mRNA_3717 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A835ZC50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC50_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.190e-15
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3

Query:   33 MINPAEGAALNGHVSVLKWLKARGLFRNELVLESAA 140
            MINPAEGAALNGHVSVLKWLKARGLFRNELVLESAA
Sbjct:    1 MINPAEGAALNGHVSVLKWLKARGLFRNELVLESAA 36

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A835ZLA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLA1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.460e-7
Identity = 30/45 (66.67%), Postives = 33/45 (73.33%), Query Frame = 3

Query:   15 ASPF---GSMINPAEGAALNGHVSVLKWLKARGLFRNELVLESAA 140
            ASP+   G   NPA GAA  GH+SVLKWLKA GLFR + VLESAA
Sbjct:  619 ASPYNYVGMYDNPAAGAARRGHMSVLKWLKAHGLFRKKQVLESAA 663

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A836CLV1_9STRA (NADH(P)-binding-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV1_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 3.330e-200
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1

Query:   58 MTASSGSASRREALDSTAAAACAAVLSFLSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPDHAL 960
            MTASSGSASRREALDSTAAAACAAVLSFLSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPDHAL
Sbjct:    1 MTASSGSASRREALDSTAAAACAAVLSFLSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPDHAL 301

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: D8LDG8_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG8_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 1.250e-82
Identity = 151/262 (57.63%), Postives = 182/262 (69.47%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAV-----DVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 951
            VTVLGA GKTG ECV+ L +KG    A +RS  L ++  +P A  T   +     DVT  SS+   +KGA  VIFA+SASK GG+A+AVDY+GVVN AKACLE  VPRLV+VSSGGV+ P S +YKFLNLFGEIM +K  GE+++R++YA  D  C+YTIVRPGGLTL PP GV  +E+NQGD  SGRIARADVA +CVE+IYS    D T ECY  DT KPL +VGVSNILKQ       +  +   G TW  LF GL+ D
Sbjct:  112 VTVLGAGGKTGRECVEYLASKGTGVRAVARS--LTNKEGEPLAFTTTKGITMETADVTVPSSLPGVIKGASAVIFASSASKQGGSAKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLNLFGEIMSWKIQGEDQLRSMYAAQDV-CHYTIVRPGGLTLDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAKPLAAVGVSNILKQKTDDTAKSFGTESTGDTWDALFSGLKHD 370

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S3UTL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL3_HETAK)

HSP 1 Score: 262 bits (669), Expect = 6.390e-81
Identity = 163/315 (51.75%), Postives = 203/315 (64.44%), Query Frame = 1

Query:   55 YMTASSGSASRREALDSTAAA-ACAAVLSFLSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSE----------FEDPSALLTAAAVDVTNLSSVSAAVK-GAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCY-YTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSA---HRGSTWAQLFQGLEPD 951
            Y  A+ G   RREAL    +  A   +LS LSP + FA+ G  V VLGA GKTG ECV  LL  G+ C ATSRSG+ + +                 L+ AA +V   ++++  +  G  GVIFAASASK GG A+ VDY+G+V  AKAC+   VPRLV+VSSGGVSKP+S VYKFLNLFGEIMK+K +GE+EV+ALYA +  P   YT+VRPGGLT  P  GV  LE+NQGD  SGRIARADVA I V A+   A ++T FECY ADT KPL++VG SNI+K+       A +S     R  +W  LF+GL+PD
Sbjct:   49 YQMAADGPMDRREALRRVGSTGASLGLLSILSPQSAFASPG-PVVVLGAGGKTGKECVYSLLRNGVPCIATSRSGAPQLDAAAXXXXXXXXXXXXXXLSFAAANVVQETTLTEVITPGIAGVIFAASASKKGGTAKEVDYEGLVKVAKACIAAEVPRLVVVSSGGVSKPDSAVYKFLNLFGEIMKYKVMGEDEVKALYAAAGNPALGYTVVRPGGLTEEPAKGVAALELNQGDTKSGRIARADVAEIAVRALLDPAAKNTVFECYDADTSKPLNAVGASNIMKKKTSTEEAAATSTGLERRADSWGGLFKGLKPD 362

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S2HEC2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HEC2_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.080e-80
Identity = 150/266 (56.39%), Postives = 180/266 (67.67%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGS------LKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAP---CYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 951
            V ++GANG+TGTECVK L + G+   ATSRSG+      + S     S LL  AA DVT   ++++ ++G+K VIFAASASK GG A AVD  G+VN AKAC+E NVPRLVIVSSGGVSKP+SPVY FLN+FG IM+ K  GE+ VR +Y    +      YT+VRPGGLT  PP GV  +E+NQGD  SGRI+RADVAAICVE + SDA   TTFECY ADT  PL SVG+SNI+K        +     RG TW  LF GLE D
Sbjct:  127 VIIIGANGRTGTECVKYLASSGMPVVATSRSGTYNALEEVSSTLPPSSTLLREAACDVTKPETLTSTIQGSKAVIFAASASKAGGTAAAVDNTGLVNVAKACIECNVPRLVIVSSGGVSKPDSPVYLFLNIFGNIMEEKIRGEDAVREMYKSLPSGKNGLSYTVVRPGGLTTDPPRGVAAVELNQGDTKSGRISRADVAAICVECLSSDAAAGTTFECYDADTAAPLASVGMSNIMKAKTREAFVS-GKERRGETWGALFSGLEKD 391

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S3Q5A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5A4_9STRA)

HSP 1 Score: 251 bits (641), Expect = 5.640e-77
Identity = 142/260 (54.62%), Postives = 175/260 (67.31%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEA-IYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSA--HRGSTWAQLFQGLEPD 951
            + V+GANGKTG+ECV   +++GI   ATSR G    E+     L TA   DVT  S+V AA+KG++ VIFAASASK GG A AVD  G+ N A +C+   +P LVIVSSG V+KP+SPVYKFLNLFG IM  K  GE+ VR LY  + +PC YT++RPGGLT     GV  LE+NQGD  SGRI+RADVAA+C+EA ++S  +  TTFECY ADT KPL +VGVSNI+K      +    S    RG TW  +F GLE D
Sbjct:   86 ICVIGANGKTGSECVDACISRGINVRATSRGGVYTGEYSSEQFLSTAPC-DVTISSTVDAAIKGSQAVIFAASASKAGGTAAAVDNIGLTNVASSCIRQGIPHLVIVSSGAVTKPSSPVYKFLNLFGNIMAEKIKGEDTVRELYKDASSPCTYTVIRPGGLTQELARGVSALELNQGDTKSGRISRADVAALCIEATLHSKDSGSTTFECYDADTSKPLGTVGVSNIVKAKNKSDSEVFMSGKERRGETWGDIFVGLEND 344

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S1CTA4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTA4_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.600e-74
Identity = 141/266 (53.01%), Postives = 176/266 (66.17%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPS-ALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQSDA-------PCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAI-YSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 951
            + V+G NG+TGTE VK L++K     ATSR+G        P+ A+L     DVTN  SV  A  G   VIFAASASK GG   AVD  G+VN AKAC++ NVP LV+VSSG V+KP+SPVY+FLNLFG+IM+ K  GE+ VR LYA+ +A          YTI+RPGGLTL PP GV  +E+NQGD  SGR+ARADVA +CVE++ Y   T +TTFECY ADTG PL +VG+SNI K+             RG+T+ +LF GL+ D
Sbjct:   95 ICVIGCNGRTGTEVVKYLISKNEPIKATSRTGEYNDAASVPAGAMLEQLVCDVTNPKSVQLACAGTSAVIFAASASKSGGTPSAVDNAGLVNVAKACMDANVPHLVVVSSGAVTKPSSPVYQFLNLFGKIMEEKVKGEDAVRKLYAEHNANLREGGQKLTYTIIRPGGLTLDPPRGVAAIELNQGDTKSGRLARADVAQLCVESLNYPQLTGETTFECYDADTGAPLATVGLSNIAKKKTDGEVFVSGFERRGNTYEELFTGLQKD 360

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: B7G342_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G342_PHATC)

HSP 1 Score: 244 bits (624), Expect = 3.690e-74
Identity = 136/260 (52.31%), Postives = 176/260 (67.69%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQS--DAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAI-YSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 951
            + V+GANG+TG++CV+  + +GI   ATSRSG+   +    S L+     DVT  +++S A++  + VIF ASASK GG    VD  G+VN A+ACL   +P LV+VSSG V+KPNSPV++FLNLFG+IM+ K  GE+EVR LY+ S       YT++RPGGLT   P GV  LE+NQGD  SGRIARADVAA+C+EA  Y   T   TFECY +DTGKPL +VG+SNILKQ A P      + H G T+ +LF GL+ D
Sbjct:  109 ICVIGANGRTGSQCVQACVERGIPVRATSRSGTYNGD--SSSKLVALLPCDVTKPATISRAIERCQAVIFCASASKNGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLNLFGKIMEEKIKGEDEVRRLYSMSGNQPSLVYTVIRPGGLTEDAPRGVTALELNQGDTKSGRIARADVAALCIEATRYPGLTGFATFECYDSDTGKPLSTVGISNILKQKAAPADFTSGTEHVGETFEKLFTGLQRD 366

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S0HMC0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HMC0_9CRYP)

HSP 1 Score: 233 bits (594), Expect = 1.360e-69
Identity = 137/273 (50.18%), Postives = 183/273 (67.03%), Query Frame = 1

Query:  172 GGAVTVLGANGKTGTECVKQLLAKGIACTATSRS--GSLKSEF--EDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALY--AQSDAPCY---YTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSA----HRGSTWAQLFQGLEPD 951
            GG+V V+GA G TG ECV  L+ +GI   A  R+   S   +F  E  S+L++    D+T   ++   +KG K +IFAASASK GG+ + VDY+G++N A+ C++ N+ RLV+VSSG VS+P+S VYKFLNLFG IM +K  GE E++++Y  A++  P +   YTIVRPGGLT  P LGV  +E+NQGD  SGRIARADVA ICVE+I+S    DTTFECY  DT KPL+ VG+SN+ K+     T A S+      +G +W +LF GLE D
Sbjct:  101 GGSVAVVGAGGGTGKECVDALIRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEIVGDITAPDTLRDPLKGCKALIFAASASKKGGDPQKVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKSMYKAAKAKNPSFSGSYTIVRPGGLTEGPSLGVSSIELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSD-TEAQSNLTGKERQGDSWPKLFSGLEKD 372

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BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: L1IPP0_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPP0_GUITC)

HSP 1 Score: 228 bits (581), Expect = 1.460e-68
Identity = 134/273 (49.08%), Postives = 181/273 (66.30%), Query Frame = 1

Query:  172 GGAVTVLGANGKTGTECVKQLLAKGIACTATSRS--GSLKSEF--EDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALY--AQSDAP---CYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPS----SAHRGSTWAQLFQGLEPD 951
            GG++ V+GA+G TG ECV  L+ +GI   A  R+   S   +F  E  S+L++    D+T+  ++  ++KG K +IFAASASK GG+ + VDY+G++N A+ C++ N+ RLV+VSSG VS+P+S VYKFLNLFG IM +K  GE E++ +Y  A+   P   C YTIVRPGGLT    LGV  +E+NQGD  SGRIARADVA ICVE+I+S    DTTFECY  DT KPL+ VG+SN+ K+     T A S       +  +W +LF GL+ D
Sbjct:   30 GGSIAVVGASGGTGKECVNALVRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEVIGDITSPDTLRDSLKGCKALIFAASASKKGGDPKQVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKGMYKSAREKNPSFACSYTIVRPGGLTEGAALGVSSVELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSD-TEAQSIMTGKERQADSWPKLFAGLDKD 301

[Close]

BLAST of jgi.p|Trimin1|11657 vs. uniprot
Match: A0A7S2PD41_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PD41_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.090e-67
Identity = 140/271 (51.66%), Postives = 173/271 (63.84%), Query Frame = 1

Query:  181 VTVLGANGKTGTECVKQLLAKGIACTATSRSGSLKSEF---EDPSALLTAAAVDVTNLSSV-------SAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGE-IMKFKALGEEEVRALYAQSDAPCY---YTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 951
            V VLGANG TG ECV  LL KG +C ATSRSG LK +    E+     +A AVDVT++ S+       +        VIFAASAS  GG+A+AVD +GV+NAA+ C+ NN+PRLVIVSSG V++P+S VYK LN  G+ IM+ K  GE+ VR +YA  +       YTIVRPGGLT    LG   LE+NQGD  SGR++RADVA ICV  + S  T D TFECY A+T KP++SVG+SNI+K T    T        G TW +LF GL  D
Sbjct:   31 VLVLGANGGTGNECVAALLKKGRSCIATSRSGELKYQDMYRENELFSSSANAVDVTSIESLEDVLLEKATPTNNIGAVIFAASASTKGGDADAVDRQGVINAAQCCIANNIPRLVIVSSGTVTRPDSAVYKLLNFVGKGIMEAKISGEDAVRDMYANPEIKAKGLGYTIVRPGGLTTGTSLGASALELNQGDNKSGRLSRADVAEICVNCLDSPYTFDVTFECYEANTAKPVESVGISNIMKSTDAT-TFVSGREQLGETWEELFNGLSCD 300

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|11657 vs. uniprot
BLAST of jgi.p|Trimin1|11657 vs. uniprot

BLAST of jgi.p|Trimin1|11657 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

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POSITION

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Match Name	E-value	Identity	Description
A0A835ZC50_9STRA	4.190e-15	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZLA1_9STRA	7.460e-7	66.67	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

BLAST of jgi.p|Trimin1|11657 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CLV1_9STRA	3.330e-200	100.00	NADH(P)-binding-domain-containing protein n=2 Tax=...	[more]
D8LDG8_ECTSI	1.250e-82	57.63	NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec...	[more]
A0A7S3UTL3_HETAK	6.390e-81	51.75	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2HEC2_9STRA	2.080e-80	56.39	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S3Q5A4_9STRA	5.640e-77	54.62	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S1CTA4_9STRA	1.600e-74	53.01	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
B7G342_PHATC	3.690e-74	52.31	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A7S0HMC0_9CRYP	1.360e-69	50.18	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]
L1IPP0_GUITC	1.460e-68	49.08	NAD(P)-bd_dom domain-containing protein n=2 Tax=Gu...	[more]
A0A7S2PD41_9STRA	1.090e-67	51.66	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]

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Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_12:318496..318857+
coding sequence from alignment at Contig_12:318496..318857+

spliced messenger RNA

>mRNA_3717 ID=mRNA_3717|Name=jgi.p|Trimin1|11657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=362bp|location=Sequence derived from alignment at Contig_12:318496..318857+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GATTTTCGCCCTTTGCGTCACCCTTTGGGTCCATGATCAACCCTGCTGAA
GGCGCAGCGTTAAACGGTCATGTTAGCGTATTGAAGTGGCTCAAGGCCCG
TGGCCTCTTCAGGAACGAGCTTGTACTTGAGAGTGCAGCCAGCGAGAGTC
GTTTTAAGGTGCTCAAGTGGGCACTCTCAATCGGGTGTGTGTGGAACGAG
TCCATATGCCAAACAGCGGCAGAGGGGGGGGACAAAGCCGTTGTAGACTG
GGCGGCAGCACGGGGGTGCACGTGCGCCGCTCACAGCAGCGCTTGATGCA
TGATGCATGGCCTGCCACGATTATCTTTCAGTTGCTTCTTCAAATACACA
CAGAGTATCAAG

protein sequence of jgi.p|Trimin1|11657

>Trimin1|11657|CE11656_12 ID=Trimin1|11657|CE11656_12|Name=jgi.p|Trimin1|11657|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=88bp
MINPAEGAALNGHVSVLKWLKARGLFRNELVLESAASESRFKVLKWALSI
GCVWNESICQTAAEGGDKAVVDWAAARGCTCAAHSSA*

mRNA from alignment at Contig_12:318496..318857+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3717 ID=mRNA_3717|Name=jgi.p|Trimin1|11657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=362bp|location=Sequence derived from alignment at Contig_12:318496..318857+ (Tribonema minus UTEX_B_3156 )
GATTTTCGCCCTTTGCGTCACCCTTTGGGTCCATGATCAACCCTGCTGAA
GGCGCAGCGTTAAACGGTCATGTTAGCGTATTGAAGTGGCTCAAGGCCCG
TGGCCTCTTCAGGAACGAGCTTGTACTTGAGAGTGCAGCCAGCGAGAGTC
GTTTTAAGGTGCTCAAGTGGGCACTCTCAATCGGGTGTGTGTGGAACGAG
TCCATATGCCAAACAGCGGCAGAGGGGGGGGACAAAGCCGTTGTAGACTG
GGCGGCAGCACGGGGGTGCACGTGCGCCGCTCACAGCAGCGCTTGATGCA
TGATGCATGGCCTGCCACGATTATCTTTCAGTTGCTTCTTCAAATACACA
CAGAGTATCAAG

Coding sequence (CDS) from alignment at Contig_12:318496..318857+

>mRNA_3717 ID=mRNA_3717|Name=jgi.p|Trimin1|11657|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=264bp|location=Sequence derived from alignment at Contig_12:318496..318857+ (Tribonema minus UTEX_B_3156 )
ATGATCAACCCTGCTGAAGGCGCAGCGTTAAACGGTCATGTTAGCGTATT
GAAGTGGCTCAAGGCCCGTGGCCTCTTCAGGAACGAGCTTGTACTTGAGA
GTGCAGCCAGCGAGAGTCGTTTTAAGGTGCTCAAGTGGGCACTCTCAATC
GGGTGTGTGTGGAACGAGTCCATATGCCAAACAGCGGCAGAGGGGGGGGA
CAAAGCCGTTGTAGACTGGGCGGCAGCACGGGGGTGCACGTGCGCCGCTC
ACAGCAGCGCTTGA