mRNA_3531 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347192
Unique NamemRNA_3531
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A836C8Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q7_9STRA)

HSP 1 Score: 649 bits (1675), Expect = 1.840e-233
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1 
Query:    1 MKTHVRAVFCSAALLLNRAAHANATGGGSSSNWLFSLPPRDPALYDELGVSPTASKNEIRRDRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALALRPELLLXXXXXLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQGQLNFYAERASTLRNLAAAASTSTGLMLKLKIRGSKNTERQGPTQWLKRGGARGGSAPQTGSATPTAGDAEDVAMIGSALWKVHRP 1008
            MKTHVRAVFCSAALLLNRAAHANATGGGSSSNWLFSLPPRDPALYDELGVSPTASKNEIRRDRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALALRPELLLXXXXXLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQGQLNFYAERASTLRNLAAAASTSTGLMLKLKIRGSKNTERQGPTQWLKRGGARGGSAPQTGSATPTAGDAEDVAMIGSALWKVHRP
Sbjct:    1 MKTHVRAVFCSAALLLNRAAHANATGGGSSSNWLFSLPPRDPALYDELGVSPTASKNEIRRDRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALALRPELLLXXXXXLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQGQLNFYAERASTLRNLAAAASTSTGLMLKLKIRGSKNTERQGPTQWLKRGGARGGSAPQTGSATPTAGDAEDVAMIGSALWKVHRP 336
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A6H5JFE7_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.030e-27
Identity = 105/335 (31.34%), Postives = 150/335 (44.78%), Query Frame = 1 
Query:  112 PPRDPALYDELGVSPTASKNEIRR---------------------DRFKRVAEAYQVLQDDAARAAYHTYG---LEQTSDMDPHDHYRFGPLGPV------------LDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALALRPELLLXXXXXLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQGQLNFYAERASTLRNLAAAASTSTGLMLKLKIRGSKNTERQGPTQWLKRGGARGGSAPQTGSATPTAGDAEDVAM-IGSALWKVHR 1005
            PPRD  LYDEL V   A+  EI++                     DRFKRV+EAYQ+LQDD+ R  YH  G   LE+ S     +  R                   +DP EVFR ++GGG F+ +IG L+P+   +   D  H                         +++ LAE L  +LEV V G+   F +AAWAEAL LR + +      LR  G      Y NY  R+ GKLA   L+  A++G++ FY+++A  + N+ +A S++T L + L+ R                        P+  S   +  D E+ A  +  ALW+VHR
Sbjct:  220 PPRDGVLYDELEVHWGATAREIKKAYYRLAVQHHPDKKPGDTQSEDRFKRVSEAYQILQDDSVREKYHRRGVSALEEDSWEGSQNEQRGXXXXXXXXXXXXXXXXXRVDPMEVFRTFLGGGMFEHLIGPLSPRMVPVRDPDYHH------------------------RKSKSLAEELERRLEVDVQGNSFYFNQAAWAEALQLREQSM--GREILRTVGYV----YKNYAQRSLGKLAPNVLQPQALRGRMRFYSDQAHRVNNMLSAVSSTTRLYVHLQTR-----------------------KPEQPSVDRSNADEEETATRVLEALWRVHR 501
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: D8LDC1_ECTSI (DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC1_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 4.880e-22
Identity = 87/277 (31.41%), Postives = 132/277 (47.65%), Query Frame = 1 
Query:   76 GGGSSSNWLFSLPPRDPALYDELGVSPTASKNEIRR---------------------DRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALALRPELLLXXXXXLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQGQLNFYAERASTLRNLAAAASTSTGLMLKLK 843
            G G++       PPRD  LYDEL V   A+  EI++                     DRFKRV+EAYQ+LQDD+ R       +++ + +             VL   +VFR ++GGG F+ +IG L+P+   +   D  H                         +++ LAE L  +LEV V G+   F +AAWAEAL LR + +      LR  G      Y NY  R+ GKLA   L+  A++G++ FY+++A  + N+ +A S++T L + L+
Sbjct:  157 GKGATPPAYARTPPRDGVLYDELEVHWGATAREIKKAYYRLAVQHHPDKKPGDSQSEDRFKRVSEAYQILQDDSVRVG--CTDVKEAASI------------AVL---KVFRTFLGGGMFEHLIGPLSPRMVPVRDPDYHH------------------------RKSKSLAEELERRLEVDVRGNSFYFNQAAWAEALQLREQSM--GREILRTVGYV----YKNYAQRSLGKLAPNVLQPQALRGRMRFYSDQAHRVNNMLSAVSSTTRLYVHLQ 386
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A151Z3U4_9MYCE (DNAJ heat shock N-terminal domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3U4_9MYCE)

HSP 1 Score: 64.7 bits (156), Expect = 1.260e-7
Identity = 50/172 (29.07%), Postives = 75/172 (43.60%), Query Frame = 1 
Query:  133 YDELGVSPTASKNEIRR---------------------DRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFE 585
            Y+ LGVS TA+ NEI +                     + FK+V+EAYQVL D   R  Y  YG+    +              ++DP E+FR+  GGG FQ   GDL+  +A       + G  +   P+  P      ++ +R  R   LA+ L   +E ++ G+   FE
Sbjct:   77 YELLGVSKTATTNEITKAYYKLAKEYHPDKNRNDAYAEEMFKKVSEAYQVLTDPEKRERYDKYGMNAMDET-------------MIDPVELFRMLFGGGMFQDYFGDLSFYDAFS-----SMGQQEEMDPNKPPQLDMSKMDEKRKERVNYLAKKLEILIEPFIQGNEKEFE 230
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A1D1XJY5_9ARAE (Putative J domain-containing protein C3E7.11c n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XJY5_9ARAE)

HSP 1 Score: 62.0 bits (149), Expect = 9.160e-7
Identity = 50/185 (27.03%), Postives = 80/185 (43.24%), Query Frame = 1 
Query:  115 PRDPALYDELGVSPTASKNEIRRD--------------------RFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLA-----PKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAA 594
            P +  LYD LGVSPTAS +EI++                     +FK++++AYQ+L +   R  Y+ YG  +             P G  ++P + F+   GG +F  IIG+++      +     A +  +GD        + S ++   E  R  R  +L   L+ KL +YV       ER A
Sbjct:   85 PLETELYDTLGVSPTASSSEIKKQYYKLALQFHPDKNKSPDAEQQFKKISDAYQILSNPDLRQKYNEYGGAE-------------PEGGFVNPEDFFKQQFGGDRFVDIIGEISIGRDMKEVLQSAAAEEMNGDLSEEGKVRNKSNNEEEREKIRQQRVEKLVSNLVQKLSMYVDSRDQNDERRA 256
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A835N6M4_9ROSI (J domain-containing protein n=2 Tax=Salix TaxID=40685 RepID=A0A835N6M4_9ROSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-6
Identity = 55/170 (32.35%), Postives = 77/170 (45.29%), Query Frame = 1 
Query:  118 RDPALYDELGVSPTASKNEIRRDRFKRV-AEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKN---ADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWAEALAL 615
            ++   YD LGVSP+AS+ EIR+  + +V  EAYQVL D   R AY   G    S               +LDP  VF L  G   F+  +G L+  +   ++L +E G            +P +    ++A +  R  +LA  L   L  Y  GD  GF R A +EA  L
Sbjct:   47 KETEYYDVLGVSPSASEEEIRKAYYLKVLGEAYQVLSDPVQRDAYDRNGKYCIS------------RETMLDPTAVFALLFGSELFEDYVGHLSVTSMASSELASESG------------NPDKVHEKLKAVQKEREEKLARFLKDFLNQYAQGDRVGFLRRAESEAKRL 192
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A1Y2EQU9_9FUNG (DnaJ-domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2EQU9_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 1.650e-6
Identity = 36/114 (31.58%), Postives = 53/114 (46.49%), Query Frame = 1 
Query:  115 PRDPALYDELGVSPTASKNEIRR---------------------DRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDL 393
            P +   YD LGVSPTA++ EI++                     + FK+++EAYQ+L D   R+ Y+ YG    S+              ++DP E F+   GG +F   IGDL
Sbjct:   65 PCETEYYDILGVSPTATQEEIKKAYRKMALKYHPDKNPDNKEAEEMFKKISEAYQILSDPEKRSKYNKYGKSDNSEN-------------IIDPGEFFKQQFGGDRFNDYIGDL 165
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A397JXU3_9GLOM (J domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JXU3_9GLOM)

HSP 1 Score: 60.8 bits (146), Expect = 2.140e-6
Identity = 53/197 (26.90%), Postives = 84/197 (42.64%), Query Frame = 1 
Query:   67 NATGGGSSSNWLFSLPPRDPALYDELGVSPTASKNEIRRD--------------------RFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAP------------KNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYV 561
            N +G   S     +  P +   Y+ LGVSPTAS NEI++                     RFK++++AYQVL +   R  Y+ +G +  +D++P         G  ++P + F+   GG +F  IIG+++                DL  E+ AH + +           +   E  R  R  +L   L+ KL VYV
Sbjct:   69 NGSGSKKSRRLGTAQEPLETEYYEVLGVSPTASSNEIKKQYYKLALQFHPDKNKAPDAEQRFKKISDAYQVLSNPELRRKYNEFGKK--NDVEPE--------GGFVNPEDFFKQQFGGDRFVDIIGEISIGRDMKEVLQHTIDEEDLTEEEKAHRESNKV-------NQEDERETIRQQRIDKLVANLIQKLSVYV 248
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A0D7A1V6_9AGAR (DnaJ-domain-containing protein n=1 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7A1V6_9AGAR)

HSP 1 Score: 60.1 bits (144), Expect = 4.230e-6
Identity = 69/272 (25.37%), Postives = 110/272 (40.44%), Query Frame = 1 
Query:  115 PRDPALYDELGVSPTASKNEIRR---------------------DRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDVYAPSASPSR------SKGSVEAQ-----------RDARARQLAEALLAKLEVYVGGDVGGFE---RAAWAEALALRPELLLXXXXX---LRAAGPAESEKYTNYGHRTAGKLA-GGPLRAAAIQGQLNFYAERASTLRN 795
            P D   YD LGVS TA+ +EI++                     +RF  +A AYQ L DD  R  Y+ +G + ++           P G  +DP EVF    GG +F  IIG  +  +    A   A  D D++    +  R       K   EA+           R+ R  +L E L+ KL ++     G  +    ++W +   +  + L         L+A G   S K   +   +   +  GG L    +QG+ + ++E  ST+R+
Sbjct:   94 PLDTTFYDILGVSVTATTDEIKKAYRRLAIKHHPDKNPDDPHASERFNEIAIAYQTLSDDTLRRKYNEFGAKAST-----------PEGGFVDPEEVFGAIFGGQRFVSIIGHSSLASDMKTALQDADEDQDIHMVRDAKGRLVLSPEEKARKEAKDKAXXXXXXXXREERVSKLVEELIRKLSIFTESATGPNDPSVSSSWRQICEIERDELKNESYGVELLQAVGFVYSSKAKQFLASSQTFMGVGGWLHN--VQGKYHVFSETVSTVRS 352
[Close]
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Match: A0A2N1NS98_9GLOM (DnaJ-domain-containing protein n=2 Tax=Rhizophagus TaxID=1129544 RepID=A0A2N1NS98_9GLOM)

HSP 1 Score: 59.3 bits (142), Expect = 6.700e-6
Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = 1 
Query:  115 PRDPALYDELGVSPTASKNEIRRD--------------------RFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHYRFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLA-PKNADLPAEDGAHGDWDVYAPSASPSRSKGSVEAQRDARARQ----LAEALLAKLEVYVGGD 570
            P +  LYD LGVSPTAS +EI++                     +FK++++AYQ+L +   R  Y+ +G  +             P G  ++P + FR   GG +F  IIG+++  ++     ++ A  + +         RSK + + +RD   RQ    L   L+ KL VYV  +
Sbjct:   85 PLETELYDILGVSPTASSSEIKKQYYKLALQFHPDKNKSPDAEQQFKKISDAYQILSNPELRQKYNEFGGAE-------------PEGGFVNPEDFFRQQFGGDRFVDIIGEISIGRDMKEVLQNAAAEEMNGDLSEEGKIRSKPNNDEERDEIRRQRVDKLVSNLVQKLSVYVDSN 248
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347192 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Q7_9STRA1.840e-233100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JFE7_9PHAE3.030e-2731.34J domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LDC1_ECTSI4.880e-2231.41DnaJ domain containing protein n=1 Tax=Ectocarpus ... [more]
A0A151Z3U4_9MYCE1.260e-729.07DNAJ heat shock N-terminal domain-containing prote... [more]
A0A1D1XJY5_9ARAE9.160e-727.03Putative J domain-containing protein C3E7.11c n=1 ... [more]
A0A835N6M4_9ROSI1.120e-632.35J domain-containing protein n=2 Tax=Salix TaxID=40... [more]
A0A1Y2EQU9_9FUNG1.650e-631.58DnaJ-domain-containing protein n=1 Tax=Neocallimas... [more]
A0A397JXU3_9GLOM2.140e-626.90J domain-containing protein n=1 Tax=Diversispora e... [more]
A0A0D7A1V6_9AGAR4.230e-625.37DnaJ-domain-containing protein n=1 Tax=Fistulina h... [more]
A0A2N1NS98_9GLOM6.700e-627.68DnaJ-domain-containing protein n=2 Tax=Rhizophagus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:298988..307924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347192|estExt_Genemark1.C_Ctg_90038
GOsGO:0001775,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0019538,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030183,GO:0030433,GO:0030968,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0036503,GO:0042113,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0046649,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051603,GO:0051716,GO:0051787,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:0080134,GO:0080135,GO:0098827,GO:1900101,GO:1900102,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903573,GO:1903894,GO:1903895,GO:1905897
Descriptiontoxin transport
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2214@1|root,KOG0691@2759|Eukaryota
Evalue1.75e-23
Seed ortholog2880.D8LDC1
Hectar predicted targeting categorysignal peptide
TranscriptId347514
TrackFilteredModels1
ProteinId347192
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347192gene_3531Tribonema minus UTEX_B_3156 geneContig_9 298988..307924 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347192Trimin1|347192|estExt_Genemark1.C_Ctg_90038Tribonema minus UTEX_B_3156 polypeptideContig_9 298988..305169 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3531_1exon_3531_1Tribonema minus UTEX_B_3156 exonContig_9 298988..299170 +
exon_3531_2exon_3531_2Tribonema minus UTEX_B_3156 exonContig_9 299839..299947 +
exon_3531_3exon_3531_3Tribonema minus UTEX_B_3156 exonContig_9 300626..300957 +
exon_3531_4exon_3531_4Tribonema minus UTEX_B_3156 exonContig_9 301585..301640 +
exon_3531_5exon_3531_5Tribonema minus UTEX_B_3156 exonContig_9 303817..303990 +
exon_3531_6exon_3531_6Tribonema minus UTEX_B_3156 exonContig_9 304865..305014 +
exon_3531_7exon_3531_7Tribonema minus UTEX_B_3156 exonContig_9 305163..305194 +
exon_3531_8exon_3531_8Tribonema minus UTEX_B_3156 exonContig_9 306351..306450 +
exon_3531_9exon_3531_9Tribonema minus UTEX_B_3156 exonContig_9 307754..307924 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3531CDS_3531Tribonema minus UTEX_B_3156 CDSContig_9 298988..299170 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3531UTR3_3531Tribonema minus UTEX_B_3156 three_prime_UTRContig_9 305170..305194 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3531 ID=mRNA_3531|Name=jgi.p|Trimin1|347192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1307bp|location=Sequence derived from alignment at Contig_9:298988..307924+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGACACATGTGAGAGCTGTCTTCTGCTCCGCTGCGCTGCTGCTGAA
TCGCGCCGCCCACGCCAACGCGACCGGCGGTGGCAGCAGCAGCAACTGGC
TGTTCTCACTGCCTCCGAGGGACCCTGCCCTGTACGATGAGCTGGGAGTA
TCGCCCACTGCTAGCAAGAACGAGATCAGACGGGATCGGTTTAAGCGTGT
GGCAGAGGCGTACCAGGTGCTGCAGGACGATGCCGCGCGGGCCGCATATC
ACACATACGGGCTGGAGCAAACCAGCGATATGGATCCTCATGATCACTAC
AGGTTTGGGCCCCTCGGGCCCGTGTTGGACCCCCACGAGGTGTTCCGACT
CTACGTCGGCGGCGGAAAGTTCCAGCAAATCATCGGCGATCTGGCGCCGA
AAAACGCGGACCTGCCCGCAGAGGACGGCGCGCACGGCGACTGGGACGTC
TATGCCCCTTCGGCGAGCCCTTCACGCTCAAAGGGCAGTGTGGAGGCGCA
GCGCGACGCGCGGGCGCGGCAGTTGGCGGAAGCGCTCCTGGCGAAGCTGG
AGGTGTACGTGGGGGGGGACGTGGGGGGGTTCGAGCGCGCGGCGTGGGCG
GAGGCGCTGGCGCTGCGGCCCGAGCTGCTGCTGCTGCTGCTGCTGCTGCT
GAGGGCTGCTGGCCCTGCTGAATCAGAGAAGTATACAAACTATGGACATA
GGACGGCCGGCAAGCTGGCGGGGGGTCCTCTGCGGGCGGCGGCAATTCAG
GGACAGTTGAACTTCTATGCGGAGCGAGCCAGCACGCTGCGCAATCTGGC
GGCAGCAGCATCGACCAGCACCGGGCTCATGCTGAAGCTCAAAATCAGGG
GCAGCAAGAATACTGAGCGGCAAGGGCCAACGCAATGGCTGAAGAGGGGG
GGCGCCCGCGGGGGCTCTGCCCCCCAAACCGGTTCCGCAACGCCCACAGC
CGGCGATGCAGAGGACGTGGCCATGATTGGCAGTGCCCTGTGGAAGGTCC
ACAGGCCATGATTGGCAGCGCTCTGTGGAAGGTCCACAGATTATCAGTAG
AGGGGCGCGTGCGCCGCGCTTGTAAGCTGGCGCTGCGCGACGAGAGGGTG
CCCCTGGAGGTGCGGAGGCTGCGGGCTGAAGCACTGGTACGACTCGGGGA
GATCTACAGCAGCTGCGCCAGGGGTGGCCAGCCAGTACATACACATCCAC
CTGCCACAGACTTTCCATTTACATATGCAGACCCAATCGATGGCGCGCAT
GGGCCACAGCCGCCAGCAGATTGGTCAGAACCACAATGACACATCGTTGC
GAATGAT
back to top

protein sequence of jgi.p|Trimin1|347192

>Trimin1|347192|estExt_Genemark1.C_Ctg_90038 ID=Trimin1|347192|estExt_Genemark1.C_Ctg_90038|Name=jgi.p|Trimin1|347192|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
MKTHVRAVFCSAALLLNRAAHANATGGGSSSNWLFSLPPRDPALYDELGV
SPTASKNEIRRDRFKRVAEAYQVLQDDAARAAYHTYGLEQTSDMDPHDHY
RFGPLGPVLDPHEVFRLYVGGGKFQQIIGDLAPKNADLPAEDGAHGDWDV
YAPSASPSRSKGSVEAQRDARARQLAEALLAKLEVYVGGDVGGFERAAWA
EALALRPELLLLLLLLLRAAGPAESEKYTNYGHRTAGKLAGGPLRAAAIQ
GQLNFYAERASTLRNLAAAASTSTGLMLKLKIRGSKNTERQGPTQWLKRG
GARGGSAPQTGSATPTAGDAEDVAMIGSALWKVHRP*
back to top

mRNA from alignment at Contig_9:298988..307924+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3531 ID=mRNA_3531|Name=jgi.p|Trimin1|347192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8937bp|location=Sequence derived from alignment at Contig_9:298988..307924+ (Tribonema minus UTEX_B_3156 )
ATGAAGACACATGTGAGAGCTGTCTTCTGCTCCGCTGCGCTGCTGCTGAA
TCGCGCCGCCCACGCCAACGCGACCGGCGGTGGCAGCAGCAGCAACTGGC
TGTTCTCACTGCCTCCGAGGGACCCTGCCCTGTACGATGAGCTGGGAGTA
TCGCCCACTGCTAGCAAGAACGAGATCAGACGGGTGCGTGACTGGTGGCT
TTATGATCTGATTGTTCGTCACCAGCGAGGTGCCTTCTGTCTTATGGCAC
TATGCTCGCTCGCAACTGGGTTCCTGAAAGTGCCAGTTGGGATGTCTCGC
TGACACTGTGTTGGCCCTGATGCTGACTGATGTTAATTTCTGCTGCAGGC
TTACTTGAAACTAGCGGTCTCATGTCATCCCGACAAGGCGGGCGCAGACG
AGGTAAGCCAAAATGAGCATTGTCGCAACACGCTCCACGTGGCCGAAATG
TCGGATGAAGTGGCTTGTGGAGTATTTCCTGCAATTCTGCTTCACTGCAG
ATTGTACGCTTCAATGAGATGTCTTCTGCTCACATTTTTGTTGCTGACGG
TAGAGGACCATTGAAGTTTAGCTGCGTCACCGGTCGACCGCACGCTGCTC
TCTTTCCCAGCTCATTACTTACTTCATTCCATGATCTTTGCATGTATGAT
TTCAAAGGCGTCGGAGCAATCACGCAATGAAATTAGGCCTTTCTGACAAA
CCTGACACTGAGTGTGCCTTGACTGCTGAGCCATTCCAAAACTCCAATCC
TGTGACTGTCGCCAAACTGAATGAGCTTTGAATGCCAAATCAGTAGTCGG
CACCACACTGACCTTCACTATGTCTCCATCGCTCACGCCATTGACCTACA
GGATCGGTTTAAGCGTGTGGCAGAGGCGTACCAGGTGCTGCAGGACGATG
CCGCGCGGGCCGCATATCACACATACGGGCTGGAGCAAACCAGCGATATG
GATCCTCATGGTGAGACAATCCAACCATTTTCATGAAATCTTGCAGGCAC
AGCTGTGCCCAGAGCTAGGGACTCTAGCAGGACTAGGGAACGCCGTTTTC
TTGCGGGCACGAACTCGTTCACACACGGAATCAACGCTTATGTCAGTTGT
CGATTGCTGGCTGCCATCAGGCGTCGACGCAAACTTAGCATCCTTGATGA
GGTGCTTGCTGTCAGTTGTCAGACGGAGGACTGTTTTGCACGTAATGTGA
AGCATATGCCAATGGAATGCCGGCGTGAGCCACTGATGCCAAGGCAGGGA
GCGCGTTGTGGCAGTCATGCTGCTGCATTGGTCATGGCGATTTGCATGAA
TTCAGCTTCCGGTCAGGGTGCGGGTTAGAGTTGTGCAGCCACAGGGCTGC
TCATGAGCAGAACTTTGTGTCCTAAGTTGCTGGGCCTTTGATAGTGGGTT
CTGTAGGACGCATCGCATTTTGCGAAGCAGTGTTGTTGTGAGTCTGCGCA
CATGGCTCAGCTTGCGCGCCAGTTCAAGGAGCTGGACTTGCGGCGCGTGC
GCTGCATTGATATAATGAGCATTGAATCACAGCGAACCCGTGGTTCTTCA
GATAACTGTTGCCGTTCCGGGGAGGTGCTGATCTGCCACTGTTCCTATAC
CCTCACCCCTACCCCCCCCCCCCCCCCCCCCCCGGCAGATCACTACAGGT
TTGGGCCCCTCGGGCCCGTGTTGGACCCCCACGAGGTGTTCCGACTCTAC
GTCGGCGGCGGAAAGTTCCAGCAAATCATCGGCGATCTGGCGCCGAAAAA
CGCGGACCTGCCCGCAGAGGACGGCGCGCACGGCGACTGGGACGTCTATG
CCCCTTCGGCGAGCCCTTCACGCTCAAAGGGCAGTGTGGAGGCGCAGCGC
GACGCGCGGGCGCGGCAGTTGGCGGAAGCGCTCCTGGCGAAGCTGGAGGT
GTACGTGGGGGGGGACGTGGGGGGGTTCGAGCGCGCGGCGTGGGCGGAGG
CGCTGGCGCTGCGGCCCGAGGTGCGTCATCCGTTGAAGTTGCATTTGTAC
TTCTACTCTCTCGCCATTTGTGCGTCATGAGCTTTGTGGACCCATGGGGC
GCGAATGAGCGCGCGGTGTGGGCGGCCCGAGGTCCGTTGTCCGTTGAAGT
TGCACTTGAAGTTTTACACTTTAGTCATGTTCGCGCCGTGAGGTCTGTAG
GCGCACTAAGAGCACATGAGCTTGCAGCATGGGCAGAGCTGCTGGCGTTG
CGGCCCAATGTGCGTTGCCGTTGAAGTTGGCCTTGAACTTGTATATTGGT
CGCATCATGCGCTTTGTAGGCCTATGAGGCTCTCTTTGGAGGTAAATGTC
CAACAGTACTCTCAGGCGTACTCAACTCATGAGGGAGGAAAATGTTGCAC
CAGGTTCTAAAAGGCAATGCAGTTGCGCAGAATAGCGCTACAGTAGGGAC
TCTGGCAGCAGCACCTTTTTGGATTGTAGCAGTGGCAACAACAACAGCAG
TACGACAGCAGCAGTGTGGACCAGCACTTCTTGGCAGCAGCAGCAGCAGC
ATCAGAGCCTGCAGCAGTGTGACCACAGTGCTCAGCCACTGGTGTGACCA
CAGTGCTCAGCCGCTGCCATACAGCAGCTGCCACTGCTGTGCGGCAGCTG
CTGCTGCTGCTGCTGCTGCTGCTGAGGGCTGCTGGCCCTGCTGAATCAGA
GAAGTGAGAAATGCGCAATGAACATCTGAAGTAGTACGCGAGGCTTGGCT
TCGCATCGCTCCTAAGCAGTGTCCGGATGGCGATCTGTATGTAAGGGGAT
AGCGGTGTGAACTGGAATCAGGTGTCCCAAGCACAATACATTCGTATGGA
TGCGTGTATACTGACGTGTCCAATGAGTTAATCCTTAATTCTTGCCGTTC
CATGCGCGCGGAAATGCAAATCACACATTGGGTTTGGTCGCGACTGGCTT
ACACTAGTGTGAACATCGTCTGGGTTGAAGTACATTCTGTTAAGGTCTTT
CAAGTACGCTATGAGCTGGGTCAGAAACGAATGTGTCCTTTGCATAGTAT
GCACGCAAAGTTACAAGTGCCAATGTTGCCCAATATCTTCATGCTGAGAT
TGGGGAAGATTTAAAAAGCAAACCTGGCGTTCAGCAAGCTGTAATGCCGC
CCTTTAAAGGAGCAGCAACTGAGCTCATACATTATAAATATGAGAAACCA
TACAATCGAATATGATATGCTCTTTCACTTGCCTCTGTAATATGTAATAA
TACGTATGGCAGCATGCCTCTCAGAATACGAACAGCACTCCGCTGCTCAG
TACCCACCTACCATCCCCAGCAATTTGAATGTTTGTATGGCCTCATTGAA
GTATGCAGCCTTGACGTACAGCGCTGAGCATTGCTGGAGGTCACGCTTGA
ATGAAGGCCACTTATCAGCGTTACCAATGCCCGCCATTGTGGCGGATGTC
ATTGTTGCACAGCTTTATTCTGAGCAGTGTCGTCTGCTGCAGTGAACTCG
CTGCAGGCCTTTGAGCACTGACATGCATCACTCTATCAGCAAGGTAATGC
GTGCTGTGTCTGTCATCAGAAGAGGGGATTTCTGTTTTTCCTTCATGGGC
TTCTGTATGTACTTCTATGCAAGAACAGCACTTCACCATCAGCACTTCAT
CAATACCTGCAACCCTGAGAAATGTCTTGTCTCATGTCCATCATTCCTGT
GTGTTGCCCGCTGCGGCCGCTTCTTCTCTCAACCATCTTCAACAATGGTG
CAGTCACTGGGTCCCGAGATCCTGAGCTCGGTGGGCTACGTGTGAGTGAT
GCTACCAATACCTACCTACCGGTAGTGCTGATGCATGCACGCATTGCGCT
TTGATGGCTGATAAGATAAATCAAAAGACTTGTATACAGTGGTTGCGCTA
GTAGCATGGGGTTTTGTAATAGGGGTAGGGTCATAGCCTGCAGTCCGGAT
CTTGCGCTCTAGCAGCATGCACAGTCGTCGTTCGTTTTATGTGCCGTCAG
TGCTGATGTGGTCATAGCCATATATTAAGGGTTAGGGTTAGGTTATGGCC
ACATATTGATCACTGATTCATGCGTTATCATAAGCACCCATTGCTGGCGC
ATCATACTTTCAAGAAGCTTTTGATATAGAAGACGCCTCATTACAGACGA
GCACCGGCTGCTGAGCGGTTTTGCGATGGGCTTTGCAGATTGTTGAAATA
TAATGCACTTAGTTGTGGCATTTACGTCATGCACTTTATCAAGTTTCCTG
TACCTGCACTTTCATTTGCTGCATGTCATGATGCTGACATTGTGACGTCT
GGCTCCGTGTGCTGCGTTGCGCACTTGAAGTTGTTGCAGGCTACTGCTTG
AAGTTGCAGTGTATACTTCATCATGGATACATACACACACACTACATCAT
CGCCACTTGAGCAGCAGATGCGCCCGGTGCGCCCGGTGATGAAACATGAG
TAGGCCGTACGTACCTACCCTGGTAGCAACGCTCATCACTGCAGACGGCA
CTGTCGTTGTCGTCGACGCGCACAAGCGCACAACTCACTCGGACGCGGCA
ACAAACAGCCCATGTTTCTCAGGTATACAAAAGCGCAACGCTCAGCACTG
CGGACGGCGTCATTTGGCGCATGTTGTGTACAGCAACACAATGTCATGTA
AATAAAACAGCTTTTATTGGGGGTGCGGCCACTGCGCAAACATCGTTTCT
TTTTTTAGGTTCAATCAAACAAAAAACGGTTACTTGCTAGACAAAGATAA
TATTATAACAGATGGTTATCCCGTTTTTGACACTGATGTGTAGAGTCTTT
ACTCACAAGTACATCTATATTAGTGTAAATAATGGGACTCACACACCGCA
TCATACATACCGTATGCTGTGTTCTCCAGGTATACAAACTATGGACATAG
GACGGCCGGCAAGCTGGCGGGGGGTCCTCTGCGGGCGGCGGCAATTCAGG
GACAGTTGAACTTCTATGCGGAGCGAGCCAGCACGCTGCGCAATCTGGCG
GCAGCAGCATCGACCAGCACCGGGCTCATGCTGAAGCTCAAAATCAGGGG
CAGGTGCGCAACTTCAACTTGAGCACTAGGTGCACGTGCGCCATGTGGTA
GACGCGCTGTGTGTGGCATTCACGCCGTTGTGAGAGTTTGGGTGTGAGGT
CGCTGATAACCTAGGGTTAGGGTTATGGTAGTGCCCAATGTCAGGGACAC
GTGCACGTTCATAACACTGGTGATACTGCTGGTCGTGCGCTCTGTAGGTG
GTGGCAACCTTATGCTGTTGTTCTGTTGCTGGCCACTGACCTCATGTTGA
CTCGGAAAAAAGGGGGGACAGGTACGCGCCTTCAAATACCGCTACATGTA
CAGTTTTGTCTAAACACAGGATGTGCTTTGCATTGCGTTCATGCGCTGTT
GCATTATGACTGTCGCTGACACGACAGCCGCTTAATGGCCAGCAAGCGCT
GGTGCCCATATACCTTGAAGTAATTGCATGCATACGCATACGCACGCATG
GCATTTACATGGTATGGAAACGAATCCAACGATTGTAGAGCTTCAGGCGA
CAAGGTGTGCTTGGCCGTCAAATTGAATGCCTTCCACTGGTAATCGTGGT
CGCCGCTGCCGCGGCAATTGTATATTTTGTTATGTAGACTCATGTGGCCA
TGGGTTTCATCATTGTGTCAAGGCCACCGAGGCGCAGCTGCACTGATGTT
TTCCATACGACTCTCCACAGTCAGATGCGACACAAACATCTCCAGCAAGT
CTCATCGAGCTCATCATTGGAGCAAGCTGTTGTTTAGAGGTTGATTTCTG
AGTCAAAATAGCATTGTCCATGAATCCACGGCCACAAGAATGCGCGCTTC
ATTCAGCACGTGTTTGCTGTAACTGCACATCAGGCGATCATGATTACACA
ACTCTATTGCCTTGTCTCAACGCGCAGCAAGAATACTGAGCGGCAAGGGC
CAACGCAATGGCTGAAGAGGGGGGGCGCCCGCGGGGGCTCTGCCCCCCAA
ACCGGTTCCGCAACGCCCACAGCCGGCGATGCAGAGGACGTGGCCATGAT
TGGCAGTGCCCTGTGGAAGGTCCACAGGTCAGCTCGTATGCATTGCAACA
ATAGCATTGGCATGTTTCAGTGCTGTGCTTAACGGTGGTCAGAAGTAGGG
TTGGGGTTAGGGTTAGGGCTAGCTGACCCCCAGACCGGTTTCGCGAAGCC
CACCGCCGGCGATGCAGAGGACGTCGCCATGATTGGCAGCGCTCTGTGGA
AGGTCCACGGGTCAGTTTGCATGCATGTTGGCTAGGTCAAAGCGTATTTT
TGAAGTTTATTTCTGAGTCCCCCGTTTGTGGTGGACTGCATGCTCGGAAT
CGAGCACACTCACCACATGCGCCACAAATACGCCCTTTACGCAGCATGGT
ATATGTTGAGGTTTGCTCAAGACGTATTCTTGATTGCTAGATACGTCCCA
AATACGCCATATGTGTGTGGCCAAGTACGTTTTCGTGCAAACCTGATGTT
GACAGATGCACAGTAGTGGCATGCTGCTGAGATGGAGGTACTGCGTTCTG
AAGTGCACAGGGCTGTCGCTACACAATCCCGAGGTGCTCAATACAGATGA
CCACATGTTGTCTTCAGGGAGCCTCCGCAACTTTGGCACGTTCCCTCGAC
TCTTGCGAGTACCCCTGTTTCAATTTCAACTTGTGTAGCAGTGCTCGTCG
GTCCCATGCGAATCACCTCTCAGACAGCCTGCATTCACGCGTTGGGTGTA
GCAGCACACATACCAGCCGTTGCTGGCATGCCAGCTGCAAGTCCAGTTAT
GATTGTCAACTCAACGTCAACAATCCTAACTGCAAGCGCCGTCACCACCT
TACTACGCCTGCCATTTGCGCCACACCGCGAACCTGCGTGTCCTCTGCGC
ATACTCGAATTTCCTCAATCTTTGAAGTAAATTGCTCACTTGCGGGTCAA
CCCAGGGCCACCTCGCGCACTTCATAGCATTTCATGTCAGCGTGGGTCGC
AGCTGCCTGATTAACAAAAGTCTTTTTGGCTAAAGTGGATATGGTGGTAC
TGTTTGACTCGTGGCCAATTGCTGCAGCAGCGGCGACCACGGTTCTTGAT
GGAAGGCACTTGCGGCTCACCATCCCTTGTCACTTAGAGAGCTCTACAAT
CTTTTGATTCGTTCTCATTAACCTGAACTTACTGATCCGCGTTGACTGCA
ACATGGGCTGCAACGCCATGACATGCTGCAGATTATCAGTACAGGGGCGC
TCAAGCCTCTCGCATACAAAAGTTAAAGTGTGTTTTCAGGCGCGATGCAC
GTGCCGGGGCGCCACCTCGCATACTTCTTCAAGTGTTGCTCTTCAGCGCG
CAACTCAACTTCAACAACCTCAACACACACACCGTGTCATCTCAACCATG
CCATGACGCACTGCAGATTATCAGTAGAGGGGCGCGTGCGCCGCGCTTGT
AAGCTGGCGCTGCGCGACGAGAGGGTGCCCCTGGAGGTGCGGAGGCTGCG
GGCTGAAGCACTGGTGAGCACTGCTGCTGTTTGTTGGGCGCTGCTGTGTG
CTGGATCTGACCTCAATGCAAAGTTGTCTTGTGCATGTGCACTTGAAAAC
AGATACACCATTGATATGAACAGCACACAACCCTGGTAGAGGTGCGGAGG
CTGCGGGCAGAAGCACAGGTGAGCGCTGCTGCTGTTTGGCGGGCGATGCT
GCCGTCTGCTAACTTCAACACAGAAATTCACTGCACACGTGCAATCTCAA
ACGGCGCAGACAGTGTAACGTGCGCAGCCACTGCAACATCAACAACACCC
ACCCTGATGGAGGTGCGGACGCTTCGTGCAGCGCTGCTGGTGCGGGGCAC
TAATACCAGCACCTGCCGTCCTGTCAGCGCATACGTCATCCTGGCCCAAC
AGTGGACAAGGCTTTGGGCTACTTTAGCTTGACCAGTGCATGTGCACAGT
ACTGCGCATAATTTATTAAAATATAAACTGGAGGTAGTCGTAACCCCACA
TTCAGGACGCGTGAATCCGAACAATCACTGTGGGGACACACCACACATCA
ATATTCACCATGTTGCCCTGCACCCATGAGTGTGTATCAGAGTGTTTACT
GAGGGGTAGGTACGGGTATGCAACCTGACCTGCAAGACAGCAGCACTCTT
TTCTTCATCCCGGTTATTCTGTTTCCAACACAAGCAATGGGGTCGTTGTG
GGCACATGTCAGTGCAGCATGGCTCAACTGCAAAGCTAGCTACTGAATCA
AGGCATTGTGTTGCTGGTAGTTTGGCCATGTCAAGTGTCATGTCAGAGTA
GCTGCGCAGTGCGGCAAAGTGGCATTAGGGTCAGGGACAGGGTTAGGGTT
CGTGCTCACTAGATCATCAATTCTCACTGCCAAAGGTAGACGTGCAGGTG
GCCTGCAGCAGCAGAAGAGCGTCGCCGATCGCATGCAGTGTGAGCGCTGC
ATTGTTGAGCACTCGCAACGTGTCTTTCAGATATGCTCATGCAATATGTA
CATGTTCCGTTTCTTGATGCACGACCACCTTCTCTCATGCATGCACAGCT
GCACGCTAGGAACGCAATACTTGTACTTTTTATCAATTCTCGCTCAGGGC
GCGAAAAAGCCCAGATGATTGGCATCTAGCTGTAAGGAATCTACATGTCG
TATGACAGTACATCAACTCCGGTGGGCACGATAACACAGAATTATTGCAC
TTATGTGTCTAGTCGCCCCATTGCTGCAAATGTATATGGCACTTCATGCA
TTTGAATGGCGTGCTAAGCCCTTCTACAGCCAACCTGACTCTGCAATATC
GTCGCTTTGCGTGCAGGTACGACTCGGGGAGATCTACAGCAGCTGCGCCA
GGGGTGGCCAGCCAGTACATACACATCCACCTGCCACAGACTTTCCATTT
ACATATGCAGACCCAATCGATGGCGCGCATGGGCCACAGCCGCCAGCAGA
TTGGTCAGAACCACAATGACACATCGTTGCGAATGAT
back to top

Coding sequence (CDS) from alignment at Contig_9:298988..307924+

>mRNA_3531 ID=mRNA_3531|Name=jgi.p|Trimin1|347192|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1011bp|location=Sequence derived from alignment at Contig_9:298988..307924+ (Tribonema minus UTEX_B_3156 )
ATGAAGACACATGTGAGAGCTGTCTTCTGCTCCGCTGCGCTGCTGCTGAA
TCGCGCCGCCCACGCCAACGCGACCGGCGGTGGCAGCAGCAGCAACTGGC
TGTTCTCACTGCCTCCGAGGGACCCTGCCCTGTACGATGAGCTGGGAGTA
TCGCCCACTGCTAGCAAGAACGAGATCAGACGGGATCGGTTTAAGCGTGT
GGCAGAGGCGTACCAGGTGCTGCAGGACGATGCCGCGCGGGCCGCATATC
ACACATACGGGCTGGAGCAAACCAGCGATATGGATCCTCATGATCACTAC
AGGTTTGGGCCCCTCGGGCCCGTGTTGGACCCCCACGAGGTGTTCCGACT
CTACGTCGGCGGCGGAAAGTTCCAGCAAATCATCGGCGATCTGGCGCCGA
AAAACGCGGACCTGCCCGCAGAGGACGGCGCGCACGGCGACTGGGACGTC
TATGCCCCTTCGGCGAGCCCTTCACGCTCAAAGGGCAGTGTGGAGGCGCA
GCGCGACGCGCGGGCGCGGCAGTTGGCGGAAGCGCTCCTGGCGAAGCTGG
AGGTGTACGTGGGGGGGGACGTGGGGGGGTTCGAGCGCGCGGCGTGGGCG
GAGGCGCTGGCGCTGCGGCCCGAGCTGCTGCTGCTGCTGCTGCTGCTGCT
GAGGGCTGCTGGCCCTGCTGAATCAGAGAAGTATACAAACTATGGACATA
GGACGGCCGGCAAGCTGGCGGGGGGTCCTCTGCGGGCGGCGGCAATTCAG
GGACAGTTGAACTTCTATGCGGAGCGAGCCAGCACGCTGCGCAATCTGGC
GGCAGCAGCATCGACCAGCACCGGGCTCATGCTGAAGCTCAAAATCAGGG
GCAGCAAGAATACTGAGCGGCAAGGGCCAACGCAATGGCTGAAGAGGGGG
GGCGCCCGCGGGGGCTCTGCCCCCCAAACCGGTTCCGCAACGCCCACAGC
CGGCGATGCAGAGGACGTGGCCATGATTGGCAGTGCCCTGTGGAAGGTCC
ACAGGCCATGA
back to top