mRNA_3902 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347715
Unique NamemRNA_3902
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA)

HSP 1 Score: 867 bits (2239), Expect = 6.980e-314
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 3 
Query:  237 AGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG 1556
            AGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG
Sbjct:   12 AGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG 451
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A835Z9U4_9STRA (U2 small nuclear ribonucleoprotein auxiliary factor large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U4_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 1.580e-137
Identity = 220/265 (83.02%), Postives = 231/265 (87.17%), Query Frame = 3 
Query:  564 LKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALG--TPA-APTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKL 1349
            LKIGRPSKYRGPPV   TWQ LTGQ  L      P  G   SGLDPATKVYRELY+GN QPTMTEA+IAEFLGTTLQKVGLAT+APGNPVV+ARS+GNF FIEMRSIED NAMLNLNGIPFMGSTLRI RPAKY GPMTPAMTWPD+LARLVAQGG A   LG  +PA A  QPATRVLRLNNMLSA+DLADEEGLADIEEETKGECA+FG VKKVHIVRPSTTDA AEKTATGVGYVFVEFEEADAARKAMLSLSTRTFD K++
Sbjct:    2 LKIGRPSKYRGPPVPSKTWQELTGQTPLPSIAAQPAGG---SGLDPATKVYRELYIGNTQPTMTEAAIAEFLGTTLQKVGLATAAPGNPVVLARSNGNFCFIEMRSIEDTNAMLNLNGIPFMGSTLRIGRPAKYPGPMTPAMTWPDILARLVAQGGAAALGLGGGSPAPAAHQPATRVLRLNNMLSAEDLADEEGLADIEEETKGECASFGAVKKVHIVRPSTTDANAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDGKRV 263
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 325 bits (832), Expect = 9.170e-101
Identity = 180/343 (52.48%), Postives = 226/343 (65.89%), Query Frame = 3 
Query:  333 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            DK   ELFVGNTPP TSE VL+ FLNAA+ QV L TAPGNPI+ CRVSNKFAFIELRS +ETNNCLSLN IPFMG  LKIGRP+KY GP +  +TWQALTGQ    G ++          +DP+TK+YRELY+G+    MTE  + EFLGT +Q+VGL T   GNP+V  R SG F+F+E+RSIE+AN  LNLN IPFMG  L+I RP+KY GP  P + W DVLA+ +A     +   G  AA  QP +RV+ L+NM++ D+L D+    +I E+T+ EC  +G V+ + I RP            GVG VF+EF     A KA+ +L  RTF   K+ + Y
Sbjct:  203 DKAFRELFVGNTPPGTSELVLMEFLNAALNQVKLTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQQAPEGASV----------VDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGL-TLQEGNPIVQVRHSGTFAFVELRSIEEANNCLNLNSIPFMGQFLKIGRPSKYPGPQVPHLNWEDVLAKYMA----GEMPTGGGAAQQQP-SRVIALSNMVTTDELMDDTTYQEIVEDTRDECGKYGAVQSMEIPRPGAPH--------GVGKVFIEFTSTADAAKAIGALKGRTFAGNKVDARY 521
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 296 bits (759), Expect = 1.080e-89
Identity = 171/368 (46.47%), Postives = 223/368 (60.60%), Query Frame = 3 
Query:  333 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPA-------------------------TRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            DKT+ ELFVGNTPP TSE VL+ FLNAAM QV  N   GNPI+ CR+S KFAFIELR+ +E NNCL+LN IPFMG  LK+GRP+KY GP     TWQ LTGQ         P A  +   +DP TK+YR+LYVGN  P MTE ++ EFLG+ +++VGL     GN ++  R SG F+FIE+RS+E+A+ M+NLNGIPFMG  L+I RP KY GP  P + W D+LA+ +A  G        PA    PA                         ++V+ L+NM++ DDLAD+E   +I E+T+ EC+ FG V+ + I RP            GVG VFV +   + A+KA+ +LS RTF    + + Y
Sbjct:   53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQ--------APPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL-NQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMA--GELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPH-------GVGLVFVHYSSEEEAKKAIDALSGRTFAGNTVEAKY 402
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK)

HSP 1 Score: 286 bits (732), Expect = 2.110e-87
Identity = 164/349 (46.99%), Postives = 212/349 (60.74%), Query Frame = 3 
Query:  333 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPA-------------------------TRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARK 1304
            DKT+ ELFVGNTPP TSE VL+ FLNAAM QV  N   GNPI+ CR+S KFAFIELR+ +E NNCL+LN IPFMG  LK+GRP+KY GP     TWQ LTGQ         P A  +   +DP TK+YR+LYVGN  P MTE ++ EFLG+ +++VGL     GN ++  R SG F+FIE+RS+E+A+ M+NLNGIPFMG  L+I RP KY GP  P + W D+LA+ +A  G        PA    PA                         ++V+ L+NM++ DDLAD+E   +I E+T+ EC+ FG V+ + I RP            GVG VFV +   + A+K
Sbjct:   53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQ--------APPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL-NQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMA--GELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPH-------GVGLVFVHYSSEEEAKK 383
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S2HGX3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGX3_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.170e-83
Identity = 160/369 (43.36%), Postives = 215/369 (58.27%), Query Frame = 3 
Query:  303 VTPGAFTPV---------PDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPAT-KVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVA------QGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            V PGA  P+          DK   ELFVGNTPP TSE +L+ FLN AM +  +  A   PI+QCR + KFAF+E  S+ E N  L+LN IPFMG+ L++ RPSKY GP V   TWQ LTGQ   AG T +P          PA  KV REL++GN  P MTE  + +FLG  +++VGL+   PGNP+   R SG F+FIE+RS E+A   LNLN IP++G+ LR+ RP+KY G  T    W D+LA+ ++        GGA  A  TPA      TRV+ L NML+ ++L  ++   +I E+TK EC+ FG +K + I R             G   +F+E+   D A KA+  L+ RTFD +K+ +V+
Sbjct:   11 VVPGAAAPLMVSPAVAAAQDKVNRELFVGNTPPGTSETLLMAFLNGAMRRTKICAADATPIIQCRTNQKFAFVECASIQEANLALNLNGIPFMGSSLRVSRPSKYAGPHVASKTWQELTGQALPAGLTPVP------ENTSPAEDKVNRELFIGNTTPEMTEGMLTDFLGKAMEQVGLSNQ-PGNPITACRVSGKFAFIELRSKEEAANALNLNNIPYLGAQLRVGRPSKYTGVQTSHGNWEDILAKYMSGELKLPSQGGAPAAAATPAEDVGSPTRVVELKNMLTKEELTSDQDYEEIMEDTKEECSQFGSLKNLVIPRDGP----------GATKIFLEYLSTDDAAKAIQGLAGRTFDGRKVEAVF 362
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4RDP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDP7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 1.930e-82
Identity = 157/354 (44.35%), Postives = 210/354 (59.32%), Query Frame = 3 
Query:  321 TPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPAT-KVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVA------QGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            T   DK   ELFVGNTPP TSE +L  FLN AM +  L  A   PI+QCR + KFAF+E  S+ + N  L+LN IPFMG+ L++ RPSKY GP V   TWQ LTGQ    G T +P          PA  KV REL++GN  P MTE+ + +FLG  +++VGLAT  PGNP+   R SG F+FIE+RS E+    LNLN IP++G+ LR+ RP+KY G  TP   W D+LA+ ++        GGA  A   PAA T   TRV+ L NML+ D+L  ++   +I E+TK EC+ FG +K + I R             G   +F+E+   D A  A+  L+ RTFD +K+ +++
Sbjct:   88 TAAQDKVNRELFVGNTPPGTSEALLTQFLNGAMRRTKLCAADAMPIIQCRTNQKFAFVECASIADANLALNLNGIPFMGSSLRVSRPSKYAGPHVPSKTWQELTGQTLPVGLTPVP------ENTSPAEDKVNRELFIGNTTPEMTESMLTDFLGKAMEQVGLATH-PGNPITACRVSGKFAFIELRSKEETANALNLNNIPYLGAQLRVGRPSKYVGAQTPHGNWEDILAKYMSGELKLPSQGGAPAAAPAPAANTGVPTRVVELKNMLTMDELTSDQDYEEIMEDTKEECSQFGSLKNLVIPRDGP----------GATKIFLEYMSTDDAAAAIKGLAGRTFDGRKVEAIF 424
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A6U2QA35_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2QA35_9STRA)

HSP 1 Score: 275 bits (704), Expect = 3.580e-82
Identity = 168/380 (44.21%), Postives = 222/380 (58.42%), Query Frame = 3 
Query:  249 GQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLAR-------LVAQGGGADK--ALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            G    G+ P + N+L QA    A     +K   ELFVGN PP TS+ +L  FLN AM +  L      PI+Q RVS KFAF EL S D+ N  L+LN IPFMG  L++ RPSKY GP V   TWQ LTGQP  AG   +P      +G     K+ REL+VGN  P MTE S+ +FLG  L++VGL  S PGNP+   R SG F+FIE+R++++A   LNLN IP+MG+TLR+ RP+K+ G  TP   W D+LA+       L AQ G A    A   P  PT   T+V+ L NML+ +DL  ++   +I E+TK EC+ FG + KV I R          +  G G +F+++  A  A KA+  L  RTFD +K+++VY
Sbjct:  135 GXXXXGLPPGVPNLLVQAQAQQA-----EKINRELFVGNIPPGTSDMLLREFLNGAMRRTGLCAPNATPILQVRVSPKFAFCELVSYDDANKALNLNGIPFMGIALRVSRPSKYTGPYVPSKTWQELTGQPLPAGMQSVPA-----NGPPGEEKINRELFVGNTTPEMTEESLKDFLGKALEQVGLVNS-PGNPINSCRMSGKFAFIELRTVDEAKKALNLNNIPYMGATLRVGRPSKWTGEHTPHGNWEDILAKYMSGELQLPAQPGHAPPVPAPKAPDVPTATQTKVVALTNMLTKEDLQSDQDYEEILEDTKDECSGFGSLVKVEIPR----------SGPGEGKIFLQYVSASDATKAIEGLRGRTFDGRKVAAVY 493
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.020e-80
Identity = 158/353 (44.76%), Postives = 223/353 (63.17%), Query Frame = 3 
Query:  333 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQ---------GGGADKALGTPAAPTQ-PATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            DK   ELFVGNTPP TSE +L+ FL+ AM +  L    G+PIV CRV+ KFAF+E  +VD  N  L+LN IPF+G+ LK+ RPSKY GP V   +WQ LTG   L  G  + GAGG+++G     K+ REL++GN  P MTE  +++FLG  +++VGL+  APGNP+V  R+SG F+FIE+R+ ++A + LNLN IP++G+ LR+ RP+KY GP TP   W D+LA+ ++          GGGA  A   PAAP    AT V+ L  ML+  DL +++   +I E+T  EC  FG +K+V I R          +  G   +F+E+   + A +A+ SL+ RTFD +K+++VY
Sbjct:   84 DKVNRELFVGNTPPGTSEMLLIQFLSGAMRRTGLCKPSGSPIVTCRVNQKFAFVECATVDCANRALNLNGIPFLGSCLKVSRPSKYAGPFVPSKSWQELTGT-ALPNG--LAGAGGALAG-SAEDKINRELFIGNTTPEMTEQMLSDFLGKAMEQVGLS-KAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDILAKYMSGELQLPSKDGGGGAAPA---PAAPHAIDATCVVELCQMLTQQDLENDDEYKEILEDTTEECGQFGSLKRVVIPR----------SGPGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVY 418
[Close]
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: K0SQC2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQC2_THAOC)

HSP 1 Score: 258 bits (660), Expect = 1.600e-76
Identity = 153/368 (41.58%), Postives = 212/368 (57.61%), Query Frame = 3 
Query:  336 KTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLAR-----------------LVAQGGGADKALGT---------PAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 1361
            K   ELFVGNTPP TSE +L+ FL+ AM++VNL      PIV CR ++KF FIEL +VD  N  L+LN IPF+G+ L++ RPSKY GP V   TWQ LTGQP   G   +P   G    L    K+ REL++GN  P MT   + +FLG  +++VGL+T  PGNP+V  R S  F+FIE+RS+++A   LNLN IP++G+ LR+ RP+KY+GP TP   W D+LA+                 LV Q      A  +         P A     + V+ L +ML+  DL D+    DI E+T+ EC++FG +K + I R             G   +F+E+  A+ A KA+  L+ RTFD +K+++VY
Sbjct:   67 KLSRELFVGNTPPGTSEALLMQFLSGAMSRVNLCPPDVTPIVTCRKNDKFCFIELATVDLANKALNLNGIPFLGSSLRVARPSKYSGPHVPSQTWQQLTGQPLPPGMAAVPENTGVTMALSGEDKLSRELFIGNTTPEMTAEMLRDFLGRAMEQVGLSTM-PGNPIVTVRPSAKFAFIEVRSMQEAANALNLNNIPYLGAQLRVGRPSKYSGPETPHGNWEDILAKFMSGELHLKNNATQANPLVQQAHAVAAAASSLAPSLASVPPLASKASPSPVVELRHMLTQQDLDDDNEYNDILEDTRDECSSFGTLKNIVIPRKGP----------GATKIFLEYMTAEDAGKAIAGLAGRTFDGRKVTAVY 423
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347715 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHK3_9STRA6.980e-314100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9U4_9STRA1.580e-13783.02U2 small nuclear ribonucleoprotein auxiliary facto... [more]
A0A7S2V6E6_9STRA9.170e-10152.48Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S4D6W7_HETAK1.080e-8946.47Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3XTW3_HETAK2.110e-8746.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2HGX3_9STRA2.170e-8343.36Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4RDP7_9STRA1.930e-8244.35Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U2QA35_9STRA3.580e-8244.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4I336_9STRA1.020e-8044.76Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0SQC2_THAOC1.600e-7641.58Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:458023..466168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347715|estExt_Genemark1.C_Ctg_150049
DescriptionRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
COG categoryA
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG0120@1|root,KOG0120@2759|Eukaryota,2XDBR@2836|Bacillariophyta
Evalue4.5e-78
Seed ortholog159749.K0SQC2
Hectar predicted targeting categoryother localisation
TranscriptId348037
TrackFilteredModels1
ProteinId347715
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347715gene_3902Tribonema minus UTEX_B_3156 geneContig_15 458023..466168 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347715Trimin1|347715|estExt_Genemark1.C_Ctg_150049Tribonema minus UTEX_B_3156 polypeptideContig_15 458433..466168 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3902_1exon_3902_1Tribonema minus UTEX_B_3156 exonContig_15 458023..458089 +
exon_3902_2exon_3902_2Tribonema minus UTEX_B_3156 exonContig_15 458297..458528 +
exon_3902_3exon_3902_3Tribonema minus UTEX_B_3156 exonContig_15 458998..459123 +
exon_3902_4exon_3902_4Tribonema minus UTEX_B_3156 exonContig_15 459684..459773 +
exon_3902_5exon_3902_5Tribonema minus UTEX_B_3156 exonContig_15 460314..460556 +
exon_3902_6exon_3902_6Tribonema minus UTEX_B_3156 exonContig_15 460985..461023 +
exon_3902_7exon_3902_7Tribonema minus UTEX_B_3156 exonContig_15 461476..461622 +
exon_3902_8exon_3902_8Tribonema minus UTEX_B_3156 exonContig_15 461842..462243 +
exon_3902_9exon_3902_9Tribonema minus UTEX_B_3156 exonContig_15 464919..465065 +
exon_3902_10exon_3902_10Tribonema minus UTEX_B_3156 exonContig_15 465908..466168 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_3902UTR5_3902Tribonema minus UTEX_B_3156 five_prime_UTRContig_15 458023..458089 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3902CDS_3902Tribonema minus UTEX_B_3156 CDSContig_15 458433..458528 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3902 ID=mRNA_3902|Name=jgi.p|Trimin1|347715|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1754bp|location=Sequence derived from alignment at Contig_15:458023..466168+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGACAGGAGGCGCAGGCGTAGCCGCTCCAGGGAGGACAGCAGGTCCCGT
TCTAGGGAGAGACGCAGCGATGGACATAGGAGGCGACGCCACAGGAGCCG
CAGCAGTAGCGGCAGCCCTGCCAGAGTCAGAGATCAGTTTACCCCCTCAA
TCCCCACCGCTGTCAGTGCTGGCCTAAGCGCTTATGGAGTGCCTGCCCCT
GGTATGCCCACGCCAGGCATGCCGATGCCAGGCATGGCTGGGCTGTACGG
ACAAGCCGCGATGGGGATCAATCCCATGATTGCGAACATGCTGCAGCAGG
CTGTCACTCCTGGCGCGTTCACGCCAGTGCCTGACAAAACGCAGCTGGAG
TTGTTTGTTGGCAACACGCCACCGAACACTTCGGAGTTTGTCCTGCTCAA
TTTCCTCAACGCAGCAATGGCTCAGGTCAACCTCAACACGGCTCCAGGCA
ACCCCATTGTCCAGTGCCGTGTCAGCAACAAGTTCGCATTCATCGAGCTG
AGGAGCGTAGATGAGACCAACAACTGCCTCTCACTCAACCAGATCCCATT
CATGGGCACACCTCTCAAGATTGGACGCCCCAGCAAGTACCGCGGCCCTC
CTGTTAACTGCACAACTTGGCAGGCGCTGACGGGACAGCCTGAGCTGGCT
GGTGGGACCATGATGCCTGGTGCTGGAGGCAGCATGTCAGGGCTTGACCC
AGCAACTAAGGTGTACAGGGAGCTGTACGTGGGCAATGTGCAGCCTACCA
TGACTGAGGCATCCATTGCAGAGTTCCTCGGGACAACGCTGCAGAAGGTT
GGACTGGCAACTTCTGCCCCGGGCAACCCTGTGGTCATTGCGCGTTCCAG
CGGCAACTTCAGCTTCATTGAAATGCGCTCAATCGAGGACGCCAATGCCA
TGCTCAACCTCAACGGAATTCCATTCATGGGCAGCACTCTCAGGATCAGC
CGCCCGGCCAAGTACGCAGGGCCCATGACCCCCGCCATGACGTGGCCTGA
CGTGCTGGCCCGTCTTGTTGCCCAAGGCGGCGGGGCAGACAAGGCCCTTG
GCACGCCAGCTGCGCCCACGCAGCCCGCAACACGCGTGTTGAGGCTCAAC
AATATGCTGAGCGCTGATGACCTGGCTGATGAAGAGGGGCTGGCAGACAT
TGAGGAGGAGACCAAGGGGGAGTGCGCGACGTTCGGGCCCGTGAAGAAGG
TGCACATTGTGCGGCCCAGCACTACGGACGCGGCTGCGGAGAAGACTGCC
ACGGGCGTGGGGTATGTGTTTGTGGAGTTTGAGGAGGCGGACGCGGCCAG
GAAGGCCATGCTCAGCCTGAGCACGCGCACGTTTGACAACAAGAAGCTCA
GTTCTGTGTACAACACCTTCGAGTGCTGCACGGGCGAGCGGCAGGAGGAG
GCAGCGAAGGAGGAGCCGCTGGCGGAGCGGCGGCGCGGAAGGCGAGGATG
CACAGGGGACACTGAGGGCACAGCAGCACCGCACGCTCAACCTACGCCGC
CATGGTGTTGGCCGTTGGGTACGCCTAGTGATACCGCCGCCGCCACCGAT
CCCGGGCCCGCCGCCAATCCCGGGCCCGCCGCCGATCCCGGGCCCGCCGC
CGATCCCGGGCCCGCCGCCGATACCGGGCCCCCCGCCGATACCGGGCCCG
CCGCCGATACCGGGCCCACCGCCGATACCGGGCCCGCCGCCGATACCGGA
CCCGCCACCGATACCCGGCCCGCCACCACCTCAGCTGATGGCCCAGAGCT
CTAG
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protein sequence of jgi.p|Trimin1|347715

>Trimin1|347715|estExt_Genemark1.C_Ctg_150049 ID=Trimin1|347715|estExt_Genemark1.C_Ctg_150049|Name=jgi.p|Trimin1|347715|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=517bp
MPTPGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLEL
FVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELR
SVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAG
GTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVG
LATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISR
PAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNN
MLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTAT
GVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEA
AKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDP
GPAANPGPAADPGPAADPGPAADTGPPADTGPAADTGPTADTGPAADTGP
ATDTRPATTSADGPEL*
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mRNA from alignment at Contig_15:458023..466168+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3902 ID=mRNA_3902|Name=jgi.p|Trimin1|347715|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8146bp|location=Sequence derived from alignment at Contig_15:458023..466168+ (Tribonema minus UTEX_B_3156 )
GTGACAGGAGGCGCAGGCGTAGCCGCTCCAGGGAGGACAGCAGGTCCCGT
TCTAGGGAGAGACGCAGGTTCGTGGCCGCCACCCTTACACGAGTTTTTTT
TTATGGATCCGCTTCGTTTTGCCTGGACACCCAGTGCCTGCTGGATTGCC
CTGCCCTGCCCTGCGAAAGGCGAAAGGCGGCGTGCACATCTTTCATATTT
TGTATGCAATACCTTTGATCCGGCCTTTTCTCTTGATGTTGACCTCTTGT
TTCGTTGTGCCCGTCTTCTTGCAGCGATGGACATAGGAGGCGACGCCACA
GGAGCCGCAGCAGTAGCGGCAGCCCTGCCAGAGTCAGAGATCAGTTTACC
CCCTCAATCCCCACCGCTGTCAGTGCTGGCCTAAGCGCTTATGGAGTGCC
TGCCCCTGGTATGCCCACGCCAGGCATGCCGATGCCAGGCATGGCTGGGC
TGTACGGACAAGCCGCGATGGGGATCAATCCCATGATTGCGAACATGCTG
CAGCAGGTGAAGATCACACCGTGTAGAGCGTCCGGTTTGAGCAAAGTCTG
TGTCATGAATAAGCCCATCGGCATCACTGACGTTCGTCTTGTTCTCCAGA
TCATCACTGCACCAGCCAGCCAGAGAGCTTTGACGGATCATATTGCAGGT
GCACAGGACGACGGTGATGTCCATCTGCCAGTCTGGCTTCTACCTGATTG
TTTGAATCAGAGATACCAATCTGCGATTCATCAAGAACCAAATTTGGGTT
GCAATGCTCAGCTTGGTTGCTCTCCGTCAGTCCATGGCGTTGACTTGTTT
TGATGAAGGCAGGTGGCTGTCAGACGTCGCGGAGCATTACATTATGCCGG
CACACTGCTTTACCATCACGCCACAAATTTTGTTGATTTGAAGGATGGGA
AGGCCATCATATTCAATTGGGTAACATTCTGATGCCGTGGCACTGACTGA
TGTGTTGCCTTGTTGATTGCCCCAGGCTGTCACTCCTGGCGCGTTCACGC
CAGTGCCTGACAAAACGCAGCTGGAGTTGTTTGTTGGCAACACGCCACCG
AACACTTCGGAGTTTGTCCTGCTCAATTTCCTCAACGCAGCAATGGCTCA
GGTATGTGAGGTTCTGCTTGCTCGCCCATTTCAGGTGCCAAGTCTTGCCA
CTGCAAGCAACTGGATTGGTCAATGGGGGGCTTTCTGTACTCACAATGCA
TGCATGATTGCCAGCTCGCAAACTCTGATGACAGGTGATGGCTCTAGGTC
ATGGCGCAGGTCTACGCTTGTTTGCCACATGCTGCCGCATTGCGCGTGTT
GATGCAGAGTAGCGCAGCAGCCTCACCACAACTTTCTGCAATTTCACTCT
TTTGTTAACTCTTGCTCAGCAGCACGAAGTCTGCATCCGGCTCTTTGCTT
CCGTTTGTTCAACTTAATACATAGCGGATTTAATCTTGGCTAGCCAAGCC
ATAGCCGTTGCCGTACCTGCGCTGATGCTCGATACTAGAAGCTTGCTCGT
GCTGGTGATGGCTCTATGGATTTTTAAACATCCACGTTTAGATGTTCTTG
TCGGCAGCTTGGCAGGTCATCTGCTTGCCAACAGGTCAGACAGAACTCGT
TTCTGCGTACACGCATTGATGATGATTGTGTTTTCTTCCCTGCGTGCTGT
GTTGTCGCCAGGTCAACCTCAACACGGCTCCAGGCAACCCCATTGTCCAG
TGCCGTGTCAGCAACAAGTTCGCATTCATCGAGCTGAGGAGCGTAGATGA
GGTGAGGCAGTTTTTGAAGATTGCATGGTATTGACATGCTTGCCGGCCTC
CCTCCTTTTTCACTCTTGTTCAAGTACGCTCAAAAGTCATGACATCACAT
CTCAGATGCGCATTCACATGCAAGCTCTCAGCTACTCATTCAGCTCCTCA
TTCCGGTCTTTAATCGATGAATAAATCGATGCTGTATAGCAGGGCTGATG
TTACCAGTTCAGTGCTCAAGGATCGTGCTCTGCGGTGTGTTTTGCAGTCT
CTTCATTGTTTTGCTGTATGAAATGCATGATGTCTGGCTGCATGCATCAA
GGTTGCATCCAGCAGCCCGTGTCGCATTTGCATTTGCACCTGCAGGTTCA
GTTTTGTGTTTGAAATCTGAGCTCACTTGTTGAGGACGACTTGTGCATTA
TTAGCTGGCATGAAGCATCATCAATCTCCACATTACACATATCATTCTTG
CTGTCCACCAGCTATGAGACGTACCACAGCTTGGTAGTGCGTTCTGGCAT
TACTCACCTCCCGCTTACTTGCCTTGCTTGTCATTTTGCAGACCAACAAC
TGCCTCTCACTCAACCAGATCCCATTCATGGGCACACCTCTCAAGATTGG
ACGCCCCAGCAAGTACCGCGGCCCTCCTGTTAACTGCACAACTTGGCAGG
CGCTGACGGGACAGCCTGAGCTGGCTGGTGGGACCATGATGCCTGGTGCT
GGAGGCAGCATGTCAGGGCTTGACCCAGCAACTAAGGTGTACAGGGAGCT
GTACGTGGGCAATGTGCAGCCTACCATGACTGAGGTGCGTACGCCAGATC
ATGGCATAATGTGAGAGTTTGAAGGACGTCAGCACGGACTTGCTTTGAAA
GAGCTGAAGCATGCAGTCACCAGTGGTGGCTGGCAATAATGCGTGCGCTG
CACCGGTGAAGTAGATGGCTCTGCGGTGGAAAGCTAAGCTTGTGAGATTG
CACATGTGTCTGCTCACCCTGCAGGCAGGATTATTCGGTTGGCGAAAGCT
CTCATATGCTTGCGGCATGCATGGTGGTAATGATTTTCAGCAACTGCTCT
GCTTCATCTAGTTGCACGTGGTGGAACATGCAAGTCGACAATCGTTACAA
TTGAGCACGAACAGTTATTTGTAGTTAATATTTTTTCTTCTCATTCATGG
TTTGATCATCCAGCTTTACAGCGATTTATTAAGTGTTGTTCCATTGGCTG
TCTCTCTTGCAGGCATCCATTGCAGAGTTCCTCGGGACAACGCTGCAGAA
GGTGAGGGTGCAATGCGCTTGTGGGGAGTACCCTGTGTGCCACCTGCATG
AAGCAAACTCGCTTGCAAATTATTACGGCGTCCACAGCATTGAAAACTGT
AGTTTCATGGGCCAGTACTGAGTACATATTGAAACGTTACATGTAAGATG
ACCATTTTGCCTCATTTAGGGTGCATTTTGATAAGACCAACATTATCTTA
TCTGGTGGCATGTGCGTTTATGTGGTCGCACTGTGTGGAGTGCCTCCATT
ACTGAATGCTTGTTTGACAGCCAACAACCAAGCACTTTTTCAACCGCTAA
GTGCTATTGATGACCCACATTCAAATACGCCACCATCAAGGCTAATGTTG
TGCTTTGAGCGCCTGTTTTCGCTCACGCTTTGACAACTGTTCTTGCACCT
GGTATGATCATATTTGCATAGATGCTCACATTTTTGGTTCACTTTTTCGG
CAGGTTGGACTGGCAACTTCTGCCCCGGGCAACCCTGTGGTCATTGCGCG
TTCCAGCGGCAACTTCAGCTTCATTGAAATGCGCTCAATCGAGGACGCCA
ATGCCATGCTCAACCTCAACGGAATTCCATTCATGGGCAGCACTCTCAGG
GTGAGTGGGGCATGGCATGTTGCGCTGCACTGGAGTGCAATGTTGAATGC
ATCGCCCATCAGTTCGTCATCGACCAACAACGATGTGCCACGCCATCGAA
GCTGCATGAGTCATGTCTGACGCCTGACGTACCACCATTGTCTCACACAT
TGACTACTGCCATGGCACGTTGGACACAATTTCTCACGTCACCTTCGCTC
GCTCCTCTGAGCACTGCAGATCAGCCGCCCGGCCAAGTACGCAGGGCCCA
TGACCCCCGCCATGACGTGGCCTGACGTGCTGGCCCGTCTTGTTGCCCAA
GGCGGCGGGGCAGACAAGGCCCTTGGCACGCCAGCTGCGCCCACGCAGCC
CGCAACACGCGTGTTGAGGCTCAACAATATGCTGAGCGCTGATGACCTGG
CTGATGAAGAGGGGCTGGCAGACATTGAGGAGGAGACCAAGGGGGAGTGC
GCGACGTTCGGGCCCGTGAAGAAGGTGCACATTGTGCGGCCCAGCACTAC
GGACGCGGCTGCGGAGAAGACTGCCACGGGCGTGGGGTATGTGTTTGTGG
AGTTTGAGGAGGCGGACGCGGCCAGGAAGGCCATGCTCAGCCTGAGCACG
CGCACGTTTGACAACAAGAAGGTGTGTTTGTGCTTGCAAAAGTGCTGGTG
CTGATGACAATGATGGCAATAGTGACACCTGAAGGAGCTCCTACATTCAC
CAGCATGAATGTGGCACTGATTTCGAGTGCAACATTCACTGTCAAAGCAC
AGAACATGGATGCCAGCAAATTGGTGCATATCTGAACAGATGTCATTGCT
GCATTTAGGAAGCATACCGTGGTCGGCGGCTGCTGTTGGGACTTACTTCG
GTTATTCGCCTGCATATCCAGACTACCAGCCTTCTACCTCGAAGTATACA
CCAAATTCCAGCACAGGTTAACCATGCAGCTGATGATGAAACACCAGCAG
ATGCAGCGGCAGAGTTTATGCACCTGCTGCTGTACTAGAGATGCCTTCAA
AGTGCTGCCTCCTGCTCATGTAGTCTGCAGAACCTTGCTATGTCTCTTCA
AGTGATGGTGTGTAATGGAGTGCAACACCTCTTGCACGGACATGGTGCCA
TGCTCATATCATTTTGATGTGGGCGCTCGCTACTTGATGTGGATTTGACT
CTGATTTTAAGTGGTATGTTCTAGCTGCGTTACATGACTTTGTGCTCTAA
GCAATCACTGATGCTCATGTTGTACCCTGCAGGTGGAGGTGACGTTTTGG
CCAGAGGAGAAGTTTGCACAGGGTGACTATGGCGACGGCCCCTAGAGCGC
AGCTCAAGCAGAACCATTCAGGTCGGCGCAATGCGCATTCGAGCGTGCAT
GAGTAGACAGCTCGTTGTGCAGCGTCTGCCTTGGCTGACATGCTGTGTGT
GGAACAAATGGGGTAACTGATGGAATGCCTGCACGTTGTGCTGCATAACA
TTCAGACATGCATCATTTTCACAAGGCGGAATTGTGGCGGCAGGTTGACC
TGGGATCGCAATATCAGGCCTTGCTGCGAAATCAGATGTGCATGACTCTC
GGTCTTGACTGCCGGCTAGCCTCAGCAGTTGTATTGTAGCATGCAGTGAT
GGTGTTGACGGGCACACAGCTGTCTGCTTGGATGACGCTGATCGCAGCAG
AGGTCCATCTCAGCTGTTGCATGTTGCAGCTGCCATTGCTGCAAGCATCA
ATGCCCAATTTCTATAGCATGCAGACTTCGCACCCACTAAGCCTGCACTC
TGTGCGTGTGTGTGCGTGCTGGTGCCATGTTGTGTTGTGTCTGTTGCTTG
TGTCGTTTGTGTTGTTGTGTCGGTTGTGCTTGTCTGCTGCTGTGTTGCTT
TGTCAGTTGACTGTGCTGCTGGGCGCCTGCAGATGGTGCTACTGGCAGAG
ATTCAACGCGCAGTAAGTATCGCCCACAACATCTGTTGCATGCATGATGA
CAGTTTATTCTGTGCATATCACTGTTTACATGCAGCTTGTTGTCTGCATG
GAGCCCTCCAAGTCATACAACAGGCATCGTTGACATTGCGGATGGACAAC
CACCATGCTTGTCACTTACACGACGTAGATTGGTGGCAGCAGCTGCTGAA
GTGTTTTTCTGCCTGACATGTACAAGCTGTAGCTTCCCGTCGAGCTTCAT
GTCATCTACAGCGGTTCATCTGACTTCATGTTTGTTCTACATGCATGCTT
GAGCGACACTGAGTTGCGTCGATGACGTCCACAGTGACTCTGAGTTGCGT
CGATGACGTCCACAGTGACTCGCAAAGCGAAGATGAATCTTCAGATTTGC
CCACGAGCATACGCATCAGCCACTCCACCTGCACAAGATATTGCATGCAT
GACTGCCGCTTAGCTGCCGCAGCAGTGCCATTGATGCAATATCTGACCAA
GATCATTCCATTTTGCCGCTTGAAGCGCATGAGTGCGGCTTATTGTGTTT
CGGCAGTATATTGTATAAGCTTGTCATGACTGGACGTGTATAGATGCGTT
CCACCGCCGTGCCAGCGCAATGTTTTCTACAATTTACTTCCCAAGACCTC
CATCCTGGTGCACCTCTTTACCGTGTGTGTGTGACCCTGCCGTGAGCTTT
GCATGTCATGAAACCCACAGTGCCATAGGCTAATGGACAGATATAATGGC
TCCTGGAAGCGAGTTCGTCTTGTGAGTCCACTTGCATTGCACACAGAAGC
AAGCATTTACTGCATGTGTAGAGCCTGTGCATGTTCGCTGTATCCAGTGG
CGTGTATGCACTGTTGTTGTTGCATGCATTCTAGCCATTGGTGTGCATCA
CTGATGAGCTTCCCAGGATGTGGGGTAACCTAAGCTGGAGCTGCCAGGTC
CACAAACAAGATGACAGCACCAGCTCTTGGCGGCTGATTGCCGAGTGATG
TTTTTTTTTTGTCAAAAAAAGCAAGAGAGAGAGATATGCACTTGACTATT
TGCAAATGCTGGCATCGAGGGCACCGAGGCCCCAAGGAGCCTCGTGATGT
GCGTGCCAACCAACCAGAACAAGGGAACACACCCCTAGAGAAGGGACTCG
TGCATACACGGGCCCCCACACACACAGACTCCAACAACCACTCCCTGTTT
GATTGTCTTGGGGGTGTTCTTTCAAAAACATATTCCTGGCAACATACGTT
GGGGTGCTATAGCCGGTTGCACAACGTTTAGGCGGCAAGTACACACAACA
GAGCACTCATTGATGATTCGCATGAGCAGACCAAGGGCAGGACATGCGTT
GCTCCCTCGTCTCCCATCCCGCCTGTCTTTCCAAGTTGCCCCTCAGCTCA
GTTCTGTGTACAACACCTTCGAGTGCTGCACGGGCGAGCGGCAGGAGGAG
GCAGCGAAGGAGGAGCCGCTGGCGGAGCGGCGGCGCGGAAGGCGAGGATG
CACAGGGGACACTGAGGGCACAGCAGCACCGCACGCTCAACCTGTCGGCC
TGGCTACAGCCGAGGACTAGAGAGCGGATTTTCGCTCCACCGCGGGCCTG
AGGCGAACAAGGCCAGACACGCAGCGTGGGTCGCCGGTGTAAGCAAGTAA
GCCTCGCATTGATATTGCTAAAGCTACCTACGCACACAGCGACATCGGCC
GAAGCACAAGAAGGGCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CATCAGACGATATCGCCGTCGACGGATCGGGAAGGGGGAACCTAGGGCAC
ACTGGATCGCAGGGCAGTAGATAGCACTTCACCAGATTAAGGTTTGAACG
CTTGCTGACCAGCTTGATTTGCAGCCGCACAAGGGACCCCGCCTGGCAGA
GACTGACTGCATTCAGCACACGCACAGACACGACAGGACCACGACACTGC
AGCGGCAAGGACACGAAGTGCACAGCATTGCATTCAGCCCAGCTGCCTTG
TGTTGGTCAGAGGCAGAGAGCTTGAGCACACCGACTCGTTCCACCACCGC
TCGTTTCACGACGGCGGGAGAAGCACCTCAACAGATACACCAGAGCAGGA
CGGGATCTTGAACTGAAAGTGGTATAGTTGTGCAGGGGAGTGTTCGCGGT
AGGCAGCCGCGCATTCGAGACCGAGCCTGGGCTTTTTTTTTTTTTTTTTT
TTTTTTTTTTCTCGCGCCTCAAAGTCGCCTTTCAAAGCTATGGCTCTCCA
CTGGCTTACCAGCCCTGCCTCACGTGGGGAGGGGTCACCTCTGAAACGCA
AACGGGAACAGCGCAACCACGGGCTGAATACTGGCTTGTGGTGGTGGCAG
GTCAAAGCTGCACGCCAATCTGACACACGCCGCAGACGCCGCCATGGTGT
TGGCCGTTGGGTACGCCTAGTGATACCGCCGCCGCCACCGATCCCGGGCC
CGCCGCCAATCCCGGGCCCGCCGCCGATCCCGGGCCCGCCGCCGATCCCG
GGCCCGCCGCCGATACCGGGCCCCCCGCCGATACCGGGCCCGCCGCCGAT
ACCGGGCCCACCGCCGATACCGGGCCCGCCGCCGATACCGGACCCGCCAC
CGATACCCGGCCCGCCACCACCTCAGCTGATGGCCCAGAGCTCTAG
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Coding sequence (CDS) from alignment at Contig_15:458023..466168+

>mRNA_3902 ID=mRNA_3902|Name=jgi.p|Trimin1|347715|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1551bp|location=Sequence derived from alignment at Contig_15:458023..466168+ (Tribonema minus UTEX_B_3156 )
ATGCCCACGCCAGGCATGCCGATGCCAGGCATGGCTGGGCTGTACGGACA
AGCCGCGATGGGGATCAATCCCATGATTGCGAACATGCTGCAGCAGGCTG
TCACTCCTGGCGCGTTCACGCCAGTGCCTGACAAAACGCAGCTGGAGTTG
TTTGTTGGCAACACGCCACCGAACACTTCGGAGTTTGTCCTGCTCAATTT
CCTCAACGCAGCAATGGCTCAGGTCAACCTCAACACGGCTCCAGGCAACC
CCATTGTCCAGTGCCGTGTCAGCAACAAGTTCGCATTCATCGAGCTGAGG
AGCGTAGATGAGACCAACAACTGCCTCTCACTCAACCAGATCCCATTCAT
GGGCACACCTCTCAAGATTGGACGCCCCAGCAAGTACCGCGGCCCTCCTG
TTAACTGCACAACTTGGCAGGCGCTGACGGGACAGCCTGAGCTGGCTGGT
GGGACCATGATGCCTGGTGCTGGAGGCAGCATGTCAGGGCTTGACCCAGC
AACTAAGGTGTACAGGGAGCTGTACGTGGGCAATGTGCAGCCTACCATGA
CTGAGGCATCCATTGCAGAGTTCCTCGGGACAACGCTGCAGAAGGTTGGA
CTGGCAACTTCTGCCCCGGGCAACCCTGTGGTCATTGCGCGTTCCAGCGG
CAACTTCAGCTTCATTGAAATGCGCTCAATCGAGGACGCCAATGCCATGC
TCAACCTCAACGGAATTCCATTCATGGGCAGCACTCTCAGGATCAGCCGC
CCGGCCAAGTACGCAGGGCCCATGACCCCCGCCATGACGTGGCCTGACGT
GCTGGCCCGTCTTGTTGCCCAAGGCGGCGGGGCAGACAAGGCCCTTGGCA
CGCCAGCTGCGCCCACGCAGCCCGCAACACGCGTGTTGAGGCTCAACAAT
ATGCTGAGCGCTGATGACCTGGCTGATGAAGAGGGGCTGGCAGACATTGA
GGAGGAGACCAAGGGGGAGTGCGCGACGTTCGGGCCCGTGAAGAAGGTGC
ACATTGTGCGGCCCAGCACTACGGACGCGGCTGCGGAGAAGACTGCCACG
GGCGTGGGGTATGTGTTTGTGGAGTTTGAGGAGGCGGACGCGGCCAGGAA
GGCCATGCTCAGCCTGAGCACGCGCACGTTTGACAACAAGAAGCTCAGTT
CTGTGTACAACACCTTCGAGTGCTGCACGGGCGAGCGGCAGGAGGAGGCA
GCGAAGGAGGAGCCGCTGGCGGAGCGGCGGCGCGGAAGGCGAGGATGCAC
AGGGGACACTGAGGGCACAGCAGCACCGCACGCTCAACCTACGCCGCCAT
GGTGTTGGCCGTTGGGTACGCCTAGTGATACCGCCGCCGCCACCGATCCC
GGGCCCGCCGCCAATCCCGGGCCCGCCGCCGATCCCGGGCCCGCCGCCGA
TCCCGGGCCCGCCGCCGATACCGGGCCCCCCGCCGATACCGGGCCCGCCG
CCGATACCGGGCCCACCGCCGATACCGGGCCCGCCGCCGATACCGGACCC
GCCACCGATACCCGGCCCGCCACCACCTCAGCTGATGGCCCAGAGCTCTA
G
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