mRNA_3675 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159367
Unique NamemRNA_3675
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YHZ7_9STRA (Kinase-like domain-containing protein (Fragment) n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHZ7_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 4.040e-172
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
Query:    1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL
Sbjct:    1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 239          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YJH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH2_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 4.540e-137
Identity = 203/239 (84.94%), Postives = 210/239 (87.87%), Query Frame = 1
Query:    1 MHHHSGSGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            MHHH+ SGA GSE A XXXREVQMMR LRHPNLVAFLGS SRGNELFILQEWVPGGS+ ALLSSFG LNTKVVR YARQ LHGLAYLHAN I HRDLKCANLLVDAGGNVKIADFGTSAVVSQCRG+HGQ       GTPIYMAPEL+FQ  G  GLPVDIWAFGAAVLEMATA  PWRI GPEGMPSIDYLRCLVA++ APALPLDLDA LRS+L QCFCWRSGDRPTCSALLAHDFL
Sbjct:   87 MHHHARSGASGSEHAXXXXREVQMMRLLRHPNLVAFLGSTSRGNELFILQEWVPGGSLLALLSSFGRLNTKVVRHYARQVLHGLAYLHANTIAHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGNHGQ-----LIGTPIYMAPELLFQ--GKHGLPVDIWAFGAAVLEMATALAPWRIQGPEGMPSIDYLRCLVAKEHAPALPLDLDAALRSMLMQCFCWRSGDRPTCSALLAHDFL 318          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.800e-56
Identity = 105/233 (45.06%), Postives = 142/233 (60.94%), Query Frame = 1
Query:   28 RGSEQ-AHXXXREVQMMRSLRHPNLVAFLGSASRG--NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            RGS++  H   RE+ +MR+  HPN+V++LG+  R   ++L I QEWVPGGSVS+LL  FG  +  + R Y RQAL GLAYLH++ +VHRD+  +N+LVD  G VK+ADFG S  +S   G      L GTP    +MAPE++ +     G+PVD+W+FG AVL+M + +PPW   G    P       L  R + P LP DL A LR+ L +CF W   +RPT + L    FL
Sbjct:   41 RGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTP---YFMAPEVLQR--SAHGMPVDVWSFGGAVLQMVSGEPPWFSYG-VSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFL 267          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.240e-56
Identity = 107/227 (47.14%), Postives = 139/227 (61.23%), Query Frame = 1
Query:   22 GARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALL 702
            GA    + H   REV +M  L+H N V +LG+ S  ++++I Q+W+PGGS+SALL+ FG L+  V R YARQAL GLAYLHAN IVHRDLK  NLL+D  G +KIADFGTSA V    G      L    GTP +MAPE++  L  + GLPVDIW F   VL+M T + PW       +P++  +    A +R P LP D+   +R++L  CF W   +RPT   LL
Sbjct:   47 GAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPD--GAAAAEML----GTPYFMAPEML--LRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTSLPALLSVM-QAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLL 264          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.050e-52
Identity = 102/234 (43.59%), Postives = 141/234 (60.26%), Query Frame = 1
Query:   19 SGARGSEQAHXXXREVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPW--RITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDF 714
            SG R S  A     E+++M+  RH N+V +LG+      ++I+QEWVPGGS++++LS+FG     V + YARQ LHGL YLH+   VHRDLK  N+LV AGG VKIADFGTS  +   + D G  +     GT  +MAPE++ +    QG+ VD+WAF   VL+M T   PW   +   + +P +  LR + A  R P LP DL+ T+R+ LT CF W   +RPT   L+ H +
Sbjct:   37 SGGRSST-ASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQ-----GTLHFMAPEVLQRQP--QGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRL--LRLMQAH-RMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.210e-51
Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 1
Query:   61 EVQMMRSLRHPNLVAFLGSASRGNE--LFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            E+Q+M  L HP++V +LG+  + ++  L I QEWVP GS+ +LL  FG L+  + R+Y RQ L GL YLHAN ++HRD+K  N+LVD  GNVK+ADFG + V+     D+G    M   GTP++MAPE++  L+   G  VD+W+ G AVLEM T +PPW  T    +  I++          P LP DL   LR  L  CF W +G RPT   L+AH++L
Sbjct:  350 EIQVMHKLVHPHIVGYLGAELQDSKRKLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILVDDRGNVKLADFGCALVLKD---DNGDGVEMSMKGTPLFMAPEML--LKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFS---ENPGPPPLPEDLSPALREFLLSCFTWEAGRRPTSHQLVAHEYL 562          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YMG7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 9.340e-51
Identity = 88/162 (54.32%), Postives = 108/162 (66.67%), Query Frame = 1
Query:   61 EVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITG 546
            E  +MR L+HPN+V FLG+ + G EL I QEWVPGGSV+ALLS FG  +  + R YARQAL G+AYLH   I HRD+K +N+LV A G +K+ADFGTS VV       G S      GTP +MAPE++ +     GLPVDIW FG A+L+MAT  PPW   G
Sbjct:   31 EAALMRDLQHPNIVHFLGTETHGTELRIFQEWVPGGSVAALLSRFGPFSEPMTRSYARQALAGIAYLHGRHIAHRDIKGSNMLVGANGVLKLADFGTSVVVPADNTARGISASGSVQGTPYFMAPEVLQR--SAHGLPVDIWGFGGALLQMATGAPPWSAAG 190          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.660e-49
Identity = 100/223 (44.84%), Postives = 137/223 (61.43%), Query Frame = 1
Query:   58 REVQMMRSLRHPNLVAFLGSASR--GNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARK-RAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            RE+ +MR   HPN+V++LG+  R    +L I QEWVPGGSVS+LL  FG  +  + RRY RQAL GL YLH + +VHRD+K +N+LVD  G VK+ADFG S  VS    D G   L GTP    +MAPE++ +     G  VDIW+FG A+L+M T +PPW   G     ++  L+ ++ RK + P LP +L  +L ++L +CF W    RP+ + L    FL
Sbjct:  136 REMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSD-PADAGGGALKGTP---YFMAPEVLQRKP--HGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYAL--LQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFL 350          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 9.500e-49
Identity = 93/220 (42.27%), Postives = 132/220 (60.00%), Query Frame = 1
Query:   58 REVQMMRSLRHPNLVAFLGSASRGNELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLV-ARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDF 714
            +EV MM+ LRH N+V +LG+   G++LFI ++++ GGS+ A+L +FG +   VVRRY  Q L G++YLH+  +VHRDLK AN+L+D  G  +I+DFGTS +      D   + + GTP    +MAPE++ +L+   G+PVDIW FG  +++M T   PW       +P++  L  L  A  R P LP  LD  L  LL  CF W    RPT   LL  +F
Sbjct:   42 QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINL----DQSSTSMAGTPQ---FMAPEVLQRLDC--GMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPAL--LAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNF 250          
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.850e-47
Identity = 99/224 (44.20%), Postives = 132/224 (58.93%), Query Frame = 1
Query:   58 REVQMMRSLRHPNLVAFLGSASRGNE--LFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTP--GTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 717
            +EV +MRSLRH N+V +LGS +      + I  EWVPGGS++ LL  FG L   VVR+Y RQ L GLAYLH   ++HRD+K AN+LVD  G +K+ADFG S V+S   G  G S L      GTP +MAPE++ Q     G   DIW+ G   L+M + +PPW+      + ++ Y  C      AP +P D+ + LRS L  CF     +RPT ++LL H FL
Sbjct:   47 QEVGLMRSLRHENIVQYLGSEADAKLRIVSIFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLS---GAAGGSILENHSLRGTPYFMAPEVITQT--GHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNT--NEAPPMPHDISSALRSFLMICFQRLPAERPTANSLLQHPFL 263          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159367 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YHZ7_9STRA4.040e-172100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YJH2_9STRA4.540e-13784.94Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLS7_9STRA1.800e-5645.06Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YKW2_9STRA5.240e-5647.14Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YJU3_9STRA6.050e-5243.59Kinase-like domain-containing protein (Fragment) n... [more]
D8LMN1_ECTSI1.210e-5144.34Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835YMG7_9STRA9.340e-5154.32Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLD7_9STRA1.660e-4944.84Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YTJ7_9STRA9.500e-4942.27Kinase-like domain-containing protein (Fragment) n... [more]
A0A2R5G4S8_9STRA3.850e-4744.20Mitogen-activated protein kinase kinase kinase NPK... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1828729..1832155 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159367|e_gw1.9.219.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04011,ko04139,map04011,map04139
KEGG koko:K11229
EC2.7.11.25
DescriptionMAP kinase kinase kinase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
Evalue1.98e-52
Seed ortholog2880.D8LMN1
Hectar predicted targeting categoryother localisation
TranscriptId159689
TrackFilteredModels1
ProteinId159367
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159367gene_3675Tribonema minus UTEX_B_3156 geneContig_9 1828729..1832155 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3675_1exon_3675_1Tribonema minus UTEX_B_3156 exonContig_9 1828729..1828839 +
exon_3675_2exon_3675_2Tribonema minus UTEX_B_3156 exonContig_9 1830513..1830796 +
exon_3675_3exon_3675_3Tribonema minus UTEX_B_3156 exonContig_9 1831834..1832155 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3675CDS_3675Tribonema minus UTEX_B_3156 CDSContig_9 1828729..1828839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159367Trimin1|159367|e_gw1.9.219.1Tribonema minus UTEX_B_3156 polypeptideContig_9 1828729..1832155 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=717bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATCACCACTCAGGCAGCGGCGCACGTGGTAGTGAACAAGCCCACCA
CCATCACCGCGAAGTGCAGATGATGCGGTCGCTGCGGCACCCGAACCTCG
TGGCATTTCTGGGGTCCGCATCGCGCGGCAACGAGCTCTTCATTCTCCAG
GAGTGGGTCCCGGGCGGCAGCGTTTCGGCGCTGCTGTCGTCCTTCGGCTG
CCTCAACACGAAGGTCGTGCGCCGCTACGCGCGCCAGGCGCTGCACGGTC
TGGCCTACCTGCACGCCAACGCCATCGTGCACCGCGACCTCAAGTGCGCG
AACCTGCTCGTAGACGCCGGCGGCAACGTCAAGATCGCCGACTTTGGCAC
CAGCGCCGTGGTGTCCCAGTGTCGCGGCGATCACGGCCAGTCCAGGCTTA
TGGGTACCCCCGGAACGCCCATTTACATGGCGCCCGAGCTGATGTTCCAA
CTTGAAGGCAACCAGGGCCTGCCCGTTGACATCTGGGCATTCGGCGCGGC
CGTGCTCGAGATGGCCACCGCCCAACCGCCCTGGCGCATCACAGGCCCCG
AAGGCATGCCGAGCATCGACTATCTGCGCTGCTTGGTGGCCAGGAAGCGT
GCGCCTGCGCTGCCGCTCGATCTCGACGCCACGCTGCGTTCACTGCTCAC
GCAGTGCTTCTGCTGGCGCTCCGGGGACCGGCCCACCTGCTCGGCGCTGC
TCGCGCACGACTTCCTG
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protein sequence of jgi.p|Trimin1|159367

>Trimin1|159367|e_gw1.9.219.1 ID=Trimin1|159367|e_gw1.9.219.1|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=239bp
MHHHSGSGARGSEQAHHHHREVQMMRSLRHPNLVAFLGSASRGNELFILQ
EWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCA
NLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQ
LEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKR
APALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL
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mRNA from alignment at Contig_9:1828729..1832155+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3427bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )
ATGCATCACCACTCAGGCAGCGGCGCACGTGGTAGTGAACAAGCCCACCA CCATCACCGCGAAGTGCAGATGATGCGGTCGCTGCGGCACCCGAACCTCG TGGCATTTCTGGTGAGTCATCGTTGCCAACGCACCCATGTGGTGTGCCGA AACGAATAAATGATGTGTTGGCGGCGTATCTGCTCTCGGTCGGTTGAGCT TGACGGGCTGTGGCAACTACAGCTCGTTTTCATCATCACACAGGAGCTGA GCCTTACTGATACGCACAGGCCGTGCAGAGAGGAGACAAAGGTGGACCTG TCGCAGGCAGCGCGCAGGCGCCAACGTGTGCGCCGCGCCAGAGCTGAGCA AACGAACAGTAGTAGTGACTATGTAGGAGAAACCAGAGGAGTGTAACCGA AACGTAACATCCATTCTCAACAGGTAGTCGCAAGTACGTCATCACGTAAC ATGCAACTGATGAGTGCTGATGCTGAATCAGACACTAGAATATGAGTGAG GTCCATAATCCAACACTGAGCTCGTCGCTCGCGCACGAGCTCTCCAAGCG TATTTGCGCATGTGCGTGGAATTGTGACGACAGGCAGGGATACACACCCA GTGTCTGCGCCGCTTTGCGTTAGGCCGCGCTGAGAGACGGCAACAGCACA TGAGCCCCTGCACTGTGCTTTCCGTCGGGGCTCGACTGACTTTGCATGTA CACTTGAGACTACGCGCTACGCAAGGAACGCAAAGGCCGTAGCCGGCGGC GGTGGTCACCAGTCTTCCTTGCGTGCGATGGTATGAACGAATCGAAAGAT CGTAGAGCTCTAGGTGACAAGGGATGGTCAGGTATAGCGGATGCTGTGAC AGGCTATAGCATGCCAAGGGGAGCAAAGCCTCTTCAATTGGTGTTATGCT TTTGATGTCATTTGGTGCGACCAGCACGGCTTGCAGCCATGCAATGCTGG CAGGAAGTGGCAACTCACAGTATCTCTTTGTTGCTGAGCACACTATGTAG TAAAGGCTGCAGAGTGTTGCTGTTGAGCACACTTAGGCTGCTCTGGTGGT GCAGTGGTGAGCGTGTGCAAGCATGGCTCATGAGTGTGCGTCAGCCCTCC TTGCCTCAGCTGCTGTGCTCATACGACCACCACTGCACACTGCGCAGTAG ATGGCTGCGCCACCGCATTGTTCAACAACTTCGGTGCTGCAATGTGCAGC TTCTATGCGGGGGTTTGTGATTCGTGCTGTCCAACGAGCTTGCGATCAGC AAGTCCGCGCCTCCCGCGCAGCTGACACGACGCCTTGCCACCAGTCGTTT CTGTCGTGATCATGTGTCGTGCCGCGGTAGAAGCGGCTTCCGCTTGCGAC TGCAAGCACGCGCACACTGCCAGTCTCTTGTTGTAGAACGCTGAGCACTT GGCATGTAGAATTGTCCTGTCACTTTGCAGACCTCAGCGAAGTCGTGCAG TATGGTGGTACTGTTTGACTTGTGGCCAATTGCTGCAGCACCGGCGACCG CGGTTGTCGGTGGAAGGCACTTCCGGCCAACCATCCCTTGTCACCTAGAG CTCTATGGGCTTTTGATTCGTCTTCATTGAGATGCGCACTCGCCCCTGAC TGAGCCATGCTGCACGCAGGGGTCCACATCGCGCGGCAACGAGCACACTG TTTTGTTGTAGCACGTTGAGCACTTGGCATGTAGAATCGTCCTGTCTCGT TGCAGACCGCAGCGAAGCCGTAAAGTACTGAGCGTGCGCACTCGCCCCTG ACTGAGCCATGCTGCCCACGCACGCTGCACACAGGGGTCCGCATCGCGCG GCAACGAGCTCTTCATTCTCCAGGAGTGGGTCCCGGGCGGCAGCGTTTCG GCGCTGCTGTCGTCCTTCGGCTGCCTCAACACGAAGGTCGTGCGCCGCTA CGCGCGCCAGGCGCTGCACGGTCTGGCCTACCTGCACGCCAACGCCATCG TGCACCGCGACCTCAAGTGCGCGAACCTGCTCGTAGACGCCGGCGGCAAC GTCAAGATCGCCGACTTTGGCACCAGCGCCGTGGTGTCCCAGTGTCGCGG CGATCACGGCCAGTCCAGGTCAGTGGCCCGCTAGACATCGCGATGACTTT CCGCCTGCTAGCGGTATTGACAACTTGTTCTGAGACTGGCGCCTCATTCT GCTGCAAAGATAGACTTGCTCGTGGACGTCGGCGGCGACGTCAAGGCCGC CGACTTTGGCACCATCGCCGCGGTGTCCCAGTGTTGTGGTGGCCGTGGCG GTGCGTGCCGGTCCATGTTGAAATTGTCGTTTTGAAGTTGGTCCACTGAC CAATCAGCGGTGTGTGGGAGCAAACGCGATCCCTTCTTAGCAGTGCCGTG ATCATTTAGACCGTGTCTGGCGACACCACCTACAGCTGTCATGCTCCTGG TAGGGGCGCTGCAGTGTTGCAACGCTGGTCTGCTGCACGTGTAACTTACT CGTGACAGGTTTGCCGCTCCCCAAGCAGACACGGCCGAGATGTACATGAT GGCAGTCTTGTTCAATCGTCGAAGTTTGTTGTGACATTATCATCTGCATC AGCTTGAGAGCCAGCACCAGCACCGTGGTTTGCACCCTCACCACCTTGCT CTGTCATCAACAGCTATAGTGCATCGTGAAAGGCTGATCAGCGTACAGCG ACATCGTCAGCAGGTCATTCAGCAGTTGACCCAAGCGACGCCATTTCAAT CGTCTCCTGTTGACGCCAGCTGTTGCCGTTACGGGAGGACTCCGCACTTG TGGCGCCGTCGTCGCACCTGCACGTGCTGTGTCATGCGTCGACGCATTAG TAATATATGCGCGGTAGCAACTAGTTGTCTCACATGTAGCACCCCTGCCT GCCCTCAGCACCGTGACGCCACCCATACTCATTGCTGATCACACCCCTAG GCTCACAGGTACATGAACATGGAGCAGGAGCAATGCTGCACTTCTAGCCG TTTACGAGCTTTGACACACTGCTTATGAATCCGGCAAACGTCAGCTCTGT GATGCCAACTTCATATCATCGCTGATCGCACCCCTAGGCTTACTGGTACC GGCAAACATCAACTTTGTGGTGCTAACTTCATATCATCGCTGATCGCACC CGTAGGCTTATGGGTACCCCCGGAACGCCCATTTACATGGCGCCCGAGCT GATGTTCCAACTTGAAGGCAACCAGGGCCTGCCCGTTGACATCTGGGCAT TCGGCGCGGCCGTGCTCGAGATGGCCACCGCCCAACCGCCCTGGCGCATC ACAGGCCCCGAAGGCATGCCGAGCATCGACTATCTGCGCTGCTTGGTGGC CAGGAAGCGTGCGCCTGCGCTGCCGCTCGATCTCGACGCCACGCTGCGTT CACTGCTCACGCAGTGCTTCTGCTGGCGCTCCGGGGACCGGCCCACCTGC TCGGCGCTGCTCGCGCACGACTTCCTG
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Coding sequence (CDS) from alignment at Contig_9:1828729..1832155+

>mRNA_3675 ID=mRNA_3675|Name=jgi.p|Trimin1|159367|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=717bp|location=Sequence derived from alignment at Contig_9:1828729..1832155+ (Tribonema minus UTEX_B_3156 )
ATGCATCACCACTCAGGCAGCGGCGCACGTGGTAGTGAACAAGCCCACCA
CCATCACCGCGAAGTGCAGATGATGCGGTCGCTGCGGCACCCGAACCTCG
TGGCATTTCTGGGGTCCGCATCGCGCGGCAACGAGCTCTTCATTCTCCAG
GAGTGGGTCCCGGGCGGCAGCGTTTCGGCGCTGCTGTCGTCCTTCGGCTG
CCTCAACACGAAGGTCGTGCGCCGCTACGCGCGCCAGGCGCTGCACGGTC
TGGCCTACCTGCACGCCAACGCCATCGTGCACCGCGACCTCAAGTGCGCG
AACCTGCTCGTAGACGCCGGCGGCAACGTCAAGATCGCCGACTTTGGCAC
CAGCGCCGTGGTGTCCCAGTGTCGCGGCGATCACGGCCAGTCCAGGCTTA
TGGGTACCCCCGGAACGCCCATTTACATGGCGCCCGAGCTGATGTTCCAA
CTTGAAGGCAACCAGGGCCTGCCCGTTGACATCTGGGCATTCGGCGCGGC
CGTGCTCGAGATGGCCACCGCCCAACCGCCCTGGCGCATCACAGGCCCCG
AAGGCATGCCGAGCATCGACTATCTGCGCTGCTTGGTGGCCAGGAAGCGT
GCGCCTGCGCTGCCGCTCGATCTCGACGCCACGCTGCGTTCACTGCTCAC
GCAGTGCTTCTGCTGGCGCTCCGGGGACCGGCCCACCTGCTCGGCGCTGC
TCGCGCACGACTTCCTG
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