mRNA_3591 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836C8E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E5_9STRA) HSP 1 Score: 993 bits (2566), Expect = 0.000e+0 Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 1 Query: 1 MQSQAYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHITERDALIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLNDNXXXXXXXXXXXXXXXXNAANGFHVYEYGRTLHSGTDGGRERMLEGGDWWNGIDNVANPVFKRFRGYLDTGNPIFKLGIGEVIDWRDCDRWGELGWGPVDTDTSASVPAQGMSEALRISWVNVSYQHPTTQRMDRDYWKTTQTELSSSDFSPTVTGAIVSLAMTAAALIATCVGVGDIVDFFQRVFLLNKYTGPVAEVDSKALAKLLTATVFAFSIITPAALEMIDDISVQNENPNGHGSVVRWVEGQAQGFGAYKITAAVSLQYTCSYSSVASAIIYINVALAVGTLGICIFKIAPYEGPKGN 1530 MQSQAYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHITERDALIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLNDNXXXXXXXXXXXXXXXXNAANGFHVYEYGRTLHSGTDGGRERMLEGGDWWNGIDNVANPVFKRFRGYLDTGNPIFKLGIGEVIDWRDCDRWGELGWGPVDTDTSASVPAQGMSEALRISWVNVSYQHPTTQRMDRDYWKTTQTELSSSDFSPTVTGAIVSLAMTAAALIATCVGVGDIVDFFQRVFLLNKYTGPVAEVDSKALAKLLTATVFAFSIITPAALEMIDDISVQNENPNGHGSVVRWVEGQAQGFGAYKITAAVSLQYTCSYSSVASAIIYINVALAVGTLGICIFKIAPYEGPKGN Sbjct: 1 MQSQAYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHITERDALIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLNDNXXXXXXXXXXXXXXXXNAANGFHVYEYGRTLHSGTDGGRERMLEGGDWWNGIDNVANPVFKRFRGYLDTGNPIFKLGIGEVIDWRDCDRWGELGWGPVDTDTSASVPAQGMSEALRISWVNVSYQHPTTQRMDRDYWKTTQTELSSSDFSPTVTGAIVSLAMTAAALIATCVGVGDIVDFFQRVFLLNKYTGPVAEVDSKALAKLLTATVFAFSIITPAALEMIDDISVQNENPNGHGSVVRWVEGQAQGFGAYKITAAVSLQYTCSYSSVASAIIYINVALAVGTLGICIFKIAPYEGPKGN 510
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836CMJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ6_9STRA) HSP 1 Score: 256 bits (653), Expect = 6.800e-73 Identity = 198/650 (30.46%), Postives = 278/650 (42.77%), Query Frame = 1 Query: 13 AYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVP----ANSSEPIKAP-STDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHITERDALIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLN-----------DNXXXXXXXXXXXXXXXXNAAN-------GFHVYEYGRTLHSGTDGGRERM--------------------------------------LEGGDWWNGI---------DNVANPVFKRFRGYLDTGNPIFKLGI--------------------------------GEVIDWRDCDRWGELGWGPVDTDTSASVPAQGMSEALRISWVNVSYQHPTTQRMDRDYWKTTQ------------------------------------TELSSSDFSPTVTGAIVSLAMTAAALIATCVGVGDIVDFF-------QRVFLLNKYTGPVAEVDSKA-----------LAKLLTATVFAFSIITPAALEMIDDISVQNENPNGHGSVVRWVEGQAQGFGAYKITAAVSLQYTCSYSSVASAIIYINVALA-VGTLGIC 1491 +Y C D+ GQ+ +C+M G+G+ S D+ + RF D+ N+ + A STD+ +RG LADY L ++TSRL K++TG AQVDL+LC D DC+ +ADL+ + A DP AN+TLA+GYSR+ G V+ L G NWDL+ + IGNYL +CVTI+ F H +M GW+K + + N + G ++EYGRTL+ + + L GDWWNG D +NPV + R NP+ KL G+ +DWR CD WG L WG VDT AQ +SEAL +SW NVSY H T R WK+T L++SDF+ T+ GA+ ++A++ L+A G DI+ F RV+ + DSKA L+KLLT F F+IITPA L ++D+ SV+++N +G S V WVE +AQG G YK+ AAVSL T + + A ++ N+ LA +G + C Sbjct: 44 SYLCTDAT--GQSAHVCAMVGEGYLYGSGADLISSVRFTDLSATQAMNVNADGMVSAAISTDENLRGFLADYILTAQRSTSRLGNAKRITGNAQVDLYLCGDDDCSTMADLLNVVSADDPGANSTLAFGYSRIA----GAAVR-----------LFGGAKAANWDLSNLLIGNYLTAG-----GQCVTIITFKHRFMADMGWEKASSCENILKKNKTEGNGWYDRVQDFADLIQENGGDRGATLDAGPDLFEYGRTLYCDSKHYENKQTMPAGESTCYAASHRASIAAWEVSEPALEEDPTALHLRLSHGDWWNGYAYLGPDAAKDTGSNPVQRGLRRI----NPLLKLSELSHRADRDDLPWCSTAKEKFDEQHKFGFVQVDGKFVDWRTCDNWGALNWGTVDTPVDDVRAAQPLSEALHVSWANVSYVHTRTYRGPEQVWKSTNDGIGFTSYEYPIPGTLVAGVETVLLDAETVLGRATDAALANSDFTTTIPGALFAMALSVTGLVAAYAGRKDIIYCFYHVGVRAHRVWRWLRLPWRTQYPDSKAREDHRNRMGLLLSKLLTMVTFVFAIITPALLAVVDEFSVRDQNSDGSVSTVVWVEAEAQGQGEYKVVAAVSLFMTSARNDAAFGLLCCNLVLAALGCVATC 667
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.140e-40 Identity = 99/240 (41.25%), Postives = 131/240 (54.58%), Query Frame = 1 Query: 10 QAYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYI-TPASDPNANATLAYGYSRLQETLLGMPVKHITERDAL----------IATL-------------------------------LGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGW 603 QA C D+IT+GQ VGMC+MAGD +L+S+ D+ RF + P A ST+ ++RG LADY L Q T R N K+L G AQ+DLFLCSDP C+V+ADL++I TP D +++ TLA+GY+R+ TL+G+P KHI DAL IA L +G+ NW+ +RIGNY ++ CVTI+ FVHPWMD QGW Sbjct: 1527 QALLCQDAITTGQAVGMCAMAGDKLYLKSAADLLAAVRFVESAPPQIGDT---ATSTEPHMRGFLADYTLSQEQDTKRFNSSKRLKGSAQLDLFLCSDPSCDVVADLVHIDTP--DQDSSYTLAFGYTRIPGTLMGLPGKHIKATDALTSRSIADSGKIAGLADGATVIWTMDDPQWVDATPVMLSYGAAVRFIGMADAKNWNFERLRIGNY-----ETRAGECVTIITFVHPWMDEQGW 1756
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A835ZC60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC60_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.020e-27 Identity = 89/239 (37.24%), Postives = 113/239 (47.28%), Query Frame = 1 Query: 19 FCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASD-PNANATLAYGYSRLQETLLGMPVKHITER--------DALIA---------------------------TLLGLHS--------GHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGW 603 FC D I SGQTV CS+ G+ S+ D+ +RF+ S +A STD GLLADY + + T+ RL+ K +T AQ+DLFLC D C +ADLMYIT A D P+ ATLA+GYSRL TL +P +++ DA A TLL S G NWD+ +R G Y + CVT+L VHPW DA GW Sbjct: 47 FCSDGIQSGQTVHACSLVDAGYVTGSAADLLMASRFKGF------SAGKQAWSTDPNTVGLLADYTMSVHATSQRLDASKDITATAQLDLFLCGDDTCKAMADLMYITAAGDAPSTPATLAFGYSRLANTLAALPTRYLDPATITSTLVPDAAAASPVSVPGAQLSTVAWQIEDPEWVANYPTLLNTASLARALAIGGANWDV--VRAGRYR-----DARGVCVTVLSPVHPWFDAMGW 272
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A835ZIR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR8_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.140e-27 Identity = 150/544 (27.57%), Postives = 221/544 (40.62%), Query Frame = 1 Query: 58 MCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHI---TERDALIATLLGLHSGH---------------------------------NWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLNDNXXXXXXXXXXXXXXXXNAANGFHVYEYGRTLHSGTDGGRERMLEGGDWWNGIDNVANPVFKRFRGYLD------------------TGNPIFKLG-----IGEVIDWRDCDRWGELG--WGP----VDTD----TSASVPAQGMS-EALRISWVNVSYQHPTTQRMDRDYWKTTQTELSSSDFSPTVTGAIVSLAMTAAALIATCVGVGDIVDFFQRVFLLNKYTGPVAEVDSKALAKLLTATVFAFSIITPAALEMIDDISVQNENPNGHGSVVR--WVEGQAQGFGAYKITAAVSLQYTCSYSSVASAIIYINVALAV 1473 MC++ +G S+ D++ +RF D N + A STD G+ AD + T+RL+ K+L+G AQVDLFLC D CN +ADL Y+ ASDP ATLA+GY RL LLG+ +++ R L+ G G N D +R GNY +DS CVT+L HPW D +GW D +A + R L R R G + +A+ R + YLD T + L + + + D +G G WG + TD TS A G S + S + S T + Q +L+++DFS TV GA+++ ++T +LIA +G ++V FF + L G A AK + V F+++T A +I + + NP+G W G A G G YK+ +++ Y YS A A+ +IN+A+AV Sbjct: 1 MCTLV-EGFPEGSAADMWMASRFTDFT--GNGT----AWSTDPNFAGVAADLVMDFAAETARLDARKRLSGTAQVDLFLCGDEPCNTVADLAYVLSASDPEGQATLAFGYQRLPHGLLGVATRYLDPAATRTVLLPATDGDSKGPRSVGRVVEFPEWVDNVPSLLAFGPLARTLVVEGNLDWGRVRAGNY----IDSRGV-CVTVLTPAHPWFDERGWGTAEDCESSQTYIFFTFFAPVRASARN---HPECRQLPP-----RVRRCRSGPPPHVTAALASLPL-RLQAYLDMDHFETADDAGLVLSSTITSSSSLTLWQRYAVLYDAVPLEDVSPYGWRGATWGDQARFMVTDLYCTTSNLFNAVGASANSTGCSPSHHSGIDAITLTAQTALQSSVQGQLATADFSLTVAGALIAFSLTTVSLIAGYLGRRELVRFFAKCRL-----GVTA-------AKAMAVAVTMFALVTYPATIIIAEEGARASNPDGGAGSAGTFWFAGDASGGGYYKVVGVMTVAYASVYSRTAYALAWINLAVAV 511
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836CKV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV3_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.210e-27 Identity = 83/239 (34.73%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 22 CGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMP--------VKHITERDALIATLLGLHSGH-NWDL---------------------------NT----IRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLND 618 CGD+I+SGQ V MC++ G G+ L+S+ RF D A ST+ V+G++AD+ +Q+++ TS + K++ G QVDLFLC+D C+V+ DL Y+ A+ P A ATLA GYSR TL G+ V + D+ ++ +G G W+L NT +R G Y+ D CVTI+ FVH WMDAQGW++ N+ Sbjct: 226 CGDAISSGQLVNMCNLVGRGYPLQSAAGTLMAQRFLDYDADGF------AFSTEPNVQGVVADFTIQISRGTSLADVNKRIAGAGQVDLFLCADTACSVVVDLAYVRAAAAPAATATLAMGYSRFLNTLAGVSTGFLETSAVGAVVPHDSALSPEVGSTVGQVTWELAATANMVDASPILMEFGGLARALSAPNNTAWKGLRAGIYITADGD-----CVTIISFVHSWMDAQGWNRSNN 453
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836CDF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF0_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.730e-27 Identity = 79/236 (33.47%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 22 CGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKH--------ITERDALIATLLG--------------------------------LHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDK 609 CGD+I+SGQ V MC++ G G+ ++S+ + RFR ++ A ST+ V G++AD+ + +++ TS + K++ G QVDLFLCSD C V+ DL YI A P A+ATLA GYSR +L G+ + +R++ +A +G L + N N +R G+Y+ + CVTI+ FVHPWMD QGWD+ Sbjct: 44 CGDAISSGQLVNMCNLVGRGYPMQSAAGLLMAQRFRGFRIDD------LAYSTEPNVPGVVADFTIDISRGTSLADVSKQIAGTGQVDLFLCSDAACTVVVDLAYIASAMTPAADATLAMGYSRFPYSLSGVSTGFLETSAAGAVVDRNSTLAPEVGSVVRQVTWELADNAAVVDASPVLMELGGLARALSAPINTAWNGLRAGHYITS-----DGNCVTIISFVHPWMDEQGWDR 268
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836CAV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV9_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.630e-27 Identity = 80/243 (32.92%), Postives = 112/243 (46.09%), Query Frame = 1 Query: 13 AYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHI-----TER-------------------------------------DALIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLN 615 + FC D+I +GQ G C++ +G+ L + D+ ARF+ A STD V G+LADY+L + ++ +RL+ + L G AQVDLFLCSD DCNVIAD++++ PN TLA GY+R +L+ +P HI T R AL+ L DL +R G Y + + CV ++ F HPWMDA GW N Sbjct: 45 SVFCADAIETGQAAGTCNLVSEGYPLGAGADLLMAARFQSFAAAGG------AASTDHNVGGVLADYELTVARSNARLDAQRSLRGTAQVDLFLCSDGDCNVIADVVHVVTEGKPNG--TLAMGYARFAHSLVALPAYHIRADSVTPRVFPVAESRRGVARSKVAWALADASAEWVSANMVMMPFGALVRFLALSARSAELDLGVLRAGAY----TEQQTGDCVIVISFKHPWMDAMGWGTSN 275
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836CCW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW8_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.680e-24 Identity = 80/238 (33.61%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 22 CGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITPASDPNANATLAYGYSRLQETLLGMPVKHITERDA---------------------------------------LIATLLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGWDKLND 618 C + +G GMC++ G G S+ D+ +RF D N + + STD G++AD L + TSRL+ K+LTG AQVDLF+C D CN +ADL Y+ PAS+P+A TLAYGY RL LLG+P +++ + A L + NW +R GNY VDS CVT+ HPW++A+GW D Sbjct: 68 CVIGVQTGVQSGMCTLIG-GFPQGSAADLLMASRFDDF----NGNGTVW--STDNNFGGVMADMVLDFSAETSRLDARKRLTGTAQVDLFICGDEPCNTVADLAYVLPASEPDAPPTLAYGYQRLPNGLLGVPTRYVVPAETQSVLLPSAAEAGPRAPRTVAWAIESPHWVGNVPSLLSFGAFARTLSIDGNLNW--GRVRAGNY----VDSRGV-CVTLFTPAHPWLNARGWGTTED 291
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A835YRT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT5_9STRA) HSP 1 Score: 105 bits (262), Expect = 4.510e-20 Identity = 88/281 (31.32%), Postives = 117/281 (41.64%), Query Frame = 1 Query: 19 FCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANSSEPIKAPSTDQYVRGLLADYKLQLTQTTSRLNEVKKLTGVAQVDLFLCSDPDCNVIADLMYITP---ASDPNA------------NATLAYGY--------------------------------SRLQETLLGMPV---------------------KHITERDALIAT------------------LLGLHSGHNWDLNTIRIGNYLATAVDSEQPRCVTILMFVHPWMDAQGW 603 FCG ++ SGQ VG C ++G +F S T + ++RFR A A STD+ V G+LAD + + TSR++ K L G AQVD FLCSDP C V+ADLMY+ P A+D NA + T +GY S+LQ+ + +PV T A +AT L G + N D + +RIG Y T D CVTI+ FVH WMD +GW Sbjct: 441 FCGAALISGQAVGACGLSGTRYFGGSGTALLGMSRFRSFAPGA------PALSTDRNVAGVLADVIITNNKKTSRVDLAKALQGTAQVDFFLCSDPTCVVMADLMYVAPTAPATDGNAITIATAYTRFPNSKTGVHGYYIPDSMHGALYDYSKVSFNTTEAATGAARNPYSKLQQVVWSLPVGVAAHPSGTTLDAATAAVEASAKTTAAAAAVATEQWFEAMPTLFEVGGATRLFGSEALANIDWSQLRIGTYELTNGD-----CVTIISFVHEWMDGRGW 710
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Match: A0A836C7Q9_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q9_9STRA) HSP 1 Score: 814 bits (2102), Expect = 6.490e-282 Identity = 827/827 (100.00%), Postives = 827/827 (100.00%), Query Frame = 1 Query: 61 MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG 2541 MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG Sbjct: 1 MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG 827 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337874 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
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BLAST of jgi.p|Trimin1|337874 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3591 ID=mRNA_3591|Name=jgi.p|Trimin1|337874|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1575bp|location=Sequence derived from alignment at Contig_9:922237..928215- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGTCACAGGCCTACTTCTGTGGCGACAGCATCACCTCGGGGCAGACback to top protein sequence of jgi.p|Trimin1|337874 >Trimin1|337874|MIX46637_24_48 ID=Trimin1|337874|MIX46637_24_48|Name=jgi.p|Trimin1|337874|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=511bp MQSQAYFCGDSITSGQTVGMCSMAGDGHFLRSSTDVFTLARFRDVQVPANback to top mRNA from alignment at Contig_9:922237..928215- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3591 ID=mRNA_3591|Name=jgi.p|Trimin1|337874|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5979bp|location=Sequence derived from alignment at Contig_9:922237..928215- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:922237..928215- >mRNA_3591 ID=mRNA_3591|Name=jgi.p|Trimin1|337874|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1533bp|location=Sequence derived from alignment at Contig_9:922237..928215- (Tribonema minus UTEX_B_3156 )back to top |