mRNA_3569 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347215
Unique Name	mRNA_3569
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A835YR36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR36_9STRA)

HSP 1 Score: 560 bits (1444), Expect = 8.500e-196
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 1

Query:    1 MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR 1392
            MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR
Sbjct:    1 MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR 464

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: D7FZ07_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ07_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.170e-26
Identity = 63/104 (60.58%), Postives = 72/104 (69.23%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSG 732
            RGP     + DWTC  CGNVNW  R  CN C   KP  L   DE R+GLGGGFNERQDRAS+ATVEV EDG+DDFGRK  KA+AD++  E AAL RL ++F  G
Sbjct:   75 RGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKP-NLAATDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGG 177

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: G4Z0Q3_PHYSP (RanBP2-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0Q3_PHYSP)

HSP 1 Score: 120 bits (302), Expect = 3.410e-26
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 729
            RGPP      DWTC+ CGNVNW  R ECN+C+++KP  + G DE RDG GGGFNERQ+R + A +EVGEDGYDDFG + KK KA +   E AAL RL+Q++S+
Sbjct:  250 RGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSAKPG-MAGLDEKRDGAGGGFNERQERVASAKMEVGEDGYDDFGMRKKKVKASKAEREAAALARLQQSYSA 351

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A7S2CIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.200e-25
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 1

Query:  451 ADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAF 723
            ADW C  CGNVNW  R  CN+C   KP  L  PD+ R+GLGGGF ERQ++ASL+TVEV EDGYDDFGRKIK    D+   E AAL RL  ++
Sbjct:   36 ADWDCPGCGNVNWARRSTCNMCNTKKP-DLADPDDAREGLGGGFLERQEQASLSTVEVAEDGYDDFGRKIKSKNKDKAAKEAAALARLTASY 126

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A7S2WNS0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNS0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.440e-25
Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFS 726
            RGPP    +ADW C+ CGNVNW  R  CN+C  +KP+T  GPDE RDGLGGGF ERQ+RAS   VEV +DG+DDFGRK K+  +++   E AAL RL  +F+
Sbjct:   31 RGPPGLFVKADWDCNGCGNVNWARRSHCNMCGQAKPST-AGPDEQRDGLGGGFLERQERASSTQVEVADDGFDDFGRKAKQRASNKSAKEAAALARLNASFT 131

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A8K1CMJ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ3_PYTOL)

HSP 1 Score: 113 bits (283), Expect = 3.200e-25
Identity = 59/102 (57.84%), Postives = 70/102 (68.63%), Query Frame = 1

Query:  439 GPP----QADWTC-DCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 729
            GPP      DW C  CGNVNW  R ECN+C+ SKP  + G DE RDG+GGGFNERQ+R + A  EV EDGYDDFG K KK KA +   E AAL RL+Q++S+
Sbjct:   64 GPPGLFKAGDWACLTCGNVNWERRNECNICKGSKPG-MSGLDEKRDGIGGGFNERQERVASAKKEVDEDGYDDFGVKKKKVKASKAEREAAALARLKQSYSA 164

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: F0WQ51_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ51_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.960e-24
Identity = 59/103 (57.28%), Postives = 72/103 (69.90%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 729
            RGPP      DWTC  CGNVNW  RQECN+C+ +KP  + G DE RDG+ GGFNERQ+R + A  E+GEDGYDDFG K KK  A +   E AAL RL+Q++S+
Sbjct:   66 RGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPG-MPGVDERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMKKKKINASKTQREAAALARLQQSYSA 167

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A024GHB5_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHB5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.670e-24
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 729
            RGPP      DWTC  CGNVNW  RQECN+C+ +KP  + G DE RDG+ GGFNERQ+R + A  E+GEDGYDDFG + KK  A +   E+AAL RL+Q++S+
Sbjct:   69 RGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPG-MPGADERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMRKKKLNASKTQREVAALARLQQSYSA 170

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A4D9D5Z5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.680e-24
Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 1

Query:  436 RGPP----QADWTC-DCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLA-TVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAF 723
            +GPP     +DW C  CGNVNW  R+ CN+C   KP TL G  E R+GLGGGF ERQ+R +++  VEVGEDG+DDFGRK  K K DR+  E+AAL RL+  +
Sbjct:   99 KGPPGLFKASDWNCPSCGNVNWERREFCNMCGGKKP-TLAGSGEAREGLGGGFLERQERGAISQAVEVGEDGFDDFGRKKAKEKVDRKAKEMAALARLKATY 199

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BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: H3HB99_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB99_PHYRM)

HSP 1 Score: 105 bits (263), Expect = 4.290e-21
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1

Query:  436 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRK---------------------IKKAKADRRVLELAALNRLEQAFSSG 732
            RGPP      DWTC+ CGNVNW  R ECN+C++SKP  + G DE RDG GGGFNERQ+RA+ A  E+ +DGYDDFG +                     ++K KA +   E AAL RL+Q++  G
Sbjct:  305 RGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPG-MSGLDEKRDGAGGGFNERQERAASAKAEIDDDGYDDFGMRKKVQDLQRTILDKELTELLYLLQKVKASKAEREAAALARLQQSYRCG 428

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347215 vs. uniprot

BLAST of jgi.p|Trimin1|347215 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A835YR36_9STRA	8.500e-196	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FZ07_ECTSI	1.170e-26	60.58	RanBP2-type domain-containing protein n=2 Tax=Ecto...	[more]
G4Z0Q3_PHYSP	3.410e-26	58.25	RanBP2-type domain-containing protein n=1 Tax=Phyt...	[more]
A0A7S2CIC2_9STRA	1.200e-25	59.78	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2WNS0_9STRA	1.440e-25	56.86	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A8K1CMJ3_PYTOL	3.200e-25	57.84	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
F0WQ51_9STRA	2.960e-24	57.28	2-(3-amino-3-carboxypropyl)histidine synthase subu...	[more]
A0A024GHB5_9STRA	3.670e-24	56.31	2-(3-amino-3-carboxypropyl)histidine synthase subu...	[more]
A0A4D9D5Z5_9STRA	7.680e-24	54.90	RanBP2-type domain-containing protein n=1 Tax=Nann...	[more]
H3HB99_PHYRM	4.290e-21	46.40	RanBP2-type domain-containing protein n=1 Tax=Phyt...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:776984..780379 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347215\|estExt_Genemark1.C_Ctg_90072
Description	Zn-finger in Ran binding protein and others
COG category	S
Max annot lvl	4776\|Peronosporales
EggNOG OGs	KOG1995@1\|root,KOG1995@2759\|Eukaryota,3QDM7@4776\|Peronosporales
Evalue	8.05e-28
Seed ortholog	4787.PITG_12192T0
Hectar predicted targeting category	other localisation
TranscriptId	347537
Track	FilteredModels1
ProteinId	347215

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347215	gene_3569	Tribonema minus UTEX_B_3156	gene	Contig_9 776984..780379 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347215	Trimin1\|347215\|estExt_Genemark1.C_Ctg_90072	Tribonema minus UTEX_B_3156	polypeptide	Contig_9 776984..780379 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3569_1	exon_3569_1	Tribonema minus UTEX_B_3156	exon	Contig_9 776984..777660 +
exon_3569_2	exon_3569_2	Tribonema minus UTEX_B_3156	exon	Contig_9 778085..778166 +
exon_3569_3	exon_3569_3	Tribonema minus UTEX_B_3156	exon	Contig_9 778656..778701 +
exon_3569_4	exon_3569_4	Tribonema minus UTEX_B_3156	exon	Contig_9 779290..779389 +
exon_3569_5	exon_3569_5	Tribonema minus UTEX_B_3156	exon	Contig_9 779760..779801 +
exon_3569_6	exon_3569_6	Tribonema minus UTEX_B_3156	exon	Contig_9 779932..780379 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3569	CDS_3569	Tribonema minus UTEX_B_3156	CDS	Contig_9 776984..777660 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_9:776984..780379+
coding sequence from alignment at Contig_9:776984..780379+

spliced messenger RNA

>mRNA_3569 ID=mRNA_3569|Name=jgi.p|Trimin1|347215|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1395bp|location=Sequence derived from alignment at Contig_9:776984..780379+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATACGCTGCAGGAGTATGTGGATCCTGGATCCTCAGATGAGGACCG
CAAGGACAGCAGCAAGCTGGTGAGCTATGAGGACGACGATGACAAGGAGG
ACCAGTACGATCCTGCAGATGCAGCGCCTGCCGACGAGGCACCTCCGGCT
GCTGCTGCTGCTCCTGAGGAGGAAGATCGGGAAATGGCAGGGCTGGTCAT
CCCGCCGCCTCCCCCGCTCCCCGTCGGCAGAGGCAGGGGCAGGGGGCGAG
GCGGCGGCGGCATCGCTCTGGAAGGCATGATAGAGATGGAGAAGGGGCCC
ATGCAGCCGCCATCGGAGCGAGAAACCCTGGATGCACCCTCGTTCCCGAA
CTTCGCCTTCGGCGGCGGCGGCCGGGGCGGGCGCGGCAGAGGAGGAGGCA
GGGGGGGGGGGCGGGGAGGGAGGGGCGGCGGCGGCAGGGGACCGCCGCAG
GCGGACTGGACTTGCGATTGCGGCAATGTCAACTGGGGGTGGCGGCAGGA
GTGCAACCTGTGCCAGGCCTCCAAGCCTGCGACTCTGGTGGGCCCCGATG
AAGTGAGGGACGGTCTGGGGGGGGGGTTCAACGAGCGGCAGGACAGGGCG
TCGCTGGCCACGGTGGAGGTGGGGGAGGACGGCTACGACGACTTCGGGCG
CAAGATTAAGAAGGCCAAGGCGGACAGGCGCGTGCTGGAGCTGGCAGCGC
TCAACCGCCTTGAGCAGGCCTTCAGCAGCGGCGCCATGGCGCAAATACAT
GCAGTCACACAGCCGCAGCGCTTCCCCAGCATCGCCGTGCCTGCACACGC
TGCGCTGCTCACGCCCCCACTGCTGCTGCGCGTCCCCGCGTCCTCGCTGC
CGCCGCGCTGCCGCCTCAGGCACGCCAAGGAGCAGGCCGCGCTCGTGCGC
CTGCAGTGCGCCAAGGAGCAGGCCGCGCTCGCGCGCCTGCATTCCGCGCG
CGCCAAGGAGCAGGCCGCGCTCGCGCGCCTGCAGTCGGCATTCGGCGGCG
GCCTCATGGGCGGCGCCTCCGGTCTCGACCCCGCCGCCAACAGCAGCAGC
AGCGCGGCAGCAGCGCTCGGCCAGTTTGACGACGCCGCGCCCGCAGCAGC
GAGCAACAACGACGAGGATGACCCCCCTTCCAAGCGCCCCAGGGGGAATG
GCGAGCAGGCATCGGGGCGAGACAGGGAGCGAGAGCGCGATTTAGACCGT
TCTCGAGACAGGGAACGGGACAGGGACCGCGATCGGGACCGGTACCGGGA
CAGGGATAGGGACGGGGATAGGAGGAGTGGGGGGGATAGGAGGGGGGATA
GGGATGCGGAGCATAGGGATGGGGGTAGGGGGGGGCGCGACCGGCGCGAG
CGCGAGCGGGAGCGCGACAGGGACAGAGACGCGTACCGTCGCTAA

protein sequence of jgi.p|Trimin1|347215

>Trimin1|347215|estExt_Genemark1.C_Ctg_90072 ID=Trimin1|347215|estExt_Genemark1.C_Ctg_90072|Name=jgi.p|Trimin1|347215|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=465bp
MDTLQEYVDPGSSDEDRKDSSKLVSYEDDDDKEDQYDPADAAPADEAPPA
AAAAPEEEDREMAGLVIPPPPPLPVGRGRGRGRGGGGIALEGMIEMEKGP
MQPPSERETLDAPSFPNFAFGGGGRGGRGRGGGRGGGRGGRGGGGRGPPQ
ADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRA
SLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIH
AVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVR
LQCAKEQAALARLHSARAKEQAALARLQSAFGGGLMGGASGLDPAANSSS
SAAAALGQFDDAAPAAASNNDEDDPPSKRPRGNGEQASGRDRERERDLDR
SRDRERDRDRDRDRYRDRDRDGDRRSGGDRRGDRDAEHRDGGRGGRDRRE
RERERDRDRDAYRR*

mRNA from alignment at Contig_9:776984..780379+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3569 ID=mRNA_3569|Name=jgi.p|Trimin1|347215|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3396bp|location=Sequence derived from alignment at Contig_9:776984..780379+ (Tribonema minus UTEX_B_3156 )
ATGGATACGCTGCAGGAGTATGTGGATCCTGGATCCTCAGATGAGGACCG
CAAGGACAGCAGCAAGCTGGTGAGCTATGAGGACGACGATGACAAGGAGG
ACCAGTACGATCCTGCAGATGCAGCGCCTGCCGACGAGGCACCTCCGGCT
GCTGCTGCTGCTCCTGAGGAGGAAGATCGGGAAATGGCAGGGCTGGTCAT
CCCGCCGCCTCCCCCGCTCCCCGTCGGCAGAGGCAGGGGCAGGGGGCGAG
GCGGCGGCGGCATCGCTCTGGAAGGCATGATAGAGATGGAGAAGGGGCCC
ATGCAGCCGCCATCGGAGCGAGAAACCCTGGATGCACCCTCGTTCCCGAA
CTTCGCCTTCGGCGGCGGCGGCCGGGGCGGGCGCGGCAGAGGAGGAGGCA
GGGGGGGGGGGCGGGGAGGGAGGGGCGGCGGCGGCAGGGGACCGCCGCAG
GCGGACTGGACTTGCGATTGCGGCAATGTCAACTGGGGGTGGCGGCAGGA
GTGCAACCTGTGCCAGGCCTCCAAGCCTGCGACTCTGGTGGGCCCCGATG
AAGTGAGGGACGGTCTGGGGGGGGGGTTCAACGAGCGGCAGGACAGGGCG
TCGCTGGCCACGGTGGAGGTGGGGGAGGACGGCTACGACGACTTCGGGCG
CAAGATTAAGAAGGCCAAGGCGGACAGGTGGGACAGCACTGCGCATACAT
TACGAAATTATGAGGATGAAACGGTTGTCTTGCAGCAATGGCAGCTCGCC
TGAGCAGATAGGATAGTTTGTGTGCGCGGCACATCCGCGAGCGTTGGGTA
CCAAGTATAAGACTCATGCAATCCAACGTACGGTCGAGGCACTCACCTCG
AGGATGCAGGCTGGCAAATTGCAAGTTGGCACACATTTCGCAGCAGCACA
AGATTCACTTTGGCGGCCATGTAGCGCGGCCGCCGACTCCCGCATCTTGT
GCATGCAAACGAAGCAAAGGCTGCTGATTTGACGTGTGCACTTGCACCAT
GTGATGCTAGGTATGTGCAGTTGGCAGGGGAGCTCGCAACTTCAACAGCG
TGAACTTCCGAGGCACGCGCTGCTGGTTGCGCCCGCCTCCTGCGGCGGCA
GGCGCGTGCTGGAGCTGGCAGCGCTCAACCGCCTTGAGCAGGCCTTCAGC
AGCGGCGCCATGGCGCAAATACATGCAGTCACAGTCAAGCTACACACTCC
CCAGAATCACTTGAGGTGTACCATACATTCATGGAATCTTCGCGGCGGCC
ACTACAGCTACACATTACAGCTACATACACATACTGGCATAGCTGAGTGG
CTGATAACAGACGACCGCTAAGACGTCGGCAGCGCTCACACGCCGTCCGT
GCGCCCGTGGCCAACCCCCCCCCTTTCCCCGAGCGACCCTTGCGGCGCCA
CCTCGCGGCCAGCGCGCAACTGCCGTAACTGCCGCTGCGCCTCAGCAGCA
GCAGCGCGTGCGCCCCGCTCCTCCAATCATCATGTACACCTGCGTGCGCC
CTGCCTCTCGCTGGCCGTCTCCCCTCCTCCTCGATCGCCGCGTGTTGCAT
CTCGCCGCCCATCTCGACAGCCGCGTCGCCCCTCGCTGCGGCTTGCCGCT
GCCGCCGCCCTCAATGCGCCGCGCTTGTGCGCGTGTCGTCTGCGTTCGCC
ATTTGCTGCCGCTGCGCCGCAGCAGCCGCAGCGCTTCCCCAGCATCGCCG
TGCCTGCACACGCTGCGCGTGCCCGCCGCCGCCCACGACGCAGAGGCTGC
AAGCAAAACGCCGCGCTTGCGCACATTCCGTCTGCATGCGCTGGCCGCTG
CAGCTGCGCCTCACCAGCAGCAGCAGCAGCGCTCGCCATAGAGGCGTATC
CACATGCACTCTGCAACTTGCCAACCGTCTTCGCATCAACTTCTTCTTTC
GCTGAGCCTTGCTGCTTGTCTCAGAGGGCGGCGCATGCCAGCCCGCGCTG
CTGCACGTGCCCCACTGCAGACACGCCTGGGAGGGGCCCGTGCCATCGCG
CGAGTGCTCGCGCACTCTTGGGCTGCATCCATCGGACTCCATCCATCACC
GCCGTTGCGTCTCGCTATCAGCATGGGCGCCATGACAAACATACATACAC
GCATGCACACATGCGCTGACCCTTGCTGCCACACACGTCCACCGCCACCC
CCAACCGATTCGTGCTGCTGGACGTTGCGGCTGCTCTACACATGCTACAA
CCGCTCTGCTCGTCTCGACTGCATGCACATGCTTGCTGAATCCCCGTGCT
GCTGCAGGCGCGCGGTGCTGAGTTCCGCTGATGCTAAACCTCGCTCCTTG
TCTCAGTGCTCACGCCCCCACTGCTGCTGCGCGTCCCCGCGTCCTCGCTG
CCGCCGCGCTGCCGCCTCAGGCACGCCAAGGAGCAGGCCGCGCTCGTGCG
CCTGCAGTCCGCATCTGACGTTTTTGCTGAACCTTGCTGCTTGTTTTAAG
CAAGTGCGCGTGCGCTAAATTCCCCGCTGCTGCTGCGCGTCCCCACTGAT
GCAGGCGCCCCACGCAGGAGCAGGCTTGCTCGTGCTGCTACTCTACACAT
GCTCAACATAGCTCCTCGTCTCAGCTACATGGCGCGCGCGTGCTGACTCC
CCCCGCTGCTGCTGCGCGTCCCCGCCGTCACACCCACTCTATAGGGTCTG
CTCTAGGTTGCTGCTCTACACATGCTACATAGAGTCCCGCTCCTCGTCTC
CGCAAGCGAGCGCGTGCTGACTCCCCCCCCGCTGCTGCGGCTGCGCGCCC
CCGCCGCCGCCGCGCCGCCGCCGCAGGTGCGCCAAGGAGCAGGCCGCGCT
CGCGCGCCTGCATTCCGCGTTCGGCCTTGCCTCTGCTCTACACATGCCTA
ACCTCGCTCCTTGTCTTGTTTCAGCAAGCGTGCGCGCACCAAACCTCGCT
CCTTGTCTCAGTGCTCACGTGCCCGCCGCCGCCGCGCCGCCGCCGCAGGC
GCGCCAAGGAGCAGGCCGCGCTCGCGCGCCTGCAGTCGGCATTCGGCGGC
GGCCTCATGGGCGGCGCCTCCGGTCTCGACCCCGCCGCCAACAGCAGCAG
CAGCGCGGCAGCAGCGCTCGGCCAGTTTGACGACGCCGCGCCCGCAGCAG
CGAGCAACAACGACGAGGATGACCCCCCTTCCAAGCGCCCCAGGGGGAAT
GGCGAGCAGGCATCGGGGCGAGACAGGGAGCGAGAGCGCGATTTAGACCG
TTCTCGAGACAGGGAACGGGACAGGGACCGCGATCGGGACCGGTACCGGG
ACAGGGATAGGGACGGGGATAGGAGGAGTGGGGGGGATAGGAGGGGGGAT
AGGGATGCGGAGCATAGGGATGGGGGTAGGGGGGGGCGCGACCGGCGCGA
GCGCGAGCGGGAGCGCGACAGGGACAGAGACGCGTACCGTCGCTAA

Coding sequence (CDS) from alignment at Contig_9:776984..780379+

>mRNA_3569 ID=mRNA_3569|Name=jgi.p|Trimin1|347215|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1395bp|location=Sequence derived from alignment at Contig_9:776984..780379+ (Tribonema minus UTEX_B_3156 )
ATGGATACGCTGCAGGAGTATGTGGATCCTGGATCCTCAGATGAGGACCG
CAAGGACAGCAGCAAGCTGGTGAGCTATGAGGACGACGATGACAAGGAGG
ACCAGTACGATCCTGCAGATGCAGCGCCTGCCGACGAGGCACCTCCGGCT
GCTGCTGCTGCTCCTGAGGAGGAAGATCGGGAAATGGCAGGGCTGGTCAT
CCCGCCGCCTCCCCCGCTCCCCGTCGGCAGAGGCAGGGGCAGGGGGCGAG
GCGGCGGCGGCATCGCTCTGGAAGGCATGATAGAGATGGAGAAGGGGCCC
ATGCAGCCGCCATCGGAGCGAGAAACCCTGGATGCACCCTCGTTCCCGAA
CTTCGCCTTCGGCGGCGGCGGCCGGGGCGGGCGCGGCAGAGGAGGAGGCA
GGGGGGGGGGGCGGGGAGGGAGGGGCGGCGGCGGCAGGGGACCGCCGCAG
GCGGACTGGACTTGCGATTGCGGCAATGTCAACTGGGGGTGGCGGCAGGA
GTGCAACCTGTGCCAGGCCTCCAAGCCTGCGACTCTGGTGGGCCCCGATG
AAGTGAGGGACGGTCTGGGGGGGGGGTTCAACGAGCGGCAGGACAGGGCG
TCGCTGGCCACGGTGGAGGTGGGGGAGGACGGCTACGACGACTTCGGGCG
CAAGATTAAGAAGGCCAAGGCGGACAGGCGCGTGCTGGAGCTGGCAGCGC
TCAACCGCCTTGAGCAGGCCTTCAGCAGCGGCGCCATGGCGCAAATACAT
GCAGTCACACAGCCGCAGCGCTTCCCCAGCATCGCCGTGCCTGCACACGC
TGCGCTGCTCACGCCCCCACTGCTGCTGCGCGTCCCCGCGTCCTCGCTGC
CGCCGCGCTGCCGCCTCAGGCACGCCAAGGAGCAGGCCGCGCTCGTGCGC
CTGCAGTGCGCCAAGGAGCAGGCCGCGCTCGCGCGCCTGCATTCCGCGCG
CGCCAAGGAGCAGGCCGCGCTCGCGCGCCTGCAGTCGGCATTCGGCGGCG
GCCTCATGGGCGGCGCCTCCGGTCTCGACCCCGCCGCCAACAGCAGCAGC
AGCGCGGCAGCAGCGCTCGGCCAGTTTGACGACGCCGCGCCCGCAGCAGC
GAGCAACAACGACGAGGATGACCCCCCTTCCAAGCGCCCCAGGGGGAATG
GCGAGCAGGCATCGGGGCGAGACAGGGAGCGAGAGCGCGATTTAGACCGT
TCTCGAGACAGGGAACGGGACAGGGACCGCGATCGGGACCGGTACCGGGA
CAGGGATAGGGACGGGGATAGGAGGAGTGGGGGGGATAGGAGGGGGGATA
GGGATGCGGAGCATAGGGATGGGGGTAGGGGGGGGCGCGACCGGCGCGAG
CGCGAGCGGGAGCGCGACAGGGACAGAGACGCGTACCGTCGCTAA