mRNA_3656 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159484
Unique NamemRNA_3656
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA)

HSP 1 Score: 546 bits (1406), Expect = 7.850e-196
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1 
Query:    1 MVGPVCVQTASEAELPLGFKAASANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDEXXXXXXXXXXGSNHGAQSAXXDAAADGAAWDSDEVSTCSTEDAWGADATAVMDL 858
            MVGPVCVQTASEAELPLGFKAASANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDEXXXXXXXXXXGSNHGAQSAXXDAAADGAAWDSDEVSTCSTEDAWGADATAVMDL
Sbjct:    1 MVGPVCVQTASEAELPLGFKAASANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDEXXXXXXXXXXGSNHGAQSAXXDAAADGAAWDSDEVSTCSTEDAWGADATAVMDL 286
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA)

HSP 1 Score: 325 bits (832), Expect = 7.810e-110
Identity = 156/195 (80.00%), Postives = 176/195 (90.26%), Query Frame = 1 
Query:   85 LTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLRE 663
            LTV+LDMDECLLHSKFHG G++   YRQ+E+RPE +GEVNSF + LDDGVAQVNIRPGLH+FLE+LA+ CDVVVFTAAMPDYAGPVLD++DPTG+LIS+RLYR+SCRQVRG FLKDLS LG  F  +PGRCVLLDNNPCSFLCQPTNGILVTSFYDDA DTALA V+QLV+ LE  PDVRPILRDMFRLE+LL+E
Sbjct:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 7.930e-89
Identity = 141/207 (68.12%), Postives = 165/207 (79.71%), Query Frame = 1 
Query:   85 LTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDG-VAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDE 696
            +TV+LDMDECLLHSKFHG G+    YRQ EERP+ + EVNSF + LDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD +DP G L  +RLYRSSCRQV+GAFLKDLSVLG V      R VL+DNNP SF+CQPTNGILV SFYDD  DTALASV+QL++HL+ A DVRPIL+DMFRL++LL EYR  LF ++D+
Sbjct:    1 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLG-VESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDD 206
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 3.360e-88
Identity = 143/208 (68.75%), Postives = 166/208 (79.81%), Query Frame = 1 
Query:   82 RLTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDG-VAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDE 696
            ++TV+LDMDECLLHSKFHG G+    YRQ EERP  + EVNSF + LDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD +DP G L  +RLYRSSCRQV+GAFLKDLSVLG V      R VL+DNNP SF+CQPTNGILV SFYDD  DTALASV+QL++HL+ A DVRPIL+DMFRL++LL EYRA LF +ED+
Sbjct:  126 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEERPNAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLG-VESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRAALFDDEDD 332
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.220e-56
Identity = 106/209 (50.72%), Postives = 138/209 (66.03%), Query Frame = 1 
Query:   58 KAASANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEV-NSFCIPLDDGV-AQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAML 678
            +AA A  ERL ++LDMDECL+HSKF     ++YRQ E RPE++    +SF I +DDG  A VN RPGL  FLEE AK  DV VFTA +  Y  P+LD+LDP G L + R +R+SC+Q +G FLKDLSV+         R +L+DNNP SFL QP+NGI V SFYDD  D  L S+ +++  L+   DVRP L  +FRL  LL E++ ++
Sbjct:   34 RAAGAGQERLALVLDMDECLVHSKFQN--EVEYRQSEYRPEELEAYGDSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQRKGMFLKDLSVVRTDLS----RVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAEHQRVI 236
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM)

HSP 1 Score: 188 bits (478), Expect = 1.330e-55
Identity = 106/205 (51.71%), Postives = 135/205 (65.85%), Query Frame = 1 
Query:   70 ANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGE-VNSFCIPLDDGV-AQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAML 678
            A  ERL ++LDMDECL+HSKF     ++YRQ E RPE + +  +SF I +DDG  A VN RPGL  FLEE AK  DV VFTA +  Y  P+LD+LDP G L + R +R SC+Q +G FLKDLSV   V      R +L+DNNP SFL QP+NGI V SFYDDA D  L S+ +++  L+   DVRP L  +FRL  LL E++ ++
Sbjct:   36 APCERLALVLDMDECLVHSKFQN--EVEYRQSEFRPEQLEDFADSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQRKGMFLKDLSV---VRGGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAEHQRVI 235
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.060e-54
Identity = 101/202 (50.00%), Postives = 134/202 (66.34%), Query Frame = 1 
Query:   79 ERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGE-VNSFCIPLDDGV-AQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAML 678
            ER+ ++LDMDECL+HSKF     ++YRQ E RPE + E ++SF I ++DG  A VN RPGL  FLEE AK  DV VFTA +  Y  P+LD LDP G L +   +R SC+Q +G FLKDLSV+    D    R +L+DNNP SFL QP+NGI V SFYDD +D  L S+ +++  ++   DVRP L  +FRL  LL E++ ++
Sbjct:   39 ERIALVLDMDECLVHSKFQN--EVEYRQNEYRPEQLEEYIDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQRKGMFLKDLSVIR---DGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAEHQRVI 235
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: K3WRS1_GLOUD (FCP1 homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS1_GLOUD)

HSP 1 Score: 184 bits (468), Expect = 8.430e-54
Identity = 104/228 (45.61%), Postives = 141/228 (61.84%), Query Frame = 1 
Query:    1 MVGPVCVQTASEAELPLGFKAASANLERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVN-SFCIPLDDGV-AQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAML 678
            +V PV  +  S         ++    ER+ ++LDMDECL+HSKF+    ++YRQ E RP  + + + SF I +DDG  A V+ RPGL  FLEE +K  DV VFTA +  Y  P+LD+LDP G L + R +R SC+Q +G FLKDL V+     K   + +L+DNNP SFL QP+NGI V SFYDDA D  L S+ +++  L    DVRP L  +FRL  LL E++ M+
Sbjct:   37 VVSPVVARPLSGCHAASSVPSSPVEEERIALVLDMDECLVHSKFYN--EVEYRQSEYRPTALAQYDDSFEIVMDDGERAIVHKRPGLDKFLEEASKHFDVYVFTAGLEAYGKPILDELDPKGTLFTGRFFRESCQQRKGMFLKDLRVVR----KDLSKVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLTKVLTSLRELDDVRPRLHQLFRLADLLAEHQRMI 258
[Close]
BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.670e-52
Identity = 105/206 (50.97%), Postives = 136/206 (66.02%), Query Frame = 1 
Query:   79 ERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVNSFCIPLDDGVAQV--NIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRG-AFLKDLS-VLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFP 684
            ++LTV+LD+DECL+HS F       YRQ E RPE+I  V+S  + L  GV  V  N RPGL  FLE+L+    VVVFTA   +YA  VLD +DP G     RLYR SCRQ RG  +LKDL   +G   +    R VL+DN+P SF+CQP+NGILV+S+YDD  D AL+SVL+L++HL+   DVRP L  +F LE +L+EY+ +  P
Sbjct:   16 QKLTVVLDLDECLVHSVFPN--GDKYRQSEARPENINLVDSMHLVLG-GVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALE----RTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEVSAP 214
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BLAST of jgi.p|Trimin1|159484 vs. uniprot
Match: A0A484EEH1_BRELC (FCP1 homology domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEH1_BRELC)

HSP 1 Score: 177 bits (448), Expect = 4.290e-51
Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = 1 
Query:   79 ERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGE-VNSFCIPLDDGVAQV-NIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAML 678
            ER+ ++LDMDECL+HSKF     +++RQ E RPE + +  +SF I ++DG + V N RPGL  FL+E AK  D+ VFTA +  Y  PVLD +DP G L + R +R SC+Q +G FLKDLSV+         R +L+DNNP SFL QP+NGI V SFYDD+ D  L S+ +++  L+   DVRP L  +F L  LL E++ ++
Sbjct:   39 ERIALVLDMDECLVHSKFQN--EVEHRQNEFRPEHLKDYTDSFEIVMNDGESVVVNKRPGLDQFLKEAAKHYDLYVFTAGLEAYGKPVLDAIDPKGNLFAGRFFRESCKQRKGMFLKDLSVIR---GGELSRIILVDNNPVSFLMQPSNGIPVPSFYDDSNDRTLKSLTKVLASLQDVDDVRPRLHQLFHLADLLAEHKRLI 235
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159484 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7A9_9STRA7.850e-196100.00NLI interacting factor-like phosphatase-domain-con... [more]
A0A835Z333_9STRA7.810e-11080.00NLI interacting factor (Fragment) n=1 Tax=Tribonem... [more]
D7FM26_ECTSI7.930e-8968.12Putative nuclear LIM interactor-interacting protei... [more]
A0A6H5L173_9PHAE3.360e-8868.75FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A662Y5D0_9STRA1.220e-5650.72FCP1 homology domain-containing protein n=4 Tax=Pe... [more]
H3GXJ8_PHYRM1.330e-5551.71FCP1 homology domain-containing protein n=12 Tax=P... [more]
A0A3M6VFT3_9STRA1.060e-5450.00FCP1 homology domain-containing protein n=9 Tax=Pe... [more]
K3WRS1_GLOUD8.430e-5445.61FCP1 homology domain-containing protein n=1 Tax=Gl... [more]
A0A836CB86_9STRA1.670e-5250.97Putative CTD small phosphatase-like protein n=1 Ta... [more]
A0A484EEH1_BRELC4.290e-5147.52FCP1 homology domain-containing protein n=1 Tax=Br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1581638..1583206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159484|e_gw1.9.248.1
BRITEko00000,ko01000,ko01009,ko03021
KEGG koko:K15731,ko:K17616
EC3.1.3.16
GOsGO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
Descriptionphosphoprotein phosphatase activity
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5190@1|root,KOG1605@2759|Eukaryota
Evalue1.3e-89
Seed ortholog2880.D7FM26
Hectar predicted targeting categoryother localisation
TranscriptId159806
TrackFilteredModels1
ProteinId159484
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159484gene_3656Tribonema minus UTEX_B_3156 geneContig_9 1581638..1583206 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159484Trimin1|159484|e_gw1.9.248.1Tribonema minus UTEX_B_3156 polypeptideContig_9 1581638..1583206 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3656_3exon_3656_3Tribonema minus UTEX_B_3156 exonContig_9 1581638..1582264 -
exon_3656_2exon_3656_2Tribonema minus UTEX_B_3156 exonContig_9 1582613..1582735 -
exon_3656_1exon_3656_1Tribonema minus UTEX_B_3156 exonContig_9 1583096..1583206 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3656CDS_3656Tribonema minus UTEX_B_3156 CDSContig_9 1583096..1583206 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3656 ID=mRNA_3656|Name=jgi.p|Trimin1|159484|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=861bp|location=Sequence derived from alignment at Contig_9:1581638..1583206- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGGGCCAGTGTGCGTGCAGACGGCGAGCGAGGCGGAGCTGCCCCT
GGGCTTCAAGGCGGCGTCCGCAAACCTGGAGCGATTGACCGTCATTTTGG
ACATGGACGAGTGCCTTCTGCACAGCAAGTTCCACGGCCTGGGCTCCATT
GACTATAGGCAGCAGGAGGAGCGGCCGGAGGACATCGGCGAAGTGAACTC
CTTTTGCATCCCTCTGGATGATGGCGTGGCGCAGGTTAACATCAGGCCCG
GGCTGCACGACTTCCTCGAGGAGCTGGCAAAGACTTGCGACGTTGTCGTC
TTCACAGCTGCGATGCCAGACTACGCTGGTCCCGTTCTCGACAAGCTCGA
CCCCACCGGCAGGCTCATCTCAAAGCGCCTCTACCGGTCCTCCTGCCGGC
AAGTGCGGGGCGCGTTCCTCAAGGACCTGAGCGTCCTCGGGCCCGTCTTC
GACAAGCACCCCGGGCGCTGCGTCCTCCTCGACAACAACCCGTGCAGCTT
CCTGTGCCAGCCCACGAACGGCATCCTCGTCACCTCGTTCTACGACGACG
CGGAGGACACGGCGCTGGCGAGCGTCCTGCAGCTCGTGCAGCACCTCGAG
CACGCGCCCGACGTGCGCCCTATCCTGCGCGACATGTTCCGCCTCGAGTC
GCTGCTGCGCGAGTACCGCGCGATGCTCTTCCCCGAGGAGGACGAGCAGC
AGCAGGAGAAGGAGAACGCCGCCGCCGGCAGCAACCACGGCGCCCAGTCC
GCTGCCGCCGACGCTGCTGCGGACGGCGCAGCGTGGGACAGCGACGAGGT
GTCCACGTGCAGCACGGAGGACGCGTGGGGCGCAGATGCGACCGCGGTCA
TGGATCTGTGA
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protein sequence of jgi.p|Trimin1|159484

>Trimin1|159484|e_gw1.9.248.1 ID=Trimin1|159484|e_gw1.9.248.1|Name=jgi.p|Trimin1|159484|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=287bp
MVGPVCVQTASEAELPLGFKAASANLERLTVILDMDECLLHSKFHGLGSI
DYRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVV
FTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVF
DKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLE
HAPDVRPILRDMFRLESLLREYRAMLFPEEDEQQQEKENAAAGSNHGAQS
AAADAAADGAAWDSDEVSTCSTEDAWGADATAVMDL*
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mRNA from alignment at Contig_9:1581638..1583206-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3656 ID=mRNA_3656|Name=jgi.p|Trimin1|159484|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1569bp|location=Sequence derived from alignment at Contig_9:1581638..1583206- (Tribonema minus UTEX_B_3156 )
ATGGTGGGGCCAGTGTGCGTGCAGACGGCGAGCGAGGCGGAGCTGCCCCT
GGGCTTCAAGGCGGCGTCCGCAAACCTGGAGCGATTGACCGTCATTTTGG
ACATGGACGAGGTCAGTGTTCTGATGGCTTCTCTAGCCAGTGCCGCGGGC
GCCCGGCACTTGGCTGCCCAGGGGTTGATCTGAGATAGTTACTAAACATG
GTGGAGGTTGCTGGCGGTCTGGGCACGCCCAGCATGCCTCGCTCGGCTGG
TAGTCAGTGCATTTGTCCGTTGTGGCGGGTGAGGGGTGCTTTTTTACTTG
TGGCGGTCCCAGGCACCGTCCAGGCGGGAGGAGAGCGTTTGTTGCTCATG
GTTATGCACTATGCAAGCACCTGCTGCCCACTCTGTTGACGACAGCCGCT
GCCTGCGTTTCTCCGGTGGCCACATTTTCTTACCCGCGACTTCATTTTCT
TTGTCTGGTGCCTCCCTGCAGTGCCTTCTGCACAGCAAGTTCCACGGCCT
GGGCTCCATTGACTATAGGCAGCAGGAGGAGCGGCCGGAGGACATCGGCG
AAGTGAACTCCTTTTGCATCCCTCTGGATGATGGCGTGGCGCAGGTGAGA
TAACGCGGGAACGAAATCATACTTGCCACATCAGTTTCAGCCTCACCGCA
GAGCGTTGCTGCCTCGATAGCATTGATTGATGGCCGTCTTCAGAGCTTCA
GCTGCTGTGCGGGCATCCGCACTCGCAGAGGGCTGTCACTAGCTTGGTAG
CAGTTGACGTAACCCCAGCACTTTCCACTTTCTGAGCGATCGGACGCATC
AGGTCGTTGCATGAGATTACCACTGGTGCCATGGTGAAATACTTTGCGCC
ATCTGCTTTCATGCCTGCAGAGCGCCGCAATCTAGTCGCTGATATCTGGA
AACTGATTTATTTTTGTTTTGATCTTGATGTTCAACTTGCAGGTTAACAT
CAGGCCCGGGCTGCACGACTTCCTCGAGGAGCTGGCAAAGACTTGCGACG
TTGTCGTCTTCACAGCTGCGATGCCAGACTACGCTGGTCCCGTTCTCGAC
AAGCTCGACCCCACCGGCAGGCTCATCTCAAAGCGCCTCTACCGGTCCTC
CTGCCGGCAAGTGCGGGGCGCGTTCCTCAAGGACCTGAGCGTCCTCGGGC
CCGTCTTCGACAAGCACCCCGGGCGCTGCGTCCTCCTCGACAACAACCCG
TGCAGCTTCCTGTGCCAGCCCACGAACGGCATCCTCGTCACCTCGTTCTA
CGACGACGCGGAGGACACGGCGCTGGCGAGCGTCCTGCAGCTCGTGCAGC
ACCTCGAGCACGCGCCCGACGTGCGCCCTATCCTGCGCGACATGTTCCGC
CTCGAGTCGCTGCTGCGCGAGTACCGCGCGATGCTCTTCCCCGAGGAGGA
CGAGCAGCAGCAGGAGAAGGAGAACGCCGCCGCCGGCAGCAACCACGGCG
CCCAGTCCGCTGCCGCCGACGCTGCTGCGGACGGCGCAGCGTGGGACAGC
GACGAGGTGTCCACGTGCAGCACGGAGGACGCGTGGGGCGCAGATGCGAC
CGCGGTCATGGATCTGTGA
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Coding sequence (CDS) from alignment at Contig_9:1581638..1583206-

>mRNA_3656 ID=mRNA_3656|Name=jgi.p|Trimin1|159484|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=861bp|location=Sequence derived from alignment at Contig_9:1581638..1583206- (Tribonema minus UTEX_B_3156 )
ATGGTGGGGCCAGTGTGCGTGCAGACGGCGAGCGAGGCGGAGCTGCCCCT
GGGCTTCAAGGCGGCGTCCGCAAACCTGGAGCGATTGACCGTCATTTTGG
ACATGGACGAGTGCCTTCTGCACAGCAAGTTCCACGGCCTGGGCTCCATT
GACTATAGGCAGCAGGAGGAGCGGCCGGAGGACATCGGCGAAGTGAACTC
CTTTTGCATCCCTCTGGATGATGGCGTGGCGCAGGTTAACATCAGGCCCG
GGCTGCACGACTTCCTCGAGGAGCTGGCAAAGACTTGCGACGTTGTCGTC
TTCACAGCTGCGATGCCAGACTACGCTGGTCCCGTTCTCGACAAGCTCGA
CCCCACCGGCAGGCTCATCTCAAAGCGCCTCTACCGGTCCTCCTGCCGGC
AAGTGCGGGGCGCGTTCCTCAAGGACCTGAGCGTCCTCGGGCCCGTCTTC
GACAAGCACCCCGGGCGCTGCGTCCTCCTCGACAACAACCCGTGCAGCTT
CCTGTGCCAGCCCACGAACGGCATCCTCGTCACCTCGTTCTACGACGACG
CGGAGGACACGGCGCTGGCGAGCGTCCTGCAGCTCGTGCAGCACCTCGAG
CACGCGCCCGACGTGCGCCCTATCCTGCGCGACATGTTCCGCCTCGAGTC
GCTGCTGCGCGAGTACCGCGCGATGCTCTTCCCCGAGGAGGACGAGCAGC
AGCAGGAGAAGGAGAACGCCGCCGCCGGCAGCAACCACGGCGCCCAGTCC
GCTGCCGCCGACGCTGCTGCGGACGGCGCAGCGTGGGACAGCGACGAGGT
GTCCACGTGCAGCACGGAGGACGCGTGGGGCGCAGATGCGACCGCGGTCA
TGGATCTGTGA
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