mRNA_3467 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161561
Unique NamemRNA_3467
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA)

HSP 1 Score: 1072 bits (2773), Expect = 0.000e+0
Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 1 
Query:    1 MAGAAGDNTPWWADYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRVKARAPEPAAAVVA 1596
            MAGAAGDNTPWWADYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRVKARAPEPAAAVVA
Sbjct:    1 MAGAAGDNTPWWADYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRVKARAPEPAAAVVA 532
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE)

HSP 1 Score: 854 bits (2207), Expect = 4.590e-309
Identity = 411/506 (81.23%), Postives = 459/506 (90.71%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 1557
            DYPAPGVR+D+PRPPLEETS+NQR SA  S+    +PRP++PLKVA+IGAGLAGLS AKYL+DAGHEP + E+RDVLGGKV+AWQD DGDW+ETGLHIFFGAYPNVNQMF ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP  LPAP+NG+ AIL+NNEMLT+PEKI+FGIGL+PAILFGQ YVEECD L+V+EWM+KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD++  RGG + + +R+SKI LNDD TVK LK+Q G  VEAD YVS MPVD LKLMLP+ W+P+PYF  L+GL+GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDD+KSMLELVFAPAKDWIGRPDEEII ATM+EL  LFPNEI  DGSKAKLLKS VVKTPLSVYEAT GRE +RPVQTSP+ NFFLAGCFTKQKYLASMEGATFSGKL A+A+A+AA+AG +
Sbjct:   51 DYPAPGVRKDYPRPPLEETSQNQRDSAAFSQAFVDMPRPDRPLKVAVIGAGLAGLSCAKYLSDAGHEPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMNQRISKIMLNDDKTVKGLKMQDGSMVEADAYVSTMPVDILKLMLPDEWKPMPYFDKLNGLEGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRPDEEIIQATMEELYRLFPNEIMRDGSKAKLLKSAVVKTPLSVYEATAGRELYRPVQTSPLANFFLAGCFTKQKYLASMEGATFSGKLAARALADAAMAGTI 556
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA)

HSP 1 Score: 850 bits (2197), Expect = 1.640e-307
Identity = 410/506 (81.03%), Postives = 458/506 (90.51%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 1557
            DYPAPGVR+D+PRPPLEETS+NQR SA  S+    +PRPE+PLKVA+IGAGLAGLS AKYL+DAGHEP + E+RDVLGGKV+AWQD DGDW+ETGLHIFFGAYPNVNQMF ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP  LPAP+NG+ AIL+NNEMLT+PEKI+FGIGL+PAILFGQ YVEECD L+V+EWM KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD++  RGG + +E+R+S++ LNDD TVK LK+Q G TV AD YVS MPVD LKLMLP+ WRP+PYF+ L+GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDDEKSMLELVFAPAKDWIGRPDE II ATM+EL  LFPNE++ DGS A+LLKS VVKTPLSVYEAT GRE +RPVQTSPI+NFFLAGCFTKQKYLASMEGATFSGKL A+A+A+AA AG +
Sbjct:   52 DYPAPGVRKDYPRPPLEETSQNQRDSAAFSQTFIDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHEPIVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMAKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISQVLLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLMLPDEWRPMPYFEKLNGLTGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKDWIGRPDEAIIEATMEELYRLFPNELNKDGSGAQLLKSAVVKTPLSVYEATAGRELYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAAAGTI 557
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI)

HSP 1 Score: 843 bits (2177), Expect = 2.030e-304
Identity = 407/506 (80.43%), Postives = 456/506 (90.12%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 1557
            D+PAPG R+D+PRPPLEETSENQR SA  S+    +PRPE+PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKV+AWQD DGDWVETGLHIFFGAYPNVNQMF ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP  LPAP+NG+ AIL+NNEMLT+PEKI+FGIGLLPAILFGQ YVEECD L+VS+WM+KQGVP+RVN+EVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD++  RGG + +E+R+S+I LNDD TVK LK+Q G TV AD YVS MPVD LKL LPE WRP+PYF+ L+GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDD+KSMLELVFAPAKDWIG+ DE+II ATM EL  LFPNE+S DGS AKLLKS VVKTPLSVYEAT GRE +RPVQT+P++NFFLAGCFTKQKYLASMEGATFSGKL A+A+ +AA+AG V
Sbjct:   55 DFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDILKLALPEAWRPMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGKSDEDIIEATMGELYRLFPNELSKDGSGAKLLKSAVVKTPLSVYEATAGRELYRPVQTTPVSNFFLAGCFTKQKYLASMEGATFSGKLAARALCDAAIAGTV 560
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE)

HSP 1 Score: 836 bits (2160), Expect = 6.530e-302
Identity = 404/512 (78.91%), Postives = 453/512 (88.48%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRVKARAPE 1575
            DYPAPGVR+D+PRPPLE+TS+NQR +A  S+   ++PRP +PLKVA+IGAGLAGLS AKYL+DAGH P + E+RDVLGGKV+AWQD DGDW+ETGLHIFFGAYPNVNQMF ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRF+FP  LPAP+NG+ AIL+NNEMLT+PEKI+FGIGL+PAILFGQ YVEECD L+V+EWM KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD++  RGG + + +R+S I LNDD TV+ LK+Q G  VEAD YVS MPVD LKLMLPE WRP+PYF+ L GL GVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDD+KSMLELVFAPAKDWIGR DE+II ATM EL  LFPNE++ DGS AKLLK  VVKTPLSVYEAT GRE +RP QTSPI NFFLAGCFTKQKYLASMEGATFSGKL A+A+A+AA+AG +  +  E
Sbjct:   49 DYPAPGVRKDYPRPPLEDTSQNQREAAAFSQTFINMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHNPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMTKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMIARGGELRMNQRISSILLNDDKTVRGLKMQDGSMVEADAYVSTMPVDVLKLMLPEEWRPIPYFEKLSGLTGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRSDEDIIDATMGELYRLFPNELARDGSGAKLLKYAVVKTPLSVYEATAGREMYRPEQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIAGTIPLKEKE 560
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE)

HSP 1 Score: 832 bits (2150), Expect = 2.710e-300
Identity = 401/506 (79.25%), Postives = 457/506 (90.32%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 1557
            DYP  GVR+D+PRPPLEETS+NQR +A  S+ I  LPR E+PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKVSAWQD DGDWVETGLHIFFGAYPNVNQMFKEL IEDRLQWKSHSMIFAMPGQQT +GFQRFSRF+FP  LPAP+NG+ AIL+NN+ML++PEK++FGIGL+PAILFGQ YVEECD+L+V+EWM+KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADY+  RGG + +++R+SKI ++DD TVK L++Q G  VEAD YVS MPVDPLKLMLPE W+ LPYF+ L+GL+GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDD+KSMLELVFAPAK+WIGRPD EII ATM+EL  LFPNE++ DGS A+L+K  VVKTPLSVYEAT GRE +RPVQTSPI NFFLAGCFTKQKYLASMEGATFSGKL A+A+A+AA+A  V
Sbjct:   56 DYPPQGVRKDYPRPPLEETSQNQRDAASFSQAIADLPRTERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLSFPEKLQFGIGLIPAILFGQRYVEECDELTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELRMKQRISKILVHDDKTVKGLQMQDGSIVEADAYVSTMPVDPLKLMLPEEWKQLPYFQKLEGLRGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKEWIGRPDSEIIEATMEELYRLFPNEMNRDGSGARLVKVAVVKTPLSVYEATAGRELYRPVQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAAKALADAALAETV 561
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE)

HSP 1 Score: 831 bits (2146), Expect = 9.490e-300
Identity = 406/506 (80.24%), Postives = 449/506 (88.74%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 1557
            DYPAPGVR+D+PRPPLEETS+NQR SA  S     LPRPE+PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKVSAWQD DGDWVETGLHIFFGAYPNVNQMFKEL IEDRLQWKSHSMIFAMPGQ+TAEGFQRFSRFEF   LPAP+NG+ AIL+N EMLT  EKI+FGIGL+PAILFGQ YVEECD L+V+EWM+KQGVP+RVN+EVFIAMAKALNFIDP NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADY+  +GG +   +R++ I LN D TVK L+++ G  VEAD YVS MPVD LKLMLP+ WRP+PYF+ L+GL GVPVINIH+WFD+KLTTVDHLLFSRSPLLSVYADM+LTC GYRDDEKSMLELVFAPAK+WIGRPDE+II ATM EL  LFPNEIS DGS AKLLK  VVKTPLSVYEAT GRE +RPVQT+PI NFFLAGCFTKQKYLASMEGATFSGKL A+A+AEAA+AG V
Sbjct:   52 DYPAPGVRKDYPRPPLEETSQNQRDSAAFSRSFLELPRPERPLKVAVIGAGLAGLSCAKYLSDAGHQPLVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTLTEKIQFGIGLIPAILFGQKYVEECDCLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPGNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLAKGGELRTNQRVATILLNGDQTVKGLQMRDGSLVEADAYVSTMPVDVLKLMLPDQWRPMPYFEKLNGLSGVPVINIHMWFDKKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKEWIGRPDEDIIDATMGELYRLFPNEISKDGSGAKLLKYAVVKTPLSVYEATAGREAYRPVQTTPIRNFFLAGCFTKQKYLASMEGATFSGKLAAKALAEAAIAGTV 557
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: Q5UAX3_HAELA (Phytoene dehydrogenase n=4 Tax=Haematococcus lacustris TaxID=44745 RepID=Q5UAX3_HAELA)

HSP 1 Score: 711 bits (1836), Expect = 1.360e-252
Identity = 350/493 (70.99%), Postives = 406/493 (82.35%), Query Frame = 1 
Query:   58 VRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAE 1536
            V +D+P P  + +   Q A + LS  +++ PRP KPL+V I GAGLAGLS AKYL DAGH P + E RDVLGGKV+AW+D DGDW ETGLHIFFGAYPN+  +FKELGI+DRLQWK HSMIFAMP    A G   FSRF+FP+ LPAP NGI AIL NN+ML+WPEKIRF IGLLPAI+FGQ Y EE D+L+V+EWMRKQGVP+RVNEEVFIAMAKALNFI+PD+LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQPM DY + RGG ++   R+ +I LNDD +VK L L  G+TVE D+Y+SAMPVD +K+++P+PW  +PYFK L+GL+GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+ TC  Y D++KSMLELVFAPAK+WIGRPDEEIIAATM ELE LFP E+ AD S AK+LK  VVKTPLSVY++T GRE FRP Q SPI+NF+LAG +TKQKYLASMEGA FSGKL  +AI E
Sbjct:   38 VAKDYPTPDFQSSDTYQEALS-LSTKLRNAPRPAKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMPD---APG--EFSRFDFPE-LPAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDDKSVKHLALTNGQTVEGDLYISAMPVDIMKILMPDPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADEKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYLASMEGAVFSGKLVTEAIVE 523
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: W7TCB4_9STRA (Amine oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCB4_9STRA)

HSP 1 Score: 707 bits (1825), Expect = 1.350e-250
Identity = 357/508 (70.28%), Postives = 413/508 (81.30%), Query Frame = 1 
Query:   40 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPE--KPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDD---NTVKCLKLQGGETVEADVYVSAMPVDPLKLMLP----EPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAE 1536
            DYP PG RRD+PRP LEETS + + + QLSE IK  PRP+  KP  V I GAGLAGLSTAKYL DAG +P + E+RDVLGGKVSAWQD DGDW+ETGLHIFFGAYPN+ ++FKEL IE+RLQWKSHSMIFAMPG+Q AEG QRFSRF+FP FLPAP NGI AIL+N+EMLTWPEKI+FGIGLLPAI+ GQ YVE+ D LSV +WM++QGVP+RVN+EVFIAMAKAL FIDPD LSMT+VLTALNRFLQE  GSKMAFLDGPPPTRLC+PM +Y+ Q GG V L   + ++ L+ +   + V   +L  G  V+ D+YVSAMPVD +K ++P    E W    YF  LD L+GVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADM+ TC GY+DDEKSMLELVFAPAKDWIG+ DE+I+AATM+EL  LFP E+SADGSKAKL+KS VVKTP SVY   PG+E FRP Q +P+ NF+LAG +TKQ YL SMEGAT SGKLCA  IA+
Sbjct:   55 DYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPT-VVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQ 558
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BLAST of jgi.p|Trimin1|161561 vs. uniprot
Match: A0A383V3D0_TETOB (Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V3D0_TETOB)

HSP 1 Score: 704 bits (1817), Expect = 6.330e-250
Identity = 348/493 (70.59%), Postives = 403/493 (81.74%), Query Frame = 1 
Query:   58 VRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAE 1536
            V RD+P+P  E     Q A A LS+ +++ PRPEKPLKV IIGAGLAGLSTAKYL+DAGH P + E RDVLGGKV+AW+D DGDW ETGLHIFFGAYPN+  +FKEL IE+RLQWK HSMIFAMP          FSRF+FP  +PAP NGI AIL NN+MLTWPEKI+F +GLLPAI+ GQ YVE+ DKL+V+EWMR+QGVP RVN+EVFIAMAKALNFIDPD+LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQP+ DY   +GG + +  RL +I+LN D +VK L +  GET+E D+YVSAMPVD +KL+ PEPW  +PYF  L+GL+GVPVINIH+WFD+K  TVDHLLFSRSPLLSVYADM++TC  Y D  KSMLELVFAPA+ WIGRPDEEIIAATM ELE LFP EI+AD SKAK+LK  VVKTPLSVY+AT GRE++RP Q SPI+NF+LAG +TKQKYLASMEGA FSGKL A+A+ E
Sbjct:   48 VARDYPKPAFETAGTFQEAQA-LSDKLRNAPRPEKPLKVVIIGAGLAGLSTAKYLSDAGHIPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNLMNVFKELNIEERLQWKEHSMIFAMPDSPG-----EFSRFDFPD-IPAPFNGIFAILANNQMLTWPEKIQFALGLLPAIVGGQKYVEDQDKLTVTEWMRQQGVPNRVNDEVFIAMAKALNFIDPDDLSMTVVLTALNRFLQEKHGSKMAFLDGAPPERLCQPLVDYFTAKGGQIRMNARLKEIKLNADGSVKELAMVNGETIEGDLYVSAMPVDIMKLLTPEPWAAMPYFSQLNGLEGVPVINIHIWFDQKFKTVDHLLFSRSPLLSVYADMSVTCKEYADPNKSMLELVFAPAEGWIGRPDEEIIAATMTELERLFPTEIAADQSKAKILKYKVVKTPLSVYKATAGREEYRPTQRSPISNFYLAGDYTKQKYLASMEGAIFSGKLAAEALVE 533
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161561 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8Q9_9STRA0.000e+0100.0015-cis-phytoene desaturase, chloroplastic/chromopl... [more]
A0A2H4YKI9_9PHAE4.590e-30981.23Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62... [more]
A0A2H4YKJ4_SACJA1.640e-30781.03Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepI... [more]
D8LPN3_ECTSI2.030e-30480.43Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A2H4YKK3_9PHAE6.530e-30278.91Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A... [more]
A0A2H4YKJ7_9PHAE2.710e-30079.25Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772... [more]
A0A2H4YKJ3_9PHAE9.490e-30080.24Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=... [more]
Q5UAX3_HAELA1.360e-25270.99Phytoene dehydrogenase n=4 Tax=Haematococcus lacus... [more]
W7TCB4_9STRA1.350e-25070.28Amine oxidase n=2 Tax=Monodopsidaceae TaxID=425072... [more]
A0A383V3D0_TETOB6.330e-25070.59Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:1165432..1173946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161561|e_gw1.17.178.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC01214,RC01958,RC03092,RC03093
KEGG ReactionR04786,R04787,R07510,R09652,R09653,R09654
KEGG ModuleM00097
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG koko:K02293
EC1.3.5.5
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009534,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016166,GO:0016491,GO:0016627,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0055114,GO:0071704,GO:1901576
Preferred namePDS1
Descriptionoxidoreductase activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1231@1|root,KOG0029@2759|Eukaryota
Evalue3.33e-305
Seed ortholog2880.D8LPN3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhytoene desaturase, chloroplast precursor
Ec32 orthologEc-18_001850.1
TranscriptId161883
TrackFilteredModels1
ProteinId161561
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161561gene_3467Tribonema minus UTEX_B_3156 geneContig_17 1165432..1173946 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161561Trimin1|161561|e_gw1.17.178.1Tribonema minus UTEX_B_3156 polypeptideContig_17 1165432..1173946 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3467_10exon_3467_10Tribonema minus UTEX_B_3156 exonContig_17 1165432..1165525 -
exon_3467_9exon_3467_9Tribonema minus UTEX_B_3156 exonContig_17 1165856..1165960 -
exon_3467_8exon_3467_8Tribonema minus UTEX_B_3156 exonContig_17 1166727..1166860 -
exon_3467_7exon_3467_7Tribonema minus UTEX_B_3156 exonContig_17 1167190..1167270 -
exon_3467_6exon_3467_6Tribonema minus UTEX_B_3156 exonContig_17 1167803..1168033 -
exon_3467_5exon_3467_5Tribonema minus UTEX_B_3156 exonContig_17 1168772..1168864 -
exon_3467_4exon_3467_4Tribonema minus UTEX_B_3156 exonContig_17 1169539..1169715 -
exon_3467_3exon_3467_3Tribonema minus UTEX_B_3156 exonContig_17 1171173..1171493 -
exon_3467_2exon_3467_2Tribonema minus UTEX_B_3156 exonContig_17 1172187..1172378 -
exon_3467_1exon_3467_1Tribonema minus UTEX_B_3156 exonContig_17 1173776..1173946 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3467CDS_3467Tribonema minus UTEX_B_3156 CDSContig_17 1173776..1173946 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3467 ID=mRNA_3467|Name=jgi.p|Trimin1|161561|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1599bp|location=Sequence derived from alignment at Contig_17:1165432..1173946- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGGAGCAGCCGGGGATAACACACCATGGTGGGCGGACTACCCGGC
GCCGGGCGTGCGCAGGGACTTTCCCAGGCCACCTCTTGAGGAGACCAGTG
AAAATCAGAGGGCGTCTGCGCAGCTGAGCGAATATATCAAGTCGCTGCCG
CGACCAGAGAAGCCGCTTAAGGTGGCCATCATCGGCGCGGGCCTCGCGGG
CCTCTCCACGGCCAAGTACCTGACGGACGCGGGGCACGAGCCCACCATCT
ACGAGTCGCGCGACGTGCTCGGCGGCAAGGTGTCGGCGTGGCAGGACGCG
GACGGCGACTGGGTGGAGACGGGGCTGCACATCTTCTTCGGCGCGTACCC
AAACGTCAACCAGATGTTCAAGGAGCTGGGCATCGAGGACCGCCTGCAGT
GGAAGTCGCACTCCATGATCTTCGCCATGCCGGGGCAGCAGACGGCGGAG
GGCTTCCAGCGCTTCTCGCGCTTTGAGTTCCCTCAGTTCCTGCCGGCCCC
CATCAACGGCATCGCGGCAATTCTCATGAACAACGAGATGCTGACGTGGC
CCGAGAAGATCCGCTTCGGCATCGGGCTCCTGCCGGCGATCCTGTTCGGG
CAGGCGTACGTCGAGGAGTGCGACAAGCTCAGCGTCTCGGAGTGGATGCG
CAAGCAGGGCGTGCCGGAGAGGGTCAACGAGGAGGTGTTCATCGCCATGG
CCAAGGCCCTCAACTTCATCGACCCCGACAACCTGTCGATGACGGTGGTG
CTGACAGCGCTCAACCGCTTCCTCCAGGAGACGCACGGCTCCAAGATGGC
CTTCCTGGACGGGCCGCCGCCAACGCGCCTCTGCCAGCCCATGGCTGACT
ACGTCGAGCAGAGGGGGGGGTCCGTGCTGCTGGAGAAGCGCCTGAGCAAG
ATTGAGCTCAACGACGACAACACCGTCAAGTGCCTCAAGCTGCAGGGCGG
CGAGACGGTCGAGGCGGACGTCTACGTGAGCGCGATGCCAGTGGACCCTC
TCAAGCTCATGCTGCCCGAGCCGTGGCGCCCGCTGCCGTACTTCAAGCTG
CTGGACGGCCTCAAGGGGGTCCCCGTCATCAACATACACCTCTGGTTCGA
CAGGAAGCTCACCACGGTGGACCACCTGCTGTTCAGCCGCTCGCCGCTGC
TGAGCGTGTACGCCGACATGGCGCTCACGTGCAATGGGTACCGGGACGAC
GAGAAGTCAATGCTGGAGCTGGTTTTTGCGCCCGCCAAGGACTGGATCGG
CAGGCCCGATGAGGAGATCATCGCGGCCACCATGAAGGAGCTGGAGATCC
TGTTCCCCAACGAGATCAGCGCGGACGGAAGCAAGGCCAAGCTGCTCAAG
TCGCACGTCGTCAAGACCCCCCTGTCCGTGTACGAGGCGACCCCCGGAAG
GGAGGACTTCAGGCCGGTCCAGACGTCCCCCATCAACAACTTCTTCCTCG
CGGGCTGCTTCACCAAGCAGAAGTACCTGGCCTCCATGGAGGGTGCCACA
TTCAGTGGCAAGCTATGCGCACAGGCGATCGCTGAGGCCGCTGTTGCGGG
CAGAGTCAAGGCACGCGCGCCAGAGCCTGCCGCCGCCGTTGTCGCATAA
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protein sequence of jgi.p|Trimin1|161561

>Trimin1|161561|e_gw1.17.178.1 ID=Trimin1|161561|e_gw1.17.178.1|Name=jgi.p|Trimin1|161561|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=533bp
MAGAAGDNTPWWADYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLP
RPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDA
DGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAE
GFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFG
QAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVV
LTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSK
IELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKL
LDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDD
EKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLK
SHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGAT
FSGKLCAQAIAEAAVAGRVKARAPEPAAAVVA*
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mRNA from alignment at Contig_17:1165432..1173946-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3467 ID=mRNA_3467|Name=jgi.p|Trimin1|161561|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8515bp|location=Sequence derived from alignment at Contig_17:1165432..1173946- (Tribonema minus UTEX_B_3156 )
ATGGCGGGAGCAGCCGGGGATAACACACCATGGTGGGCGGACTACCCGGC
GCCGGGCGTGCGCAGGGACTTTCCCAGGCCACCTCTTGAGGAGACCAGTG
AAAATCAGAGGGCGTCTGCGCAGCTGAGCGAATATATCAAGTCGCTGCCG
CGACCAGAGAAGCCGCTTAAGGTGTGTACCATGACTGGCAAACCTTTTTT
GGCGGCCATTGGGTCTGCTGCATTGCAGATACTTCTAGAGGAGGTGATGG
GCAAGCGTTCCACCTGAAGGGAGGGCCAGCTTTGATGTTGAAGTATCGTC
GTTTTGTGGAGGCTGCTGTTGATCGCATTACCACAATGTGCTGCCACTCA
GGCACCACCAGCACCGTGTCACGTATGATAATGCACCTGCTTTCTGACCC
ATGTACTGGAGAATATGTGACCGAACGGGCAAGTACTTATAGTATCAGAA
GTTTCTCGCCACGAAAGGTGTTGGTGCGCACATTCTTCTGTCAGTTACCC
GACGCTGCCTCAATGCTCAGCTGAGGGCCTACGTATACATCAAAGCAAGC
CTGCTTCTTGCACCTGGCTTCAAAGCACCTGTGCTTCAAATCATACCGGC
TAATTGCACTGGAGTTCAAACCTCGTTTGGTGCGTATTGTCAAAACCTTT
GGCGCTGCTCAATCATTGGCCACCTGCTGTTGGCAAGCACTGTTGGCAGC
CATGTTGACAGCCACATTCCCTGCGCTTGGATTGTGCAACCAATTGCGCA
GTGGTACTCACATGCAGCCATGCAACAGAAGCCGATGTGCTCTTGGCAGA
TAATTTCTAGTTCTGACCAGTACGTGGTGCATGCATTATGTGGCGCCACC
GCTGTGTTTGTGAGCGAAAGCTCAGGCTCTTTTCCACTATGATGAGGCAT
GTTTTCACAGGTCCGGTGCAGCGCACTGCGCAAAGTTCCAAGAACTCCTA
AGACAGCACCAAGCAGTTGAAATCCAGCAGTTGCAACGCGCACAACAAGC
CAATCGAAGGCATCCGTGCTATTCGCCATGCACGTCAGGGGGGGCACTGC
TTAAAGCCTTGCCTCTGCCGACATGATTGCTGTATGTCTTGATATCTCAT
CATTACCTGGAAGCAATTTCATGATAGCAGGTCTGGTGTGCGGACCTGCG
GTGCAGTGGGTGTGGGTGTTGTGTCCCAAACGTGCAAAGGGAGGGGGAAG
AAGATGAAACTGCTCGCTGAAGAGCGATAGTCAGATGCAGTGCAAAATCA
CGCACCTCCTAGAAGTGCACTGCTGAAGTTGACAACATCGCGCCGATGGT
CGTGCGGAGCATCACCAGTGCGCTGCCTTGGCGAGCGTGTAGGGGGCACT
TCAGCGTGGGGGGGCCAGGCGCAGCTGCACCGCGCTGGCCCGGCCCACCT
TAACAAAGACGCCAGCGCAGTACCCTCTCTCCACGCGTGGCGCCGTGTCC
CCCCCCCCTGCCCCCCTACCTTTATCAACACCACCTCCTACCTACATGCC
CCCCAGCTCCCCATCTAGATGCCTACCCCAGTACCCACCCATACATACCC
CCCCGTGCTGCGCCGCAGGTGGCCATCATCGGCGCGGGCCTCGCGGGCCT
CTCCACGGCCAAGTACCTGACGGACGCGGGGCACGAGCCCACCATCTACG
AGTCGCGCGACGTGCTCGGCGGCAAGGTGTCGGCGTGGCAGGACGCGGAC
GGCGACTGGGTGGAGACGGGGCTGCACATCTTCTTCGGCGCGTACCCAAA
CGTCAACCAGGTGCGCGGCGACAGTGGCGGCGCTGCGCTGTGGCGTCTGC
GGTGCTGGTTTGCTAGCGCGTCAGCGCTCTGGTTGCAGCAGCGCCCGATG
GTGAAGCTCTGCTGGGGGGGTTTGTCGTGGTCGCAGCAGCGCTCGGCCAG
GGTGTCAGCGCTCCGTTCTGGTTGTTACAGCACCGCTCTGTTAGGGTGGC
GGTGCTCCGCCGTGGTGGCTGCAGCGCCCCGCATTGCTGTGCAGGTGTGC
ATTCTTGTCTGGTTGCAAGCGCTCGGATCTGGTGAGCCGAGCGGGCTGCG
CTGCGCCGCAAGTGCCGCAATACCGTGGCAGCAACGCTTTGATACCACGC
GGCAACAGTGGCTGCGCCTTTGCTCGCATGGGCAGGGGCATCACATTCGG
TGCGATTGCAGGGCCTGCTGCGCAGTGTCAATGCCCATCGCGGGAGTGTA
CGCGTCGCGGTTGTGCAAGGCCGAAGACCGTCTTTGTAGCAGCATGAACC
CTAGCTGAATCCACTAGGCACCTCAGCGAGACCCGCCTGCAGCAGCAGTT
GCATGCCAGTATTCATGCTGTGCCGCCCTTTCAGCGCTGGCCATTTCGCT
TCAAGTGCACACCCAGCGATCCCCGCGCCCCGCACCCTATTAACCCCCCC
CCCCCCCTCTTTCCAAAACCCCTCTCGCCCCCCCCCACCAACCTCACCAC
CAGATGTTCAAGGAGCTGGGCATCGAGGACCGCCTGCAGTGGAAGTCGCA
CTCCATGATCTTCGCCATGCCGGGGCAGCAGACGGCGGAGGGCTTCCAGC
GCTTCTCGCGCTTTGAGTTCCCTCAGTTCCTGCCGGCCCCCATCAACGGC
ATCGCGGCAATTCTCATGAACAACGAGATGCTGACGTGGCCCGAGAAGAT
CCGCTTCGGCATCGGGCTCCTGCCGGCGATCCTGTTCGGGCAGGCGTACG
TCGAGGAGTGCGACAAGCTCAGCGTCTCGGAGTGGATGCGCAAGCAGGGC
GTGCCGGAGAGGGTCAACGAGGAGGTGCGCGCGCGGGTGTGGCGCTCCTC
CGCTCTTCTGATTTACTTGAAGTATACGGGCGTGGAAATGTTGATGTGTA
GAGTGGTGATGTTGAGGAGTGGATGCGCAAGCAGGGCGTGCCGGAGAGGG
TGGAACGAGGAGGTGCGTGGTCCCGCTTTTCTGATTCACAGATGCGCAGG
GTGTACTTCAAGTACATGCATACTTCACATGTATACATCAGAGTGGATGC
GCAAGTAGGTCGTGCGTGCTGGAGACGGTCGATGGCGAGGTGCGCAGCTG
ACGCACCACCTTTCTGACGGTCTGTACATGTATGTATGTGATATTGACGT
CTCACTTCAAACGTACAGGAATGAGGATGGGTGCCAGGTTGTAGCTGCTA
CTGCGGTCCTGCAGCGCCCTCGGCACGTGAGGGGGTTTATGTCGAAGAGA
GGGTCGGCAAGGGGGTGGGCGCTTTTCCTTTCTGATGCTCACGTCGCACG
ACTGGCAGTTGTACTTCAACGGCAAGCCCAGCAGCGCTCTGCCGCAGTGT
TTGCGAGAGTGCAGGCAACACGGCAGCGAACACCTCGCTCTGTTGCGGTG
GCCGGCGAGACGCGCTGTTTGACAGCAGCGCTCTTCAAGCACAGTGTGCT
CAGACATTCGTGTTGAACACATTTATGAAGAGGGACACGGGCGTGTTGCA
GACATCACGACTTGAAGTTGAATATGATGCGCGCACCCCGTCAGTTGTGA
ATTCTGAGCGGAGCGCCGCAGCGATGCATGCGCGCGCAAGTGCGGCACGC
ACAACGAGCGGATTGCCTAGAGGGTGCGTGGGAGGGAGAGGCTGTTTCAG
TTTTCAGGCTGCTTGGCGCTGCTGAGCTTGCCGCGGCGGGCGCACTAGCG
GCGGCGTGCGCGCGATCATGGCGTGAACTTCAAGTTACTGACTTCAAATC
AGTGACTTCAACACGTTTGTGTGCTCTCACGCACCGGCAGGGCGCCTTTG
GCAGGCAGTGCTGGCTGGCTGCTTTGGCTATTCCGGCGGTCAGCACTCTC
GCGTTCCTGCCACCTTCTTTAGGGTTAGGGTTAGCCTAACCCTAATCTAC
CGCATCTAGAGAATCTTGTGGTGTCGCTGCGCGCCCGTCCACCCTACCAT
TATCGCATGCTGTCGCTGGCCCCGCTTCCGACGCCTTGCCTGTGTTCTCG
CGCACCCCGCCGTCGCCAAACGGCAGCAGGCGTTCACTGCGCCATAGTGA
TCTAGCTGGTTACGCGGTGACTGCAACTCCAACCCCTCAGCGCACCACAT
GGCATGACATGCTGACTTCAACTTCAAACTTTGGCTAAGCGCATGTATAA
GTCAATCAAAGTCTTGGTTGATCTGTCTCAATGCGAAACTTAGTTTATTA
TACATTGATTTAGAGGTCATTAAATTAACTTCAACAGCCTGTGTTTGACC
TGTCGTAACCCCCCCCCCGCCCTTGCTGCAGGTGTTCATCGCCATGGCCA
AGGCCCTCAACTTCATCGACCCCGACAACCTGTCGATGACGGTGGTGCTG
ACAGCGCTCAACCGCTTCCTCCAGGAGACGCACGGCTCCAAGATGGCCTT
CCTGGACGGGCCGCCGCCAACGCGCCTCTGCCAGCCCATGGCTGACTACG
TCGAGCAGGTGGGTTTGGCAATTACGCCCTAGGTAGGTATACGCTCAAAG
GGGGTATACGTACAGGCCGCGGTGTGACTCGTGGCCGATTTCTGCAGCAG
CGGCGACCACGGTTACTGGAGGAAGGCATTCAATTCGACTGCTCACCACA
CCTTGTCACCTAGAACTCTGCGACCTTTTGATTTGTTCCCATGCGTACAC
AACAGATCAGGTATTCATGACAAGTGTGAGGCCCTGTGTGTGAGGACCAC
TGTAGTGGTGCTCTAGTGTGTATGCGCGCACTGGACAGAGGCAAGGGGTT
CAGAGGTTATGTACGGAAACGCATGCAGATGTGTATGTCTGTGTGCTGCA
GCGCACTAGGTGAGGGTATGCAGGATGGTTGGCGCCTACATGGCGGGCAC
GAGGCCCTAGAAGTGGGGTTCCATCTTGACGGCGCAGACCTGTGCCGGGC
GTACAGATGCGGTTGTGTACTCTACCACATTGTGCTACATTATGCAATCC
GATTAGCCGGCCTTCACGCAGGTGCAACCTCAACACCAAGGGGTGAGAGC
GTCACACTGGCGCCAGCACCCGTTTCAGTCATCGACTGACAGCTCTCGAT
GCTGTGCATTGATATGCGCACTCCTAATATCTCATCTCCCCCCTCTTCCG
TCCCCCCGTGTTGCTGCTGTTGCTGTGAGCAGAGGGGGGGGTCCGTGCTG
CTGGAGAAGCGCCTGAGCAAGATTGAGCTCAACGACGACAACACCGTCAA
GTGCCTCAAGCTGCAGGGCGGCGAGGTGGGCAAACTTCGACTTTATGTCT
CTTTGTAGTGTTGTGCGTAGGAGCAGCAGCGCTTGAAGTGTCTTTTTTGT
GTTAACACTGAGACGCACCCCGTCTTTATTCATGTCCGCAGCTCCCCAAG
GCGTGGCACTCGAATGCATAGAGTAGAGCGCAGGGAGTTGAAAACGTTGC
GACCGCTGCTGAGTGCCTATGGCAGCGCAAACGTCCTGAAGAGCAGTATC
ACGACTGCACGCCCTCACACAGTACTGCTGCCTGCATGTAGCTCACTGCC
GCAGACGACGAGTATGGTCGTCATCATCGTGCCAGTGGCATCGCTGTAGT
GGCATCACTCTAGGGCCCACGCGACCTGCGCTGTTGCACACCATTTCTAC
TTGCATATGCTGCCTGTGACCCCGCTGCTGCCGTCAAATTGACAAAGTGC
CTCTTTGATTGTTGAGTAGTCGTGCGACACGATGTCTATCATATCATCTC
TCCATGCACATCAAAGTTTGACACTAAACAGTCACCACGCTCCACTGTCT
GCCGCGCGCCGCAGACCGTCGAGGCAGACGTGTACGTGAGCGCCATGCCC
TGGATGTGCCCTTCTGTTGATTCTAGTTCCCAACGCCAACCTGCCGCCCT
GAGGTCCTGTACCACCTGCACAACCGATCTTGTTCGAAAGTATCGCCCCT
CGTATCCATCAACCTTGAAGTTTGACTCTGATCCTTCACCGCGTCTCACC
GTTCGCTGCGCAGACGGTCGAGGCGGACGTCTACGTGAGCGCGATGCCAG
TGGACCCTCTCAAGCTCATGCTGCCCGAGCCGTGGCGCCCGCTGCCGTAC
TTCAAGCTGCTGGACGGCCTCAAGGGGGTCCCCGTCATCAACATACACCT
CTGGTTCGACAGGAAGCTCACCACGGTGGACCACCTGCTGTTCAGCCGCT
CGCCGCTGCTGAGCGTGTACGCCGACATGGCGCTCACGTGCAATGTGAGC
GAGCGTCGCCATTTGAACTATTGACTTACAGTTGGGCAGCGCTCTACGCG
CGGGGGGGTCTGGTACCGCTCGCGGCGGCGCTGAGGCAGGGGGGTGAGGG
AGGTTGCGCTGCGTGGGATGGGCGGGTTTTAATGTGTGTGCGAGTGTGTG
CTGCGGCATGCGGGAGCACCCAGCGGAAGCTGTTGCAAAACACTACGGTG
TGCTGTTGCATCAGGGCAGAGCCTCAAAGCGCACGCGCCGTCGCACGTGC
GACACCCAGTGCTCAATAGTTTACCGCAGTGCAGCGCTCCTGCGCTCGCT
CGCAGTTTCACTTCAACACAACGTGCGCGTGTGCATGGCATAGGGTCAGT
CATGTTGTGCATCCGCCTGCCCTGTGCCTTACTGTAACCCTAAATTGCTC
CGCTTGCGCCCTGTGCAATTGTGTGCTCCATGACCGCTGCACGAGGCACC
GCGTCGCTCCTTTGAGGACTGCCAGCACCTCGCTGCTGTCTCACCGTTTG
CGCTGTTTTGTGTTCTGCGACTGCAGGGGTACCGGGACGACGAGAAGTCA
ATGCTGGAGCTGGTTTTTGCGCCCGCCAAGGACTGGATCGGCAGGCCCGA
TGAGGAGGTGAGCACTCGTTGACTTGCTTGTGCCTTGTATTGTTGACAGA
TTCTTTTCAAGCAGGAAGCAGTCAGAAGCAGTAGTGATGACCAGATGTTG
AGCACAAAACGTGCCATGTTCAAGAGCACCTATGCTACACCGCACCGCAT
CCAAACACTGCACCAGGGACGCCCCACATGTGCCCAGTGCGATGACGTGG
CGCCGCTACGGCGCCTGCTGCTGCCGCTGTGCACTGCGCATCACATCATA
CAGCAGCTCTGCGCTGCGGCGCTGTCGCCTCCCTAGGGCAAAGCTCATCC
CTCGCTACGCTGGCGCCTTGCTGCTGCGCTGCGCAGATCATCGCGGCCAC
CATGAAGGAGCTGGAGATCCTGTTCCCCAACGAGATCAGCGCGGACGGAA
GCAAGGCCAAGCTGCTCAAGTCGCACGTCGTCAAGACCCCCCTGTCCGTG
TACGAGGCGACCCCCGGAAGGTGAGTGACAGGGGGTATGATGCCTCTTTT
TTATATACCTACCTGCCAGCTGCCCAAAGCTGCTCCAGTCGCACGTCGTC
AAGACCCCCCTGTCTGTGTACAAGGCGACCGCCGAAAGGTGAGTGATGGG
GGGTATGATGCAGCTTGCTTTTAATACCTACCCAGCAGTCTGCCCAATCA
GGGTTTGCGGCAAGCGCCTGGGCCTGAGGGGTGGCGATTACTTGCAACGC
TTATGATTGATGTGGTAGTACGGCGCACGCTGAGAGGCGACCCCTGGCAA
GTGAGCGGAGGGGGTATTGCACAGCTTTCATTACCTACCCTATGGACCAG
CCCCCGCACCTGACGGGGATCGCGCCGTTCGCGCGGGCTGCAGGAATCGA
CACCGCTCGCGCCGATATGGAGGGAGCGATAGCACGATGCACGCCTCGAG
GATATGGGCGGCACCGGCTTAGACTAGCGTGTGGCGGGGGTGCAATAGGA
TCAGCGGTATCAGAGCAGCTGATACAGGGGCGCGTCTCCAGACGGCGTGC
ACTTGGACGCGCAGTGCACGCGCCCGGCCCCCAGAAAATGTTGTCTTCCA
CAGAGAAAGTGTCGCCTCCACAGAGAAGAAGCCGCCACCCACATAGAAAA
TGCCGCCACCCATTGGTCAGGCAGCACCGGCAGCTGTCACTGCGCCGCTA
GTTCGAGCAGTGTAAGCAGCTGCACCGAACGTCAATCATTGTCTGACGCC
CCCTTCTCTGCACTGACTCGTGATGTGGTCTTACAGGGAGGACTTCAGGC
CGGTCCAGACGTCCCCCATCAACAACTTCTTCCTCGCGGGCTGCTTCACC
AAGCAGAAGTACCTGGCCTCCATGGAGGGTGCCACATTCAGGTGCGTCAC
TCTGACAGCAACTGTTAATATGCATCTACCTGAAAACAAAAGGTTTGCAG
GCACTGGCAACGGCAGAGTTGGCGGTAACATGTAGGCGTGACGCTTGCAC
CTGTCCCCTGCTTCGCTTCAAGATGCTGAAAGTAAGCTCAATTTGCTCAA
TTTAACACAATTACACGTTCACCTTGTAATGTTACCCAGTATTGCATGCT
CTGTTCACCTCATGAGACATTGAAGAGCCCTATGTACAACAAATACAATC
GTCCCCATGTCACTTTGTGCAGCCATCTCATCCTGTTCGCTTGCCCTCGT
TTCGTGCCTGTGACGTCGCAGTGGCAAGCTATGCGCACAGGCGATCGCTG
AGGCCGCTGTTGCGGGCAGAGTCAAGGCACGCGCGCCAGAGCCTGCCGCC
GCCGTTGTCGCATAA
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Coding sequence (CDS) from alignment at Contig_17:1165432..1173946-

>mRNA_3467 ID=mRNA_3467|Name=jgi.p|Trimin1|161561|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1599bp|location=Sequence derived from alignment at Contig_17:1165432..1173946- (Tribonema minus UTEX_B_3156 )
ATGGCGGGAGCAGCCGGGGATAACACACCATGGTGGGCGGACTACCCGGC
GCCGGGCGTGCGCAGGGACTTTCCCAGGCCACCTCTTGAGGAGACCAGTG
AAAATCAGAGGGCGTCTGCGCAGCTGAGCGAATATATCAAGTCGCTGCCG
CGACCAGAGAAGCCGCTTAAGGTGGCCATCATCGGCGCGGGCCTCGCGGG
CCTCTCCACGGCCAAGTACCTGACGGACGCGGGGCACGAGCCCACCATCT
ACGAGTCGCGCGACGTGCTCGGCGGCAAGGTGTCGGCGTGGCAGGACGCG
GACGGCGACTGGGTGGAGACGGGGCTGCACATCTTCTTCGGCGCGTACCC
AAACGTCAACCAGATGTTCAAGGAGCTGGGCATCGAGGACCGCCTGCAGT
GGAAGTCGCACTCCATGATCTTCGCCATGCCGGGGCAGCAGACGGCGGAG
GGCTTCCAGCGCTTCTCGCGCTTTGAGTTCCCTCAGTTCCTGCCGGCCCC
CATCAACGGCATCGCGGCAATTCTCATGAACAACGAGATGCTGACGTGGC
CCGAGAAGATCCGCTTCGGCATCGGGCTCCTGCCGGCGATCCTGTTCGGG
CAGGCGTACGTCGAGGAGTGCGACAAGCTCAGCGTCTCGGAGTGGATGCG
CAAGCAGGGCGTGCCGGAGAGGGTCAACGAGGAGGTGTTCATCGCCATGG
CCAAGGCCCTCAACTTCATCGACCCCGACAACCTGTCGATGACGGTGGTG
CTGACAGCGCTCAACCGCTTCCTCCAGGAGACGCACGGCTCCAAGATGGC
CTTCCTGGACGGGCCGCCGCCAACGCGCCTCTGCCAGCCCATGGCTGACT
ACGTCGAGCAGAGGGGGGGGTCCGTGCTGCTGGAGAAGCGCCTGAGCAAG
ATTGAGCTCAACGACGACAACACCGTCAAGTGCCTCAAGCTGCAGGGCGG
CGAGACGGTCGAGGCGGACGTCTACGTGAGCGCGATGCCAGTGGACCCTC
TCAAGCTCATGCTGCCCGAGCCGTGGCGCCCGCTGCCGTACTTCAAGCTG
CTGGACGGCCTCAAGGGGGTCCCCGTCATCAACATACACCTCTGGTTCGA
CAGGAAGCTCACCACGGTGGACCACCTGCTGTTCAGCCGCTCGCCGCTGC
TGAGCGTGTACGCCGACATGGCGCTCACGTGCAATGGGTACCGGGACGAC
GAGAAGTCAATGCTGGAGCTGGTTTTTGCGCCCGCCAAGGACTGGATCGG
CAGGCCCGATGAGGAGATCATCGCGGCCACCATGAAGGAGCTGGAGATCC
TGTTCCCCAACGAGATCAGCGCGGACGGAAGCAAGGCCAAGCTGCTCAAG
TCGCACGTCGTCAAGACCCCCCTGTCCGTGTACGAGGCGACCCCCGGAAG
GGAGGACTTCAGGCCGGTCCAGACGTCCCCCATCAACAACTTCTTCCTCG
CGGGCTGCTTCACCAAGCAGAAGTACCTGGCCTCCATGGAGGGTGCCACA
TTCAGTGGCAAGCTATGCGCACAGGCGATCGCTGAGGCCGCTGTTGCGGG
CAGAGTCAAGGCACGCGCGCCAGAGCCTGCCGCCGCCGTTGTCGCATAA
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