mRNA_3950 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A835ZD24_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD24_9STRA) HSP 1 Score: 1222 bits (3162), Expect = 0.000e+0 Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 1
Query: 1 MANLTRVAQLSLGLLSLRMNGSQAFAGVLQRSGARVGVPSVSPPVADAGIKESPVEHQHSVSADAMHIAKSFQPSEYHPPFWARNNHLHTIAASGDFELRFQGDRSGSGGSSSIGGGSIVTRSGPLYDPISSAAAPAPLSLAPSLGATSELASDFGSASTDGGSALPPTETDLAHIDSALEALADASILQLGGISHSAHDASSXXXXXXXXXXXXXXXXXXXXXRGGSRLEQWARGLLEGRGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVEAHLNGSAAAVTPETASVXXXXAAGGFAAQRGAAXXXXXXXXXXXXXXXXXXXXXGADAAGALNGAADAVHADLIGAFALDAEAPEAFAGYAALPPLLWRSSSCMHRSSSRSRGGSGLLTRKDDRGALASCLIAFGGELLAPPDQGKAIRCGRRTTQRSVFPATL 2112
MANLTRVAQLSLGLLSLRMNGSQAFAGVLQRSGARVGVPSVSPPVADAGIKESPVEHQHSVSADAMHIAKSFQPSEYHPPFWARNNHLHTIAASGDFELRFQGDRSGSGGSSSIGGGSIVTRSGPLYDPISSAAAPAPLSLAPSLGATSELASDFGSASTDGGSALPPTETDLAHIDSALEALADASILQLGGISHSAHDASSXXXXXXXXXXXXXXXXXXXXXRGGSRLEQWARGLLEGRGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVEAHLNGSAAAVTPETASVXXXXAAGGFAAQRGAAXXXXXXXXXXXXXXXXXXXXXGADAAGALNGAADAVHADLIGAFALDAEAPEAFAGYAALPPLLWRSSSCMHRSSSRSRGGSGLLTRKDDRGALASCLIAFGGELLAPPDQGKAIRCGRRTTQRSVFPATL
Sbjct: 1 MANLTRVAQLSLGLLSLRMNGSQAFAGVLQRSGARVGVPSVSPPVADAGIKESPVEHQHSVSADAMHIAKSFQPSEYHPPFWARNNHLHTIAASGDFELRFQGDRSGSGGSSSIGGGSIVTRSGPLYDPISSAAAPAPLSLAPSLGATSELASDFGSASTDGGSALPPTETDLAHIDSALEALADASILQLGGISHSAHDASSXXXXXXXXXXXXXXXXXXXXXRGGSRLEQWARGLLEGRGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVEAHLNGSAAAVTPETASVXXXXAAGGFAAQRGAAXXXXXXXXXXXXXXXXXXXXXGADAAGALNGAADAVHADLIGAFALDAEAPEAFAGYAALPPLLWRSSSCMHRSSSRSRGGSGLLTRKDDRGALASCLIAFGGELLAPPDQGKAIRCGRRTTQRSVFPATL 704
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: D7FJY4_ECTSI (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY4_ECTSI) HSP 1 Score: 274 bits (700), Expect = 4.160e-81 Identity = 143/301 (47.51%), Postives = 198/301 (65.78%), Query Frame = 1
Query: 721 RGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFL------AARRLASGREVK------DGRWLP 1587
+G+GG +G+A R+LV++LHGLE SST PLTKR + + G+DVAA+NFRGCSG+L+ P+GYHLG+TDDL ++ E+ R+FPG WDR+YL+GFSLG NVI+ FLG EQ RA R+ G+ GAAV C PF P + E LE+ +G+ +Y P F+ + KA AH + P E + + ++TF+ FN ++ P+F FSS E+YE V+A ++S+VRVPL+VVNA+DDP I + LP+ + + APV+LVYH GGHCGF+ A +R GR K G W+P
Sbjct: 37 KGKGG-QGSAGTRRLVLVLHGLEGSSTAPLTKRFSNVYTKNGFDVAALNFRGCSGQLSKYPVGYHLGFTDDLLHVIEEIHRKFPGTWDRIYLSGFSLGGNVIVKFLG-EQSDRA-RDLGIYGAAVGCVPFEPKVAAEKLEKDPIGRYVYTPIFMGWMNMKAAAHAKAFP---EKLSLETVQNVKTFTQFNSHILSPVFDFSSPDEFYEDVNASNYLSRVRVPLMVVNAKDDPFIDGDHLPEQER-------AAGAPVRLVYHTYGGHCGFMSGVLSTALQRKTPGRPRKWGGSPWGGSWVP 324
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A6H5JUH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH2_9PHAE) HSP 1 Score: 281 bits (718), Expect = 5.700e-81 Identity = 185/477 (38.78%), Postives = 259/477 (54.30%), Query Frame = 1
Query: 211 SFQPSEYHPPFWARNNHLHTIAASGDFELRFQGDRSGSGGSSSIGGGSIVTRSGPLYDPISSAAAPAPLSLAPSLGATSELASDFGSASTD---GGSALPPTETDLAHIDSALEA-LAD--ASILQLGGISHSAHDASSXXXXXXXXXXXXXXXXXXXXXRGGSRLEQWARGLLEGRGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFL------AARRLASGREVK------DGRWLP 1587
SF +Y PP WARN HLHTI ASGD E + GDR+ T G D I A P++ P + L +D A+ G AL E + I+ L+ + D + ++ ++ AH+ R +G+GG +G+ R+LV++LHGLE SST PLTKR ++ + G+DVAA+NFRGCSG+L+ P+GYHLG+TDDL ++ E+ R+FPG WDR+YL+GFSLG NVI+ FLG EQG RA R+ G+ GAAV C PF P + E LE+ +G+ +Y P F+ + KA AH + P E + + ++TF+ FN +V P+F FSS E+YE V+A ++S+VRVPL+VVNA+DDP I + LP+ + + APV+LVYH GGHCGF+ A ++ GR K G W+P
Sbjct: 134 SFVARDYVPPVWARNAHLHTIVASGDMEKKLLGDRA----PLEYWRERWPTSDGDFVD-IDWLPAEEPVNDDPREKTSGRLDTDTSQAAXXXXGAGDALLNGELE-GTINKGLDLQMRDDMKKLREMAELAERAHENDLGLGHPAAPEPVHDNDPSWMAERS--------------KGKGG-QGSGGTRRLVLVLHGLEGSSTAPLTKRFSKVYTKNGFDVAALNFRGCSGQLSKYPVGYHLGFTDDLLHVIEEIHRKFPGTWDRIYLSGFSLGGNVIVKFLG-EQGDRA-RDLGIYGAAVGCVPFEPKIAAEKLEKDPIGRYVYTPIFMGWMNMKAAAHAKAFP---EKLSLETVQNVKTFTQFNSHIVPPVFDFSSPDEFYEDVNASNYLSRVRVPLMVVNAKDDPFIDGDHLPEQER-------AAGAPVRLVYHTYGGHCGFMSGVLSKALQQKTPGRPRKWGGSPWGGSWVP 577
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: W7U3F6_9STRA (Alpha beta hydrolase fold protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3F6_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.670e-56 Identity = 124/295 (42.03%), Postives = 173/295 (58.64%), Query Frame = 1
Query: 757 RKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIE----DVEAAAIPRI---RTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVE 1620
R + ++LHGLES+S L + +A+AFA RG+DV A+NFRGC G N+K YHLG+TDDL+F + + P R+YLTGFSLG NVI+ LG E G+ AA GV GAAVAC PF+ S ++ T + +Y +F++ L+ KA H R E D E + R+ T DF++++V L F +YY +++++ VR+P LV+NARDDP I+ LP P+ V V+L+YH GGHCGFL + S +D RWLP EL RF++HV+
Sbjct: 169 RPMAIVLHGLESTSWAILPRSMAKAFARRGFDVLALNFRGCCGTENLKAYSYHLGFTDDLKFAIQRLFAEEPRR--RIYLTGFSLGGNVILKCLG-ELGEEAA-SMGVQGAAVACVPFDAVRSSSKID-TGFNRWVYAANFLSTLKVKAAKKYETHQRHREGKGVDKELYDLDRVLACSTIGDFDDEVVAKLHNFEDKIDYYRQSCSKQYLPLVRIPALVINARDDPFINEAGLPTPED-------VGDGTVRLIYHSYGGHCGFLTGQEKTSH---EDERWLPTELARFLEHVD 448
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A7S2UW57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW57_9STRA) HSP 1 Score: 207 bits (526), Expect = 4.040e-56 Identity = 118/291 (40.55%), Postives = 174/291 (59.79%), Query Frame = 1
Query: 760 KLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFP--GLWD--RVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVE 1620
++VV+LHGLES+S+ PLT ++A A A +G+DVA + FR CSGE N P YHLG+TDD+ F++ + ++ GL + R+YL+GFSLG NVI +LG E G+ A GV G AVAC PF+ AS ++ + +Y +F+ L KAE P I D++A I I+T +F+++ + ++GF ++YY +++++ V VPLL +NA DDP I +LP+P V APV+LVYH GGHCGF+++ G WL EL RF+ H++
Sbjct: 136 RVVVILHGLESTSSAPLTSKMAFAMARKGFDVAVMCFRSCSGEDNRTPGAYHLGFTDDIRFVVRALATKYDQQGLTEPRRIYLSGFSLGGNVIAKYLG-ELGEEAFNL-GVCGGAVACVPFDCVASQNKIDGGTFNRRIYSQNFLKTLIPKAERQAEKFP-GIFDIDA--IREIKTIGEFDDEFISKIYGFMGKEDYYTQSSSKQYLPNVAVPLLGLNAIDDPFIDQYSLPNPAE-------VRAAPVRLVYHKNGGHCGFVSSLPEYQGENKASRDWLADELARFIGHID 414
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A835ZB94_9STRA (Alpha/beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB94_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.830e-54 Identity = 122/303 (40.26%), Postives = 181/303 (59.74%), Query Frame = 1
Query: 733 GREGAAA--GRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGK-----AEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVE 1620
G EGAAA G K+ VL HGLES+ST PLT R+A AFA +GY VA + FR CSGE N YH+G+TDDL F++ +R+R P D ++L+GFSLG NVI +LG E G RA +E G+ GA+V+C PF+ E ++ + + +Y +F+ L+ K A+ L + + D+EA I + +F++ + ++GF S +YY + + +V VPLL + ARDDP + A+TLP + AP++L Y+DKGGHC F++ R + ++ WLP++L RF +H+E
Sbjct: 95 GGEGAAAAGGGKIAVLTHGLESTSTAPLTARMALAFAAKGYRVAVLCFRSCSGEDNRTLGAYHMGFTDDLGFLVETLRKRHPS--DPIFLSGFSLGGNVISKYLG-EIGSRA-QELGIIGASVSCVPFDAVGCQEQID-SGFNRRVYSGNFLKSLKPKIARKFADPALAEQAKKVLDLEA--ILACSSIGEFDDLYIAKVYGFDSATDYYIKNQSGPFLKKVTVPLLAIQARDDPFMRADTLPTQETCEG-------APIKLAYYDKGGHCAFISRDRA----DRENNGWLPLQLARFAEHLE 379
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: D8LPX1_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPX1_ECTSI) HSP 1 Score: 200 bits (509), Expect = 2.890e-53 Identity = 119/298 (39.93%), Postives = 165/298 (55.37%), Query Frame = 1
Query: 724 GEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHV 1617
G GG + + A VL HGLES+ST PLT ++A A+ +G+ VA + FR CSGE N+ YHLG+T+DLE + +R R P ++L+GFSLG NVI FLG E G RA R+ G+ G AV C PF+ A S + T G+++Y +F+N L K PR E ++ + RI T +F++ ++ P+FGF ++YY + + + VRVP L V A +DP + LP + APV+L YHD GGHC FL +E D WL E+ RF DHV
Sbjct: 181 GTGGVDASTA--PFAVLTHGLESTSTAPLTAKMALAYQRKGFRVAVMCFRSCSGEDNLTLRAYHLGFTEDLELVCKTLRARHPN--SPLFLSGFSLGGNVITKFLG-ELGDRA-RDMGIMGGAVTCVPFD-AVSCQQRVDTGFGKIVYAKNFLNSLIPKMMRKSLTDPRVAEVIDLKRLQRITTIGEFDDMVIAPVFGFDGYQDYYRKTQSGQFLKGVRVPFLAVQAINDPFMDPAKLPT-------VDDLQGAPVRLSYHDHGGHCAFLT-----DSQEENDKGWLATEMARFGDHV 459
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A7S0G3C2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3C2_9RHOD) HSP 1 Score: 197 bits (500), Expect = 8.780e-53 Identity = 116/295 (39.32%), Postives = 170/295 (57.63%), Query Frame = 1
Query: 754 GRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVEAHLNGS 1638
G+ +V+L HGLES+S P T+RI ++ A RG+ VAA+NFRGCSG++N YHLG+TDDL + + R R+YL+GFSLGANV++ FL + + A+ + GAAV C PF+P A LER +L+Y F+ L+ KA ++ P +V I RT +DF+ + P+FGF S +YY D R +S++ VP LVVNA DDP I ++LP+ + V APV+LVY ++GGH GF+ + V+ + + RF++H++ GS
Sbjct: 117 GKSIVILYHGLESTSRGPHTRRITKSLACRGHTVAAMNFRGCSGDVNTTLHDYHLGFTDDLATYVQILSSRVSDD-TRIYLSGFSLGANVVLKFLAERSAEELAK-FKIFGAAVQCVPFDPVACQAKLERG-FSRLVYSRRFLKSLKKKAIEKSKLFP---SEVNLKLIKAARTIADFDHAYIAPMFGFESNTDYYRKNDTRPLLSRINVPTLVVNALDDPFIEEKSLPNQEE-------VGKAPVKLVYTERGGHLGFI--------QSVRGESYAAAQTARFLEHLDGLHRGS 390
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A4D9D9Q4_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9Q4_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.200e-52 Identity = 114/274 (41.61%), Postives = 159/274 (58.03%), Query Frame = 1
Query: 820 IAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIE----DVEAAAIPRI---RTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSHAPVQLVYHDKGGHCGFLAARRLASGREVKDGRWLPMELTRFVDHVE 1620
+A+AFA RG+DV A+NFRGC G N+K YHLG+TDDL+F + + P R+YLTGFSLG NVI+ LG E G+ AA GV GAAVAC PF+ S ++ T + +Y +F++ L+ KA H R E D E + R+ T DF++++V L F +YY +++++ VR+P LV+N+RDDP I+ LP P+ V V+L+YH GGHCGFL + S +D RWLP EL RF++HV+
Sbjct: 1 MAKAFARRGFDVLALNFRGCCGTENLKAYSYHLGFTDDLKFAIQRLFAEEPRR--RIYLTGFSLGGNVILKCLG-ELGEEAA-SMGVQGAAVACVPFDAVRSSSKID-TGFNRWVYAANFLSTLKVKAAKKYETHQRHREGKGVDKELYDLDRVLACSTIGDFDDEVVAKLHKFEDKIDYYRQSCSKQYLPLVRIPALVINSRDDPFINEAGLPTPED-------VGDGTVRLIYHSYGGHCGFLTGQEKTSH---EDERWLPTELARFLEHVD 259
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Match: A0A0G4FV15_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FV15_VITBC) HSP 1 Score: 193 bits (491), Expect = 2.100e-51 Identity = 119/323 (36.84%), Postives = 172/323 (53.25%), Query Frame = 1
Query: 679 GSRLEQWARGLLEGRGEGGREGAAAGRKLVVLLHGLESSSTQPLTKRIAEAFANRGYDVAAVNFRGCSGELNVKPLGYHLGYTDDLEFILAEVRRRFPGLWDRVYLTGFSLGANVIINFLGQEQGQRAAREHGVAGAAVACAPFNPAASVEMLERTRMGQLLYVPSFVNVLRGKAEAHLRMHPRAIEDVEAAAIPRIRTFSDFNEKLVKPLFGFSSVKEYYEAVDARRHISQVRVPLLVVNARDDPMISAETLPDPQXXXXXXXXVSH---APVQLVYHDKGGHCGFLAARRLASGREVKDGRW-LPMELTRFVDHVEAHLNG 1635
G R + R + EGR E + LV++LHGLES+S PL ++A AF R +DV VNFR CSGEL Y++G+T+DL+F++ R P ++L GFSLG NVI +LG G+ A GV GAAVAC PF+P A+ ++ +L+Y +F+ L+ KAE H H R + +T +F+ + P+FGF+ K+YY ++ H+ +R P + +NARDDP + E+LP + + APV+LVY +KGGHCGF + G W L E+ RF+ V+ NG
Sbjct: 101 GDRAHELHRCVAEGR----VEKPSTSDPLVLVLHGLESNSRSPLCLKMARAFHARNFDVCLVNFRSCSGELPRTVRAYNVGFTEDLQFLVERFRHITPSR--PLFLAGFSLGGNVITKWLGS-MGEEAYAVKGVRGAAVACVPFDPLAAQPKIDSPGFSRLVYTGNFLRTLKVKAETH---HQRFPGSFNLDGVREAKTIGEFDRHFIAPIFGFADKKDYYMKSASKPHLPFIRTPYMAINARDDPFVDDESLPQERHVDHVAKQHTDDVGAPVRLVYTEKGGHCGFYMGK----------GGWSLAEEMGRFLGDVDRAHNG 403 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347736 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3950 ID=mRNA_3950|Name=jgi.p|Trimin1|347736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2115bp|location=Sequence derived from alignment at Contig_15:884603..891241- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGAACCTCACTCGCGTCGCGCAGCTATCGCTGGGGCTGCTTTCACTback to top protein sequence of jgi.p|Trimin1|347736 >Trimin1|347736|estExt_Genemark1.C_Ctg_150097 ID=Trimin1|347736|estExt_Genemark1.C_Ctg_150097|Name=jgi.p|Trimin1|347736|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=705bp MANLTRVAQLSLGLLSLRMNGSQAFAGVLQRSGARVGVPSVSPPVADAGIback to top mRNA from alignment at Contig_15:884603..891241- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3950 ID=mRNA_3950|Name=jgi.p|Trimin1|347736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6639bp|location=Sequence derived from alignment at Contig_15:884603..891241- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_15:884603..891241- >mRNA_3950 ID=mRNA_3950|Name=jgi.p|Trimin1|347736|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2115bp|location=Sequence derived from alignment at Contig_15:884603..891241- (Tribonema minus UTEX_B_3156 )back to top |