mRNA_3675 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YHZ7_9STRA (Kinase-like domain-containing protein (Fragment) n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHZ7_9STRA) HSP 1 Score: 482 bits (1240), Expect = 4.040e-172 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
Query: 1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL
Sbjct: 1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 239
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YJH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH2_9STRA) HSP 1 Score: 396 bits (1018), Expect = 4.540e-137 Identity = 203/239 (84.94%), Postives = 210/239 (87.87%), Query Frame = 1
Query: 1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
MHHH+ SGA GSE A XXXREVQMMR LRHPNLVAFLGS SRGNELFILQEWVPGGS+ ALLSSFG LNTKVVR YARQ LHGLAYLHAN I HRDLKCANLLVDAGGNVKIADFGTSAVVSQCRG+HGQ GTPIYMAPEL+FQ G GLPVDIWAFGAAVLEMATA PWRI GPEGMPSIDYLRCLVA++ APALPLDLDA LRS+L QCFCWRSGDRPTCSALLAHDFL
Sbjct: 87 MHHHARSGASGSEHAXXXXREVQMMRLLRHPNLVAFLGSTSRGNELFILQEWVPGGSLLALLSSFGRLNTKVVRHYARQVLHGLAYLHANTIAHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGNHGQ-----LIGTPIYMAPELLFQ--GKHGLPVDIWAFGAAVLEMATALAPWRIQGPEGMPSIDYLRCLVAKEHAPALPLDLDAALRSMLMQCFCWRSGDRPTCSALLAHDFL 318
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.800e-56 Identity = 105/233 (45.06%), Postives = 142/233 (60.94%), Query Frame = 1
Query: 28 RGSEQ-AHXXXREVQMMRSLRHPNLVAFLGSASRG--NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
RGS++ H RE+ +MR+ HPN+V++LG+ R ++L I QEWVPGGSVS+LL FG + + R Y RQAL GLAYLH++ +VHRD+ +N+LVD G VK+ADFG S +S G L GTP +MAPE++ + G+PVD+W+FG AVL+M + +PPW G P L R + P LP DL A LR+ L +CF W +RPT + L FL
Sbjct: 41 RGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTP---YFMAPEVLQR--SAHGMPVDVWSFGGAVLQMVSGEPPWFSYG-VSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFL 267
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA) HSP 1 Score: 192 bits (488), Expect = 5.240e-56 Identity = 107/227 (47.14%), Postives = 139/227 (61.23%), Query Frame = 1
Query: 22 GARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALL 702
GA + H REV +M L+H N V +LG+ S ++++I Q+W+PGGS+SALL+ FG L+ V R YARQAL GLAYLHAN IVHRDLK NLL+D G +KIADFGTSA V G L GTP +MAPE++ L + GLPVDIW F VL+M T + PW +P++ + A +R P LP D+ +R++L CF W +RPT LL
Sbjct: 47 GAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPD--GAAAAEML----GTPYFMAPEML--LRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTSLPALLSVM-QAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLL 264
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA) HSP 1 Score: 178 bits (451), Expect = 6.050e-52 Identity = 102/234 (43.59%), Postives = 141/234 (60.26%), Query Frame = 1
Query: 19 SGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPW--RITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDF 714
SG R S A E+++M+ RH N+V +LG+ ++I+QEWVPGGS++++LS+FG V + YARQ LHGL YLH+ VHRDLK N+LV AGG VKIADFGTS + + D G + GT +MAPE++ + QG+ VD+WAF VL+M T PW + + +P + LR + A R P LP DL+ T+R+ LT CF W +RPT L+ H +
Sbjct: 37 SGGRSST-ASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQ-----GTLHFMAPEVLQRQP--QGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRL--LRLMQAH-RMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.210e-51 Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 1
Query: 61 EVQMMRSLRHPNLVAFLGSASRGNE--LFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
E+Q+M L HP++V +LG+ + ++ L I QEWVP GS+ +LL FG L+ + R+Y RQ L GL YLHAN ++HRD+K N+LVD GNVK+ADFG + V+ D+G M GTP++MAPE++ L+ G VD+W+ G AVLEM T +PPW T + I++ P LP DL LR L CF W +G RPT L+AH++L
Sbjct: 350 EIQVMHKLVHPHIVGYLGAELQDSKRKLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILVDDRGNVKLADFGCALVLKD---DNGDGVEMSMKGTPLFMAPEML--LKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFS---ENPGPPPLPEDLSPALREFLLSCFTWEAGRRPTSHQLVAHEYL 562
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YMG7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG7_9STRA) HSP 1 Score: 173 bits (439), Expect = 9.340e-51 Identity = 88/162 (54.32%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 61 EVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITG 546
E +MR L+HPN+V FLG+ + G EL I QEWVPGGSV+ALLS FG + + R YARQAL G+AYLH I HRD+K +N+LV A G +K+ADFGTS VV G S GTP +MAPE++ + GLPVDIW FG A+L+MAT PPW G
Sbjct: 31 EAALMRDLQHPNIVHFLGTETHGTELRIFQEWVPGGSVAALLSRFGPFSEPMTRSYARQALAGIAYLHGRHIAHRDIKGSNMLVGANGVLKLADFGTSVVVPADNTARGISASGSVQGTPYFMAPEVLQR--SAHGLPVDIWGFGGALLQMATGAPPWSAAG 190
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.660e-49 Identity = 100/223 (44.84%), Postives = 137/223 (61.43%), Query Frame = 1
Query: 58 REVQMMRSLRHPNLVAFLGSASR--GNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARK-RAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
RE+ +MR HPN+V++LG+ R +L I QEWVPGGSVS+LL FG + + RRY RQAL GL YLH + +VHRD+K +N+LVD G VK+ADFG S VS D G L GTP +MAPE++ + G VDIW+FG A+L+M T +PPW G ++ L+ ++ RK + P LP +L +L ++L +CF W RP+ + L FL
Sbjct: 136 REMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSD-PADAGGGALKGTP---YFMAPEVLQRKP--HGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYAL--LQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFL 350
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.500e-49 Identity = 93/220 (42.27%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 58 REVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLV-ARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDF 714
+EV MM+ LRH N+V +LG+ G++LFI ++++ GGS+ A+L +FG + VVRRY Q L G++YLH+ +VHRDLK AN+L+D G +I+DFGTS + D + + GTP +MAPE++ +L+ G+PVDIW FG +++M T PW +P++ L L A R P LP LD L LL CF W RPT LL +F
Sbjct: 42 QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINL----DQSSTSMAGTPQ---FMAPEVLQRLDC--GMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPAL--LAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNF 250
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.850e-47 Identity = 99/224 (44.20%), Postives = 132/224 (58.93%), Query Frame = 1
Query: 58 REVQMMRSLRHPNLVAFLGSASRGNE--LFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTP--GTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
+EV +MRSLRH N+V +LGS + + I EWVPGGS++ LL FG L VVR+Y RQ L GLAYLH ++HRD+K AN+LVD G +K+ADFG S V+S G G S L GTP +MAPE++ Q G DIW+ G L+M + +PPW+ + ++ Y C AP +P D+ + LRS L CF +RPT ++LL H FL
Sbjct: 47 QEVGLMRSLRHENIVQYLGSEADAKLRIVSIFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLS---GAAGGSILENHSLRGTPYFMAPEVITQT--GHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNT--NEAPPMPHDISSALRSFLMICFQRLPAERPTANSLLQHPFL 263 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=717bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCATCACCACTCAGGCAGCGGCGCACGTGGTAGTGAACAAGCCCACCAback to top protein sequence of jgi.p|Trimin1|159367 >Trimin1|159367|e_gw1.9.219.1 ID=Trimin1|159367|e_gw1.9.219.1|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=239bp MHHHSGSGARGSEQAHHHHREVQMMRSLRHPNLVAFLGSASRGNELFILQback to top mRNA from alignment at Contig_9:1828729..1832155+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3427bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:1828729..1832155+ >mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=717bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )back to top |