mRNA_3527 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A835YKM7_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM7_9STRA) HSP 1 Score: 392 bits (1006), Expect = 4.330e-138 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
Query: 1 MASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPEDHDGA 567
MASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPEDHDGA
Sbjct: 1 MASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPEDHDGA 189
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: D8LAV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV0_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.510e-80 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 1
Query: 4 ASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGK--ILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPED 555
+NRFL++NPE GDLNQYWYSK TI+A+V EV EFG GTAFLSTPSIYFS ++R KCKVFD+DT W KDPGFV +D+ K D+P L GTF MVV+DPPF+ R+VWE+Y AT +LLL+PGG +L +TI EN M ELL PC FKPSIP+LVYQY LY NYDS L NPEIP +
Sbjct: 6 GKRNRFLMKNPENGDLNQYWYSKATIDAIVAEVGEFGSGGTAFLSTPSIYFSLDRDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQVWESYTAAT--KLLLRPGGARLVLCSTILENAPFMEELLGASPCEFKPSIPNLVYQYSLYVNYDSKRLASCNPEIPSE 189
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A8J8NP72_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP72_HALGN) HSP 1 Score: 211 bits (536), Expect = 1.450e-66 Identity = 111/186 (59.68%), Postives = 134/186 (72.04%), Query Frame = 1
Query: 1 MASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTP-AEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLL-QPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPE 552
M S N FL ++ EK D NQYWYSK TI + E +FG + AFLSTPSIYFS EI+ +VFD DT + KDPGFV++DFNK +D+PADLH F MVVIDPPFI REVWE YA TAA+L+L + GGKIL +TI ENE + ELL K F+PSIP+LVYQY LY+NY+S L +NPEIP+
Sbjct: 1 MDSLNPFLAKHKEKSDFNQYWYSKATINFMASECEQFG-QKIAFLSTPSIYFSLKNKEIKAASRVFDFDTKFNKDPGFVFYDFNKPEDIPADLHNYFDMVVIDPPFITREVWEKYA--TAAKLILIKEGGKILLSTIDENEGFIDELLGAKRRAFRPSIPNLVYQYSLYSNYESEGLLAKNPEIPD 183
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A250WRC4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRC4_9CHLO) HSP 1 Score: 210 bits (535), Expect = 2.200e-66 Identity = 105/186 (56.45%), Postives = 132/186 (70.97%), Query Frame = 1
Query: 4 ASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTP--AEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPED 555
SKNRFL++ E LNQYWYS TIEALV E++ AFLSTPS+YFS P +E+++ VFD D W+ DP F +DFNK +D+P +L F MVVIDPPFI REVWE Y A A+LLL+ GK++A+T+AEN+ L++ELL KPC FKPSIPHL+YQY +TNY L ++NPEIPED
Sbjct: 4 TSKNRFLIKTSENELLNQYWYSAATIEALVQEILSSASR-VAFLSTPSVYFSLPKDSEVKKSSWVFDFDEQWRTDPHFCKYDFNKPEDLPGNLLNDFDMVVIDPPFITREVWEKYTKA--AKLLLKNEGKVIASTVAENDGLLSELLGSKPCNFKPSIPHLIYQYNFFTNYKPTALAEKNPEIPED 186
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A6U1KXA3_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1KXA3_9CHLO) HSP 1 Score: 207 bits (528), Expect = 2.380e-65 Identity = 104/182 (57.14%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 13 NRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPA--EIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPE 552
NRFL+ + EK D NQYWYS TI A+V E ++ AFLSTPSIYFS IRQ V D+D W K+PGF +DFNK +D+P + G F VVIDPPFI EVW YA A+LLL PGGKI+ TT+AEN+E++ E+L V PC F+PSIPHLVYQY LYTNY+S +++NPEIPE
Sbjct: 7 NRFLLTHQEKADFNQYWYSAKTIAAVV-EELQLVATKVAFLSTPSIYFSLKKGDPIRQASWVMDLDQQWAKEPGFFAYDFNKPEDLPGECLGAFDCVVIDPPFITEEVWAKYA--ATAKLLLSPGGKIILTTVAENKEMLKEMLGVAPCAFQPSIPHLVYQYNLYTNYESETFSRKNPEIPE 185
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A7S1RVF2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RVF2_ALECA) HSP 1 Score: 207 bits (527), Expect = 5.730e-64 Identity = 98/181 (54.14%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 4 ASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEI 546
A +N FL E+GDLNQYW+S+ TI A V E+V+ GG A +S+PS+YFS P IR CKV D D W DPG+V++DFN + +P HG+F V++DPPFI REVW YAM +LLL+ GG IL TTIAE+ ++M ELLD+ P +F+PSIP LVYQY +YTNY S L + NPE+
Sbjct: 17 ADQNGFLAETTERGDLNQYWFSRDTISAFVAEIVDAGGNA-ALVSSPSVYFSLPDSIRVTCKVLDYDQQWASDPGYVFYDFNDPEALPVQCHGSFDFVLVDPPFITREVWAKYAMTV--KLLLRDGGHILCTTIAESVDMMRELLDLHPVLFRPSIPSLVYQYSIYTNYASARLGRLNPEV 194
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A6A5C0I7_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C0I7_NAEFO) HSP 1 Score: 201 bits (512), Expect = 7.530e-63 Identity = 96/184 (52.17%), Postives = 132/184 (71.74%), Query Frame = 1
Query: 13 NRFLVRNPEKGDLNQYWYSKGTIEALVLEV----VEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPE 552
NRFL+RNPEK + NQYWYSK TI+ V + +E AF+STPS+YFS +E++++ K+F+ D W+KD GFV++DFN+ D V A L G F++++IDPPFI REVWE YA +AA+ L +PG K++ +TI+EN +LM LLDV P V++PSIPHLVYQY LYTN+ Q+N E+ +
Sbjct: 8 NRFLIRNPEKSEYNQYWYSKETIQTFVRVIEEHLLESSDHRVAFMSTPSVYFSMSSELQRQGKLFEYDKKWEKDQGFVFWDFNQPDKVDASLFGQFSLILIDPPFITREVWENYA--SAAKKLRKPGCKLICSTISENADLMKNLLDVTPVVYQPSIPHLVYQYNLYTNFSHELFEQKNSELAD 189
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A1R2CW92_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CW92_9CILI) HSP 1 Score: 200 bits (509), Expect = 1.720e-62 Identity = 97/182 (53.30%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 16 RFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEG---TAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPE 552
+F +R EK +LNQYW+S+ TI ALV E+ EG A +STPS+YFS P ++++ KVFDIDTA+++DPGFV+FDFN +++P + G F +V+IDPPFI REVWE YA A A+++ + G+I+ ++I EN ++ ELL V+PC+FKPSIPHLVYQY YTNY+S L+ NPEI E
Sbjct: 4 KFFMRYKEKENLNQYWFSENTISALVNEIESLFNEGFIQIACISTPSLYFSLPEQVKKCAKVFDIDTAFQRDPGFVFFDFNHPENIPDNFFGFFDVVIIDPPFITREVWEKYARA--AKVICKNTGRIILSSIVENAMMLEELLQVRPCLFKPSIPHLVYQYMFYTNYESRGLSVVNPEIIE 183
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A7S1G4D1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4D1_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.730e-62 Identity = 107/202 (52.97%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 4 ASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLL-------------------QPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPE 552
+NRFL+R EK DLNQYWYS +I A+ EVV GG+ F+STPSIYFS E R+ VFD+DT W+KDPGFV +DFN+ ++ P +L F M+V+DPPFI REVWE YA T RLL +P + L +TIAEN E+M ELL VKP FKPSIP+LVYQY LY NY+S L+ NPEIPE
Sbjct: 7 VKRNRFLLRTKEKEDLNQYWYSAKSIAAMAAEVVATGGKA-CFISTPSIYFSLTKEQREGNYVFDLDTQWEKDPGFVRYDFNEPENFPEELRHAFDMIVVDPPFITREVWEKYA--TTMRLLAKERSGEVDTGAGGEEEKKDEPPCRFLVSTIAENAEMMEELLGVKPQAFKPSIPNLVYQYNLYANYESEGLSVPNPEIPE 205
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Match: A0A6T7IIE5_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T7IIE5_BIGNA) HSP 1 Score: 200 bits (509), Expect = 2.020e-62 Identity = 102/181 (56.35%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 10 KNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTP--AEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGGKILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEI 546
+N+FL+R E GDLNQYWYS TI+A+V EV+E + AFLSTPS+YFS P +E+R KVFD+D +KKDPGFV +DFNK D++P ++HG F VVIDPPFI EV YA A A+LLLQ GKIL +T+ EN ++ +L PC F+PSIP LVYQY YTNY++ L + NPEI
Sbjct: 9 RNKFLLRTKEDGDLNQYWYSLNTIDAMVKEVME-NAKVCAFLSTPSVYFSLPKKSELRTNSKVFDLDKRFKKDPGFVEYDFNKPDEIPKEIHGKFDYVVIDPPFITEEVLTLYAKA--AKLLLQEEGKILISTLVENAAIVKKLYGGMPCKFQPSIPKLVYQYNFYTNYEASALKETNPEI 186 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159592 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3527 ID=mRNA_3527|Name=jgi.p|Trimin1|159592|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=570bp|location=Sequence derived from alignment at Contig_9:275564..277500+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCCAGCAAAAACAGGTTTCTGGTCAGAAATCCTGAGAAAGGAGATTTback to top protein sequence of jgi.p|Trimin1|159592 >Trimin1|159592|e_gw1.9.239.1 ID=Trimin1|159592|e_gw1.9.239.1|Name=jgi.p|Trimin1|159592|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=190bp MASKNRFLVRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIback to top mRNA from alignment at Contig_9:275564..277500+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3527 ID=mRNA_3527|Name=jgi.p|Trimin1|159592|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1937bp|location=Sequence derived from alignment at Contig_9:275564..277500+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:275564..277500+ >mRNA_3527 ID=mRNA_3527|Name=jgi.p|Trimin1|159592|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=570bp|location=Sequence derived from alignment at Contig_9:275564..277500+ (Tribonema minus UTEX_B_3156 )back to top |