mRNA_395 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A835YSI6_9STRA (14-3-3-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI6_9STRA) HSP 1 Score: 471 bits (1212), Expect = 2.270e-165 Identity = 242/249 (97.19%), Postives = 247/249 (99.20%), Query Frame = 3
Query: 36 MDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAGNDADGTRVEDLP 782
MDRSALVYQAKLAEQAERFDEMV++MKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEIL IIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESS+KALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGD+AG DADGTRVED+P
Sbjct: 1 MDRSALVYQAKLAEQAERFDEMVSFMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILGIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSDKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDEAGADADGTRVEDMP 249
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: W7TWA9_9STRA (14-3-3-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWA9_9STRA) HSP 1 Score: 375 bits (962), Expect = 2.420e-127 Identity = 197/247 (79.76%), Postives = 220/247 (89.07%), Query Frame = 3
Query: 42 RSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAG-NDADGTRVEDL 779
R +LVY+AKLAEQAERFDEMV +MK V+ QPQELSVEERNLLSVAYKNVIG+RRASWRVISSIEQKGE E+LPLIR+YK KIE EL EIC +ILNIIE ELIPNS++ EGKVFY+KMKGDYHRYL+EFQ + R+ESS+ AL AY+ AT+ + DLPPTHPIRLGLALNFSVF+YEI NSP+RAC LAK+AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ E D+AG N+ DG RVEDL
Sbjct: 4 RDSLVYKAKLAEQAERFDEMVDHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKGEQERLPLIREYKAKIEDELLEICNDILNIIETELIPNSTSEEGKVFYFKMKGDYHRYLAEFQVGEKRRESSDAALSAYKCATDIAEHDLPPTHPIRLGLALNFSVFFYEIYNSPDRACALAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQNEADEAGANNEDGNRVEDL 250
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A1Z5JP80_FISSO (14-3-3 protein epsilon n=4 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JP80_FISSO) HSP 1 Score: 368 bits (944), Expect = 1.060e-124 Identity = 188/236 (79.66%), Postives = 213/236 (90.25%), Query Frame = 3
Query: 36 MDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDA 743
MDR ALVY+AKLAEQAERFDEMV+ MK V+ QPQEL+VEERNLLSVAYKNVIG+RRASWRV++SIEQKG+P+K+ +I+DYK KIETEL EIC +IL+IIE+ LIPNS++ E KVFYYKMKGDYHRYLSEFQ D RKES+ AL+AYQ A+ + DLPPTHPIRLGLALNFSVFYYEILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ EGDDA
Sbjct: 1 MDREALVYKAKLAEQAERFDEMVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPDKMTIIKDYKAKIETELVEICNDILSIIEDSLIPNSTSEEAKVFYYKMKGDYHRYLSEFQVGDTRKESASAALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAEGDDA 236
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: 1433_FUCVE (14-3-3-like protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=1433_FUCVE) HSP 1 Score: 362 bits (929), Expect = 2.570e-122 Identity = 195/248 (78.63%), Postives = 217/248 (87.50%), Query Frame = 3
Query: 42 RSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGE-PEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLI-MQLLRDNLTLWTSDQGEGDDAGNDADGTRVEDL 779
R LVY AKLAEQAERFDEMV +MK V+ QP+ELSVEERNLLSVAYKNVIG+RRASWRVISSIE K ++LPLIRDYK KIETEL +IC +IL IIE ELIPNS++ EGKVFYYKMKGDYHRYL+EFQ+ D RK S+ AL+AYQ A++ ++QDLPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFDDAIAELDTLSEESYKDSTLI MQLLRDNLTLWTSDQGE ++A +ADGT VEDL
Sbjct: 4 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 251
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A7S1ZMH4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMH4_TRICV) HSP 1 Score: 362 bits (929), Expect = 3.170e-122 Identity = 190/247 (76.92%), Postives = 215/247 (87.04%), Query Frame = 3
Query: 9 YGSYRNASNMDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ-GEGDDAG 746
+G R+ MDR +LVY+AKLAEQAERFD+MV MK+V+ QPQEL+VEERNLLSVAYKNVIG+RRASWRV++SIEQKG+PEKLP I+DYK KIE EL ++C +IL IIE+ LIPNSS+ E KVFYYKMKGDYHRYLSEFQ ARKES+ AL+AYQ A+ + DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD GE D AG
Sbjct: 5 FGLERHTVIMDRDSLVYKAKLAEQAERFDDMVADMKEVAQQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPEKLPTIKDYKAKIEGELVQVCGDILGIIESSLIPNSSSEEAKVFYYKMKGDYHRYLSEFQTGTARKESASAALDAYQAASGVASADLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNAGEADGAG 251
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A7S1H1R2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1R2_9STRA) HSP 1 Score: 362 bits (928), Expect = 5.350e-122 Identity = 192/246 (78.05%), Postives = 214/246 (86.99%), Query Frame = 3
Query: 39 DRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAGNDADGTRVED 776
DR LVY+AKLAEQAERFDEMVT MK+V+ QPQEL+VEERNLLSVAYKNVIGARRASWRV++SIEQKGEP+KLP I+DYK KIE EL +IC +IL+IIE LI NS++ E KVFYYKMKGDYHRYLSEFQA D+RKES+ AL+AYQ A+ + DLPPTHPIRLGLALNFSVFYYEILNSP++ACN+AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ DAG D VED
Sbjct: 19 DRDTLVYKAKLAEQAERFDEMVTDMKEVARQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKGEPDKLPTIKDYKAKIENELVDICNDILSIIEESLIRNSTSEEAKVFYYKMKGDYHRYLSEFQAGDSRKESATSALDAYQAASRIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACNIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAA--DAG---DAPEVED 259
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A8J2SJV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJV0_9STRA) HSP 1 Score: 359 bits (922), Expect = 2.960e-121 Identity = 191/249 (76.71%), Postives = 214/249 (85.94%), Query Frame = 3
Query: 33 NMDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAGNDADGTRVEDL 779
N R LVY AKLAEQAERFDEMV +MK V+ +ELSVEERNLLSVAYKNVIG+RRASWRVISSIEQK + EK LI +YKKKIETELE IC +IL IIE LIPNS+ EGKVFYYKMKGDYHRYL+EFQ+ D RKESS ALE+YQ A++ +++DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD + + N+ADGT V+DL
Sbjct: 4 NNTRENLVYLAKLAEQAERFDEMVDHMKSVANYSEELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKSDSEKTALITNYKKKIETELETICEDILGIIEKTLIPNSAGDEGKVFYYKMKGDYHRYLAEFQSADKRKESSSSALESYQQASQIANKDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNADNNHD-NNADGTAVQDL 251
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A7S1GIM8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIM8_CYCTE) HSP 1 Score: 358 bits (919), Expect = 8.160e-121 Identity = 185/241 (76.76%), Postives = 212/241 (87.97%), Query Frame = 3
Query: 36 MDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAGNDAD 758
MDR +LVY+AKLAEQAERFDEMVT MK+V+ QPQEL+VEERNLLSVAYKNVIG+RRASWRV++SIEQKGEP+K+ +I+DYK KIE+EL EIC +IL II+ LIPNS++ E KVFYYKMKGDYHRYLSEFQ DARK S+ AL+AYQ A+ + DLPPTHPIRLGLALNFSVFYYEILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ D G +A+
Sbjct: 6 MDRESLVYKAKLAEQAERFDEMVTDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGEPDKMTIIKDYKAKIESELVEICNDILGIIDESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQIGDARKSSASSALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDQACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQTAEADDGPEAE 246
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: A0A7S0GLL5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLL5_9STRA) HSP 1 Score: 358 bits (918), Expect = 2.030e-120 Identity = 187/259 (72.20%), Postives = 216/259 (83.40%), Query Frame = 3
Query: 3 DLYGSYRNASNMDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAGNDADGTRVEDL 779
+ G +N S MDR LVY+AKLAEQAERFDEMV+ MK V+ QPQEL+VEERNLLSVAYKNVIG+RRASWRV++SIEQKG+ +K+ +IRDYK KIE EL IC +IL+IIE+ LIPNSS+ E KVFYYKMKGDYHRYLSEFQ + RKES+ AL+AYQ A+ + DLPPTHPIRLGLALNFSVFYYEILNSP++AC +AK+AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD G +D +D E+L
Sbjct: 6 NFVGRKKNYSKMDRDILVYKAKLAEQAERFDEMVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDADKMTIIRDYKNKIEEELVNICNDILSIIEDSLIPNSSSQEAKVFYYKMKGDYHRYLSEFQQAETRKESASNALDAYQAASTIATADLPPTHPIRLGLALNFSVFYYEILNSPDKACEIAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTGAENDGAPPSDEATEENL 264
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Match: B8BX06_THAPS (14-3-3-like protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BX06_THAPS) HSP 1 Score: 357 bits (916), Expect = 2.100e-120 Identity = 184/237 (77.64%), Postives = 210/237 (88.61%), Query Frame = 3
Query: 36 MDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILNIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSEKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDDAG 746
MDR +LVY+AKLAEQAERFDEMV+ MK+V+ QPQEL+VEERNLLSVAYKNVIG+RRASWRV++SIEQKG+ +K+ +I+DYK KIE EL +IC +IL+IIE LIPNS++ E KVFYYKMKGDYHRYLSEFQ D RK S+ AL+AYQ ATE + DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ +AG
Sbjct: 1 MDRDSLVYKAKLAEQAERFDEMVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDADKMSIIKDYKAKIENELCDICNDILSIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQQGDVRKASASAALDAYQSATEVASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQAADAEAG 237 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|54790 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_395 ID=mRNA_395|Name=jgi.p|Trimin1|54790|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1127bp|location=Sequence derived from alignment at Contig_3:1212555..1216713- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGACCTTTACGGAAGCTACAGGAACGCAAGCAACATGGACCGATCAGCAback to top protein sequence of jgi.p|Trimin1|54790 >Trimin1|54790|CE54789_2485 ID=Trimin1|54790|CE54789_2485|Name=jgi.p|Trimin1|54790|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp MDRSALVYQAKLAEQAERFDEMVTYMKQVSVQPQELSVEERNLLSVAYKNback to top mRNA from alignment at Contig_3:1212555..1216713- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_395 ID=mRNA_395|Name=jgi.p|Trimin1|54790|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4159bp|location=Sequence derived from alignment at Contig_3:1212555..1216713- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1212555..1216713- >mRNA_395 ID=mRNA_395|Name=jgi.p|Trimin1|54790|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=750bp|location=Sequence derived from alignment at Contig_3:1212555..1216713- (Tribonema minus UTEX_B_3156 )back to top |