYLREKRDEREAFLREQERQARQEXXXHRRKEIERRMHPRTAADFEILYNELEAWRLQETGKIKQI--GMPKEKEQEVLQQLLHKETKLLQTIDRLKINANHENKDLRIQKTLKDMGKPKKFELKNGKAVDVHTPFTTRAMELMQLYNGLNLHMLTIDERLDVLLHVKWTVKEFDCNLTREIVELIEREADLLNRGRNPKLLEGLRKRISSLFLTFIETPEFNPESSRFQIVP 585          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A7S0WJW0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WJW0_9CHLO)

HSP 1 Score: 210 bits (534), Expect = 2.450e-58
Identity = 161/362 (44.48%), Postives = 204/362 (56.35%), Query Frame = 1
Query:   76 DGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAE--LPEGPPRRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAP 1155
            DG   V+ V +E   +G  + +LGG++ +  G T+ HA+ Q   + +V +      +R+TQT +++T   QT R+C TQM R  L L    D     G Y+T++E+   R    + +QRY RG  AR R   LR++R +R    R   XXXXXXXXXXXXXXXXX   PRT ADFE+LYNEL AW   E  +  E  LPE   RRAA+  LL KET+LLQTI                                        T +T R+ EL  LY  L  PL+   ERLDVLLHVKW V+ F+C LTRE VEL+DREADLL+RGR   SM GLR R   LFL+FIETP+FNPEA+R+   P
Sbjct:  238 DGPTRVVSVYIESTQQGKMQ-WLGGFRNKRNGATYLHATCQTDRKPKVYEKDKKF-TRETQTYEMKTRTQQTVRDCSTQMARPDLLLDPSMDREMVAGRYMTSEEHHQLRVKKTIVIQRYTRGCKARKRARELRKKREERQQFLRXXXXXXXXXXXXXXXXXXXXRMRPRTTADFEILYNELEAWRLQETQKINEAGLPEAE-RRAALRQLLHKETKLLQTIDRLKIAANAENRDVRIAHTLSDMAAPKSWEISDGTGVEVHTPFTTRSKELMQLYNGLRLPLLTTDERLDVLLHVKWTVKEFDCNLTREAVELIDREADLLNRGRNPTSMDGLRRRIANLFLQFIETPEFNPEATRYQIVP 596          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: A0A421EUQ5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EUQ5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 4.000e-58
Identity = 148/360 (41.11%), Postives = 188/360 (52.22%), Query Frame = 1
Query:   85 AEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQ-FGSRKRVVKDTSNLR-SRDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPP--RRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRA 1152
            A  IVV +EK    G KPYLGG++ R T + FHHASTQ   SR R  ++   +R  R+TQT +L T   QT RE GTQM RR L L    D   +   Y  + +  + R   V+ MQR WRG  AR+ V+ + ++R +  + A   A                   HP T +DFE+LYNEL  W   E  +  E  E  P  R+ A+ A+L KET+LLQTI                                        T +T RA EL  LY  L  PL    ERLD+LLH+KW V+ F+C LTRELVEL+DREAD+LSRGR  +S+ GLR R   LFL+FIETP+FNPEA+    A
Sbjct:  120 ASTIVVDIEKFT--GHKPYLGGFRHRKTQQQFHHASTQTILSRAR--RNMGPVRFHRETQTQELATRSLQTHRESGTQMTRRDLKLDETYDRHVTARPYFDSYQLDSLREDSVLLMQRLWRGFRARSYVYNIGEQRRRMDMLAEVEAQENEAEDVSRQRREVNRRMHPNTVSDFEVLYNELDKWRQVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATDANRKQRIEAMLQFMARPKQWQMSDGDVKEVHTPFTVRAKELMDLYHGLRMPLGSVDERLDMLLHIKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPEAAALKHA 475          
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Match: H3GFT4_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GFT4_PHYRM)

HSP 1 Score: 208 bits (529), Expect = 4.080e-58
Identity = 157/398 (39.45%), Postives = 199/398 (50.00%), Query Frame = 1
Query:   13 PTYCDPFYRMPTELAVRVERGDGDA-EVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRS---------------RDTQTVQLRTVRAQTRRECGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHAARARVWGLRQRRWQRTVAARQRAXXXXXXXXXXXXXXXXXXRHPRTAADFELLYNELAAWCAAEAARAAELPEGPP--RRAAMAALLRKETRLLQTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEWTARAAELAALYRALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRAARSMAGLRLRACGLFLRFIETPDFNPEASRFLRA 1152
            PT  D  Y MP  + V+V   + ++   I V VEK    G KP+LGG+K R T + FHHASTQ  +   VV D S L++               R+TQT  L T   QT RE GTQM RR + L    D   +   Y  + +  + R   V+ MQR WRG  AR  V+ +R++R + +  A   A                   HP T +DFE+LYNEL  W   E  +  E  E  P  R+ A+ A+L KET+LLQTI                                        T +T RA EL  LY  L  PL    ERLD+LLHVKW V+ F+C LTRELVEL+DREAD+LSRGR  +S+ GLR R   LFL+FIETP+FNPEA+    A
Sbjct:  164 PTTSD--YVMPNRIQVQVYNEETESTSTITVEVEKFS--GHKPFLGGFKHRKTQQHFHHASTQVPAV--VVADMSVLQTILSRARRNMGPPRFHRETQTQLLVTRSLQTHRESGTQMSRRDVKLDESFDRHVTARPYFDSYQLDSLREDSVLLMQRLWRGFRARLFVYNIREQRRRASKLAEIEAQENEADDISRQRREVNRRMHPNTVSDFEVLYNELDKWRLVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATEANRKQRIEAMLQFMGRPKQWQMSDGDIKEVHTPFTVRAKELMDLYHGLRTPLSSVDERLDMLLHVKWTVQEFDCPLTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPEAAALKHA 555          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160916 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKY2_9STRA2.600e-235100.00Flagellar associated protein n=1 Tax=Tribonema min... [more]
D8LCF8_ECTSI2.690e-8943.48Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S1U7X5_9STRA1.240e-6439.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0Y8I3_AURAN3.990e-6241.11Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6A3TZA4_9STRA4.750e-6040.52Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
W2QPI0_PHYPN6.640e-6041.40Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A250WT96_9CHLO1.080e-5941.86Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S0WJW0_9CHLO2.450e-5844.48Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A421EUQ5_9STRA4.000e-5841.11Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
H3GFT4_PHYRM4.080e-5839.45Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1027054..1028268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160916|e_gw1.15.281.1
GOsGO:0001669,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0008150,GO:0009987,GO:0012505,GO:0016043,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030141,GO:0031410,GO:0031514,GO:0031982,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044782,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060271,GO:0065007,GO:0070925,GO:0071840,GO:0097223,GO:0097708,GO:0099503,GO:0120025,GO:0120031,GO:0120036
Preferred nameIQUB
Descriptionsmoothened signaling pathway
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28JBT@1|root,2QRQT@2759|Eukaryota
Evalue4.4e-90
Seed ortholog2880.D8LCF8
Hectar predicted targeting categoryother localisation
TranscriptId161238
TrackFilteredModels1
ProteinId160916
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160916gene_3970Tribonema minus UTEX_B_3156 geneContig_15 1027054..1028268 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3970_1exon_3970_1Tribonema minus UTEX_B_3156 exonContig_15 1027054..1028268 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3970CDS_3970Tribonema minus UTEX_B_3156 CDSContig_15 1027054..1028268 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160916Trimin1|160916|e_gw1.15.281.1Tribonema minus UTEX_B_3156 polypeptideContig_15 1027054..1028268 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3970 ID=mRNA_3970|Name=jgi.p|Trimin1|160916|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1215bp|location=Sequence derived from alignment at Contig_15:1027054..1028268+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGCTATCCCACCTACTGCGACCCTTTCTACCGCATGCCCACGGA
GCTGGCTGTGCGGGTAGAAAGGGGAGACGGGGATGCGGAAGTGATAGTGG
TCATGGTGGAGAAGTGCCCCGAGGGCGGCTGCAAGCCGTACCTCGGCGGC
TACAAGGCGCGCGCCACCGGCAAGACCTTCCACCACGCCAGCACGCAGTT
CGGCAGCAGAAAGAGGGTCGTCAAGGACACCAGCAACCTGCGCAGCCGGG
ACACGCAGACCGTGCAGCTGCGCACCGTCCGCGCCCAGACGCGCCGCGAG
TGCGGCACGCAGATGGAGCGCCGCGGCCTGCACCTGAGCACTGACGCCGA
CGCTCCGTGCAGCGTCGGCGCCTACGTCACCGCCGACGAGTACTGGGCGC
GCCGCGCGGCATGCGTCGTCACCATGCAGCGCTACTGGCGCGGCCACGCG
GCGCGCGCGCGCGTCTGGGGGCTGCGGCAGCGCCGCTGGCAGCGCACCGT
CGCGGCGCGGCAGCGCGCGGCCGCGGCCGCCGCCGCCGAGGACCGCGCGC
GCGAGCGCGAGGCGCGCCGCCGCCGCCACCCGCGCACCGCCGCCGACTTC
GAGCTGCTCTACAACGAGCTCGCGGCGTGGTGCGCGGCGGAGGCGGCGCG
CGCCGCGGAGCTGCCGGAGGGGCCGCCGCGGCGCGCGGCGATGGCGGCGC
TGCTGCGCAAGGAGACGCGGCTGCTGCAGACAATAGAGGGGCTGAAGCGC
GCGGCGGCGCGCGCGGGGGCCGGTGCGCGCGTCGCGCGCACCCTCGACCT
CATGGCGCGGCCGAAGCGCTGGGAGCTGCGCGACGGCAGCGCGGCGCGCG
TCGCGACGGAGTGGACGGCGCGCGCGGCGGAGCTCGCGGCGCTGTACCGC
GCGCTCGCCGCGCCGCTCGTGGGCGCCGCGGAGCGCCTCGACGTGCTGCT
GCACGTCAAGTGGGCGGTGCGCGGCTTTGAGTGCCGCCTCACGCGCGAGC
TCGTGGAGCTGCTGGACCGCGAGGCCGACCTGCTGAGCCGCGGGCGCGCG
GCGCGCTCCATGGCGGGCCTGCGGCTGCGCGCATGCGGCCTGTTCCTGCG
CTTCATCGAGACGCCGGACTTCAACCCGGAGGCGTCGCGCTTCCTGCGCG
CGCCGCCGTCGCACCAGCACCTCGCGGTGGCGGCGTCCAAGCAGCTGGTG
GGCATCGCGTGCTGA
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protein sequence of jgi.p|Trimin1|160916

>Trimin1|160916|e_gw1.15.281.1 ID=Trimin1|160916|e_gw1.15.281.1|Name=jgi.p|Trimin1|160916|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=405bp
MDSYPTYCDPFYRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGG
YKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRE
CGTQMERRGLHLSTDADAPCSVGAYVTADEYWARRAACVVTMQRYWRGHA
ARARVWGLRQRRWQRTVAARQRAAAAAAAEDRAREREARRRRHPRTAADF
ELLYNELAAWCAAEAARAAELPEGPPRRAAMAALLRKETRLLQTIEGLKR
AAARAGAGARVARTLDLMARPKRWELRDGSAARVATEWTARAAELAALYR
ALAAPLVGAAERLDVLLHVKWAVRGFECRLTRELVELLDREADLLSRGRA
ARSMAGLRLRACGLFLRFIETPDFNPEASRFLRAPPSHQHLAVAASKQLV
GIAC*
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mRNA from alignment at Contig_15:1027054..1028268+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3970 ID=mRNA_3970|Name=jgi.p|Trimin1|160916|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1215bp|location=Sequence derived from alignment at Contig_15:1027054..1028268+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCTATCCCACCTACTGCGACCCTTTCTACCGCATGCCCACGGA GCTGGCTGTGCGGGTAGAAAGGGGAGACGGGGATGCGGAAGTGATAGTGG TCATGGTGGAGAAGTGCCCCGAGGGCGGCTGCAAGCCGTACCTCGGCGGC TACAAGGCGCGCGCCACCGGCAAGACCTTCCACCACGCCAGCACGCAGTT CGGCAGCAGAAAGAGGGTCGTCAAGGACACCAGCAACCTGCGCAGCCGGG ACACGCAGACCGTGCAGCTGCGCACCGTCCGCGCCCAGACGCGCCGCGAG TGCGGCACGCAGATGGAGCGCCGCGGCCTGCACCTGAGCACTGACGCCGA CGCTCCGTGCAGCGTCGGCGCCTACGTCACCGCCGACGAGTACTGGGCGC GCCGCGCGGCATGCGTCGTCACCATGCAGCGCTACTGGCGCGGCCACGCG GCGCGCGCGCGCGTCTGGGGGCTGCGGCAGCGCCGCTGGCAGCGCACCGT CGCGGCGCGGCAGCGCGCGGCCGCGGCCGCCGCCGCCGAGGACCGCGCGC GCGAGCGCGAGGCGCGCCGCCGCCGCCACCCGCGCACCGCCGCCGACTTC GAGCTGCTCTACAACGAGCTCGCGGCGTGGTGCGCGGCGGAGGCGGCGCG CGCCGCGGAGCTGCCGGAGGGGCCGCCGCGGCGCGCGGCGATGGCGGCGC TGCTGCGCAAGGAGACGCGGCTGCTGCAGACAATAGAGGGGCTGAAGCGC GCGGCGGCGCGCGCGGGGGCCGGTGCGCGCGTCGCGCGCACCCTCGACCT CATGGCGCGGCCGAAGCGCTGGGAGCTGCGCGACGGCAGCGCGGCGCGCG TCGCGACGGAGTGGACGGCGCGCGCGGCGGAGCTCGCGGCGCTGTACCGC GCGCTCGCCGCGCCGCTCGTGGGCGCCGCGGAGCGCCTCGACGTGCTGCT GCACGTCAAGTGGGCGGTGCGCGGCTTTGAGTGCCGCCTCACGCGCGAGC TCGTGGAGCTGCTGGACCGCGAGGCCGACCTGCTGAGCCGCGGGCGCGCG GCGCGCTCCATGGCGGGCCTGCGGCTGCGCGCATGCGGCCTGTTCCTGCG CTTCATCGAGACGCCGGACTTCAACCCGGAGGCGTCGCGCTTCCTGCGCG CGCCGCCGTCGCACCAGCACCTCGCGGTGGCGGCGTCCAAGCAGCTGGTG GGCATCGCGTGCTGA
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Coding sequence (CDS) from alignment at Contig_15:1027054..1028268+

>mRNA_3970 ID=mRNA_3970|Name=jgi.p|Trimin1|160916|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1215bp|location=Sequence derived from alignment at Contig_15:1027054..1028268+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCTATCCCACCTACTGCGACCCTTTCTACCGCATGCCCACGGA
GCTGGCTGTGCGGGTAGAAAGGGGAGACGGGGATGCGGAAGTGATAGTGG
TCATGGTGGAGAAGTGCCCCGAGGGCGGCTGCAAGCCGTACCTCGGCGGC
TACAAGGCGCGCGCCACCGGCAAGACCTTCCACCACGCCAGCACGCAGTT
CGGCAGCAGAAAGAGGGTCGTCAAGGACACCAGCAACCTGCGCAGCCGGG
ACACGCAGACCGTGCAGCTGCGCACCGTCCGCGCCCAGACGCGCCGCGAG
TGCGGCACGCAGATGGAGCGCCGCGGCCTGCACCTGAGCACTGACGCCGA
CGCTCCGTGCAGCGTCGGCGCCTACGTCACCGCCGACGAGTACTGGGCGC
GCCGCGCGGCATGCGTCGTCACCATGCAGCGCTACTGGCGCGGCCACGCG
GCGCGCGCGCGCGTCTGGGGGCTGCGGCAGCGCCGCTGGCAGCGCACCGT
CGCGGCGCGGCAGCGCGCGGCCGCGGCCGCCGCCGCCGAGGACCGCGCGC
GCGAGCGCGAGGCGCGCCGCCGCCGCCACCCGCGCACCGCCGCCGACTTC
GAGCTGCTCTACAACGAGCTCGCGGCGTGGTGCGCGGCGGAGGCGGCGCG
CGCCGCGGAGCTGCCGGAGGGGCCGCCGCGGCGCGCGGCGATGGCGGCGC
TGCTGCGCAAGGAGACGCGGCTGCTGCAGACAATAGAGGGGCTGAAGCGC
GCGGCGGCGCGCGCGGGGGCCGGTGCGCGCGTCGCGCGCACCCTCGACCT
CATGGCGCGGCCGAAGCGCTGGGAGCTGCGCGACGGCAGCGCGGCGCGCG
TCGCGACGGAGTGGACGGCGCGCGCGGCGGAGCTCGCGGCGCTGTACCGC
GCGCTCGCCGCGCCGCTCGTGGGCGCCGCGGAGCGCCTCGACGTGCTGCT
GCACGTCAAGTGGGCGGTGCGCGGCTTTGAGTGCCGCCTCACGCGCGAGC
TCGTGGAGCTGCTGGACCGCGAGGCCGACCTGCTGAGCCGCGGGCGCGCG
GCGCGCTCCATGGCGGGCCTGCGGCTGCGCGCATGCGGCCTGTTCCTGCG
CTTCATCGAGACGCCGGACTTCAACCCGGAGGCGTCGCGCTTCCTGCGCG
CGCCGCCGTCGCACCAGCACCTCGCGGTGGCGGCGTCCAAGCAGCTGGTG
GGCATCGCGTGCTGA
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