mRNA_3413 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A836CJW0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW0_9STRA) HSP 1 Score: 1027 bits (2655), Expect = 0.000e+0 Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 1
Query: 1 MLAAYASQAEQHPLAAAAAATSAPALRRTRALRKPPHAAPTLAAAPHARGSRTVRDVRMRANVVPHPTPPLQLQNAAYMLHSAARAGAGDGCLPPALRHLYADGAAAAAAAGPAPLSGGTPKPHAVELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ 1830
MLAAYASQAEQHPLAAAAAATSAPALRRTRALRKPPHAAPTLAAAPHARGSRTVRDVRMRANVVPHPTPPLQLQNAAYMLHSAARAGAGDGCLPPALRHLYADGAAAAAAAGPAPLSGGTPKPHAVELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ
Sbjct: 1 MLAAYASQAEQHPLAAAAAATSAPALRRTRALRKPPHAAPTLAAAPHARGSRTVRDVRMRANVVPHPTPPLQLQNAAYMLHSAARAGAGDGCLPPALRHLYADGAAAAAAAGPAPLSGGTPKPHAVELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ 610
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A6H5JP51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP51_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.810e-101 Identity = 250/524 (47.71%), Postives = 301/524 (57.44%), Query Frame = 1
Query: 379 ELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAA---------------APAKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHR-----------IAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGE---------------VLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 1827
E L +VR A W+ ++ E+ ALA E G A+PR GS XXXXXXXXXXXX XXXXXXXXXXXXX A GFLFDS DLLDAV+A+R+PNRS FL + WG +V L LR ELR + EL+P RQ+ LDD RF ER + G L G + +ARRGV +LRP +WR +LGLP A+ QA + E+ L+ EV R ELVTD LY LDV I DDDKYF FEE L DV++AF+RD V + H +P ++GAGA G PPCGVQPFRGLV+YAA LCFL+ ER VY R M+ R+WCRLNA+RS PG LL LL+LFE HHP+L+ KL +LG+Q PL+LAMPWIQFGFV YLE + VL LWDR+L YDSL LL LAA+V VFR+ VL DA AV + F+DG L+ +PLLQAF+FP
Sbjct: 36 EPLDYVRKACSRWRANVADELRALAAERGGRFARPRAGGSPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGTGGFLFDSADLLDAVSAIRSPNRSDFL--------------PVEEEWG-MVHLQLRVKSLEELRESYRELSPELRQTGLDDRGGFGE---------------DRFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKAS-KQALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGA-GGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFER----HHPRLVRKLLQLGVQ-PLQLAMPWIQFGFVTYLEADQASLCTTACSSSPCDLVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFP 522
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A8J2WGK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGK4_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.350e-97 Identity = 198/483 (40.99%), Postives = 271/483 (56.11%), Query Frame = 1
Query: 385 LSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIP-HRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ 1830
L+ V+ A + W+ SI E+ A+A E PL + R++ XX + P FLFDS DLLDA++ + +P+ + + WG LV L LRT ELR ++ EL P+ RQ +DD D +F D GE LA G + R +ARRGVPP+LRP ++R +LGLP QA +A E + E L + V +ELVTD LY++DV H+ DDD YF+F+E+L + V+AF+RD+ VP V THAP+P G P VPPCGVQPFRG VSYAAPL F++ +Y AFRA Y +++CRLN +R+ LL L LFE L+ HHP+L L ++G+ PL +A+PWIQFGFVG L+V +VL LWDR+L ++ L+LL LAAA+FV+RS +L + R+ FADG L+ +PLLQ FL+P+
Sbjct: 87 LASVQKARKQWEASINDELRAIASERRVPLVRKRKK--------IVIKXXEEETDELIEMKVEEILSPTLVTPGTRFLFDSDDLLDAISHIESPSNN--------------------EGWG-LVKLQLRTATLTELRDKYKELHPSKRQYGVDDVTGDPR-------------DKAKFADAWHELGEKCLAEGHIPLARTYARRGVPPSLRPAVYRSLLGLPHMEDAQATSAFEERYYEDLRDRVDSIELVTDELYQMDVQHVADDDTYFIFDEMLGNCVLAFSRDSWVPKNCVVKTHAPLPCENDLMKGQP---VPPCGVQPFRGFVSYAAPLTFVFGRETSLYFAFRAFYAQHFCRLNVLRTNQNTLLPLCALFERLVIEHHPRLFFYLVQVGVD-PLAIALPWIQFGFVGLLDVEQVLLLWDRLLGFEDLALLSVLAAAIFVYRSEKLLQCSSLEEAREMFADGAVLEVVPLLQTFLWPE 523
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: D7FT85_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT85_ECTSI) HSP 1 Score: 313 bits (801), Expect = 9.760e-95 Identity = 237/509 (46.56%), Postives = 283/509 (55.60%), Query Frame = 1
Query: 379 ELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAK---------------GFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHR-----------IAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 1827
E L HVR A W+ ++ E+ ALA E G A+PR GS XXXXXXXXXXXX XXXXXXXXXXXXX GFLFDS DLLDA L LR ELR + EL+P Q+ LDD RF ER + G L G + +ARRGV +LRP +WR +LGLP A Q + E+ L+ EV R ELVTD LY LDV I DDDKYF FEE L DV++AF+RD V + H +P ++GAGA G PPCGVQPFRGLV+YAA LCFL+ ER VY R M+ R+WCRLNA+RS PG LL LL+LFE L++ HHP+L+ KL +LG+Q PL+LAMPWIQFGFV YLE +VL LWDR+L YDSL LL LAA+V VFR+ VL DA AV + F+DG L+ +PLLQAF+FP
Sbjct: 180 EPLDHVRKACSRWRANVADELRALAAERGGRFARPRAGGSPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGFLFDSADLLDA--------------------------------------LQLRVKSLEELRESYRELSPELHQTGLDDRGGFGE---------------DRFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKALTPQ-----DLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGA-GGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFESLVQRHHPRLVRKLLQLGLQ-PLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFP 628
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN) HSP 1 Score: 285 bits (730), Expect = 1.090e-87 Identity = 166/364 (45.60%), Postives = 226/364 (62.09%), Query Frame = 1
Query: 748 GLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHR----IAGAGAPRGT-VPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLF 1824
G+V L L T +LR F EL P+ RQ A RF DE A G+ LA G + RR+ARRGVPP+LRP ++R++LGLP Q + AE + +L V ++ELVTD L+++DV H+ D+D YF FEE L +VV+AF+RD V +AV THA + + G G+ VPPC VQPFRG VSY APL F++ P+Y RAMY ++WC+LN +R+A LL L +LFE L+ +HP+L L ++G+ PL +A+PWIQFGFVG L+V +VL LWDR+L ++ LSLLP LAAA+FV+RS +L+A D V+D F+DG+ L+ +PL+Q FLF
Sbjct: 2 GVVKLQLHTEPVRKLRETFRELHPSKRQR---------------GRRKLGDAQADRFSDEWHALGKRCLARGHVPLARRYARRGVPPSLRPQIYRVLLGLPNVEHPQGCSEAEKAYYARLKAHVDKIELVTDELFQMDVQHVADNDYYFPFEEALGNVVLAFSRDPWVLHNSAVRTHARLAAKHKEPTDGPAWKAGSAVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVD-PLAVALPWIQFGFVGLLDVDQVLLLWDRILGFEDLSLLPILAAAIFVYRSEKLLSATSLDDVKDMFSDGSILQVVPLIQTFLF 349
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A7S2H1X2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X2_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.040e-78 Identity = 148/310 (47.74%), Postives = 194/310 (62.58%), Query Frame = 1
Query: 940 GEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPI------------PHRIAGAGAP-RGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ 1830
G + + G + VR+FAR GV ALRP +WR+MLGL + A E++H +L EV+RVE TDGL E+DV D + YF FE++L+ VV+AF+RDA V + TH P+ P R G + VPP GV PF+GL+SYAAPL L+ E V++ FRAMY RYWCRLN +R+A G LL L LFE+LL+CH P+L L GIQ PL +A+PWIQF FVG L+ G+VL LWDR+L +D L+LLP LA A+F+FRS V+ D + + F +GT L+ PLLQ +FP
Sbjct: 27 GHSLIQDGYIPAVRQFARTGVCVALRPRMWRIMLGLKSDVT-----AGESDHYAKLTSEVQRVEYATDGLLEMDVSQSSDLENYFPFEDLLKSVVLAFSRDAWVRGMSMFQTHHPLIDPADLDSTSTSPERDKGGRSNCLKMVPPSGVLPFKGLMSYAAPLTLLFEEEDAVFSVFRAMYARYWCRLNVLRTAEGTLLPLCHLFEELLQCHDPRLFFHLTRSGIQ-PLAIALPWIQFAFVGLLDPGQVLVLWDRILGFDDLALLPVLACAIFIFRSPTVMGIADKAGIEEVFLEGTELRVAPLLQHLVFPS 330
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A7S3YGJ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGJ5_HETAK) HSP 1 Score: 259 bits (662), Expect = 1.190e-78 Identity = 139/279 (49.82%), Postives = 182/279 (65.23%), Query Frame = 1
Query: 976 VRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQ 1812
R++A++GVP ALR G+WR LGL A A E+ H LL E +R++L+TD L+E+DV I DDD+YFVFE++LRD V AF+RDA V + V H P+ AP VPPCGVQPFRG +Y APLCFL+ + Y RA++ R+WCRLNA+R PG LL L +LFEDL+ P +L LG+ PL + MPWIQFGFVG+LE ++L LWDR++ + SL LLP LAA++ +FRS +L AD +RD F D T LK +PLL+
Sbjct: 1 ARQYAKQGVPTALRAGIWRCALGLR----PSGAIAGESAHFRWLLSEGQRIDLITDDLFEMDVQFIADDDRYFVFEDMLRDCVGAFSRDAQVLRGSDVLPHQPLVGHHGEGQAPGTAVPPCGVQPFRGFCNYLAPLCFLYHDAPTCYGVARALWCRFWCRLNAVRGRPGTLLPLCKLFEDLVLQGAPDAFARLVALGVS-PLSIVMPWIQFGFVGFLEPDQILLLWDRIIGFQSLHLLPVLAASIIMFRSHNILKVDSADGLRDLFQDITRLKVVPLLR 274
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A0G4ISX4_PLABS (Rab-GAP TBC domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISX4_PLABS) HSP 1 Score: 245 bits (626), Expect = 6.120e-70 Identity = 158/396 (39.90%), Postives = 218/396 (55.05%), Query Frame = 1
Query: 748 GLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAAL--AGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAA-----------VATHAPIPHRIAGAGAP------------------------RGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLF 1824
GL+ LSL+TP A LR R+ +L+P R LDD + F ++R GE L A + D+ R+A+ GVP +LRP W+ +LG+ + D A + E+L+ +VRR EL+TD LY L+V D+ YFVFE++L ++++AF+RD+ +P + V + A +P R GAG P T+PPCGV PF V AAPLC+L+ Y FR MY RY+CRL+ I S PG +LHL +LFEDL++ PQ+ E+G+ PLR+ PW+ F GYL V +VL LWDR+LAYDSL LL LA+A+F+FRS +VL A +D +RD F DG + +PLLQ FLF
Sbjct: 180 GLIKLSLKTPSLATLRERYRQLSPDVRHVGLDDELAGL----------------EWFRNQRYVEGERLLNDAQTTVADLMRYAQTGVPASLRPRFWKRILGVWTSDRDVA-------YYERLITQVRRWELITDDLYRLEVQETTDNAAYFVFEDMLDEIMLAFSRDSWLPKNSTLPLCLAPLTTNVFSEAAVPGRDDGAGYPFADANGKLSPSLVENSGIEIDDQGTATIPPCGVVPFHHQVMLAAPLCYLFQRCEHTYFVFRHMYARYFCRLHTISSRPGTILHLCKLFEDLVQSRSPQVFYHAVEVGMP-PLRVVFPWLFTAFSGYLAVDQVLTLWDRILAYDSLELLAILASAIFLFRSKSVLNATSSDEIRDIFEDGIYFRVMPLLQHFLF 551
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A1V9YY17_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YY17_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.520e-62 Identity = 153/408 (37.50%), Postives = 214/408 (52.45%), Query Frame = 1
Query: 604 AKGFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 1827
A FL +LL A+ ++ NR++ + DS D W + L L T +AE++ R+VEL P H Q LD+ + G+ L G + + R++A+ G P +RP +WR L + A QAA +QL + TDG+Y +DV D YF FE+ LR V++AF+RDAT+P +A AP+ ++AG VPP V P GLV +AAPLC+L+ + A VY FR MY RYWC+L AI S P +L L + FE LL P ++ L + GI PL +A PWIQ GF G LE+ +VL LWDRV+ YDSL +LP AAA+F FR+ +L A+ V+D F++ + +P+LQ FLFP
Sbjct: 151 ANRFLTSGDELLQALQRIKAVNRASHV---DS------------DYWCTIQPL-LYTKTSAEMQQRYVELGPTHAQFGLDEDVPNILGDYVYIT-------------NKNKIGDRVLVNGTVPNARQYAKTGCPINIRPHVWRQALNVEVNAKKQAA-------FQQLQALSMQSVFATDGIYLMDVQQTTDSSDYFPFEDHLRCVMLAFSRDATIPTQAVAVMEAPLTAQLAGGATT--AVPPSTVLPLSGLVMFAAPLCYLYNDPAHVYFIFREMYCRYWCQLYAISSKPNSILALCKTFETLLVRSIPHVVHHLLQHGIT-PLTIAFPWIQSGFSGVLEIDQVLLLWDRVIGYDSLEILPIFAAALFNFRAQDLLLVIRAEDVKDLFSEALEILVLPILQQFLFP 519
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Match: A0A067CZ08_SAPPC (Rab-GAP TBC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZ08_SAPPC) HSP 1 Score: 221 bits (562), Expect = 5.100e-61 Identity = 149/405 (36.79%), Postives = 209/405 (51.60%), Query Frame = 1
Query: 613 FLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQRFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 1827
FL S D L A+ ++ NR+A + AD W + L L T + E++ R+VEL P H Q LD+ + G+ L + + R++A+ G P +RP +WR L + A QA H QL TDG+Y LDV D YF FE+ LR V++AF+RDA++ +AA +P+ ++ + VPP GV P GLV +AAPLC+L+ + A VY FR MY RYWC+L+ I S P +L L + FE LL P ++ L + GI PL +A PWIQ GF G LE+ +VL LWDRV+ YD+L +LP AAA+F FR+ +L AD VRD F++ ++ +P+LQ FLFP
Sbjct: 154 FLCTSDDFLQALQRIKAVNRAAHID---------------ADYWCTIQPL-LYTKTSLEMQQRYVELGPTHAQFGLDEDVPNIIGDYVYIA-------------NKNKIGDRVLVNSTVPNARQYAKTGCPINIRPHVWRQALNVVINAEKQA-------HFMQLQALTTSSVYATDGMYLLDVQQTTDSSDYFPFEDHLRSVMLAFSRDASIRTQAAARLESPVSTTMSNGAST--AVPPSGVLPLSGLVMFAAPLCYLYNDPAHVYFIFREMYCRYWCQLHVISSQPNAILPLCKTFESLLVRTIPHVVHHLLQHGIT-PLAIAFPWIQSGFSGVLEIDQVLLLWDRVIGYDTLEILPIFAAALFTFRAKDLLLVLRADDVRDLFSEALEIQVLPILQHFLFP 519 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347942 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3413 ID=mRNA_3413|Name=jgi.p|Trimin1|347942|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1833bp|location=Sequence derived from alignment at Contig_17:754633..758826+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGCTGCATATGCCTCACAAGCAGAGCAGCACCCGCTCGCAGCAGCback to top protein sequence of jgi.p|Trimin1|347942 >Trimin1|347942|estExt_Genemark1.C_Ctg_170101 ID=Trimin1|347942|estExt_Genemark1.C_Ctg_170101|Name=jgi.p|Trimin1|347942|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=611bp MLAAYASQAEQHPLAAAAAATSAPALRRTRALRKPPHAAPTLAAAPHARGback to top mRNA from alignment at Contig_17:754633..758826+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3413 ID=mRNA_3413|Name=jgi.p|Trimin1|347942|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4194bp|location=Sequence derived from alignment at Contig_17:754633..758826+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_17:754633..758826+ >mRNA_3413 ID=mRNA_3413|Name=jgi.p|Trimin1|347942|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1833bp|location=Sequence derived from alignment at Contig_17:754633..758826+ (Tribonema minus UTEX_B_3156 )back to top |