mRNA_364 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A835YXA5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA5_9STRA) HSP 1 Score: 505 bits (1300), Expect = 2.990e-181 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1 Query: 1 MSAFHGAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPEKLPEGAVVHDDMPRFRQVIGTSILAREAPASM 717 MSAFHGAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPEKLPEGAVVHDDMPRFRQVIGTSILAREAPASM Sbjct: 1 MSAFHGAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPEKLPEGAVVHDDMPRFRQVIGTSILAREAPASM 239
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A7S2A7B1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7B1_TRICV) HSP 1 Score: 149 bits (377), Expect = 3.840e-41 Identity = 76/202 (37.62%), Postives = 112/202 (55.45%), Query Frame = 1 Query: 16 GAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTL-HGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPG--WQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQD 612 G ++L + S+ R ++L +WLNDEVI + +L RD C DPSR + +FF + L G + + + + R SK D+F L K P+N+GG+HW + VH ++ RV+Y DSMG G E++EG+ +LK EH+ +KG LP W++ TP+Q NG DCGVF C+ DF+ G P F Q+ Sbjct: 13 GPEEEILARSGTDSVQRHSMQKLAPCSWLNDEVIHYFLLMLAVRDENMCKEDPSRSRSHFFKSFFVTKLLDGPEGYSYKNVKR-WSKKVPGKDIFGLSKIFFPVNVGGVHWTCVAVHMKEKRVQYYDSMGDGGSEYLEGIFKYLKDEHQNKKGCPLPDEEQWELVECTCDTPRQQNGFDCGVFTCMFCDFLSRGCPLTFSQE 213
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A7S2V080_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V080_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.310e-38 Identity = 82/228 (35.96%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 16 GAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRP-CYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPG-WQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPEKLPEGAVVHDDMPRFRQVIGTSIL 693 G + V+ + L R K LE T WL DEVI+ Y LL +R+ ++ A P M++FF + L + + R + LDVFS ++ +VP+N+G MHW VH + R++Y DSMGG G ++ + +L+ E + +K L W+M TPQQ NGCDCGVFAC+ D++ EGLP F Q D MP FR+ I +IL Sbjct: 52 GPPSQVVANLHNVQLQREKIKCLEPTVWLLDEVINLYINLLEDREKRHMAESGRTTPRAVFMNSFFMARLFVDEGYRYANVRRWTRRRK--LDVFSAERVVVPVNVGNMHWCLACVHVPQKRIQYYDSMGGAGRNYLGALAQYLQDEMKDKKKETLDINDWEMVGTVQGTPQQNNGCDCGVFACMFADYVSEGLPLSFSQKD-------------MPLFREKIALAIL 264
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A835ZEF0_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEF0_9STRA) HSP 1 Score: 129 bits (324), Expect = 6.280e-34 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 79 RLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 615 RL WL+ +V++ Y LLNER+A+ A + R + H+F + G + E + R +K V DVF+ + N+ G HW +V ++ R+EY DS GG G+ M+ + ++L+ EH +K LP W S+ ++PQQANG DCGVFA ++++E +PFDFRQDD Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYA---GMCNNGYEGVKRWSTKAKV--DVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A835YY08_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY08_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.490e-33 Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 79 RLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 615 RL WL+ +V++ Y LLNER+A+ A P R + H+F G ER+ + +K V DVF+ + N+ +HW +V + R+EY DS+GG G+ M + ++L+ EH +K LP W S+ ++PQQANG DCGVFA ++I++ +PFDFRQDD Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYK---GMCDNGYERVKKWSTKAKV--DVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A836CHU4_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU4_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.110e-32 Identity = 63/156 (40.38%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 151 AKYC--AADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQD 612 A +C DP R + +++F S L + P + R K V D+F+LDK ++P N+G MHW V++ Q+ R++Y DSMGGRG F+ + +L+ EH+ +KG L W TPQQ NGCDCGVF C+ D+I E LP +F QD Sbjct: 7 ASHCMHGEDPQLRRSHFFNSYFLSKLTENSYNYPG-VRRWTKKAKV--DIFTLDKVIMPANVGNMHWCLAVIYVQERRIQYYDSMGGRGTTFLNALERWLEDEHKDKKGAPLGATWTKVPTIDGTPQQENGCDCGVFTCMFADYISEDLPLEFGQD 159
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A835ZFD9_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD9_9STRA) HSP 1 Score: 125 bits (313), Expect = 7.670e-32 Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 286 LDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 615 LDVF DK L P NIG MHW +VH Q+ R+EY+DSM G G+ M + + K EH +KG L W +SY+ T+PQQ NGCDCGVF D+++ LP DF QDD Sbjct: 89 LDVFEADKILFPHNIGNMHWCLAIVHVQEKRIEYMDSMSGDGLGAMSALFRYFKDEHADKKGSPLKGMWTRYSYRDTSPQQKNGCDCGVFTLPNADYVLGELPLDFHQDD 198
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A3R7HMD8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HMD8_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.120e-29 Identity = 62/202 (30.69%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 16 GAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTL-HGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPP-GWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 615 G ++L + + R + L TWLNDE+I+ Y ++++RD + + + + ++FF + + G + R ++ +D+FS+DK +P+N+G MHW + + R++Y DSMGG G + +L +L+ E +K ++ GW++ S TP Q NG DCGVF+C+ D++ +GLP F Q D Sbjct: 607 GPMEEILVNKYNVDITRHHLQCLLPGTWLNDEIINFYFQMMSDRDEELVKSGVLEKRSHFFNSFFYTKVSEGGYNFINVR------RWTRKIDLFSMDKIFMPVNVGNMHWCMAAIFMTEKRIQYFDSMGGAGTACLNVLLRYLRDESEHKKKQKFDDEGWELVSTMPNTPSQTNGSDCGVFSCMFADYLSQGLPLSFTQRD 802
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A7S2G205_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G205_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.840e-28 Identity = 62/194 (31.96%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 76 KRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTP------ERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRE----LPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPEKL 627 +RL +WL DEVI+ Y +LL ERD + DP+R+P + +++F + + +R SR + DVF LDK +P+NI HW V ++ + Y DSMGG G +++ G+ + K E + KG+ + W++ TPQQ+NG DCGVF T +++ + L F D + Sbjct: 104 QRLSPASWLFDEVINVYMFLLQERDDELRRQDPTRKPSHFFNSYFFEKMFEPDGRNRYDYSQIKRWSRKIKSTTPKGDVFELDKMFIPVNISNSHWTLAVAFVKEKKFVYYDSMGGSGRDYIAGLKQYFKDEAKA-KGKANWETIVDDWEVVLGSRNTPQQSNGSDCGVFTSTTANYLAQDLELRFSSLDADNF 296
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Match: A0A8K1CG44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG44_PYTOL) HSP 1 Score: 119 bits (297), Expect = 1.540e-27 Identity = 65/206 (31.55%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 10 FHGAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTL-HGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPP-GWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDDPE 621 + G DVL + R + L WLNDEVI+ + +L +RDA+ + +P + +FF + + G + R ++ +D+FS+DK VP+N+ HW V+ + R++Y DSM G G + +E +L +L E + +K + GW++ TPQQ NG DCGVF C+ D++ + L F Q+D E Sbjct: 229 YEGLHQDVLIQKYNVDITRRHLQCLLPQQWLNDEVINFWFQMLMDRDAELVKSGVLEKPSHFFSSFFYTKVSEGGYNFINVR------RWTRKIDLFSMDKIFVPVNVSNTHWCLAVIFMTEKRIQYFDSMAGPGTKCLEVLLKYLHDEMQHKKQQPFDSEGWELVETVPGTPQQENGWDCGVFTCLFADYLSQNLDLSFSQNDME 428 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157183 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_364 ID=mRNA_364|Name=jgi.p|Trimin1|157183|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=720bp|location=Sequence derived from alignment at Contig_3:1009000..1009719- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGGCATTCCACGGCGCCGCCGCCGACGTGCTGTTCGACGCCCCGCAback to top protein sequence of jgi.p|Trimin1|157183 >Trimin1|157183|e_gw1.3.434.1 ID=Trimin1|157183|e_gw1.3.434.1|Name=jgi.p|Trimin1|157183|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp MSAFHGAAADVLFDAPQRSLPRSGFKRLEGTTWLNDEVISAYTWLLNERDback to top mRNA from alignment at Contig_3:1009000..1009719- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_364 ID=mRNA_364|Name=jgi.p|Trimin1|157183|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=720bp|location=Sequence derived from alignment at Contig_3:1009000..1009719- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1009000..1009719- >mRNA_364 ID=mRNA_364|Name=jgi.p|Trimin1|157183|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_3:1009000..1009719- (Tribonema minus UTEX_B_3156 )back to top |