mRNA_3449 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347963
Unique NamemRNA_3449
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A836CJ55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ55_9STRA)

HSP 1 Score: 1451 bits (3757), Expect = 0.000e+0
Identity = 1114/1114 (100.00%), Postives = 1114/1114 (100.00%), Query Frame = 1 
Query:    1 MQLDREERLRTAGPKFGLLLAKRMMTAEARLHKQVETAVVRAALADLPASLRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGGCAHLQSLNLGLTALAAGCPRLRFLSLEGCLGAGDAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDAVGRDLVAPARAFFGYAPRADLAAAKLRAARAAVRDAAARRLAYAAHXXXXXXXEARERRRCGAAAVRLQAAFRAHAXXXXAAALRCQRAALLAKGRHXXXXXXXXXXXXXXXGPQARAVAAAVAALRHERRVELRSAAAVHLGAAVRSWLARRRCGAWAEVKRQRDRDRGAAARCLQQAGRAFIARARLRRLREEAARRAALEAAAATRIQGLCLGEMLRRQRVQRLHAMHRGALAMQSLARGSRGRAAXXXXXXXXXXXXXXXTAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDDXXXXXXXXXXXXXXXXXXXXXXXARGAAVWRSAATGATAAARPHAFEEARRTRAPWARTGAAARXXXXXXXXXXXXGRHRIDYDDGEHEWMALGAEADRVLLCIGXXXXXXXXXXXXXXXAWVRYRDYAAHVPPEAAAARAQADALRQRRQRNAALLEREARWEKSWQPDIEAARWLDPDTGEVLIAAADADGWRLEEDPASAQLFYVNAATGAAVAEGEGVPDPRFARPSDKARALREQDAALAELRWGAYVCADLAARCAGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVTPADTTRETRRVRELLERLRDGRDVTRLAAAVAAARRAFPAVHELEASAEFGAAVATLRHAMELQEWGGAELRAMLDAKRAWMTGGDGLALGMSALRPAAXXXXXXXXXXXSSAPRCAPGALGLQI 3342
            MQLDREERLRTAGPKFGLLLAKRMMTAEARLHKQVETAVVRAALADLPASLRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGGCAHLQSLNLGLTALAAGCPRLRFLSLEGCLGAGDAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDAVGRDLVAPARAFFGYAPRADLAAAKLRAARAAVRDAAARRLAYAAHXXXXXXXEARERRRCGAAAVRLQAAFRAHAXXXXAAALRCQRAALLAKGRHXXXXXXXXXXXXXXXGPQARAVAAAVAALRHERRVELRSAAAVHLGAAVRSWLARRRCGAWAEVKRQRDRDRGAAARCLQQAGRAFIARARLRRLREEAARRAALEAAAATRIQGLCLGEMLRRQRVQRLHAMHRGALAMQSLARGSRGRAAXXXXXXXXXXXXXXXTAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDDXXXXXXXXXXXXXXXXXXXXXXXARGAAVWRSAATGATAAARPHAFEEARRTRAPWARTGAAARXXXXXXXXXXXXGRHRIDYDDGEHEWMALGAEADRVLLCIGXXXXXXXXXXXXXXXAWVRYRDYAAHVPPEAAAARAQADALRQRRQRNAALLEREARWEKSWQPDIEAARWLDPDTGEVLIAAADADGWRLEEDPASAQLFYVNAATGAAVAEGEGVPDPRFARPSDKARALREQDAALAELRWGAYVCADLAARCAGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVTPADTTRETRRVRELLERLRDGRDVTRLAAAVAAARRAFPAVHELEASAEFGAAVATLRHAMELQEWGGAELRAMLDAKRAWMTGGDGLALGMSALRPAAXXXXXXXXXXXSSAPRCAPGALGLQI
Sbjct:    1 MQLDREERLRTAGPKFGLLLAKRMMTAEARLHKQVETAVVRAALADLPASLRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGGCAHLQSLNLGLTALAAGCPRLRFLSLEGCLGAGDAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDAVGRDLVAPARAFFGYAPRADLAAAKLRAARAAVRDAAARRLAYAAHXXXXXXXEARERRRCGAAAVRLQAAFRAHAXXXXAAALRCQRAALLAKGRHXXXXXXXXXXXXXXXGPQARAVAAAVAALRHERRVELRSAAAVHLGAAVRSWLARRRCGAWAEVKRQRDRDRGAAARCLQQAGRAFIARARLRRLREEAARRAALEAAAATRIQGLCLGEMLRRQRVQRLHAMHRGALAMQSLARGSRGRAAXXXXXXXXXXXXXXXTAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDDXXXXXXXXXXXXXXXXXXXXXXXARGAAVWRSAATGATAAARPHAFEEARRTRAPWARTGAAARXXXXXXXXXXXXGRHRIDYDDGEHEWMALGAEADRVLLCIGXXXXXXXXXXXXXXXAWVRYRDYAAHVPPEAAAARAQADALRQRRQRNAALLEREARWEKSWQPDIEAARWLDPDTGEVLIAAADADGWRLEEDPASAQLFYVNAATGAAVAEGEGVPDPRFARPSDKARALREQDAALAELRWGAYVCADLAARCAGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVTPADTTRETRRVRELLERLRDGRDVTRLAAAVAAARRAFPAVHELEASAEFGAAVATLRHAMELQEWGGAELRAMLDAKRAWMTGGDGLALGMSALRPAAXXXXXXXXXXXSSAPRCAPGALGLQI 1114
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A7S4EA95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EA95_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.690e-15
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1 
Query:  163 EFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGG-CAHLQSLNL 585
            +F+    + +++G  W   +      S  L+GW+G+    LR+L+L  G SL   DLS+T + D  ++  CARLFA+RTL++  C  VTN     +S+     LT LDVS C  +NS+   W+GG +G G   C  L SL++
Sbjct:  112 QFLEGTSDNIKDGCAWTYPKPATRGKSVTLAGWKGLRLEPLRALSLALGDSLTAADLSQTSLTDNDVQAFCARLFALRTLKMRDCENVTNQSCMKISQCIHECLTQLDVSGCTQLNSDACGWLGGIVGVGAAKCHKLLSLDI 253
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A7S4A0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0T5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.780e-15
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1 
Query:  163 EFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGG-CAHLQSLNL 585
            +F+    + +++G  W   +      S  L+GW+G+    LR+L+L  G SL   DLS+T + D  ++  CARLFA+RTL++  C  VTN     +S+     LT LDVS C  +NS+   W+GG +G G   C  L SL++
Sbjct:  112 QFLEGTSDNIKDGCAWTYPKPATRGKSVTLAGWKGLRLEPLRALSLALGDSLTAADLSQTSLTDNDVQAFCARLFALRTLKMRDCENVTNQSCMKISQCIHECLTQLDVSGCTQLNSDACGWLGGIVGVGAAKCHKLLSLDI 253
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BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A482RS68_9ARCH (WW domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RS68_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 1.490e-10
Identity = 59/186 (31.72%), Postives = 92/186 (49.46%), Query Frame = 1 
Query:  115 VVRAALADLPASLRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIG-FGGGCAHLQSLNLG--------LTALAAGCPRLRFLSLEGC 645
            +VR AL     ++  L+     + +L + EL     +     +  L+ W  +S+  LR +++ +GASL+ +D S + V    L+V+  R F +R LRL    TV     R + +L    L  L ++ C  + ++ LAW+GG  G      A L  L+LG        L A+A GC RLRFL+LE C
Sbjct:   47 IVRDALEAYATTVGPLDASNV-LNDLSDDELCVFFSQYPHIETLILTRWLKLSANVLRCISITSGASLQELDFSNSKVQHQHLQVILVRTFNLRVLRLTGSDTVDTQCARIIVQLSSENLRELYLNKCEKVGNDALAWLGGGAGVLVQSLARLTCLDLGDCNISDAGLLAVARGCKRLRFLNLENC 231
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: G4YTH9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTH9_PHYSP)

HSP 1 Score: 76.3 bits (186), Expect = 3.270e-10
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 1 
Query:  250 LSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGG---CAHLQSLNL---------GLTALAAGCPRLRFLSLEG 642
            LSG +G +   LRSL    G +L  +D SRT ++   L+VL   +  +  L  ++C  + + G+R     C  +LT L++S C  +  + L W+GGA+G  G    C  L SL++         GL AL AGC  L+FL+LEG
Sbjct:   56 LSGCKGFTPVGLRSLVHAVGENLRQLDCSRTTLSVPMLQVLATGIERLDVLDFSSCPQLLSEGVREFISCCNTSLTRLNLSRCGALTDDALGWVGGALGPQGSRTRCHRLLSLDVSFTVAICDRGLAALGAGCQALQFLNLEG 198
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A7S3HAT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAT1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.830e-10
Identity = 124/467 (26.55%), Postives = 178/467 (38.12%), Query Frame = 1 
Query: 1387 RRVELRSAAAVHLGAAVRSWLARRRCGAWAEVKRQRDRDRGAAARCLQQAGRAFIARARLRRLREEAARRAALEAAAATRIQGLCLGEMLR---RQRVQRLHAMHRG----ALAMQSLARGSRGRAAXXXXXXXXXXXXXXXTAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDDXXXXXXXXXXXXXXXXXXXXXXXARGAAVWRSAATGATAAARPH---AFEEA---RRTRAPWARTGAAARXXXXXXXXXXXXGRHRIDYDDGEHEWMALGAEADRVLLCIGXXXXXXXXXXXXXXXAWVRYRDYAAHVPPEAAAARAQADALRQRRQRNAALLEREARWEKSWQPDIE-AARWLDPDTGEVLIAAADADGWRLEEDPASAQLFYVNAATGAAVAEGEGVPDPRFARPSDKARALREQDAALAELRWGAYVCADL 2745
            RR+E  +A AV L A +R  LA     +W E+  +RDR+   A   +QQ  R F++  R+ +LR +     A    AA +I+  C+  M R   R     L    R     A+ +Q + RG   R                   IQR++R +RVL WRD+R+N +   VL R  +E     A    R ++ I++   D+  +                        AR    W++ AT       P    A E+     R +  W                     RHR++YDDG+HEW+ L  E DRV +                   W  Y  Y +         R   DA R +            +W +S+  DI     +L   TGE+     DA  W +++D      FY N  TGA V E     DPRF    D   A + +   + ELR   Y C DL
Sbjct:  237 RRLEALNAVAVVLQAQMRRHLASHLVSSWTELCHRRDRNVHDAILVMQQLARRFVSTLRMDKLRLQRDNFNAARRTAAKKIKTFCVEGMARYKARLTGDALKKFFREKWTMAIVIQKMFRGFCARERVRKIKIQLALFNYAARDIQRIYRGTRVLHWRDMRLNVIAAFVLDRHYVERKSSIAATRLRYKQFILDNQRDSASE--------PDDEEIAEEWLKTYDSARRCYYWQNFATNVITYDEPEEELAHEKNLVNTRIKVYWVVQDCW--YGGIITKYHRRKRRHRVEYDDGDHEWINLQDECDRVQV-------------QHEDGLWSMYTMYQSEAMQNEHRKR---DAKRDKENYQQQAFRDANQW-RSFLDDISHEVMFLSQITGEIRAGLPDALSWVVQDDGIGFPCFY-NMETGAIVYE-----DPRFIYEVDDDLAAQRRYV-MQELRIAVYFCQDL 669
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A6H5JAN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN1_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.730e-9
Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 1 
Query: 1642 LGEMLRRQRVQRLHAMHRGALAMQSLARGSRGRAAXXXXXXXXXXXXXXXTAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDD 1974
            +G  ++ Q  +   A HR A+ +Q+  RG RGR                   IQ+VFR SRV+ WRDVR+N+V  HV  RQE+E+ ER      R +  + EA  D+C +D
Sbjct:    1 MGAQVKSQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHQEWKKNSRAARKIQKVFRGSRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSED 111
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A2P4YL83_9STRA (Putative leucine rich repeat calmodulin binding protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YL83_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.770e-9
Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 1 
Query:  250 LSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGG---CAHLQSLNL---------GLTALAAGCPRLRFLSLEG 642
            LSG  G +   LRSLA   G +L  +D S T ++   L+VL   +  +  L  ++C  + + G+R     C  +LT L++S C  +  + L WIGGA+G  G    C  L SL++         GL AL AGC  L+FL+LEG
Sbjct:   56 LSGCNGFTPVGLRSLAHVVGETLRQLDCSFTMLSVPMLQVLATGIERLDILDFSSCPRLLSEGVREFISCCNTSLTRLNLSRCGALTDDALGWIGGALGPMGSRTRCRRLLSLDVSYTGAICDRGLAALGAGCHALQFLNLEG 198
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A7S2FB32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FB32_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.630e-8
Identity = 83/275 (30.18%), Postives = 112/275 (40.73%), Query Frame = 1 
Query: 1792 TAIQRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEANHDACDDDXXXXXXXXXXXXXXXXXXXXXXXARGAAVWRSAATGATAAARPHA---FEEA---RRTRAPWART-----GAAARXXXXXXXXXXXXGRHRIDYDDGEHEWMALGAEADRVLLCI-----------------GXXXXXXXXXXXXXXXAWVRYRDYAAHVPPEAAAARAQADALRQRRQRNAALLEREARWEKSWQ-PDIE-AARWLDPDTGEV 2526
            TAIQR++R SRV+  + ++MN+V   + RR+ELE  E A L A+R+      A  D+  D                        A G   W   A+G +    P +   FEEA   R  +  W +      G AA              RHRIDY+DG+HEW+ L AEA+RV + +                                 AWV Y  +    PP   A R  +     RR+ N   LERE  W +  Q P+ E A RW +  TGEV
Sbjct:   27 TAIQRMWRGSRVMPAKHIKMNQVAAFIFRREELEMREAATLLAKRERAHKETAAKDSASDSDEEEDPLDVWEEIWDED------APGGIRWFCEASGESLIEPPVSRWEFEEALLGRSLKIYWPQEDKWFPGTAAHLRKSKR-------RHRIDYEDGDHEWIELDAEAERVQVWLTAQEVKDTSARDDADEGALELYDDGYQRGGGGGAWVMYGVF---CPPSLRARREASHRRAGRRKANRKWLEREEGWTELGQDPNREDAMRWANEKTGEV 285
[Close]
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Match: A0A225WX17_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WX17_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.590e-7
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1 
Query:  283 LRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEGLAWIGGAIGFGGG---CAHLQSLNL---------GLTALAAGCPRLRFLSLEG 642
            LRSL    G +L  +D S T ++ + L+VL   +  + TL  ++C  + + G+R     C  +LT L++S C  +  + L WIGG++G  G    C  L SL++         GL AL  GC  L+FL+LEG
Sbjct:   67 LRSLVHVVGETLRHLDCSCTILSVSMLQVLATGIEHLDTLDFSSCSQLLSEGVREFISCCNTSLTRLNLSRCGALTDDALGWIGGSLGPQGSRTRCRRLISLDISYTAAICDRGLAALGEGCHALQFLNLEG 198
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347963 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A836CJ55_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4EA95_9STRA1.690e-1536.62Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0T5_9STRA1.780e-1536.62Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482RS68_9ARCH1.490e-1031.72WW domain-containing protein n=1 Tax=archaeon TaxI... [more]
G4YTH9_PHYSP3.270e-1035.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A7S3HAT1_9STRA6.830e-1026.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6H5JAN1_9PHAE1.730e-936.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4YL83_9STRA3.770e-936.36Putative leucine rich repeat calmodulin binding pr... [more]
A0A7S2FB32_9STRA1.630e-830.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A225WX17_9STRA6.590e-734.85Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:1053913..1064920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347963|estExt_Genemark1.C_Ctg_170136
GOsGO:0007154,GO:0007267,GO:0008150,GO:0009987,GO:0023052,GO:0030154,GO:0032502,GO:0045165,GO:0045168,GO:0046331,GO:0048869
Preferred nameC2orf69
Descriptionmodulation by host of viral RNA genome replication
COG categoryKLT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2800@1|root,KOG4341@1|root,KOG2800@2759|Eukaryota,KOG4341@2759|Eukaryota
Evalue8.82e-34
Seed ortholog2880.D7FGX1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical leucine rich repeat calmodulin binding protein
Ec32 orthologEc-11_000955.1
TranscriptId348285
TrackFilteredModels1
ProteinId347963
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347963gene_3449Tribonema minus UTEX_B_3156 geneContig_17 1053913..1064920 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3449_13exon_3449_13Tribonema minus UTEX_B_3156 exonContig_17 1053913..1054220 -
exon_3449_12exon_3449_12Tribonema minus UTEX_B_3156 exonContig_17 1055293..1055984 -
exon_3449_11exon_3449_11Tribonema minus UTEX_B_3156 exonContig_17 1056274..1056692 -
exon_3449_10exon_3449_10Tribonema minus UTEX_B_3156 exonContig_17 1056736..1056895 -
exon_3449_9exon_3449_9Tribonema minus UTEX_B_3156 exonContig_17 1057378..1057702 -
exon_3449_8exon_3449_8Tribonema minus UTEX_B_3156 exonContig_17 1058636..1058788 -
exon_3449_7exon_3449_7Tribonema minus UTEX_B_3156 exonContig_17 1059855..1060016 -
exon_3449_6exon_3449_6Tribonema minus UTEX_B_3156 exonContig_17 1060510..1060707 -
exon_3449_5exon_3449_5Tribonema minus UTEX_B_3156 exonContig_17 1060805..1061050 -
exon_3449_4exon_3449_4Tribonema minus UTEX_B_3156 exonContig_17 1061849..1062137 -
exon_3449_3exon_3449_3Tribonema minus UTEX_B_3156 exonContig_17 1063209..1063280 -
exon_3449_2exon_3449_2Tribonema minus UTEX_B_3156 exonContig_17 1063887..1064149 -
exon_3449_1exon_3449_1Tribonema minus UTEX_B_3156 exonContig_17 1064672..1064920 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3449UTR3_3449Tribonema minus UTEX_B_3156 three_prime_UTRContig_17 1053913..1054103 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3449CDS_3449Tribonema minus UTEX_B_3156 CDSContig_17 1064672..1064920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347963Trimin1|347963|estExt_Genemark1.C_Ctg_170136Tribonema minus UTEX_B_3156 polypeptideContig_17 1054104..1064920 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3449 ID=mRNA_3449|Name=jgi.p|Trimin1|347963|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3536bp|location=Sequence derived from alignment at Contig_17:1053913..1064920- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCTGGACCGGGAGGAGCGCCTTCGCACGGCTGGACCCAAATTTGG
TCTGCTGCTGGCGAAGCGGATGATGACTGCAGAAGCACGCCTTCACAAGC
AGGTGGAAACAGCAGTGGTCAGGGCAGCCCTGGCGGATTTGCCTGCCTCC
CTTCGAGACCTGGAATTCGTAGGTACAGGCATGGAGGAGCTTCGTGAGGG
CGAGCTGTGGGAGGTGCTGAGAAAAGGCCACATATTCGTGTCCGCCAATC
TCTCCGGGTGGCGCGGCATCAGCAGCGGCGCGCTGCGCAGTCTCGCGCTC
AACACGGGCGCGAGCCTCGAGACCGTCGACCTGAGCCGCACCGGCGTCGC
CGACGCGCAGCTCGAGGTCCTGTGCGCGCGCCTGTTTGCCATCAGGACGC
TGCGCCTCGCCGCGTGCCGCACGGTGACGAACCTCGGCCTGCGCGCCGTC
TCGGAGCTGTGCGGCGCGACGCTGACGGCGCTGGACGTGTCCGCGTGCGC
GGGGATCAACAGTGAGGGACTGGCGTGGATAGGGGGGGCTATTGGATTCG
GGGGCGGCTGCGCGCACCTACAGAGCCTCAACCTGGGGCTAACGGCCCTC
GCAGCGGGCTGCCCGCGCCTGCGCTTCCTCTCCCTAGAGGGCTGCCTGGG
GGCGGGCGACGCCGGCGTCGGCGCCGTGGCGCGCGCGTGCTCGCGCATGG
CGGTGCTCAACCTCCACGAGTGCCCGGCGCTCAGCGGCCGCGCCATCGAG
GACATTGGCTGCCACTGCGCGCGCCTGGCGAGCCTGAACGTCGGGCGCAA
CGGAAATGTAACCGACGCGGGACTGAAGGCGCTCGCTCGCGGCTGCCCGC
ACCTGGCATTCCTGAACGTCGCGGGCTCGCGCGCGATCTCCGAGGCGGGC
CTCTGCCCGCTCGTCACGCGGTGCCGCGGCCTCTACACGCTTAACCTCAC
CGGCTGCGCGCGCGTCACCGACGACGGCCTCGCCGCGCTCGTCGACGCCG
TAGGGCGCGACCTCGTGGCGCCCGCGCGCGCGTTCTTCGGCTACGCGCCG
CGCGCGGACCTCGCCGCCGCCAAGCTGCGCGCCGCGCGCGCGGCCGTCCG
CGACGCCGCCGCGCGCCGCCTCGCATACGCGGCGCACCGGCGGCGGCGGC
GGCGCCGCGAGGCGCGCGAGCGGCGGCGCTGCGGCGCCGCGGCGGTGCGG
CTGCAGGCGGCGTTCCGCGCGCACGCCGCACGGCGGCGGGCGGCGGCGCT
GCGCTGCCAGCGCGCCGCGCTGCTGGCGAAGGGGCGGCACGCCGTTCCCA
TCCAGGCGGTCTTCAAGGGGCATCTGGCGCGGCGCGGACCGCAGGCGCGC
GCCGTCGCGGCCGCCGTCGCCGCGCTGCGGCACGAGCGGCGCGTCGAGCT
GCGCTCAGCCGCGGCGGTGCACCTCGGCGCTGCCGTGCGCTCGTGGCTGG
CGCGGCGGCGCTGCGGCGCGTGGGCGGAGGTCAAGCGCCAGCGCGACCGC
GATAGGGGCGCCGCCGCGCGCTGCCTGCAGCAGGCCGGCCGCGCCTTCAT
CGCGCGCGCACGGCTCAGGCGGCTGCGCGAGGAGGCCGCGCGGCGCGCCG
CACTTGAAGCCGCCGCGGCCACGCGCATACAGGGACTGTGCCTCGGCGAG
ATGCTGCGGCGGCAGCGGGTGCAGCGGCTGCACGCCATGCACCGCGGCGC
GCTCGCGATGCAGTCGCTGGCGCGCGGCTCGCGCGGCCGCGCCGCGGCGC
GGCGGCGCCGCCGCGCCGCCGCCGCCGCCGCAGCCGCTGCCACCGCCATA
CAGCGCGTCTTCCGCAGCAGCAGGGTGCTGGGGTGGCGCGATGTGCGCAT
GAACAGGGTCACGCTGCACGTGCTGCGGCGGCAGGAGCTGGAGTACGCGG
AGCGCGCGGCGCTGGCGGCGCGGCGCGACGAGCGGCGCATCATGGAGGCC
AACCACGACGCGTGCGACGACGACTACGACGAGGACGCGGAGGCAGCGCT
CAACGCCGCCGCCGACGCCGCGTGGGAGGAGGTCTGGGACGAGGCGCGTG
GCGCCGCCGTCTGGCGCAGCGCGGCGACCGGCGCCACCGCCGCGGCGCGC
CCGCACGCCTTCGAGGAGGCGCGTCGTACGAGGGCGCCGTGGGCGCGTAC
CGGCGCCGCGGCGCGCGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGG
CGGGGCGGCACCGTATCGACTACGACGACGGCGAGCATGAGTGGATGGCG
CTGGGCGCGGAGGCCGATCGCGTGCTGCTGTGCATCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGCGTGGGTGCGGTACC
GCGACTACGCGGCGCACGTGCCGCCGGAGGCGGCGGCGGCGCGCGCGCAG
GCGGACGCGCTGCGGCAGCGGCGGCAGCGCAATGCGGCGCTGCTGGAGCG
CGAGGCGCGGTGGGAGAAGTCGTGGCAGCCCGATATAGAGGCGGCGCGGT
GGCTGGACCCTGATACCGGCGAGGTGCTCATTGCAGCCGCCGACGCCGAC
GGCTGGCGCCTCGAGGAGGACCCCGCCAGCGCTCAGCTCTTCTACGTCAA
CGCCGCCACCGGCGCGGCGGTCGCGGAGGGCGAGGGCGTGCCAGACCCGC
GGTTCGCGCGCCCTTCCGACAAGGCGCGCGCGCTGCGGGAGCAGGACGCC
GCCCTCGCGGAGCTGCGCTGGGGCGCGTACGTGTGCGCGGACCTCGCGGC
GCGCTGCGCGGGCGTCGCCGCCGCGCCCGCCGCCGCCGCGCTGCTGCAGC
GGCCGCCGCCGCCGCCCACCGCCGCGGGCAGCAACGCGGGCGCTGAAGAT
GGCACGGCTGCCGCACTGGACAGCAGCGGCGGCGGCGCTGGCGCGCTGCA
GCTGGCCGCTGGCGGCGGCGGCGAAAGCGGCGGCGGCGGCGGCGGCAGCA
GCAGCGCGGGCGTGACGCCCGCAGATACAACACGCGAGACGCGGCGCGTG
CGCGAGCTGCTGGAGCGGCTGCGCGACGGGCGCGACGTCACGCGCCTCGC
CGCGGCCGTCGCCGCCGCGCGCCGCGCGTTCCCCGCGGTACATGAGCTCG
AGGCGAGCGCCGAGTTCGGCGCCGCCGTCGCGACGCTGCGCCACGCCATG
GAGCTGCAGGAGTGGGGCGGCGCGGAGCTGCGCGCGATGCTCGACGCGAA
GCGCGCGTGGATGACGGGGGGGGATGGCTTGGCACTCGGCATGAGCGCGC
TGCGCCCGGCGGCGGCGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGC
AGTGCCCCCCGCTGCGCGCCCGGCGCATTGGGTCTCCAGATCTGATCACT
GCTGCGCCCATGTGCGCAGCTGCTCGACCGCAGCGACCCCCCCCCCCTTC
ACGCTCCCACCTACACCTCCCACGAGAGCCAATTGAGCAGCTTCGGCAGG
AAAGGATTCCCTCCTTGGGCGGAAGAGACATTGGACTCAACAACACAGTC
CGTCCCCATTTCCCCCTAGGCAAGCCCCCCTTCCGC
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protein sequence of jgi.p|Trimin1|347963

>Trimin1|347963|estExt_Genemark1.C_Ctg_170136 ID=Trimin1|347963|estExt_Genemark1.C_Ctg_170136|Name=jgi.p|Trimin1|347963|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1115bp
MQLDREERLRTAGPKFGLLLAKRMMTAEARLHKQVETAVVRAALADLPAS
LRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLAL
NTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAV
SELCGATLTALDVSACAGINSEGLAWIGGAIGFGGGCAHLQSLNLGLTAL
AAGCPRLRFLSLEGCLGAGDAGVGAVARACSRMAVLNLHECPALSGRAIE
DIGCHCARLASLNVGRNGNVTDAGLKALARGCPHLAFLNVAGSRAISEAG
LCPLVTRCRGLYTLNLTGCARVTDDGLAALVDAVGRDLVAPARAFFGYAP
RADLAAAKLRAARAAVRDAAARRLAYAAHRRRRRRREARERRRCGAAAVR
LQAAFRAHAARRRAAALRCQRAALLAKGRHAVPIQAVFKGHLARRGPQAR
AVAAAVAALRHERRVELRSAAAVHLGAAVRSWLARRRCGAWAEVKRQRDR
DRGAAARCLQQAGRAFIARARLRRLREEAARRAALEAAAATRIQGLCLGE
MLRRQRVQRLHAMHRGALAMQSLARGSRGRAAARRRRRAAAAAAAAATAI
QRVFRSSRVLGWRDVRMNRVTLHVLRRQELEYAERAALAARRDERRIMEA
NHDACDDDYDEDAEAALNAAADAAWEEVWDEARGAAVWRSAATGATAAAR
PHAFEEARRTRAPWARTGAAARAAAAAAAAAAAAGRHRIDYDDGEHEWMA
LGAEADRVLLCIGGGGGGGGGGGGGGGGAWVRYRDYAAHVPPEAAAARAQ
ADALRQRRQRNAALLEREARWEKSWQPDIEAARWLDPDTGEVLIAAADAD
GWRLEEDPASAQLFYVNAATGAAVAEGEGVPDPRFARPSDKARALREQDA
ALAELRWGAYVCADLAARCAGVAAAPAAAALLQRPPPPPTAAGSNAGAED
GTAAALDSSGGGAGALQLAAGGGGESGGGGGGSSSAGVTPADTTRETRRV
RELLERLRDGRDVTRLAAAVAAARRAFPAVHELEASAEFGAAVATLRHAM
ELQEWGGAELRAMLDAKRAWMTGGDGLALGMSALRPAAAALLLLLLLLLS
SAPRCAPGALGLQI*
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mRNA from alignment at Contig_17:1053913..1064920-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3449 ID=mRNA_3449|Name=jgi.p|Trimin1|347963|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11008bp|location=Sequence derived from alignment at Contig_17:1053913..1064920- (Tribonema minus UTEX_B_3156 )
ATGCAGCTGGACCGGGAGGAGCGCCTTCGCACGGCTGGACCCAAATTTGG
TCTGCTGCTGGCGAAGCGGATGATGACTGCAGAAGCACGCCTTCACAAGC
AGGTGGAAACAGCAGTGGTCAGGGCAGCCCTGGCGGATTTGCCTGCCTCC
CTTCGAGACCTGGAATTCGTAGGTACAGGCATGGAGGAGCTTCGTGAGGG
CGAGCTGTGGGAGGTGCTGAGAAAAGGCCACATATTCGTGTCCGCCAATG
TGAGTTTTTGAGTGATGCATGAACGCACTCAGCCTTGATGCCAATAAGCT
GCACAGATCTGCAGACCTGTCTGCTGCTCACACCACACCAGAATTTTACT
CCTGACAATTTCAGCAGCCAATTCGACGATGAGCAAGAATATGCCATGCA
TGGACTGCTACAACCTCAGGTGTGTTGGCATCTAGGCCGCTCTGCTTTAC
CGCTCTGGTGCAGTTGTCAATTCTCACAGGACTCTCTCCTGAGCTGCTTG
TACAATCATCCTGGCCATGTGTGACATCTGCCAGGGATGCATTTATGAGT
GCCATATTCGCACACCGCTTTCTGAACCGGTTTGGAGACATTCACATGCT
CTTGGGCTCAATTTACCCCGGCCTGCATTGCCCCCATGTCATCGTCCCAC
TTAGCGACACTGATGCAGCGACACACAAAACCCACGCAAACCAGTCCCCT
CACGCATTCGCCAGCCCCTTCAATCATCTACTGCGCTCCCATCAGCACAC
ACACACTGCGCCCCTGCGCAGCTCTCCGGGTGGCGCGGCATCAGCAGCGG
CGCGCTGCGCAGTCTCGCGCTCAACACGGGCGCGAGCCTCGAGACCGTCG
ACCTGAGCCGCACCGGCGTCGCCGACGCGCAGCTCGAGGTCCTGTGCGCG
CGCCTGTTTGCCATCAGGACGCTGCGCCTCGCCGCGTGCCGCACGGTGAC
GAACCTCGGCCTGCGCGCCGTCTCGGAGCTGTGCGGCGCGACGCTGACGG
CGCTGGACGTGTCCGCGTGCGCGGGGATCAACAGGTGAGGCGTCAGCGCT
CAGGGGTTGAGTCGCAGTTGCGCGCGGCCGTCGAGGGCGCGCTTGCGCGG
CGGTCCTTGAAGTTTACTGCTTGGCGGTGCGGCGCTGAAGGTGGAGCGCC
CTCTGCGCTTGCTTCCAGCTGCATAACCGAGAATTGGAACCAGATGGCCG
TTATTTGCGGTTGCTGAAGGATTTGAATGCCGGGCGCTGAGGCCAACAGT
TCTGCCTGCGGCTGGCGCACACATGGCACCTCACTCTCACAGCCCTGTGG
CGCGGGCTTGACACATGCGGGCACATTGCGCCTGGCTAAGCTGCCGCGCA
CCTCAGCGCGTATGCATTGCGTGCCTTCACAGCTACCAAATGCTCCTCTT
TTCTGTCAAGTCACTGCTGTCAAGTCGTCAGTCTCTGACTGCTGAAAGTG
GCGCTTTTTCTGCAACTGTGCTGTGCAGAAGCCCACACGCCGATGTAGTG
CCAGGTTGCCTGCGCTTGTTGACACGCCGTTGCCTTTCGTGCCAAGCTCG
CCTCTTTGCGATATGCCTGTGAGTGTAAACACGTCACTGTTTATGCAAAC
TCGGCCTTGAATGCGGTGCCCCCTATGCTTTGTTCCACAGTGAGGGACTG
GCGTGGATAGGGGGGGCTATTGGATTCGGGGGCGGCTGCGCGCACCTACA
GAGCCTCAACCTGTCGCACTGTGCATCTGTCGGTGACAGGCGAGTAATTC
AACTTCAATAAGCGTGTAACTGCACATCGATGCTCATACAGCATTCTTCG
AGTTTCATGTACACTGATTACATCTCTGGATGCATGCTGATATTTGCAAC
ATTATATATGATTCTCGAGGTGTACTTTGAGCCACATCATCTTGGCAGCT
GCACGCATCTTCAGAGCCTCAATGTGTCCCGCAATGCATCTGTCGGCAAC
AGGCGAGTGCCTCGACCCTGACTGCGACCAGCACTGCACACATTGGTTTT
TGCAGCATCAAGTGGTTGAAGAACAAATGTATGCTGACTGAGTATCTGAC
CATATCTGCCGCATAACACTGCGACATTTCAATACACATGCTTGATAGTG
GCTGCATTGTCCATGCGGCAACGCTGCAACAGCATTGGAATGCAGACATG
CGCACCGTCGCCACCCGCCCCCTTCTGCACGGCGCAACCAACATCACCGT
CGCACGCCCTCTGCATCGCATCACCACATTGCCTCCGCCAGCCACACCAG
CGTGCTTGCACCACAAGTACGCATCATGCCACGTTCTGGAAACATACCCT
ACCCCCCCCCCCCCCCCCCCCCTGTCTACCTACTCGGCCCTCACATCCCC
CCCCTCCCCCGCGCTAACACCCTCAGGGGGCTCACATCACCATGTGGGTG
TTGCAAGCAAAATCGACAGCGGTCGCTGCTGCATAAGCAGGCATACCTGT
GGGGAAGGCAGCTGCTGCATAAGCAGGCACCCACACACAGCAGACCGCGC
ACAATATATCATACATGCTTCGCAAAAACGAATGTCTGATCCTCTTGATT
CCGAGTCTCGTTGCCAATTTGTGGCGCCTATGTCGCTTGCTTGATGTCGC
TTGCTGGTTTGAAGGCGTGTTGCAATCTTCACCATGCACTGCGGGCTCTT
GAGGCGCGTGAGCTCCGCGTAGCGCGCTGCGCGCTGTATGAACAGCATGC
CGCTGTCGACGTTCAGCTCGCTGCCGGGCCCCGCCGTGTTGCCCTCACAT
CCTCTCCCCCCTCTCCCATGCTGACGCCCTCAGGGGGCTAACGGCCCTCG
CAGCGGGCTGCCCGCGCCTGCGCTTCCTCTCCCTAGAGGGCTGCCTGGGG
GCGGGCGACGCCGGCGTCGGCGCCGTGGCGCGCGCGTGCTCGCGCATGGC
GGTGCTCAACCTCCACGAGTGCCCGGCGCTCAGCGGCCGCGCCATCGAGG
ACATTGGCTGCCACTGCGCGCGCCTGGCGAGCCTGAACGTCGGGCGCAAC
GGAAATGTAACCGACGCGGGACTGAAGGCGCTCGCTCGCGGCTGCCCGCA
CCTGGCATTCCTGAACGTCGCGGTGCGTGCATTTAGGGTTCTGGATTAGG
GTTAGGGCTAGGGTTCAAGGTTAGGGTTTGGGTTAGGGTTGTCGTGAGGG
TGAGGACTTGGGTTAGAATTAGCGTTAGATCAGCTTTAGGACTACTGTGC
CTCTGCTGCGGTCCGGCCGTTGCGCTCGCCCCCCCCCCCCTCCCCACCCA
ACGGTGCGGTGGCAGACAATGTGTTGAGGCACCGCAGAGGCCCTGCATCT
TTTGTTGATGTTACCAATTTGTGTGCGATGTCGGCGCTGGATTTGACGGC
AGCGCAAGCGGTGCGCACCTGCGCATGCGCCCGTTACCACATGTGCGTAT
GATGACAATGAACTGACAGGTCCCCCACGCGCAGCTGTCTGCACAGTTGT
CTGCAGCCTCCCCTTGACATTGGAGTCCGCTGCATGAGAGAATAATATCG
GTGACCGCGCAGCGCTTTGTCAGGGCGAACGCGCGCCAAGACAGCCCGAG
CGCGCAGCGCTGCAGCGTTGGCGCTTCCGCGGCTCGCACAGATGAGCGTG
CCGCTGTCCATGCACCGAGCCACAGTCTGCAAATCCGACAGCGACTGGGG
ACGAAGACAACCAGACAGCGTTGACCAGCAGCACCACTGTCATTCCCTTT
GTTGTGCTGATACACCCGCGCCGACTGCAATACGCTCACGCCGCAAGCGC
CTTCCGCTCACAGCGCTCTCCACACAAGGCCGCGCGGACCTCGCCGCCCC
TCCCCTCGCGCCCCCCAACAACCCCCCCCGCACTCGCACCTTCCCCTCCC
CCCCGCGCCGCGCCGCTCAGGGCTCGCGCGCGATCTCCGAGGCGGGCCTC
TGCCCGCTCGTCACGCGGTGCCGCGGCCTCTACACGCTTAACCTCACCGG
CTGCGCGCGCGTCACCGACGACGGCCTCGCCGCGCTCGTCGACGCCGTAG
GGCGCGACCTCGTGGCGCCCGCGCGCGCGTTCTTCGGCTACGCGCCGCGC
GCGGACCTCGCCGCCGCCAAGCTGCGCGCCGCGCGCGCGGCCGTCCGCGA
CGCCGCCGCGCGCCGCGTGCAGGCGGCGTGGGCGCGCGCGCGCGCGCGCG
CGCGCGCGCGCGCTCGGCGCCGCCGCCGCCGCGCGCCGCGACGCCGCCGC
GCTCACCGTCCAGCTCGCATACGCGGCGCACCGGCGGCGGCGGCGGCGCC
GCGAGGCGCGCGAGCGGCGGCGCTGCGGCGCCGCGGCGGTGCGGCTGCAG
GCGGCGTTCCGCGCGCACGCCGCACGGCGGCGGGCGGCGGCGCTGCGCTG
CCAGCGCGCCGCGCTGCTGGCGAAGGGGCGGCACGCCGTTCCCATCCAGG
CGGTCTTCAAGGTGCGCACAGCGGCGGGGCGCTGTGCGCGCAAGTACGCG
CCTAAAAGCAGGGGGCATGGAAAGGGGGGGCGCAGCACGAACAGGACTGC
GACCGGGGCACTGTCGAAGTCGCAGCGATACCAGGACTCTTTCCATGCTG
CTCAGTGACGAAGGCCGCCGCGCTTTGTGGGTGCCATATGGTGTTGCGCG
TGCGGCATCGCATTTGGCGTTGTGTGCGCACTTTCAGCGCTTCACCGCCG
TGCGCAGTGAAGATCAGCCACCGCATCATCGCAGTGACGCCGCGGGCACT
GCGTGGCTGCTGCAGCAGCAGCGCCAATAGCAGCCTTGTTGCGGTGATTA
CAACGGCGCGTGCGTTATACTTCGAGGAAAGGTGTAGTACATTGCAGCTT
GATGATTATGAGCGTGCGCTCCTGGTCCCGCTCATTGCTGCCAGGTAGAC
GTACCACTACATACCCATTTTCACATATACACATACCTACCCTGCCTCTC
TCAGGGGCATCTGGCGCGGCGCGGACCGCAGGCGCGCGCCGTCGCGGCCG
CCGTCGCCGCGCTGCGGCACGAGCGGCGCGTCGAGCTGCGCTCAGCCGCG
GCGGTGCACCTCGGCGCTGCCGTGCGCTCGTGGCTGGCGCGGCGGCGCTG
CGGCGCGTGGGCGGAGGTGCGTCACACTTGAAGTTTTTTAGCATGCCGTT
TCCACAACTTCAGCTTGAGTGTACGCGTCACGTGAGGCCTCCTGTGCTGT
TGGGCACACATCGGCGGCAGTGCGGCGTTCTGCCGCCGCAGTGTGGTGAT
GGCGGCGGCGGCGCCTCGCGGCATCCGCGTGAGCGAGCAGCGGCCGCAAT
CATTTTTTCATTTTTCTGCAAGTGCATGGGTAAGTGGCGCTCGCTTAGAA
GGCGAGACTCATCGCGTAACTCCAAGGACACCGCTGTCAGCTTCATGTAC
AGCCTGACGTCAGCAGAACACATTGCCATCCTACATTTGGCGGCGGTCTT
GATGATGGCACAGCCACTGCATTGCCCCGTGCGGACGCGTCAACCAAGTC
AGCACGCCATCGCCGCCACGGCTATACCACAAGTTATAACGTCGTTGGGG
CACCACGCTTGCAGATTGCACCAGTGCACCAGCGAAGCCTGCAGGCGCAC
ACTAATAGACGATGAATGATTTCAATGCTGCACCCAGCATGAGCGCCTGA
CACGCAGTACGGCTGCAGGTGTTCCCCGCTCCATACTTGAAGTTAACGTT
GAGGTCTGTTTGAACCCTAGCCAGGTCAGCCCTTCACTGTAATGGGGGCA
CGGGAGTGGCGTCCCGCTGCCCGCAGCCGGGAACTGAGAGCGCTTCATCT
GCATGCGCGGCGCTGTTAAAAGATGCAGCTGAAACAGATGGCGGCCACCT
CAACATCTGCCGCGCCCACTGCCGACCTTGCCGCCGCACCGCCCCCTGCT
CTGTCGTCATCCCGCCCTGCTTGCAGTTTGTCATGTTGTCTCCCTTTGTT
CAAGCTAAGCTGTCGGCTTCCACCAACTGCCTCCGTCACCTTGCTCATCC
TAGTCCCATCCCATCGGCCGCCTGCGTGCCATCCCGAAGGTCAAGTGCCA
GCACGACCGCAACAAGGCTGTCAAGTTGTTTCCCTTTGTTCGAGACAAGC
TGTCGACATGCACCAACTGACCACTATCACCTTACTCATCCTATCCCCAT
CCCATCGCCCGCCTGCGCGCCACCTCTCGCAGGTCAAGCGCCAGCGCGAC
CGCGATAGGGGCGCCGCCGCGCGCTGCCTGCAGCAGGCCGGCCGCGCCTT
CATCGCGCGCGCACGGCTCAGGCGGCTGCGCGAGGAGGCCGCGCGGCGCG
CCGCACTTGAAGCCGCCGCGGCCACGCGCATACAGGTGACGCTCCCCGCC
TCCCCCTGTTCCCCCCCCCCTCCCCCCACCCCCGCCACCGGGCGGCTTCA
CGAGCACAGTGTGCAATTCAGTACGTGCCCCCCCCCCTTCCCCTCCCTGC
AACGGCCGGCTTCACGAGTACAAAGCGCGATCCTGCCCTGCAAGATGTTG
CTGATGCTAGCTTCAGCCGCGTGATGCAACCAGGGGTCCAATGTGTCATG
TGCGTTGAGAGGCGGACTGCTCAGAGGCGACGGCGCACAGCGCCTGGGGA
GAACTGCAGCCGTGTCGTGCGCAGAAAAGCACGTTCAGGTGACTTCCACG
ATGTCCAGGAGGACTGCGATGCTATGTTCCGACATTGCAGCATCCGTGCC
CTTGGGTGCTGGTGGAGCGACCCTTAAATTGTTTGTTCCATCGTTGCCGT
TGGTGGACGTTTATCCCTGTCGCCCAAATGTGCAGCTCACAGTGCAAACC
CCCCCTTACGTGCGGTGCAGCAGTCTGGCCCAGCAGCGCCTCCTTGCTAG
CCACCTAGCAATGCATGCTCAACGCTACCCCACACCCCAACTGACTGAAC
ACTGCAGTCACCCCCCAGCACCGCTCAGCAACAGTAGTCACCGACCCAGC
TGACCCCCTGCGCAGACGCACCATGCTGCTGCTCGCCTCACTCAACGAGG
CGCATTTGCAATGCGGCATTCGAGCCGCACCGCCGCAGCTCTCGCGCCCA
CAACTCGTGCTGCGCATCCGAAGGCGGCGCCGCGTGCTGCAGGCACTGCT
GCTGACGCGATGCCCGCGCCGCGATCCCAGCATCCCACGGCCTGTCGCTC
GCGCCAGCTCCGCAGCACGCCATGCCGCCGCCGCCGCAGGCATCGTCACT
AAAAACGCAATGCTGCCGCGCCTCCTCTCCCACAACTGTGTTTCCAGGCC
TTCGTGCGCCGCCACCAGGGACTGTGCCTCGGCGAGATGCTGCGGCGGCA
GCGGGTGCAGCGGCTGCACGCCATGCACCGCGGCGCGCTCGCGATGCAGT
CGCTGGCGCGCGGCTCGCGCGGCCGCGCCGCGGCGCGGCGGCGCCGCCGC
GCCGCCGCCGCCGCCGCAGCCGCTGCCACCGCCATACAGCGCGTCTTCCG
CAGCAGCAGGGTGCTGGGGTGGCGCGATGTGCGCATGAACAGGGTCACGC
TGCACGTGCTGCGGCGGCAGGAGCTGGAGTACGCGGAGCGCGCGGCGCTG
GCGGCGCGGCGCGACGAGCGGCGCATCATGGAGGCCAACCACGGTGAGCG
CGCGCGGCGCTTCCATTGGCAACTGCGCTTCGATTTGCAAGTGCTGTTGA
AGCGCTCAGCATGTGCTGGGTCGGTACGCGCATGCCGCATTGCTGGGTTT
AAAGCGAGTGAGTCGATGACACGGCGGTCGGGTGAGCGGCGGGATCACAG
AGGCCAGCCCCCGCCTGACCCAAACACTACCTTGTCACCTAGAGCTCAAC
GATCTTTTTGATTCGTTTTTCACTAACTTCAAGCGAAAGTATAGTGCACT
TGCCTGTGTACATGACGTGCACGCTGACTAGCTTCAAGCAGGACATTCGC
AGAGTGCGGCTGTGCATATCATGAGCCGCATAAGCGCCGTCAGCGCGTAG
GCACAGCGCACCATGCTCTAGCCCATACAAACACCACCCGCGTGGCGCGC
AGCCCGTAGCTCGACGTCTTAATCCCCATCACTGACTGCCACGTCGCTGC
GTGCCGCCACCGCCGCCGCGCGCAGACGCGTGCGACGACGACTACGACGA
GGACGCGGAGGCAGCGCTCAACGCCGCCGCCGACGCCGCGTGGGAGGAGG
TCTGGGACGAGGCGCGTGGCGCCGCCGTCTGGCGCAGCGCGGCGACCGGC
GCCACCGCCGCGGCGCGCCCGCACGCCTTCGAGGAGTCGCTCGTGGGGCT
GCGCGCGCGCGTCTACTGGCCGCAGCAGGGCGCGTCGTACGAGGGCGCCG
TGGGCGCGTACCGGCGCCGCGGCGCGCGCAGCGGCGGCAGCGGCGGCGGC
GGCGGCGGCGGCGGGGCGGCACCGTATCGACTACGACGACGGCGAGCATG
AGTGGATGGCGCTGGGCGCGGAGGCCGATCGCGTGCTGCTGTGCATCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGCGTG
GGTGCGGTACCGCGACTACGCGGCGCACGTGCCGCCGGAGGCGGCGGCGG
CGCGCGCGCAGGCGGACGCGCTGCGGCAGCGGCGGCAGCGCAATGCGGCG
CTGCTGGAGCGCGAGGCGCGGTGGGAGAAGTCGTGGCAGCCCGATATAGA
GGCGGCGCGGTGGCTGGACCCTGATACCGGCGAGGTGCTCATTGCAGGTG
TGTGGCGCCACTGGTCGCAGCAGTGTTATTGCTGTGATTTTTCGGCTAGC
AATCAAGTGTGCTTTGTGAGCAGGGCAGTCGTCCAAGTGGCATGTCTATG
AGCCGCCGCAGCCCTGCATTGGTGTTGCACAGCTCAGTTGTACTTGCAGA
GCACAGATGGTTCTGGCGACACGCAGCCAGTTGCCAGCCCGCAAGTGCGC
TCCCCCCCACAGACAACACCTCACAGCACTCTGCGCCGCGCTGCCGCCGC
TGAACGCCCCCCGTGCCCCCCGCGCCGCCGCCGCAGCCGCCGACGCCGAC
GGCTGGCGCCTCGAGGAGGACCCCGCCAGCGCTCAGCTCTTCTACGTCAA
CGCCGCCACCGGCGCGGCGGTCGCGGAGGGCGAGGGCGTGCCAGACCCGC
GGTTCGCGCGCCCTTCCGACAAGGCGCGCGCGCTGCGGGAGCAGGACGCC
GCCCTCGCGGAGCTGCGCTGGGGCGCGTACGTGTGCGCGGACCTCGCGGC
GCGCTGCGCGGGCGTCGCCGCCGCGCCCGCCGCCGCCGCGCTGCTGCAGC
GGCCGCCGCCGCCGCCCACCGCCGCGGGCAGCAACGCGGGCGCTGAAGAT
GGCACGGCTGCCGCACTGGACAGCAGCGGCGGCGGCGCTGGCGCGCTGCA
GCTGGCCGCTGGCGGCGGCGGCGAAAGCGGCGGCGGCGGCGGCGGCAGCA
GCAGCGCGGGCGTGACGCCCGCAGATACAACACGCGAGACGCGGCGCGTG
CGCGAGCTGCTGGAGCGGCTGCGCGACGGGCGCGACGTCACGCGCCTCGC
CGCGGCCGTCGCCGCCGCGCGCCGCGCGTTCCCCGCGGTACATGAGCTCG
AGGCGAGCGCCGAGTTCGGCGCCGCCGTCGCGACGCTGCGCCACGCCATG
GAGCTGCAGGAGTGGGGCGGCGCGGAGCTGCGCGCGATGCTCGACGCGAA
GCGCGCGTGGATGACGGGGGGGGATGGCGTGCGGGGGCGGGGGGGGGGGG
GGGGGGGGTGAACGACTGACCCAGCTTCAGAGGTTTGTCGCCTTTGCAGG
CTGGGGGTTGGTGGCCCAACTAAGTTGGGGGCTTTGTCACAGCGACTTTT
GGAAACCAATCGACAGCATGTGCTGCTGCCCGGGTGCGCTTGTACGCGCA
TGCTGCAAGGACTAGCACAATAGAGATGTGCCATGGCCACTACGCATTCA
CATGCTGTGGCCTAATGTCCGGGGCATGGCCTGGGCAGTTGGGGCTGGCA
TTGTATTTACCACTGTAAATACTTGGGAGTATTTTCAAGTACTTCAGAGG
AATGATTTTTGTAACAATGTTGGGGTATCGACATGGACGGGCCCCTGAAT
TACATGGGTGGCTGCCAAGCACATCACACAACTATCAATGATGAACATGT
GTCAACTGAAAGGTGTGGCTTGCACAATGGAGGCTATTGCTGCACATTGC
TGCGGTTGCTGCAATCGCGTGACGCCGACTGACATGGGGGGGGGGGGGAT
CTCTCAGACACTTGAACCTCGACACAGCATTGCATTCAACCGCAACAGAG
CGCGTGTGCACACGATAGATGAATGATGTGATGGCGCTGCCAGCTTCCTT
CTTAACTTCAAGCACAGCAATTGACACAGCACACCCAGACATGTCAAAAC
CAGTTCATTTGGGGTCATGAGAAACTGGCGCGCGAAACACCAAAACGCAC
TGCTCCACAACATGCTCAAACTGCGCCGCGATGCACGGCGTGCGGCGACC
AGCGCCACTCCAGGAAAAGGCGTTAATCCGACGTAAACGCTTGCCGTCCC
GGGCCGCGCGGCAGTGCCCAAGACTGCCTATGCGCCCGCTCACGTATCGT
TATGAACACTCCCCTGTACTTCTGCTGCGCCTGGCTGTCTGTGGCACTTC
ACCAGGGGGCAGCCCCTGCAGTCTGCCACAGACACACTGTGGGCCATAGC
CCACACAAGAAACTGATTGCACAGACCACACATACATGTCCGCGCGGCGC
GCCTCCCCCACGCAATGAAGTGAGGGCGGGTGCTGCTGCGTGAGTGCCAG
TTGGCACTCGGCATGAGCGCGCTGCGCCCGGCGGCGGCGGCGCTGCTGCT
GCTGCTGCTGCTGCTGCTGAGCAGTGCCCCCCGCTGCGCGCCCGGCGCAT
TGGGTCTCCAGATCTGATCACTGCTGCGCCCATGTGCGCAGCTGCTCGAC
CGCAGCGACCCCCCCCCCCTTCACGCTCCCACCTACACCTCCCACGAGAG
CCAATTGAGCAGCTTCGGCAGGAAAGGATTCCCTCCTTGGGCGGAAGAGA
CATTGGACTCAACAACACAGTCCGTCCCCATTTCCCCCTAGGCAAGCCCC
CCTTCCGC
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Coding sequence (CDS) from alignment at Contig_17:1053913..1064920-

>mRNA_3449 ID=mRNA_3449|Name=jgi.p|Trimin1|347963|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3345bp|location=Sequence derived from alignment at Contig_17:1053913..1064920- (Tribonema minus UTEX_B_3156 )
ATGCAGCTGGACCGGGAGGAGCGCCTTCGCACGGCTGGACCCAAATTTGG
TCTGCTGCTGGCGAAGCGGATGATGACTGCAGAAGCACGCCTTCACAAGC
AGGTGGAAACAGCAGTGGTCAGGGCAGCCCTGGCGGATTTGCCTGCCTCC
CTTCGAGACCTGGAATTCGTAGGTACAGGCATGGAGGAGCTTCGTGAGGG
CGAGCTGTGGGAGGTGCTGAGAAAAGGCCACATATTCGTGTCCGCCAATC
TCTCCGGGTGGCGCGGCATCAGCAGCGGCGCGCTGCGCAGTCTCGCGCTC
AACACGGGCGCGAGCCTCGAGACCGTCGACCTGAGCCGCACCGGCGTCGC
CGACGCGCAGCTCGAGGTCCTGTGCGCGCGCCTGTTTGCCATCAGGACGC
TGCGCCTCGCCGCGTGCCGCACGGTGACGAACCTCGGCCTGCGCGCCGTC
TCGGAGCTGTGCGGCGCGACGCTGACGGCGCTGGACGTGTCCGCGTGCGC
GGGGATCAACAGTGAGGGACTGGCGTGGATAGGGGGGGCTATTGGATTCG
GGGGCGGCTGCGCGCACCTACAGAGCCTCAACCTGGGGCTAACGGCCCTC
GCAGCGGGCTGCCCGCGCCTGCGCTTCCTCTCCCTAGAGGGCTGCCTGGG
GGCGGGCGACGCCGGCGTCGGCGCCGTGGCGCGCGCGTGCTCGCGCATGG
CGGTGCTCAACCTCCACGAGTGCCCGGCGCTCAGCGGCCGCGCCATCGAG
GACATTGGCTGCCACTGCGCGCGCCTGGCGAGCCTGAACGTCGGGCGCAA
CGGAAATGTAACCGACGCGGGACTGAAGGCGCTCGCTCGCGGCTGCCCGC
ACCTGGCATTCCTGAACGTCGCGGGCTCGCGCGCGATCTCCGAGGCGGGC
CTCTGCCCGCTCGTCACGCGGTGCCGCGGCCTCTACACGCTTAACCTCAC
CGGCTGCGCGCGCGTCACCGACGACGGCCTCGCCGCGCTCGTCGACGCCG
TAGGGCGCGACCTCGTGGCGCCCGCGCGCGCGTTCTTCGGCTACGCGCCG
CGCGCGGACCTCGCCGCCGCCAAGCTGCGCGCCGCGCGCGCGGCCGTCCG
CGACGCCGCCGCGCGCCGCCTCGCATACGCGGCGCACCGGCGGCGGCGGC
GGCGCCGCGAGGCGCGCGAGCGGCGGCGCTGCGGCGCCGCGGCGGTGCGG
CTGCAGGCGGCGTTCCGCGCGCACGCCGCACGGCGGCGGGCGGCGGCGCT
GCGCTGCCAGCGCGCCGCGCTGCTGGCGAAGGGGCGGCACGCCGTTCCCA
TCCAGGCGGTCTTCAAGGGGCATCTGGCGCGGCGCGGACCGCAGGCGCGC
GCCGTCGCGGCCGCCGTCGCCGCGCTGCGGCACGAGCGGCGCGTCGAGCT
GCGCTCAGCCGCGGCGGTGCACCTCGGCGCTGCCGTGCGCTCGTGGCTGG
CGCGGCGGCGCTGCGGCGCGTGGGCGGAGGTCAAGCGCCAGCGCGACCGC
GATAGGGGCGCCGCCGCGCGCTGCCTGCAGCAGGCCGGCCGCGCCTTCAT
CGCGCGCGCACGGCTCAGGCGGCTGCGCGAGGAGGCCGCGCGGCGCGCCG
CACTTGAAGCCGCCGCGGCCACGCGCATACAGGGACTGTGCCTCGGCGAG
ATGCTGCGGCGGCAGCGGGTGCAGCGGCTGCACGCCATGCACCGCGGCGC
GCTCGCGATGCAGTCGCTGGCGCGCGGCTCGCGCGGCCGCGCCGCGGCGC
GGCGGCGCCGCCGCGCCGCCGCCGCCGCCGCAGCCGCTGCCACCGCCATA
CAGCGCGTCTTCCGCAGCAGCAGGGTGCTGGGGTGGCGCGATGTGCGCAT
GAACAGGGTCACGCTGCACGTGCTGCGGCGGCAGGAGCTGGAGTACGCGG
AGCGCGCGGCGCTGGCGGCGCGGCGCGACGAGCGGCGCATCATGGAGGCC
AACCACGACGCGTGCGACGACGACTACGACGAGGACGCGGAGGCAGCGCT
CAACGCCGCCGCCGACGCCGCGTGGGAGGAGGTCTGGGACGAGGCGCGTG
GCGCCGCCGTCTGGCGCAGCGCGGCGACCGGCGCCACCGCCGCGGCGCGC
CCGCACGCCTTCGAGGAGGCGCGTCGTACGAGGGCGCCGTGGGCGCGTAC
CGGCGCCGCGGCGCGCGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGG
CGGGGCGGCACCGTATCGACTACGACGACGGCGAGCATGAGTGGATGGCG
CTGGGCGCGGAGGCCGATCGCGTGCTGCTGTGCATCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGCGTGGGTGCGGTACC
GCGACTACGCGGCGCACGTGCCGCCGGAGGCGGCGGCGGCGCGCGCGCAG
GCGGACGCGCTGCGGCAGCGGCGGCAGCGCAATGCGGCGCTGCTGGAGCG
CGAGGCGCGGTGGGAGAAGTCGTGGCAGCCCGATATAGAGGCGGCGCGGT
GGCTGGACCCTGATACCGGCGAGGTGCTCATTGCAGCCGCCGACGCCGAC
GGCTGGCGCCTCGAGGAGGACCCCGCCAGCGCTCAGCTCTTCTACGTCAA
CGCCGCCACCGGCGCGGCGGTCGCGGAGGGCGAGGGCGTGCCAGACCCGC
GGTTCGCGCGCCCTTCCGACAAGGCGCGCGCGCTGCGGGAGCAGGACGCC
GCCCTCGCGGAGCTGCGCTGGGGCGCGTACGTGTGCGCGGACCTCGCGGC
GCGCTGCGCGGGCGTCGCCGCCGCGCCCGCCGCCGCCGCGCTGCTGCAGC
GGCCGCCGCCGCCGCCCACCGCCGCGGGCAGCAACGCGGGCGCTGAAGAT
GGCACGGCTGCCGCACTGGACAGCAGCGGCGGCGGCGCTGGCGCGCTGCA
GCTGGCCGCTGGCGGCGGCGGCGAAAGCGGCGGCGGCGGCGGCGGCAGCA
GCAGCGCGGGCGTGACGCCCGCAGATACAACACGCGAGACGCGGCGCGTG
CGCGAGCTGCTGGAGCGGCTGCGCGACGGGCGCGACGTCACGCGCCTCGC
CGCGGCCGTCGCCGCCGCGCGCCGCGCGTTCCCCGCGGTACATGAGCTCG
AGGCGAGCGCCGAGTTCGGCGCCGCCGTCGCGACGCTGCGCCACGCCATG
GAGCTGCAGGAGTGGGGCGGCGCGGAGCTGCGCGCGATGCTCGACGCGAA
GCGCGCGTGGATGACGGGGGGGGATGGCTTGGCACTCGGCATGAGCGCGC
TGCGCCCGGCGGCGGCGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGC
AGTGCCCCCCGCTGCGCGCCCGGCGCATTGGGTCTCCAGATCTGA
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