mRNA_3819 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160112
Unique NamemRNA_3819
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A835ZF70_9STRA (Adenylate cyclase associated C terminal-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF70_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 1.080e-149
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 
Query:    1 QQVTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            QQVTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH
Sbjct:    1 QQVTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 216
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A7S3XZ26_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ26_HETAK)

HSP 1 Score: 193 bits (490), Expect = 3.630e-59
Identity = 105/187 (56.15%), Postives = 131/187 (70.05%), Query Frame = 1 
Query:   85 APPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYT 645
            AP A A A P A  P     +E+  A +KW+VE+Q ++ GVV V V D   SVY+Y C DAT++I GKCK VC+DGC+K++V +D  +SS+E VNCQR++ QVR  VPSVAIDKTDG   YLSA +L  T TTSKSSEMN+S P PGG DD++ E+PIPEQFVH +      G  P VTS VSDLY+
Sbjct:    6 APAATAGAAPVARPPN----VEYQAAAHKWLVENQTREQGVVEVVVEDKNQSVYIYNCNDATINITGKCKGVCVDGCKKARVLLDTTVSSLEFVNCQRVQAQVRGTVPSVAIDKTDGLLLYLSAESLGATLTTSKSSEMNLSVPGPGGADDQV-EIPIPEQFVHRIVP----GPNPSVTSEVSDLYS 183
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: D7FIY2_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIY2_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 7.300e-59
Identity = 119/217 (54.84%), Postives = 138/217 (63.59%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANK---PQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            VTKDQQTWR E+K  +T      AP AP A AA KP A+    P+G PKLEF+Q G KW+VE+QG  +GVVTVEVTD KH VY+YGCVDAT+DIKGK                                 QVR +VPSVA+DKTDGF CYL    LETTF TSKSSEMNV+FP+P  D DE ME+PIPEQFVH++    P    P +TS VSDLY+H
Sbjct:  240 VTKDQQTWRKEFKADET------AP-APAAKAAPKPFASAKAGPKGPPKLEFIQQGMKWIVENQGSSSGVVTVEVTDKKHQVYIYGCVDATIDIKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSKSSEMNVAFPKP--DSDEQMEMPIPEQFVHTI-KFDP---KPRITSDVSDLYSH 443
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A7S2M9F9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M9F9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.620e-50
Identity = 112/218 (51.38%), Postives = 136/218 (62.39%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYK--GSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDA---GVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATAL-ETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLY 642
            V++DQQTWR E+K  G D P    +AP A P  A AK  A KP G PK E+   G KW VE+Q KD    GV  VEVTD K  VY+Y C + T+ I GKCKSV +D C K  V  D  IS+ E VNC+R++VQ   A PS +IDKTDG   +LS  A+ E++F TSKSSEMNVS+P   G   E+ E PIPEQF+H + N +       VTS VSDLY
Sbjct:  281 VSRDQQTWRKEFKNPGGDVPKP-TSAPVAAPKPAVAKFGAKKPLGPPKCEYQDRGCKWNVENQTKDTCEGGVCKVEVTDVKQQVYIYKCENVTIQIIGKCKSVILDSCTKCGVVFDNVISACEVVNCKRVQVQATGACPSFSIDKTDGIVVHLSNEAISESSFVTSKSSEMNVSWPDDAG---EIKEAPIPEQFMHKMVNGS-------VTSQVSDLY 487
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: K0TR62_THAOC (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TR62_THAOC)

HSP 1 Score: 179 bits (453), Expect = 4.130e-50
Identity = 110/216 (50.93%), Postives = 135/216 (62.50%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDA---GVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATAL-ETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLY 642
            VT+DQQTWR E+KG D  AA    PK P +   +K  A KP G PK E+   G KW VE+Q K++   GV +VEVTD K  VY+Y C + T+ IKGK KSV +D C K  V  D  IS+ E VNC+ ++VQ     PS +IDKTDG   YLS  A+ +++F TSKSSEMNVS+P   G   E+ E PIPEQFVH L N +       VTS VSDLY
Sbjct:  290 VTRDQQTWRKEFKGGD--AAPAPTPKVPASKPPSKFGAKKPLGPPKCEYQDRGCKWNVENQTKESCPNGVCSVEVTDPKQQVYIYKCQNITIQIKGKLKSVVLDSCTKCGVVFDTAISACEVVNCKSVQVQATNVCPSFSIDKTDGIVVYLSKDAISQSSFVTSKSSEMNVSWPDVSG---EIKESPIPEQFVHKLVNGS-------VTSEVSDLY 493
[Close]
BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A7S2JQX8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQX8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 7.660e-50
Identity = 108/223 (48.43%), Postives = 137/223 (61.43%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAP---KAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGV------VTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETT-FTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYT 645
            VTKD QTWR EYKG ++ +  +AA    KA P   AA  AA K    P  +FV  G KWVVE+Q K +        +T+E+ D KH  Y+Y C + T+D+KGKCK + IDGC++  V  D  IS VE VN + I VQ R  +PSV+IDKTDG   YLS  ++  T F TSKSSEMNVS+P  G D +E  E PIPEQF+H L + A       +TS VS+LY+
Sbjct:  277 VTKDMQTWRDEYKGDNSASTTVAAAPKAKAAPIPKAATTAAKKSY-PPVCKFVDVGAKWVVEYQTKTSNTFEGKSALTIEMADPKHQAYIYKCENITIDVKGKCKGLVIDGCKRVNVLFDNVISVVELVNNKNIAVQTRGVLPSVSIDKTDGCMVYLSKASVGVTNFVTSKSSEMNVSWPEEGADGEEYKEKPIPEQFLHKLVDGA-------ITSEVSELYS 491
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: F0Y8I9_AURAN (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I9_AURAN)

HSP 1 Score: 169 bits (429), Expect = 1.510e-47
Identity = 109/218 (50.00%), Postives = 133/218 (61.01%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDT---KHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALE-TTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            VT DQ+T++ EY G   PA     PKA P   A K    K  G PK   V  G KW+VE+Q KD GVVTV++      K ++YV  C +AT+ + GKC SV +D C K QV  D CISS E VN + +KVQVR   PSVAIDKTDG   YLS   L  T+F TSKSS+M VSFP    D+D+++E PIPEQF H    L  G   P +T+ VSDLY+H
Sbjct:  184 VTDDQKTYKKEYAGGAAPA-----PKAKPKVVARKQTVTK--GEPKKTLV--GKKWLVENQTKDCGVVTVDLDAAEGHKFTIYVVACYEATIVVNGKCNSVTVDACAKCQVVFDSCISSFEVVNSKSMKVQVRGTCPSVAIDKTDGILTYLSKDTLPITSFLTSKSSDMQVSFP---DDNDDMVEAPIPEQFQHKAC-LKDG--KPSLTTDVSDLYSH 386
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BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A485KAT0_9STRA (Aste57867_4002 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAT0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.530e-46
Identity = 109/214 (50.93%), Postives = 136/214 (63.55%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            VTKDQQTWRAEYK +D  A A  APK  P       AA +P G P  E  + GN W V HQ KD  V TV+  D K  VY++GCV+AT+ I+GK K++  D C KS++  D  +SSVE VNC+ ++VQ ++ VPSVAIDKTDG   YLS    +    TSKSSEMNV+FP   G + E +E PIPEQFVH +T+         V+S VSDLY+H
Sbjct:  275 VTKDQQTWRAEYK-ADGSAPAPPAPK--PVVPKVAAAAAQPTGEPVCEL-RNGN-WYVAHQ-KD--VFTVKDVDMKQQVYIFGCVNATILIEGKAKTIAFDKCVKSKLIFDAAVSSVEIVNCKNVQVQCKLKVPSVAIDKTDGCLVYLSYEGRDAQIVTSKSSEMNVAFPGTAGSE-EYIERPIPEQFVHRITDTNT------VSSDVSDLYSH 473
[Close]
BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A6G0W5Z7_9STRA (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5Z7_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.550e-45
Identity = 105/214 (49.07%), Postives = 131/214 (61.21%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            VTKDQQTWRAEYK       A   PKA PA         +P G P  E  + GN W V HQ KD  V TV+  + K  VY++GCV+AT+ I+GK K++  D C KS++  D  +SSVE VNC+ ++VQ +  VPSVAIDKTDG   YLS    +    TSKSSEMNV+FP      +E +E PIPEQFVH +T+      A  V+S VSDLY+H
Sbjct:  268 VTKDQQTWRAEYKADG----AAPQPKAAPAXXXXAAKVQEPTGEPVCEL-RNGN-WYVAHQ-KD--VFTVKDVNLKQQVYIFGCVNATILIEGKAKTIAFDKCIKSKLIFDAAVSSVEIVNCKNVQVQCKQKVPSVAIDKTDGCLVYLSYEGRDAQLVTSKSSEMNVAFPE-SATSEEYIERPIPEQFVHRITD------ANTVSSDVSDLYSH 465
[Close]
BLAST of jgi.p|Trimin1|160112 vs. uniprot
Match: A0A8J2SYG5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYG5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.510e-44
Identity = 103/219 (47.03%), Postives = 131/219 (59.82%), Query Frame = 1 
Query:    7 VTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQ----GTPKLEFVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSVCIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALE-TTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPGGAAPMVTSSVSDLYTH 648
            VTKDQQTWR E+ G              PA  A K A  K Q    G P  + +  G KW+VE+  K  GVVT+EV + K +VY+  C +ATL I GKC  V +D  +K QV  D CI+S E VNC+ +KVQ +   PS+AIDKTDG   YLS   L  T+F TSKSS+M VSFP    + DE++E PIPEQF H+   +   G  P++++ VSDLYTH
Sbjct:  260 VTKDQQTWRKEFSGDK------------PAVVAKKAAPVKKQTVTRGPPSKKLL--GKKWMVENYSKADGVVTIEV-EPKFTVYIACCYEATLVINGKCNGVVLDASQKCQVVFDTCIASFEVVNCKSVKVQCKGTCPSIAIDKTDGILTYLSKETLPVTSFLTSKSSDMQVSFPN---EKDEMVEAPIPEQFRHTAALV---GGKPVLSTDVSDLYTH 457
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160112 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF70_9STRA1.080e-149100.00Adenylate cyclase associated C terminal-domain-con... [more]
A0A7S3XZ26_HETAK3.630e-5956.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FIY2_ECTSI7.300e-5954.84C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S2M9F9_9STRA2.620e-5051.38Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0TR62_THAOC4.130e-5050.93C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S2JQX8_9STRA7.660e-5048.43Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0Y8I9_AURAN1.510e-4750.00C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A485KAT0_9STRA2.530e-4650.93Aste57867_4002 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0W5Z7_9STRA4.550e-4549.07C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A8J2SYG5_9STRA1.510e-4447.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1305650..1307013 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160112|e_gw1.12.64.1
BRITEko00000,ko03036,ko04131,ko04147
KEGG koko:K11547,ko:K17261
GOsGO:0000003,GO:0000226,GO:0000278,GO:0000281,GO:0000323,GO:0000902,GO:0000904,GO:0000910,GO:0000935,GO:0001654,GO:0001667,GO:0001745,GO:0001751,GO:0001754,GO:0001775,GO:0001891,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003002,GO:0003006,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005768,GO:0005773,GO:0005774,GO:0005775,GO:0005829,GO:0005856,GO:0005886,GO:0005937,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006898,GO:0006907,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007190,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0008064,GO:0008092,GO:0008103,GO:0008150,GO:0008154,GO:0008179,GO:0008360,GO:0008407,GO:0009267,GO:0009605,GO:0009628,GO:0009653,GO:0009798,GO:0009826,GO:0009887,GO:0009888,GO:0009953,GO:0009987,GO:0009991,GO:0009994,GO:0010468,GO:0010638,GO:0012505,GO:0012506,GO:0014069,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016050,GO:0016192,GO:0016325,GO:0016477,GO:0019222,GO:0019725,GO:0019899,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022416,GO:0022603,GO:0022604,GO:0022610,GO:0023052,GO:0030029,GO:0030030,GO:0030036,GO:0030042,GO:0030139,GO:0030141,GO:0030154,GO:0030182,GO:0030427,GO:0030428,GO:0030479,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030834,GO:0030836,GO:0030863,GO:0030864,GO:0030951,GO:0030952,GO:0031090,GO:0031135,GO:0031137,GO:0031138,GO:0031143,GO:0031152,GO:0031175,GO:0031279,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032153,GO:0032155,GO:0032279,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0032990,GO:0033043,GO:0033298,GO:0033554,GO:0034774,GO:0035220,GO:0035222,GO:0035295,GO:0035556,GO:0035578,GO:0035838,GO:0036230,GO:0040007,GO:0040011,GO:0042051,GO:0042052,GO:0042119,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042582,GO:0042592,GO:0042594,GO:0042802,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043243,GO:0043244,GO:0043299,GO:0043312,GO:0043332,GO:0043624,GO:0043900,GO:0043901,GO:0043933,GO:0044352,GO:0044354,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044764,GO:0045055,GO:0045202,GO:0045321,GO:0045335,GO:0045761,GO:0046530,GO:0046716,GO:0046903,GO:0046999,GO:0048190,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048592,GO:0048599,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051014,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051261,GO:0051286,GO:0051301,GO:0051339,GO:0051493,GO:0051495,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0060205,GO:0060249,GO:0060255,GO:0060429,GO:0060560,GO:0061564,GO:0061640,GO:0061645,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071496,GO:0071840,GO:0071944,GO:0072499,GO:0090066,GO:0090596,GO:0090702,GO:0097435,GO:0097458,GO:0097485,GO:0097708,GO:0098588,GO:0098609,GO:0098630,GO:0098657,GO:0098743,GO:0098794,GO:0098805,GO:0098984,GO:0099120,GO:0099503,GO:0099568,GO:0099572,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901879,GO:1901881,GO:1902903,GO:1902905,GO:1903047,GO:2000241,GO:2000242
Preferred nameCAP1
Descriptionadenylate cyclase binding
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2675@1|root,KOG2675@2759|Eukaryota
Evalue1.2e-59
Seed ortholog2880.D7FIY2
Hectar predicted targeting categoryother localisation
TranscriptId160434
TrackFilteredModels1
ProteinId160112
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160112gene_3819Tribonema minus UTEX_B_3156 geneContig_12 1305650..1307013 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160112Trimin1|160112|e_gw1.12.64.1Tribonema minus UTEX_B_3156 polypeptideContig_12 1305650..1307013 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3819_3exon_3819_3Tribonema minus UTEX_B_3156 exonContig_12 1305650..1305916 -
exon_3819_2exon_3819_2Tribonema minus UTEX_B_3156 exonContig_12 1306221..1306409 -
exon_3819_1exon_3819_1Tribonema minus UTEX_B_3156 exonContig_12 1306819..1307013 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3819CDS_3819Tribonema minus UTEX_B_3156 CDSContig_12 1306819..1307013 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3819 ID=mRNA_3819|Name=jgi.p|Trimin1|160112|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_12:1305650..1307013- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAACAGGTGACCAAGGACCAGCAGACGTGGCGCGCAGAGTACAAGGGCAG
CGACACTCCCGCCGCGGCGCTTGCCGCTCCCAAGGCACCGCCCGCCGCCG
CCGCTGCCAAGCCCGCTGCCAATAAGCCCCAGGGGACCCCCAAGCTGGAG
TTCGTGCAGGCGGGCAACAAGTGGGTGGTGGAGCACCAGGGCAAGGACGC
GGGCGTCGTGACGGTGGAGGTGACCGACACCAAGCACAGCGTGTACGTGT
ACGGGTGCGTGGACGCGACGCTGGACATCAAGGGAAAGTGCAAGAGCGTC
TGCATCGACGGCTGCCGCAAGTCCCAGGTCTTTGTGGACGAGTGCATCAG
CAGCGTGGAGGCCGTCAACTGCCAGCGCATCAAGGTGCAAGTGCGCGTCG
CCGTGCCGAGCGTTGCCATCGACAAGACGGACGGCTTCCAGTGCTACCTG
AGCGCGACGGCGCTCGAGACGACCTTCACCACGTCCAAGTCGAGCGAGAT
GAACGTCTCCTTCCCGCGCCCTGGCGGCGACGACGACGAGCTCATGGAGC
TGCCCATCCCGGAGCAGTTCGTGCACAGCCTCACGAACCTCGCGCCGGGC
GGCGCCGCGCCCATGGTCACCAGCAGCGTCAGCGACCTCTACACGCACTG
A
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protein sequence of jgi.p|Trimin1|160112

>Trimin1|160112|e_gw1.12.64.1 ID=Trimin1|160112|e_gw1.12.64.1|Name=jgi.p|Trimin1|160112|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
QQVTKDQQTWRAEYKGSDTPAAALAAPKAPPAAAAAKPAANKPQGTPKLE
FVQAGNKWVVEHQGKDAGVVTVEVTDTKHSVYVYGCVDATLDIKGKCKSV
CIDGCRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYL
SATALETTFTTSKSSEMNVSFPRPGGDDDELMELPIPEQFVHSLTNLAPG
GAAPMVTSSVSDLYTH*
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mRNA from alignment at Contig_12:1305650..1307013-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3819 ID=mRNA_3819|Name=jgi.p|Trimin1|160112|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1364bp|location=Sequence derived from alignment at Contig_12:1305650..1307013- (Tribonema minus UTEX_B_3156 )
CAACAGGTGACCAAGGACCAGCAGACGTGGCGCGCAGAGTACAAGGGCAG
CGACACTCCCGCCGCGGCGCTTGCCGCTCCCAAGGCACCGCCCGCCGCCG
CCGCTGCCAAGCCCGCTGCCAATAAGCCCCAGGGGACCCCCAAGCTGGAG
TTCGTGCAGGCGGGCAACAAGTGGGTGGTGGAGCACCAGGGCAAGGTGTG
TATGTAGTTCAACATCGTACTTCAAAGGTGAAGGAGAGCAAACAGTTGAC
GCCCAAGGGTCGCGTTCGTGCAGGCGCGGGTTGTGGAGACCCACGGCAGG
GTGTGCATGTCCTGTTGAATGTGCGTGAGGATGCCATAGAGCACGCAGTG
GCGACTCTCCGATAATTGTTATGAGAAGCATGCAAGCGTGCTTGGGTGTG
CCGGCAGTTTTTGCGGGCAGAAATGTACGCCTCGAAGTCGCGTGGCAGCG
GGCCTCGCTGGCCAGGTGCGCAGCCAGCATACCTGCCTGAACCCCCCCCC
CCGTACACCTGTGCATCTCCTGTACGCCCCCCTGTACGCCCCCCCGTACT
CTGCAACCAGTACACCTCATATACCCCCCCCTGTACGCCCCCCTGTACTC
GCAGGACGCGGGCGTCGTGACGGTGGAGGTGACCGACACCAAGCACAGCG
TGTACGTGTACGGGTGCGTGGACGCGACGCTGGACATCAAGGGAAAGTGC
AAGAGCGTCTGCATCGACGGCTGCCGCAAGTCCCAGGTCTTTGTGGACGA
GTGCATCAGCAGCGTGGAGGCCGTCAACTGCCAGCGCATCAAGGTACGCC
GGGCCGCCAGAACTTCAAGTGCCTTTCCTTTGACTATTTCGTGCGAGCAA
GGGGGGAACATCGATGTAACGTTTGCTACGCACCCTACATCATACCTTGT
GCCGAAGTGTCTCAACGCGCATGGATGATCGCACCGAAGCGCTCACATGG
CATCTGCCCCCATCAAGCACTTCACTTCACGCATGTCTACTGGTCTTTTT
TCTTTCAGTTTGTCAATTGTAAGTCCCCCCTGGCAGTTGCCCCTCCAAGC
CCTCCCCCCCCCCCTTCCCCTAACCCTGACCCTAACCCCGCCCGCAGGTG
CAAGTGCGCGTCGCCGTGCCGAGCGTTGCCATCGACAAGACGGACGGCTT
CCAGTGCTACCTGAGCGCGACGGCGCTCGAGACGACCTTCACCACGTCCA
AGTCGAGCGAGATGAACGTCTCCTTCCCGCGCCCTGGCGGCGACGACGAC
GAGCTCATGGAGCTGCCCATCCCGGAGCAGTTCGTGCACAGCCTCACGAA
CCTCGCGCCGGGCGGCGCCGCGCCCATGGTCACCAGCAGCGTCAGCGACC
TCTACACGCACTGA
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Coding sequence (CDS) from alignment at Contig_12:1305650..1307013-

>mRNA_3819 ID=mRNA_3819|Name=jgi.p|Trimin1|160112|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_12:1305650..1307013- (Tribonema minus UTEX_B_3156 )
CAACAGGTGACCAAGGACCAGCAGACGTGGCGCGCAGAGTACAAGGGCAG
CGACACTCCCGCCGCGGCGCTTGCCGCTCCCAAGGCACCGCCCGCCGCCG
CCGCTGCCAAGCCCGCTGCCAATAAGCCCCAGGGGACCCCCAAGCTGGAG
TTCGTGCAGGCGGGCAACAAGTGGGTGGTGGAGCACCAGGGCAAGGACGC
GGGCGTCGTGACGGTGGAGGTGACCGACACCAAGCACAGCGTGTACGTGT
ACGGGTGCGTGGACGCGACGCTGGACATCAAGGGAAAGTGCAAGAGCGTC
TGCATCGACGGCTGCCGCAAGTCCCAGGTCTTTGTGGACGAGTGCATCAG
CAGCGTGGAGGCCGTCAACTGCCAGCGCATCAAGGTGCAAGTGCGCGTCG
CCGTGCCGAGCGTTGCCATCGACAAGACGGACGGCTTCCAGTGCTACCTG
AGCGCGACGGCGCTCGAGACGACCTTCACCACGTCCAAGTCGAGCGAGAT
GAACGTCTCCTTCCCGCGCCCTGGCGGCGACGACGACGAGCTCATGGAGC
TGCCCATCCCGGAGCAGTTCGTGCACAGCCTCACGAACCTCGCGCCGGGC
GGCGCCGCGCCCATGGTCACCAGCAGCGTCAGCGACCTCTACACGCACTG
A
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