mRNA_3572 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|337833
Unique NamemRNA_3572
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YKQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ3_9STRA)

HSP 1 Score: 855 bits (2210), Expect = 3.320e-313
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1
Query:    1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL 1266
            MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL
Sbjct:    1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL 422          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YR45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR45_9STRA)

HSP 1 Score: 580 bits (1495), Expect = 2.830e-203
Identity = 318/461 (68.98%), Postives = 347/461 (75.27%), Query Frame = 1
Query:    1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETA-DCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRL--PTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKP--VALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            M  LQQRLTALK A DCH+  S A HANATA SEVFSSTHLLG IMS+AAPG FLFVATVSRRVGAVA+ QVASVHGAG+VC T I AAL SASRLALAL STGF DLVQL   +ET   C C  LG+LES+QAVESMQ+AG+HVCS+VL+GAA KCNIG+L S+                                         AESWPP++FY+LCNAAA+ GHIGTL FLL  GR LFSDQRL  PT DDAS W  +KGA++ T A GTDH L+LVDAA    +  VLRWLHAR PPLQFT ITMT+AA  GGLPTMKWLRA GC HDINEVA+TLL    GAATPPKMEWVRSC GGDWS QGM+DMLV+AL HSSPALA WLRAEGARWP+ LAEVVMTKP  V  RTLLWAVQQGCPF L T+EVC+VLSE  AEAAAVKLALHDLGCPCGCPR
Sbjct:   71 MAMLQQRLTALKAANDCHNFDSLAQHANATATSEVFSSTHLLGTIMSFAAPGAFLFVATVSRRVGAVAM-QVASVHGAGSVCVTGIDAALSSASRLALALVSTGFTDLVQLLSSNETRLPCPCGSLGKLESLQAVESMQLAGMHVCSEVLIGAAIKCNIGHLRSI---------------------------------------SAAESWPPHYFYVLCNAAAMFGHIGTLNFLLEHGRQLFSDQRLRLPTPDDASTWG-YKGAIVFTDAHGTDHALTLVDAAAMADDASVLRWLHARHPPLQFTRITMTLAAGCGGLPTMKWLRAQGCSHDINEVAKTLLQMRQGAATPPKMEWVRSCGGGDWSAQGMTDMLVEALTHSSPALARWLRAEGARWPTDLAEVVMTKPGPVEPRTLLWAVQQGCPFDLWTSEVCEVLSERSAEAAAVKLALHDLGCPCGCPR 490          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CDR0_9STRA (GPS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR0_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 2.060e-159
Identity = 258/467 (55.25%), Postives = 321/467 (68.74%), Query Frame = 1
Query:    1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCS-DVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDD-ASMWANHKGALMCTV-------ADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKP--VALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            M TL +RL ++K A+D  + AS    A+    SEV SST LLG+I+S+  PGDFLF+ATVSRRVGAV IA VASV+GA ++  T++ AAL S SRLALA +   F  +V L    +     CE LGE+   QA+E+++  G++    DVLVGAA KCN+G + SLW GPL KP+L   IC AI  Q +  GDDG VLSW+APQL    +WP Y+ ++LCNAAA+ G + TL+FL   G  LF +QR  +LDD  +  A+    ++          A  T HV++L+DAA    +   L WL +RQP L+FT +TM +AA  GGLPT+KWLRAH CPHDIN +A  LL S    ATPPK+ WVRSC GGDWS QGM+DMLV+ALAHS+PALA WLRAEGARWP+ LAEVV TK   V  R LLWAVQQGCPFG  ++E+C+VLSE  A+AAAVKLALHDLGCPC CPR
Sbjct:  168 MATLDRRLASMKAAIDSREHASQRMRADTDVTSEVLSSTPLLGSILSFTGPGDFLFLATVSRRVGAVGIAHVASVYGADSLLMTELNAALTSTSRLALA-QGDKFTHMVHLCS-QQPMPRACELLGEMGCAQAIEALREGGLYTGGGDVLVGAARKCNVGLVQSLWAGPLNKPELPEPICRAIGLQAAKRGDDGTVLSWLAPQLRAGTAWPAYYHHVLCNAAAMYGRLNTLEFLFAHGLTLFGEQRPVSLDDNVNAGADDDDRIVIAPPSAIYVDASATKHVVTLLDAAAMSDDAAALHWLQSRQP-LEFTGVTMQLAAQWGGLPTLKWLRAHECPHDINAIASILLKSHFVVATPPKLAWVRSCGGGDWSAQGMTDMLVEALAHSTPALAHWLRAEGARWPADLAEVVRTKVEVVRPRNLLWAVQQGCPFGRWSSEICEVLSEHSAQAAAVKLALHDLGCPCTCPR 631          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CE86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE86_9STRA)

HSP 1 Score: 353 bits (907), Expect = 1.160e-115
Identity = 189/353 (53.54%), Postives = 237/353 (67.14%), Query Frame = 1
Query:  286 LALALESTGFADLVQ----LRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDD----ASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGG-LPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAE 1311
            LALAL+S GF++LVQ    ++ G      +   LG+LES+QAVESM  AG  +  DVL GAA  CN G+L SLW G LG+P L  D+C+ I  Q + +GD  +VLSW+APQLP   +WPPY+ ++LCN AA+ G++ TL+FL+ RGR LF DQR  TL D    A  W +  G L+    DG +H+++LVDAA    +  VLRWLH+RQP LQFT ITM VAA  GG LPT+KWL A GCPHDINEV   L+        PP +EWVRSC GGDWS QGM+ MLV+ALAH +P LA WLRAEGA+WP+ L++VV+ K   V  R LLWA+QQGCPFG  T E+   +   L E
Sbjct:    1 LALALDSAGFSELVQSLYAIKGG-----TISSGLGQLESVQAVESMVRAGTRIAIDVLAGAAGTCNAGHLTSLWAGVLGRPPLPDDVCFEIGLQAAQWGDSISVLSWLAPQLP---TWPPYYVHILCNVAAVHGYVDTLEFLMARGRWLFGDQRALTLSDLADLADRWRSDIGTLIHVDTDGDEHIVALVDAAAAFSDATVLRWLHSRQP-LQFTSITMKVAAARGGGLPTLKWLYAQGCPHDINEVCEGLMRCNLSGVAPPMLEWVRSCGGGDWSAQGMTSMLVEALAHMTPTLARWLRAEGAQWPADLSDVVVAKVDSVHPRNLLWAIQQGCPFGRWTFELSTPVERALVE 344          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CKN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN3_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.860e-101
Identity = 188/392 (47.96%), Postives = 234/392 (59.69%), Query Frame = 1
Query:  208 AQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVV-----MTKPVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            A VASV  A +V  TK  AA  S SRL LAL ST F D +           LC  LGEL S++ V+ M  AG++V ++VL+GAA  CNI  LHSLW G L +  +  +IC  I    + FGDDG+ LSW+A QL    +WP +F   +CN AA+  +I TL+FLL RG  LF       L D      +  AL+     GT+HVL++VDAA    N  VL+WLH+ Q   +FT ITM  AA    LP++KWL   GC +DIN++ + +L+S     TPP + WVRS  GGDWS QGM+DML  AL  S+P LA WLR EGA WP  LA++V       KP+   T+LWAVQ GCPFG  TT VC+ L    A   AVK ALHDLGCPC CPR
Sbjct:   87 ACVASVRKATSVHLTKFSAAAVSQSRLNLALLSTKFTDALPTLS-FPARYSLCLALGELGSLEVVQRMAQAGLNVGAEVLIGAADTCNIADLHSLWVGVLSQQDVDLEICIEIGVSLARFGDDGSCLSWLAAQLRRPSAWPAHFINEVCNLAAMWANIPTLQFLLARGPALFGTLGTLFLSDIRSTLPND-ALVFVDLGGTEHVLTVVDAAAMAANPTVLQWLHS-QHAAEFTSITMQEAASNAVLPSLKWLHQQGCAYDINQILQLVLVSV--YVTPPAVAWVRSFGGGDWSPQGMTDMLATALLRSTPGLARWLRVEGAPWPQNLAQLVNRAGNYVKPL---TILWAVQHGCPFGRWTTRVCERLESSSASGGAVKRALHDLGCPCACPR 470          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YMG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG8_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.360e-97
Identity = 198/462 (42.86%), Postives = 255/462 (55.19%), Query Frame = 1
Query:    7 TLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADC-LCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTL-DDASMWA----NHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            TL QRL A+++AV    R        ++AA+EV ++  LL + +S+    ++LF+A                                   SRL LAL S  F  +  L     TA C L   LGE  S++AVE MQ AG+ +  +VL GAA  C+   L S+W GPLG  +L    CY I  + + FGDDG+ LSW+APQLP A++W P +  +L N AA  G   TL+FLL RG+ LF      +L D  + W     +  G       +G   V++L DAA    +  VLRWL +R+  L FT ITM VAA    LP++ WLRA GCPHD+ +V R LL S    ATPP + WVR    GDWS Q M  ML  A+ + +PALA  LRAEGA WP  LAE+V T+   V  +T+LWAVQQGCPFG  TTEVC++L +      AVK ALHDLGCPC CPR
Sbjct:   37 TLDQRLAAVQEAVG-DGRRRQYRRTESSAATEVLTNNELLASTLSFVGACEYLFIAP----------------------------------SRLNLALVSGEFTYV--LSSLRLTARCELSSALGEAGSVEAVERMQQAGLDIEEEVLNGAAKSCDSSSLQSIWAGPLGSQELDAPRCYEIGIRLAIFGDDGSALSWLAPQLPKAQAWSPCYINILSNYAAAWGRTSTLQFLLARGQELFGALGAVSLADHENTWPLTDKDMDGVWTYRDEEGAKQVMTLTDAAAAADDTAVLRWLQSRRA-LAFTGITMQVAAANARLPSLTWLRAQGCPHDMAQVCRQLLGS--RRATPPAVAWVRRYGTGDWSPQCMRGMLASAMLNGTPALARRLRAEGAPWPEDLAELVATEIEDVRPQTILWAVQQGCPFGRWTTEVCELLDDDREGGGAVKRALHDLGCPCACPR 458          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835ZG85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG85_9STRA)

HSP 1 Score: 272 bits (695), Expect = 8.360e-83
Identity = 180/465 (38.71%), Postives = 237/465 (50.97%), Query Frame = 1
Query:    1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDG--AVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLL--LRGRPLFSDQR---LPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVV--MTKPVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            +  L QRL AL+ A+D   R +        A + VF+S  LL +IM++A  G+FLFVA V                                                                 G L  +Q V +   AG  V  ++L+GAA   ++G+LHS+W G L   ++  D    +  Q +  G++G  A L+W+A Q     SWP +F   LCN AA  G I TL+FLL   +G+ LF       L  +   S  +  + AL  T   G  HV+SLVDAA       VL WL + QP   FT ITM  AA  G +P ++WLRAHGCPHDIN +   LL S    ATPP MEWVR+C+GGDWS +G++DMLV AL   +P LA WLR +GA WP  LA +V  +   V +  +LWAV++GCPFG  ++EVC VL+    +A A K ALHDLGCPC CPR
Sbjct:   81 VAALDQRLAALQAALDSRGRPAQRARTGDAAVTLVFASGELLADIMAFAGRGEFLFVAPV-----------------------------------------------------------------GTLALLQRVHA---AGFPVHEELLIGAARTGSVGHLHSVW-GVLTDHEVETDTWCRVGLQLAKRGEEGSSAALAWLAAQRRPPLSWPAHFTNALCNTAARYGCITTLRFLLSPTQGQLLFGPLTALSLAYVKSRSCSSAMRDALRYTDITGKAHVMSLVDAAALGYCASVLAWLRSEQPNFNFTSITMEAAAYWGWMPALEWLRAHGCPHDINTICTALLHSA--IATPPHMEWVRACNGGDWSPRGVADMLVTALMCGTPTLARWLRQQGAPWPKNLAGIVKVLGGSVKVHMVLWAVREGCPFGRWSSEVCAVLTS--PQAMAAKHALHDLGCPCDCPR 472          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YSQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ3_9STRA)

HSP 1 Score: 256 bits (653), Expect = 4.890e-78
Identity = 138/261 (52.87%), Postives = 167/261 (63.98%), Query Frame = 1
Query:  592 WVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            ++AP     ESWP  +   LCNAAA  G   TL FLL RG+ LF      +LDD  +      ALMC   +GT+HV +L DAA    +V VL+WL +R   L+FT +TM +AA    LP MKWL+A GCPHDINEV   +L+  GG  T P ++WV+SC GGDWS QGM+ +L  AL++ +P L  WLRAEGARWP  LAEVV T+   V    +LWAVQQGCPFG  TTEVCD L     + AAVK  LHDLGCPC CPR
Sbjct:   95 FIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEV-RRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHA-LEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVC-IMLMRVGG--TEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPR 350          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YI32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI32_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.760e-66
Identity = 108/163 (66.26%), Postives = 127/163 (77.91%), Query Frame = 1
Query:  805 GTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRT--LLWAVQQGCPFGL*TTEVCD 1287
            G  HV++LVDAA    +  VLRWLHARQP L+FTDITM +AA  GGLPT+KWLR+ GCPHD+N++AR LL S  GAATPPK+ WVRSC G DWS +GM+DMLV ALAH +PALA WLR EGARWP+ L EVV T    ++T  LLWAVQQGCPFG  T+EVC+
Sbjct:    8 GARHVVTLVDAAAAFDDASVLRWLHARQP-LEFTDITMQLAARGGGLPTLKWLRSQGCPHDMNDIARVLLKSRHGAATPPKLAWVRSCGGCDWSARGMTDMLVAALAHGTPALARWLRVEGARWPADLTEVVKTNVKRIKTCNLLWAVQQGCPFGRWTSEVCE 169          
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835Z7G5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.180e-64
Identity = 118/235 (50.21%), Postives = 146/235 (62.13%), Query Frame = 1
Query:  673 GHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGG-LPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVAL--RTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368
            G I TL+FLL  G+ LF       L D      +K   +    DGT H  +L D A    +  VL+WL +R   +QFT  TM VAA  G  L  +KWLRA GCPHDI+++ + +L +      PP M WVRSC GGDWS QGM+DML +AL +++PALA WLRAEGA+WP  LAEVV +K   L    +LWA+QQGCPFG  TT+VC +L +      AVK ALHDLGCPC CPR
Sbjct:    3 GQITTLQFLLEGGQALFGSLGTFCLSDVKDDMQYKACCLFRDVDGTQHARTLSDTATMANDAAVLQWLQSRNA-VQFTSKTMLVAADGGAVLANLKWLRAQGCPHDIDKICQIVLDTPW--TPPPVMAWVRSCGGGDWSPQGMTDMLAKALLNNTPALARWLRAEGAQWPKDLAEVVTSKADILISSNILWALQQGCPFGRWTTQVCGLLEKSHDSGGAVKRALHDLGCPCACPR 234          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKQ3_9STRA3.320e-313100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YR45_9STRA2.830e-20368.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDR0_9STRA2.060e-15955.25GPS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836CE86_9STRA1.160e-11553.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKN3_9STRA1.860e-10147.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMG8_9STRA1.360e-9742.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG85_9STRA8.360e-8338.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSQ3_9STRA4.890e-7852.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YI32_9STRA1.760e-6666.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7G5_9STRA3.180e-6450.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:805232..806600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|337833|MIX46596_6_42
Hectar predicted targeting categoryother localisation
TranscriptId338155
TrackFilteredModels1
ProteinId337833
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337833gene_3572Tribonema minus UTEX_B_3156 geneContig_9 805232..806600 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3572_1exon_3572_1Tribonema minus UTEX_B_3156 exonContig_9 805232..806600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3572CDS_3572Tribonema minus UTEX_B_3156 CDSContig_9 805232..806500 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3572UTR3_3572Tribonema minus UTEX_B_3156 three_prime_UTRContig_9 806501..806600 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337833Trimin1|337833|MIX46596_6_42Tribonema minus UTEX_B_3156 polypeptideContig_9 805232..806500 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1369bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGACGCTACAGCAGCGCCTCACTGCCTTGAAAGATGCAGTCGACTG
CCACGACCGTGCCAGCCCGGCGCCGCACGCAAACGCCACAGCGGCATCGG
AGGTATTCAGCAGCACGCACCTGCTCGGCAACATCATGTCATATGCGGCC
CCGGGCGATTTCCTGTTCGTCGCCACGGTCAGCAGGAGGGTGGGGGCCGT
AGCCATTGCGCAGGTTGCGTCCGTCCATGGAGCTGGCGCGGTGTGCACGA
CGAAAATATATGCTGCGCTGGGGTCCGCCTCAAGGCTGGCGCTCGCGCTC
GAGAGCACCGGGTTCGCCGATCTCGTGCAGCTGCGCGATGGCCATGAAAC
GGCGGATTGCCTCTGCGAACGCCTGGGAGAGCTGGAGTCCATGCAGGCGG
TTGAGAGCATGCAGGTTGCAGGGATACACGTTTGCAGCGATGTGCTCGTA
GGTGCGGCAACCAAGTGCAACATCGGCTACCTGCATTCGCTCTGGTGCGG
TCCTCTCGGCAAGCCTCAGCTGTGCAGGGACATATGCTACGCAATCTGTG
CGCAGACTAGCGGTTTTGGCGACGATGGCGCAGTGCTGTCGTGGGTGGCG
CCTCAGCTCCCCATAGCCGAATCGTGGCCACCATACTTCTTCTACATGCT
CTGCAACGCAGCTGCCTTGAGCGGCCATATTGGCACCCTGAAGTTCCTAC
TCTTGCGCGGCCGGCCGCTGTTCAGCGACCAACGCCTTCCAACCCTCGAT
GATGCGAGCATGTGGGCGAACCACAAGGGAGCGCTCATGTGCACAGTCGC
AGACGGCACCGACCACGTCTTGTCACTGGTCGATGCAGCACTGAGGGACA
AGAACGTCAGGGTGCTCCGCTGGCTGCATGCGCGGCAGCCGCCCCTTCAG
TTCACCGACATCACCATGACGGTGGCGGCCCTGCTTGGGGGGCTGCCCAC
GATGAAGTGGCTGCGTGCACACGGGTGCCCTCACGACATCAACGAGGTGG
CCAGGACCCTGTTGCTGAGCTGCGGAGGAGCAGCAACGCCGCCAAAAATG
GAGTGGGTCAGGAGCTGCAGCGGAGGCGACTGGAGCGTGCAGGGGATGTC
AGACATGCTGGTGCAGGCGTTGGCGCACAGCTCTCCCGCTCTCGCATGCT
GGCTGCGCGCGGAAGGCGCTCGCTGGCCATCGACCTTGGCGGAGGTCGTG
ATGACCAAGCCGGTTGCACTGCGCACCTTGCTCTGGGCGGTGCAGCAGGG
CTGCCCATTTGGCCTGTGAACCACCGAGGTGTGTGACGTGTTGAGCGAGG
GTTTGGCAGAGGCAGCTGCAGTCAAGCTTGCGCTGCATGACCTCGGCTGC
CCCTGCGGCTGTCCGCGCC
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protein sequence of jgi.p|Trimin1|337833

>Trimin1|337833|MIX46596_6_42 ID=Trimin1|337833|MIX46596_6_42|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=423bp
MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAA
PGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALAL
ESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLV
GAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVA
PQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLD
DASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQ
FTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKM
EWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVV
MTKPVALRTLLWAVQQGCPFGL*
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mRNA from alignment at Contig_9:805232..806600+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1369bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )
ATGGTGACGCTACAGCAGCGCCTCACTGCCTTGAAAGATGCAGTCGACTG CCACGACCGTGCCAGCCCGGCGCCGCACGCAAACGCCACAGCGGCATCGG AGGTATTCAGCAGCACGCACCTGCTCGGCAACATCATGTCATATGCGGCC CCGGGCGATTTCCTGTTCGTCGCCACGGTCAGCAGGAGGGTGGGGGCCGT AGCCATTGCGCAGGTTGCGTCCGTCCATGGAGCTGGCGCGGTGTGCACGA CGAAAATATATGCTGCGCTGGGGTCCGCCTCAAGGCTGGCGCTCGCGCTC GAGAGCACCGGGTTCGCCGATCTCGTGCAGCTGCGCGATGGCCATGAAAC GGCGGATTGCCTCTGCGAACGCCTGGGAGAGCTGGAGTCCATGCAGGCGG TTGAGAGCATGCAGGTTGCAGGGATACACGTTTGCAGCGATGTGCTCGTA GGTGCGGCAACCAAGTGCAACATCGGCTACCTGCATTCGCTCTGGTGCGG TCCTCTCGGCAAGCCTCAGCTGTGCAGGGACATATGCTACGCAATCTGTG CGCAGACTAGCGGTTTTGGCGACGATGGCGCAGTGCTGTCGTGGGTGGCG CCTCAGCTCCCCATAGCCGAATCGTGGCCACCATACTTCTTCTACATGCT CTGCAACGCAGCTGCCTTGAGCGGCCATATTGGCACCCTGAAGTTCCTAC TCTTGCGCGGCCGGCCGCTGTTCAGCGACCAACGCCTTCCAACCCTCGAT GATGCGAGCATGTGGGCGAACCACAAGGGAGCGCTCATGTGCACAGTCGC AGACGGCACCGACCACGTCTTGTCACTGGTCGATGCAGCACTGAGGGACA AGAACGTCAGGGTGCTCCGCTGGCTGCATGCGCGGCAGCCGCCCCTTCAG TTCACCGACATCACCATGACGGTGGCGGCCCTGCTTGGGGGGCTGCCCAC GATGAAGTGGCTGCGTGCACACGGGTGCCCTCACGACATCAACGAGGTGG CCAGGACCCTGTTGCTGAGCTGCGGAGGAGCAGCAACGCCGCCAAAAATG GAGTGGGTCAGGAGCTGCAGCGGAGGCGACTGGAGCGTGCAGGGGATGTC AGACATGCTGGTGCAGGCGTTGGCGCACAGCTCTCCCGCTCTCGCATGCT GGCTGCGCGCGGAAGGCGCTCGCTGGCCATCGACCTTGGCGGAGGTCGTG ATGACCAAGCCGGTTGCACTGCGCACCTTGCTCTGGGCGGTGCAGCAGGG CTGCCCATTTGGCCTGTGAACCACCGAGGTGTGTGACGTGTTGAGCGAGG GTTTGGCAGAGGCAGCTGCAGTCAAGCTTGCGCTGCATGACCTCGGCTGC CCCTGCGGCTGTCCGCGCC
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Coding sequence (CDS) from alignment at Contig_9:805232..806600+

>mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1269bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )
ATGGTGACGCTACAGCAGCGCCTCACTGCCTTGAAAGATGCAGTCGACTG
CCACGACCGTGCCAGCCCGGCGCCGCACGCAAACGCCACAGCGGCATCGG
AGGTATTCAGCAGCACGCACCTGCTCGGCAACATCATGTCATATGCGGCC
CCGGGCGATTTCCTGTTCGTCGCCACGGTCAGCAGGAGGGTGGGGGCCGT
AGCCATTGCGCAGGTTGCGTCCGTCCATGGAGCTGGCGCGGTGTGCACGA
CGAAAATATATGCTGCGCTGGGGTCCGCCTCAAGGCTGGCGCTCGCGCTC
GAGAGCACCGGGTTCGCCGATCTCGTGCAGCTGCGCGATGGCCATGAAAC
GGCGGATTGCCTCTGCGAACGCCTGGGAGAGCTGGAGTCCATGCAGGCGG
TTGAGAGCATGCAGGTTGCAGGGATACACGTTTGCAGCGATGTGCTCGTA
GGTGCGGCAACCAAGTGCAACATCGGCTACCTGCATTCGCTCTGGTGCGG
TCCTCTCGGCAAGCCTCAGCTGTGCAGGGACATATGCTACGCAATCTGTG
CGCAGACTAGCGGTTTTGGCGACGATGGCGCAGTGCTGTCGTGGGTGGCG
CCTCAGCTCCCCATAGCCGAATCGTGGCCACCATACTTCTTCTACATGCT
CTGCAACGCAGCTGCCTTGAGCGGCCATATTGGCACCCTGAAGTTCCTAC
TCTTGCGCGGCCGGCCGCTGTTCAGCGACCAACGCCTTCCAACCCTCGAT
GATGCGAGCATGTGGGCGAACCACAAGGGAGCGCTCATGTGCACAGTCGC
AGACGGCACCGACCACGTCTTGTCACTGGTCGATGCAGCACTGAGGGACA
AGAACGTCAGGGTGCTCCGCTGGCTGCATGCGCGGCAGCCGCCCCTTCAG
TTCACCGACATCACCATGACGGTGGCGGCCCTGCTTGGGGGGCTGCCCAC
GATGAAGTGGCTGCGTGCACACGGGTGCCCTCACGACATCAACGAGGTGG
CCAGGACCCTGTTGCTGAGCTGCGGAGGAGCAGCAACGCCGCCAAAAATG
GAGTGGGTCAGGAGCTGCAGCGGAGGCGACTGGAGCGTGCAGGGGATGTC
AGACATGCTGGTGCAGGCGTTGGCGCACAGCTCTCCCGCTCTCGCATGCT
GGCTGCGCGCGGAAGGCGCTCGCTGGCCATCGACCTTGGCGGAGGTCGTG
ATGACCAAGCCGGTTGCACTGCGCACCTTGCTCTGGGCGGTGCAGCAGGG
CTGCCCATTTGGCCTGTGA
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