mRNA_3955 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A836CJP5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP5_9STRA) HSP 1 Score: 454 bits (1167), Expect = 2.430e-160 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 Query: 1 MSCTLSLTCWCGPVLPPLAPSQTAVLAFQAPVPLPFDMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELSGSGLGVS 774 MSCTLSLTCWCGPVLPPLAPSQTAVLAFQAPVPLPFDMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELSGSGLGVS Sbjct: 1 MSCTLSLTCWCGPVLPPLAPSQTAVLAFQAPVPLPFDMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELSGSGLGVS 258
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A1Y1VA88_9FUNG (Alpha/beta-hydrolase n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VA88_9FUNG) HSP 1 Score: 79.0 bits (193), Expect = 1.120e-13 Identity = 68/231 (29.44%), Postives = 109/231 (47.19%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLP-FDMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELS 753 QTA++A +AP P+P FD G W+ +FD+ G+ L T RM+ L + + + +E L + + IF FG++QGGT+AL +A+ A A A+GGVISI G LLEE+ + ++ P+ I G D A +A + S ++ G+ + S+ E R +M F+++ L+ R V LE +++ ELS Sbjct: 65 QTAIVALEAPFPIPYFDEGTAWYPSFDNYGELL--TSASPYRMQGLLKTRDMVSKFVEELVNRYKYNYRQIFFFGFSQGGTIALDSAIFGAKA------AIGGVISISGYLLEEEKRLGIKGCQEKWNTINKSVPIFITQGSADETISVREAQDNAQFIKSLCGEFNHK------------------IIPGKNHNMVSSQVETRAIMEFISKFLNIRNVKLESMSNLYELS 269
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A367J0V1_RHIST (Abhydrolase_2 domain-containing protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J0V1_RHIST) HSP 1 Score: 74.7 bits (182), Expect = 3.980e-12 Identity = 53/116 (45.69%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPFDMG-YCWHDTFDD-EGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQ 405 QTA LA QAP +P+ G Y W TFD GD L PG+ RMK L + + + +E L W IFLFG++QGGT+AL T L + LGGVISI G LLEEQ Sbjct: 73 QTATLAVQAPETVPYMDGCYQWFPTFDMFTGDFLV--PGNPERMKGLTNTRKKMDELLEHLINHCDWNPPNIFLFGFSQGGTIALDTVLF------GNVRNLGGVISISGYLLEEQ 180
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A8H7RXD6_9FUNG (Abhydrolase_2 domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RXD6_9FUNG) HSP 1 Score: 74.3 bits (181), Expect = 5.150e-12 Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPFDMG-YCWHDTFDD-EGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQ 405 QTA LA QAP P+P+ G Y W+ +FD GD L TP + R+K L + + + +E L + IFLFG++QGGTVAL AL + I LGGVISI G LLEEQ Sbjct: 66 QTATLAIQAPEPVPYMDGCYQWYPSFDFLTGDML--TPANPERLKGLFRTRKLVSELLEHLITDCGFEASRIFLFGFSQGGTVALDIALFGSE-----IRNLGGVISISGYLLEEQ 174
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A1Y1X2I4_9FUNG (Alpha/beta-hydrolase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X2I4_9FUNG) HSP 1 Score: 73.9 bits (180), Expect = 7.330e-12 Identity = 66/231 (28.57%), Postives = 108/231 (46.75%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLP-FDMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELS 753 QTA++A +AP P+P FD G W+ +FD+ G+ L T RM+ L + + + +E L + + IF FG++QGGT+AL +A+ A+GGVISI G LLEE+ + + ++ P+ I G D + A +A + S + G+G + S+ E R +M FL++ L R + LE +++ E+S Sbjct: 67 QTAIVAIRAPFPIPYFDEGTAWYPSFDNYGELL--TSSSPYRMQGLLKTREIISKFVEVLVNKYGYNYREIFFFGFSQGGTIALDSAIFGVKG------AIGGVISISGYLLEEEKKLGIKGCQEKWKILNKSVPIFITQGTSDETITVNEAKDNAQFIKSLCGEFNHKF------------------ISGKGHTMVSSQVETRSIMEFLSKFLRIRNLKLESMSNLYEIS 271
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A1X2HYU3_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2HYU3_9FUNG) HSP 1 Score: 70.1 bits (170), Expect = 1.720e-10 Identity = 74/247 (29.96%), Postives = 105/247 (42.51%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPFDMGYC--WHDTFDD-EGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLL--EEQLAVAAGAGAAPARPAAEATPVLILCGDKDA------QAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELSGSGLGV 771 QTA LA QAP P+P+ G C W+ +F+ G+ L PG + K L + L + I L H+ IFLFG++QGG VAL L I LGGV+SI G ++ EE +P P+LI G+KD+ QA S+ +++ G+G S++E R + AF A + RR + LE+ ADV E+ GV Sbjct: 65 QTATLAVQAPEPIPYMDGGCYQWYPSFNMMTGEVLP--PGHTEQKKGLLKTRKLLAELIHHLIEDCHYNAPHIFLFGFSQGGVVALDQVLK------GEIRNLGGVVSISGYIMTMEEN----------DCQPTLYDGPILITQGEKDSVIGSKTQAEKMFGQVKQFCTSSAQ--------------------TQLLFFAGKGHSMPASQQEWRAIHAFFASQMPRRNLQLENMADVYEIRPGNGGV 273
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A1C7N727_9FUNG (Abhydrolase_2 domain-containing protein n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N727_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 2.130e-10 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPF-DMGYCWHDTFDD-EGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLA 411 QTA+++ QAP P+P+ D + W+ +FD GD L TP + R+K L + + + + L + IFLFG++QGGTVAL T L I LGGV+SI G LLEEQ A Sbjct: 68 QTAIISIQAPEPVPYLDGCFQWYPSFDFLTGDLL--TPTNPERLKGLIRTRQLIAELLHHLINDCGFQPPNIFLFGFSQGGTVALDTVLF------GKIRNLGGVVSISGYLLEEQRA 177
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A6A4I4R6_9AGAR (Abhydrolase_2 domain-containing protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4I4R6_9AGAR) HSP 1 Score: 69.7 bits (169), Expect = 2.160e-10 Identity = 71/226 (31.42%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPF--DMGYCWHDTFDDEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTL------AHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMV 717 QTAVLA QAP +PF + Y W+ +FD G+ + ER S A+ L ++ L WP+D I LFG+AQGGTVAL A+ A +S +LG +++I G LL P P TP+L + + A P L+ AL + V L+ RG G S+ E P+M F + LSRR V Sbjct: 66 QTAVLALQAPEKIPFLYEEAYQWYTSFDPLGELI------ERPNPS--AAIDLLSDVLKHLIEVCSWPSDKIHLFGFAQGGTVALELAIQFWKNQINAKSSKSSSLSLGSIVTISGPLLSY-----------PTLPTPSPTPILAVY--RPPPADPSLSGGDLTALKKGFNT------------------VKEVKLQSRGPGMPSSKDEWEPIMRFWSERLSRRQV 252
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: I1BHT5_RHIO9 (Abhydrolase_2 domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BHT5_RHIO9) HSP 1 Score: 69.7 bits (169), Expect = 2.350e-10 Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPFDMG-YCWHDTFDD-EGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTDCIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQ 405 QTA L+ QAP +P+ G Y W +FD GD LA PG+ R+K L + + + ++ L W IFLFG++QGGT+AL T L + LGGVISI G LLEEQ Sbjct: 71 QTATLSVQAPEIVPYMDGCYQWFPSFDMFTGDLLA--PGNPERIKGLMNTRKKMDELLDHLIHHCGWNPPNIFLFGFSQGGTIALDTVLF------GSVRNLGGVISISGYLLEEQ 178
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Match: A0A433PIP3_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PIP3_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 2.940e-10 Identity = 77/237 (32.49%), Postives = 105/237 (44.30%), Query Frame = 1 Query: 64 QTAVLAFQAPVPLPF-DMGYCWHDTFD-DEGDTLAYTPGDERRMKSLNASTSTLIQAIEALRLQLHWPTD--CIFLFGYAQGGTVALSTALTLAHASAPPIPALGGVISICGVLLEEQLAVAAGAGAAPARPAAEATPVLILCGDKDAQAPPHLAHASAAALHSSXXXXXXXXXXXXXXXXXXXXXAEVVVLRGRGAGPLRSEREVRPVMAFLARCLSRRMVALEDSADVVELSGSG 762 QTA LA +AP P+PF D G+ W F+ G+ L T R++ L+A T TL+ L H D CIF+FG++QGG+VAL AL + LGGV+S+ G LL+ Q V G A A E VL+L G+KD Q + + +G SERE + F A L+RR + LE +DV E+S +G Sbjct: 86 QTATLAIRAPTPIPFLDDGFQWFPAFNLSTGEDLPATH--PSRLEGLHA-TRTLLSTFLTTHLVPHCGFDPSCIFIFGFSQGGSVALDLALFGETRN------LGGVVSVMGYLLDMQ--VEGGNKEKVAENAYEGA-VLVLQGEKDEQL--------------GGKAVGEKKFEQLKQFCSPDAKLSQLFIPKKGHQMPNSEREWHAIHTFFAAHLARRNLQLEAMSDVYEVSRAG 296 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161049 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3955 ID=mRNA_3955|Name=jgi.p|Trimin1|161049|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_15:919188..919964- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCATGTACGCTGTCGCTGACATGCTGGTGCGGCCCTGTGTTGCCCCCback to top protein sequence of jgi.p|Trimin1|161049 >Trimin1|161049|e_gw1.15.102.1 ID=Trimin1|161049|e_gw1.15.102.1|Name=jgi.p|Trimin1|161049|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp MSCTLSLTCWCGPVLPPLAPSQTAVLAFQAPVPLPFDMGYCWHDTFDDEGback to top mRNA from alignment at Contig_15:919188..919964- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3955 ID=mRNA_3955|Name=jgi.p|Trimin1|161049|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_15:919188..919964- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_15:919188..919964- >mRNA_3955 ID=mRNA_3955|Name=jgi.p|Trimin1|161049|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_15:919188..919964- (Tribonema minus UTEX_B_3156 )back to top |