mRNA_3572 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YKQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ3_9STRA) HSP 1 Score: 855 bits (2210), Expect = 3.320e-313 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1 Query: 1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL 1266 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL Sbjct: 1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRTLLWAVQQGCPFGL 422
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YR45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR45_9STRA) HSP 1 Score: 580 bits (1495), Expect = 2.830e-203 Identity = 318/461 (68.98%), Postives = 347/461 (75.27%), Query Frame = 1 Query: 1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETA-DCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRL--PTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKP--VALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 M LQQRLTALK A DCH+ S A HANATA SEVFSSTHLLG IMS+AAPG FLFVATVSRRVGAVA+ QVASVHGAG+VC T I AAL SASRLALAL STGF DLVQL +ET C C LG+LES+QAVESMQ+AG+HVCS+VL+GAA KCNIG+L S+ AESWPP++FY+LCNAAA+ GHIGTL FLL GR LFSDQRL PT DDAS W +KGA++ T A GTDH L+LVDAA + VLRWLHAR PPLQFT ITMT+AA GGLPTMKWLRA GC HDINEVA+TLL GAATPPKMEWVRSC GGDWS QGM+DMLV+AL HSSPALA WLRAEGARWP+ LAEVVMTKP V RTLLWAVQQGCPF L T+EVC+VLSE AEAAAVKLALHDLGCPCGCPR Sbjct: 71 MAMLQQRLTALKAANDCHNFDSLAQHANATATSEVFSSTHLLGTIMSFAAPGAFLFVATVSRRVGAVAM-QVASVHGAGSVCVTGIDAALSSASRLALALVSTGFTDLVQLLSSNETRLPCPCGSLGKLESLQAVESMQLAGMHVCSEVLIGAAIKCNIGHLRSI---------------------------------------SAAESWPPHYFYVLCNAAAMFGHIGTLNFLLEHGRQLFSDQRLRLPTPDDASTWG-YKGAIVFTDAHGTDHALTLVDAAAMADDASVLRWLHARHPPLQFTRITMTLAAGCGGLPTMKWLRAQGCSHDINEVAKTLLQMRQGAATPPKMEWVRSCGGGDWSAQGMTDMLVEALTHSSPALARWLRAEGARWPTDLAEVVMTKPGPVEPRTLLWAVQQGCPFDLWTSEVCEVLSERSAEAAAVKLALHDLGCPCGCPR 490
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CDR0_9STRA (GPS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR0_9STRA) HSP 1 Score: 474 bits (1219), Expect = 2.060e-159 Identity = 258/467 (55.25%), Postives = 321/467 (68.74%), Query Frame = 1 Query: 1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCS-DVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDD-ASMWANHKGALMCTV-------ADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKP--VALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 M TL +RL ++K A+D + AS A+ SEV SST LLG+I+S+ PGDFLF+ATVSRRVGAV IA VASV+GA ++ T++ AAL S SRLALA + F +V L + CE LGE+ QA+E+++ G++ DVLVGAA KCN+G + SLW GPL KP+L IC AI Q + GDDG VLSW+APQL +WP Y+ ++LCNAAA+ G + TL+FL G LF +QR +LDD + A+ ++ A T HV++L+DAA + L WL +RQP L+FT +TM +AA GGLPT+KWLRAH CPHDIN +A LL S ATPPK+ WVRSC GGDWS QGM+DMLV+ALAHS+PALA WLRAEGARWP+ LAEVV TK V R LLWAVQQGCPFG ++E+C+VLSE A+AAAVKLALHDLGCPC CPR Sbjct: 168 MATLDRRLASMKAAIDSREHASQRMRADTDVTSEVLSSTPLLGSILSFTGPGDFLFLATVSRRVGAVGIAHVASVYGADSLLMTELNAALTSTSRLALA-QGDKFTHMVHLCS-QQPMPRACELLGEMGCAQAIEALREGGLYTGGGDVLVGAARKCNVGLVQSLWAGPLNKPELPEPICRAIGLQAAKRGDDGTVLSWLAPQLRAGTAWPAYYHHVLCNAAAMYGRLNTLEFLFAHGLTLFGEQRPVSLDDNVNAGADDDDRIVIAPPSAIYVDASATKHVVTLLDAAAMSDDAAALHWLQSRQP-LEFTGVTMQLAAQWGGLPTLKWLRAHECPHDINAIASILLKSHFVVATPPKLAWVRSCGGGDWSAQGMTDMLVEALAHSTPALAHWLRAEGARWPADLAEVVRTKVEVVRPRNLLWAVQQGCPFGRWSSEICEVLSEHSAQAAAVKLALHDLGCPCTCPR 631
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CE86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE86_9STRA) HSP 1 Score: 353 bits (907), Expect = 1.160e-115 Identity = 189/353 (53.54%), Postives = 237/353 (67.14%), Query Frame = 1 Query: 286 LALALESTGFADLVQ----LRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDD----ASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGG-LPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAE 1311 LALAL+S GF++LVQ ++ G + LG+LES+QAVESM AG + DVL GAA CN G+L SLW G LG+P L D+C+ I Q + +GD +VLSW+APQLP +WPPY+ ++LCN AA+ G++ TL+FL+ RGR LF DQR TL D A W + G L+ DG +H+++LVDAA + VLRWLH+RQP LQFT ITM VAA GG LPT+KWL A GCPHDINEV L+ PP +EWVRSC GGDWS QGM+ MLV+ALAH +P LA WLRAEGA+WP+ L++VV+ K V R LLWA+QQGCPFG T E+ + L E Sbjct: 1 LALALDSAGFSELVQSLYAIKGG-----TISSGLGQLESVQAVESMVRAGTRIAIDVLAGAAGTCNAGHLTSLWAGVLGRPPLPDDVCFEIGLQAAQWGDSISVLSWLAPQLP---TWPPYYVHILCNVAAVHGYVDTLEFLMARGRWLFGDQRALTLSDLADLADRWRSDIGTLIHVDTDGDEHIVALVDAAAAFSDATVLRWLHSRQP-LQFTSITMKVAAARGGGLPTLKWLYAQGCPHDINEVCEGLMRCNLSGVAPPMLEWVRSCGGGDWSAQGMTSMLVEALAHMTPTLARWLRAEGAQWPADLSDVVVAKVDSVHPRNLLWAIQQGCPFGRWTFELSTPVERALVE 344
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A836CKN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN3_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.860e-101 Identity = 188/392 (47.96%), Postives = 234/392 (59.69%), Query Frame = 1 Query: 208 AQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVV-----MTKPVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 A VASV A +V TK AA S SRL LAL ST F D + LC LGEL S++ V+ M AG++V ++VL+GAA CNI LHSLW G L + + +IC I + FGDDG+ LSW+A QL +WP +F +CN AA+ +I TL+FLL RG LF L D + AL+ GT+HVL++VDAA N VL+WLH+ Q +FT ITM AA LP++KWL GC +DIN++ + +L+S TPP + WVRS GGDWS QGM+DML AL S+P LA WLR EGA WP LA++V KP+ T+LWAVQ GCPFG TT VC+ L A AVK ALHDLGCPC CPR Sbjct: 87 ACVASVRKATSVHLTKFSAAAVSQSRLNLALLSTKFTDALPTLS-FPARYSLCLALGELGSLEVVQRMAQAGLNVGAEVLIGAADTCNIADLHSLWVGVLSQQDVDLEICIEIGVSLARFGDDGSCLSWLAAQLRRPSAWPAHFINEVCNLAAMWANIPTLQFLLARGPALFGTLGTLFLSDIRSTLPND-ALVFVDLGGTEHVLTVVDAAAMAANPTVLQWLHS-QHAAEFTSITMQEAASNAVLPSLKWLHQQGCAYDINQILQLVLVSV--YVTPPAVAWVRSFGGGDWSPQGMTDMLATALLRSTPGLARWLRVEGAPWPQNLAQLVNRAGNYVKPL---TILWAVQHGCPFGRWTTRVCERLESSSASGGAVKRALHDLGCPCACPR 470
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YMG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG8_9STRA) HSP 1 Score: 310 bits (793), Expect = 1.360e-97 Identity = 198/462 (42.86%), Postives = 255/462 (55.19%), Query Frame = 1 Query: 7 TLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADC-LCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDGAVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTL-DDASMWA----NHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 TL QRL A+++AV R ++AA+EV ++ LL + +S+ ++LF+A SRL LAL S F + L TA C L LGE S++AVE MQ AG+ + +VL GAA C+ L S+W GPLG +L CY I + + FGDDG+ LSW+APQLP A++W P + +L N AA G TL+FLL RG+ LF +L D + W + G +G V++L DAA + VLRWL +R+ L FT ITM VAA LP++ WLRA GCPHD+ +V R LL S ATPP + WVR GDWS Q M ML A+ + +PALA LRAEGA WP LAE+V T+ V +T+LWAVQQGCPFG TTEVC++L + AVK ALHDLGCPC CPR Sbjct: 37 TLDQRLAAVQEAVG-DGRRRQYRRTESSAATEVLTNNELLASTLSFVGACEYLFIAP----------------------------------SRLNLALVSGEFTYV--LSSLRLTARCELSSALGEAGSVEAVERMQQAGLDIEEEVLNGAAKSCDSSSLQSIWAGPLGSQELDAPRCYEIGIRLAIFGDDGSALSWLAPQLPKAQAWSPCYINILSNYAAAWGRTSTLQFLLARGQELFGALGAVSLADHENTWPLTDKDMDGVWTYRDEEGAKQVMTLTDAAAAADDTAVLRWLQSRRA-LAFTGITMQVAAANARLPSLTWLRAQGCPHDMAQVCRQLLGS--RRATPPAVAWVRRYGTGDWSPQCMRGMLASAMLNGTPALARRLRAEGAPWPEDLAELVATEIEDVRPQTILWAVQQGCPFGRWTTEVCELLDDDREGGGAVKRALHDLGCPCACPR 458
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835ZG85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG85_9STRA) HSP 1 Score: 272 bits (695), Expect = 8.360e-83 Identity = 180/465 (38.71%), Postives = 237/465 (50.97%), Query Frame = 1 Query: 1 MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAPGDFLFVATVSRRVGAVAIAQVASVHGAGAVCTTKIYAALGSASRLALALESTGFADLVQLRDGHETADCLCERLGELESMQAVESMQVAGIHVCSDVLVGAATKCNIGYLHSLWCGPLGKPQLCRDICYAICAQTSGFGDDG--AVLSWVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLL--LRGRPLFSDQR---LPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVV--MTKPVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 + L QRL AL+ A+D R + A + VF+S LL +IM++A G+FLFVA V G L +Q V + AG V ++L+GAA ++G+LHS+W G L ++ D + Q + G++G A L+W+A Q SWP +F LCN AA G I TL+FLL +G+ LF L + S + + AL T G HV+SLVDAA VL WL + QP FT ITM AA G +P ++WLRAHGCPHDIN + LL S ATPP MEWVR+C+GGDWS +G++DMLV AL +P LA WLR +GA WP LA +V + V + +LWAV++GCPFG ++EVC VL+ +A A K ALHDLGCPC CPR Sbjct: 81 VAALDQRLAALQAALDSRGRPAQRARTGDAAVTLVFASGELLADIMAFAGRGEFLFVAPV-----------------------------------------------------------------GTLALLQRVHA---AGFPVHEELLIGAARTGSVGHLHSVW-GVLTDHEVETDTWCRVGLQLAKRGEEGSSAALAWLAAQRRPPLSWPAHFTNALCNTAARYGCITTLRFLLSPTQGQLLFGPLTALSLAYVKSRSCSSAMRDALRYTDITGKAHVMSLVDAAALGYCASVLAWLRSEQPNFNFTSITMEAAAYWGWMPALEWLRAHGCPHDINTICTALLHSA--IATPPHMEWVRACNGGDWSPRGVADMLVTALMCGTPTLARWLRQQGAPWPKNLAGIVKVLGGSVKVHMVLWAVREGCPFGRWSSEVCAVLTS--PQAMAAKHALHDLGCPCDCPR 472
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YSQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ3_9STRA) HSP 1 Score: 256 bits (653), Expect = 4.890e-78 Identity = 138/261 (52.87%), Postives = 167/261 (63.98%), Query Frame = 1 Query: 592 WVAPQLPIAESWPPYFFYMLCNAAALSGHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTK--PVALRTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 ++AP ESWP + LCNAAA G TL FLL RG+ LF +LDD + ALMC +GT+HV +L DAA +V VL+WL +R L+FT +TM +AA LP MKWL+A GCPHDINEV +L+ GG T P ++WV+SC GGDWS QGM+ +L AL++ +P L WLRAEGARWP LAEVV T+ V +LWAVQQGCPFG TTEVCD L + AAVK LHDLGCPC CPR Sbjct: 95 FIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEV-RRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHA-LEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVC-IMLMRVGG--TEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPR 350
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835YI32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI32_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.760e-66 Identity = 108/163 (66.26%), Postives = 127/163 (77.91%), Query Frame = 1 Query: 805 GTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGGLPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVALRT--LLWAVQQGCPFGL*TTEVCD 1287 G HV++LVDAA + VLRWLHARQP L+FTDITM +AA GGLPT+KWLR+ GCPHD+N++AR LL S GAATPPK+ WVRSC G DWS +GM+DMLV ALAH +PALA WLR EGARWP+ L EVV T ++T LLWAVQQGCPFG T+EVC+ Sbjct: 8 GARHVVTLVDAAAAFDDASVLRWLHARQP-LEFTDITMQLAARGGGLPTLKWLRSQGCPHDMNDIARVLLKSRHGAATPPKLAWVRSCGGCDWSARGMTDMLVAALAHGTPALARWLRVEGARWPADLTEVVKTNVKRIKTCNLLWAVQQGCPFGRWTSEVCE 169
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Match: A0A835Z7G5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G5_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.180e-64 Identity = 118/235 (50.21%), Postives = 146/235 (62.13%), Query Frame = 1 Query: 673 GHIGTLKFLLLRGRPLFSDQRLPTLDDASMWANHKGALMCTVADGTDHVLSLVDAALRDKNVRVLRWLHARQPPLQFTDITMTVAALLGG-LPTMKWLRAHGCPHDINEVARTLLLSCGGAATPPKMEWVRSCSGGDWSVQGMSDMLVQALAHSSPALACWLRAEGARWPSTLAEVVMTKPVAL--RTLLWAVQQGCPFGL*TTEVCDVLSEGLAEAAAVKLALHDLGCPCGCPR 1368 G I TL+FLL G+ LF L D +K + DGT H +L D A + VL+WL +R +QFT TM VAA G L +KWLRA GCPHDI+++ + +L + PP M WVRSC GGDWS QGM+DML +AL +++PALA WLRAEGA+WP LAEVV +K L +LWA+QQGCPFG TT+VC +L + AVK ALHDLGCPC CPR Sbjct: 3 GQITTLQFLLEGGQALFGSLGTFCLSDVKDDMQYKACCLFRDVDGTQHARTLSDTATMANDAAVLQWLQSRNA-VQFTSKTMLVAADGGAVLANLKWLRAQGCPHDIDKICQIVLDTPW--TPPPVMAWVRSCGGGDWSPQGMTDMLAKALLNNTPALARWLRAEGAQWPKDLAEVVTSKADILISSNILWALQQGCPFGRWTTQVCGLLEKSHDSGGAVKRALHDLGCPCACPR 234 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337833 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1369bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGACGCTACAGCAGCGCCTCACTGCCTTGAAAGATGCAGTCGACTGback to top protein sequence of jgi.p|Trimin1|337833 >Trimin1|337833|MIX46596_6_42 ID=Trimin1|337833|MIX46596_6_42|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=423bp MVTLQQRLTALKDAVDCHDRASPAPHANATAASEVFSSTHLLGNIMSYAAback to top mRNA from alignment at Contig_9:805232..806600+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1369bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:805232..806600+ >mRNA_3572 ID=mRNA_3572|Name=jgi.p|Trimin1|337833|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1269bp|location=Sequence derived from alignment at Contig_9:805232..806600+ (Tribonema minus UTEX_B_3156 )back to top |