mRNA_3319 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161580
Unique NamemRNA_3319
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A835Z617_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z617_9STRA)

HSP 1 Score: 630 bits (1625), Expect = 1.260e-226
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 1
Query:    1 MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA 1089
            MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA
Sbjct:    1 MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA 363          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A835Z5U7_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U7_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 2.840e-149
Identity = 221/283 (78.09%), Postives = 251/283 (88.69%), Query Frame = 1
Query:  184 SAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQL-KEQASSGYHDVDEV 1029
            SAEVD+SK PVVKKVV K  D+I+QIK S+A+NFL N+L  EQL EV+DAME+KDYAAG  II EG DGDNFYV+ASGECEVFIEGKNDGAALR ++ G GFGELALMYNAPRSATIKA   V+CWALDR TFRRTIMAAGQARRKKYE FL +L+LL+HLTP +IAQLADAVEPLSF A +T+IEQGD DRQ+FKFYI+EEG++QAFIRKDG DVLMSTLG G+YFGEKALV+MTPRTATVKA +A+KCACLSIAAFERLMG C +L KE+AS+GY+DVDEV
Sbjct:   43 SAEVDKSKEPVVKKVVPKEQDIINQIKESVANNFLFNALQPEQLEEVVDAMEQKDYAAGDTIISEGADGDNFYVIASGECEVFIEGKNDGAALRVMKAGSGFGELALMYNAPRSATIKAKVAVRCWALDRATFRRTIMAAGQARRKKYEQFLVKLDLLKHLTPAEIAQLADAVEPLSFAAAETVIEQGDGDRQSFKFYIVEEGQAQAFIRKDGNDVLMSTLGVGDYFGEKALVQMTPRTATVKAQTALKCACLSIAAFERLMGPCAELLKERASTGYNDVDEV 325          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: D8LHU5_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU5_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 3.060e-95
Identity = 159/264 (60.23%), Postives = 199/264 (75.38%), Query Frame = 1
Query:  184 SAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLR--HLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLM 969
            SAEVD SKAP VKKVV KT   +  I+ +I+  FL +SL   Q  EV+D+MEE+ Y +G  +I+EG  GD FYV  SGE EVFI GKN+   LRT+++G  FGELALMYN+PR+AT+KAV     WALDR TFR TI+ AGQ RR+KYE FL  +E+L+  +L+  DIAQLADAVEP++F  GDTII++GD DR  FKFYI+E+GE++A++ +DG +VLMS L  G++FGEKALVE TPRTATVKA   +KCA LSIA FERLM
Sbjct:   52 SAEVDASKAPRVKKVVPKTDAQLKDIEKAISRCFLFSSLCEAQRKEVVDSMEERRYQSGDAVIEEGGPGDFFYVTGSGELEVFIAGKNNDEPLRTLKSGDAFGELALMYNSPRTATVKAVTGCLVWALDRTTFRHTILEAGQQRRQKYEVFLANVEILKRANLSATDIAQLADAVEPIAFADGDTIIKEGDDDRSLFKFYIVEDGEARAYVHEDGEEVLMSHLHPGDHFGEKALVEKTPRTATVKAHGPLKCAALSIAGFERLM 315          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A067BNM2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BNM2_SAPPC)

HSP 1 Score: 220 bits (560), Expect = 5.750e-66
Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 1
Query:  220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLK 1044
            KK V K+ D I++IK S+ASNF+ NSL  EQ  +VI AMEEK    G  +I +G +GD FYV+  GE +VF         +     G  FGELALMYN+PR+AT+ A  D   WALDR TFRR I+ A + R +KYE  L  +EL+ HLT  +++ +ADA++P ++ AGD +I Q DAD   F FY++ +GE    +   DG   ++ ++G G YFGEKAL E + R  +V A + V C  + +A FERLMG    + E+  + Y +  EV   L+
Sbjct:   24 KKFVPKSDDAIERIKRSVASNFMFNSLDVEQQRDVIGAMEEKVVRRGDIVINQGDEGDYFYVIDDGELDVFTRATGLATPVFHYVRGNTFGELALMYNSPRAATVVATTDAVLWALDRDTFRRIIVTASKMRSQKYEALLANMELMSHLTRHEVSIIADALQPATYRAGDVVIRQDDADYNTFHFYLLVDGECNFVYSDDDGTSSVVGSVGPGGYFGEKALTEKSKRAVSVVAATDVSCLSMDVATFERLMGPFQDIFERQITSYPNASEVHFELR 299          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: T0RL94_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RL94_SAPDV)

HSP 1 Score: 208 bits (530), Expect = 6.390e-61
Identity = 119/281 (42.35%), Postives = 168/281 (59.79%), Query Frame = 1
Query:  220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSD 1059
            KK V K+ D I++IK ++A NF+ NSL  EQ  +VI AMEEK    G  II+ G +GD FYVV  GE +VF   K+    +     G  FGELALMYN+PR+AT+ A  D   WALDR TFRR I+ A + R +KYE  L  +EL+ HLT  +++ +ADA++P ++ A D II Q D D   F FYI+ +GE    +   DG+  ++ ++G   YFGEKAL E + R  +V A + V C  + +A FERLMG    +  +  + Y +  EV   ++  ++D
Sbjct:   70 KKFVPKSDDAIERIKRAVAGNFMFNSLDTEQQRDVIGAMEEKVVRLGDAIIKLGDEGDFFYVVDEGEFDVFTH-KSPQEPVFHYTKGNTFGELALMYNSPRAATVVATADAVLWALDRDTFRRIIVTASKLRSQKYESLLVGMELMSHLTNAEVSVIADALQPAAYRASDVIIRQDDEDYNAFHFYIVMDGECNFVYTDGDGKSSVVGSVGPCGYFGEKALTEKSKRAVSVVAATDVTCLSMDVATFERLMGPFQDIFSRQITSYANASEVHLEMQSARTD 349          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A485LE61_9STRA (Aste57867_19409 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE61_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.340e-61
Identity = 119/273 (43.59%), Postives = 172/273 (63.00%), Query Frame = 1
Query:  214 VVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEV 1029
            +VKKVV K+ + I++IK +++ NF+  SL AEQ  +VI+AMEE+    G  +I++G +GD FYV+ SGE +V+ E     A +     GG FGELALMYN+PR+AT+ AV     WALDR TFRR I++A Q R +  E  L  ++L+ +LT  +++ +ADA++P  F AGD II+QGDA    F FYI+ EG  +  F  +DG   ++  +    YFGEKAL E + R  +V A S VKC  + +A FERLMG   ++  +  +GY +  +V
Sbjct:   71 LVKKVVPKSPETIERIKVAVSVNFMFKSLDAEQEMDVINAMEERIVKPGDQVIKQGAEGDYFYVIESGEYDVYTE--RSAAPVFHYTNGGTFGELALMYNSPRAATVVAVTAGALWALDRDTFRRIIVSANQKRSELNEKLLANMDLMANLTHMEVSVIADALQPAHFRAGDVIIKQGDARYSLFHFYILVEGSCEFVFTDEDGDSSVVGRVDAVGYFGEKALTEKSKRAVSVVATSDVKCLSMDVATFERLMGPFQEVFHRKITGYANASDV 341          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A024UHR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHR7_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.780e-61
Identity = 120/274 (43.80%), Postives = 176/274 (64.23%), Query Frame = 1
Query:  220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGE---YFGEKALVEMTPRTATVKALS-AVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEV 1029
            KK+V K+A  I++IK ++A NF+LNSL +E+L +VI AMEE+   AG  II++G +GD FYV+ +GE +V+ +    G  +      G FGELALMYN+PR+AT+ AV     WALDR TFRR ++ A ++R ++ E FL+ ++L+ +LTP +++ +ADA++P++F AGD IIEQGDA+  +F FYI+ +G + AF+   G     + +G  E   YFGEKAL E + R  +V A S  V C  + +A FERLMG    +  +    Y D   V
Sbjct:   75 KKIVPKSAATIERIKCAVACNFMLNSLGSEELMDVIHAMEERKVQAGDTIIKQGDEGDYFYVIDNGEFDVY-KSSTPGVPVFHYSNEGTFGELALMYNSPRAATVVAVSSGALWALDRDTFRRIVVTANKSRSEQNEKFLSGMDLMANLTPSEVSTIADALQPVTFRAGDVIIEQGDANYASFHFYILIQG-TCAFVLTHGETGDRTPIGNVEAVGYFGEKALTEKSKRAVSVIATSDVVHCLSMDVATFERLMGPFHDVFHRKIHSYVDPTNV 346          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A0L0SSL3_ALLM3 (cAMP-dependent protein kinase regulatory subunit n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SSL3_ALLM3)

HSP 1 Score: 206 bits (525), Expect = 1.700e-59
Identity = 115/269 (42.75%), Postives = 169/269 (62.83%), Query Frame = 1
Query:  208 APVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGY 1011
            AP  K ++ KT +   +I+ASIA+NFL  +L  +Q ++V+DAM EK  AAG  +I++G  GD FY+V +G  +V++      A +     GG FGELALMYNAPR+AT+ A  D   WALDRVTFRR +M     +R+ YE FL ++ LL  L P +  ++ADA+E ++FE G+T+I+QGD       FY+IE G+++   + ++G +  M  L +G YFGE AL+   PR AT+KA   +KCA L   AF RL+G   ++ ++ +  Y
Sbjct:  137 APAEKVLIPKTPEQRARIQASIATNFLFRNLDEDQYTDVVDAMAEKKVAAGEAVIRQGGVGDYFYIVETGTLDVYVARNGVEAKVFDYGPGGSFGELALMYNAPRAATVTATSDAVLWALDRVTFRRILMDHTSRKRRMYEAFLEEVPLLSSLEPYERHKIADALESVTFEDGETVIKQGDI---GDNFYLIEAGDAEVVKVDENGVEHQMRPLRKGNYFGELALLSDKPRVATIKAKGKLKCATLGKKAFTRLLGPLAEIMQRNTQNY 402          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A068S010_9FUNG (cAMP-dependent protein kinase regulatory subunit n=3 Tax=Lichtheimia TaxID=688353 RepID=A0A068S010_9FUNG)

HSP 1 Score: 204 bits (520), Expect = 1.200e-58
Identity = 117/272 (43.01%), Postives = 168/272 (61.76%), Query Frame = 1
Query:  217 VKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAA---LRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDV 1020
            VK+V+ KT +  ++I+AS+ +NFL  +L  EQ  +V++AM EK  A    +I++G  GD FYVV SG  + +I     GA    + +   GG FGELALMYNAPR+ATI A  D   WALDRVTFR  +M     +R+ YE FL ++ LL+ L P +  ++ADA++ + FEAG T++ +GD      +FYIIE G++  + +  DG    ++ LG G YFGE AL+  TPR ATV A   +KCA L   AF RL+G  +++ ++ S  YH +
Sbjct:  147 VKQVIPKTQEQCERIRASVGNNFLFKNLDEEQYQDVVNAMAEKRVALDETVIEQGGVGDFFYVVESGTFDCYIS--KAGAPPNKVTSYEAGGSFGELALMYNAPRAATIVATSDAVLWALDRVTFRTILMENTSRKRRMYESFLEEVPLLKSLEPYERHKIADALDTVYFEAGATVVVEGDV---GDRFYIIESGDASVYRLGPDGMQQEVNALGRGNYFGELALLNDTPRAATVVAQGRLKCATLGKKAFTRLLGPVLEILKRNSENYHAI 413          
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A4P9XXD4_9FUNG (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXD4_9FUNG)

HSP 1 Score: 201 bits (511), Expect = 1.530e-58
Identity = 112/267 (41.95%), Postives = 165/267 (61.80%), Query Frame = 1
Query:  226 VVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVD 1023
            V+ K+     +I ++++SN L  +L ++Q   V+DAM E+  AA   +IQ+G +GDNFYVV  G  EV + GK     +  +  GG FGELALMYN PR+AT+ AV D   W +DRVTFRR +      +RK YE FL  + +L  L P ++ +L+DA+EP ++E GD I+EQGD       FYIIE+GE +   + +DG ++++ +L  G+YFGE AL+  TPR ATV A + V+ A L+  AF RL+G  + + ++ +  Y   D
Sbjct:   27 VIPKSDQAKMRIASAVSSNMLFGNLDSDQRRMVVDAMFERRVAANETVIQQGDEGDNFYVVDDGLFEVLVNGKK----VVEVEAGGSFGELALMYNTPRAATVTAVVDSILWGVDRVTFRRCVTGHNFRKRKLYESFLKTVPILSKLHPSEVTKLSDALEPANYEEGDYIVEQGDLGNY---FYIIEQGEVEVTKVDEDGNELMLPSLSAGDYFGELALIHNTPRAATVMAKNDVRVAALAKDAFVRLLGPVVDIMKRRTISYSTFD 286          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z617_9STRA1.260e-226100.00Camp-dependent protein kinase regulatory subunit n... [more]
A0A835Z5U7_9STRA2.840e-14978.09Camp-dependent protein kinase regulatory subunit n... [more]
D8LHU5_ECTSI3.060e-9560.23cAMP-dependent protein kinase regulatory subunit n... [more]
A0A067BNM2_SAPPC5.750e-6643.48Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
T0RL94_SAPDV6.390e-6142.35Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LE61_9STRA7.340e-6143.59Aste57867_19409 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UHR7_9STRA9.780e-6143.80Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A0L0SSL3_ALLM31.700e-5942.75cAMP-dependent protein kinase regulatory subunit n... [more]
A0A068S010_9FUNG1.200e-5843.01cAMP-dependent protein kinase regulatory subunit n... [more]
A0A4P9XXD4_9FUNG1.530e-5841.95cAMP-dependent protein kinase regulatory subunit n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:64227..66457 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161580|e_gw1.17.190.1
BRITEko00000,ko00001
KEGG Pathwayko04910,map04910
KEGG koko:K04739
DescriptioncAMP-dependent protein kinase regulator activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0664@1|root,KOG1113@2759|Eukaryota
Evalue5.01e-96
Seed ortholog2880.D8LHU5
Hectar predicted targeting categoryother localisation
TranscriptId161902
TrackFilteredModels1
ProteinId161580
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161580gene_3319Tribonema minus UTEX_B_3156 geneContig_17 64227..66457 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3319_1exon_3319_1Tribonema minus UTEX_B_3156 exonContig_17 64227..64484 +
exon_3319_2exon_3319_2Tribonema minus UTEX_B_3156 exonContig_17 64717..65081 +
exon_3319_3exon_3319_3Tribonema minus UTEX_B_3156 exonContig_17 65305..65593 +
exon_3319_4exon_3319_4Tribonema minus UTEX_B_3156 exonContig_17 66278..66457 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3319CDS_3319Tribonema minus UTEX_B_3156 CDSContig_17 64227..64484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161580Trimin1|161580|e_gw1.17.190.1Tribonema minus UTEX_B_3156 polypeptideContig_17 64227..66457 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1092bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGACCAGCTTCAGCAAGAGCGCAGCGTCGCCCACCGCAGCAGCTGC
TGCGGAGCCAGCAGCAGCAGACCTTGAAGTGACGCCAAGTGCGCCAACAA
GCGCTGCGGCCGAGGCTGACGCTGCGCCAGTGCCAGCGCCCCTGCCGGCT
GGTGCCGCACCGCGAAGGCGACGCGTCAGCGTGAGCGCAGAAGTGGATCA
GTCCAAGGCCCCTGTGGTGAAAAAAGTGGTGGAAAAGACTGCGGATGTCA
TTGATCAGATCAAGGCCTCCATTGCCTCCAACTTCCTGCTCAACTCGCTG
CCCGCCGAGCAACTCTCTGAAGTCATCGACGCGATGGAGGAGAAGGACTA
CGCCGCCGGCGCGTGCATCATACAGGAGGGCCACGACGGCGACAACTTCT
ACGTCGTCGCCAGCGGCGAGTGCGAGGTGTTCATTGAGGGCAAGAACGAC
GGCGCGGCGCTGCGCACGATACGCACCGGCGGGGGCTTTGGAGAGCTGGC
GCTCATGTACAATGCGCCGCGTTCCGCGACCATCAAGGCGGTGGGGGATG
TGAAGTGCTGGGCGCTGGACAGGGTGACGTTCCGGCGCACGATCATGGCG
GCGGGGCAGGCGCGCCGCAAGAAGTACGAGCACTTCCTCAACCAGCTGGA
GCTGCTGCGGCACCTGACGCCCGGCGACATTGCTCAGCTGGCCGACGCAG
TGGAGCCGTTGAGCTTTGAAGCGGGGGACACCATAATAGAGCAGGGGGAC
GCAGACAGGCAGAACTTCAAGTTCTACATTATTGAGGAGGGGGAGTCGCA
GGCGTTCATTCGCAAGGATGGCAGGGACGTGCTGATGAGCACGCTGGGGG
AGGGCGAGTACTTTGGGGAGAAGGCGCTGGTGGAGATGACGCCGCGCACC
GCCACTGTCAAGGCTCTGAGCGCTGTCAAGTGCGCATGCCTGAGCATCGC
TGCATTCGAGCGCCTCATGGGCTCGTGCATGCAGCTCAAGGAGCAGGCCA
GCTCAGGGTACCACGACGTAGATGAGGTGAGTCACTGGTTGAAGTTGTTG
CAGTCAGATCGACCGCTCTCCATCACAGTGAGCTGTGCTTGA
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protein sequence of jgi.p|Trimin1|161580

>Trimin1|161580|e_gw1.17.190.1 ID=Trimin1|161580|e_gw1.17.190.1|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=364bp
MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSAAAEADAAPVPAPLPA
GAAPRRRRVSVSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSL
PAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKND
GAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMA
AGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGD
ADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRT
ATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLL
QSDRPLSITVSCA*
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mRNA from alignment at Contig_17:64227..66457+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2231bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )
ATGGGGACCAGCTTCAGCAAGAGCGCAGCGTCGCCCACCGCAGCAGCTGC TGCGGAGCCAGCAGCAGCAGACCTTGAAGTGACGCCAAGTGCGCCAACAA GCGCTGCGGCCGAGGCTGACGCTGCGCCAGTGCCAGCGCCCCTGCCGGCT GGTGCCGCACCGCGAAGGCGACGCGTCAGCGTGAGCGCAGAAGTGGATCA GTCCAAGGCCCCTGTGGTGAAAAAAGTGGTGGAAAAGACTGCGGATGTCA TTGATCAGGTCAGTAAGAGGGACTAGCAGCACACTTGGGGCTCCTGCAAC AGACCCTCCAATTCGTGTGAGCACTTAGCTCGTATGCGAACAAGGCACAC CACCGACCCTGGCTGGAGGTGCCGCTTGTACTACTCCTTTCTCAGGACAT GACTTGCAGTCGTGCTCTACAGGATGAGCTAGATGCCATAGATGGTACGT TCTGACTTTTTCAATGCTGGTCTTACCGCCCTCGCCACAGATCAAGGCCT CCATTGCCTCCAACTTCCTGCTCAACTCGCTGCCCGCCGAGCAACTCTCT GAAGTCATCGACGCGATGGAGGAGAAGGACTACGCCGCCGGCGCGTGCAT CATACAGGAGGGCCACGACGGCGACAACTTCTACGTCGTCGCCAGCGGCG AGTGCGAGGTGTTCATTGAGGGCAAGAACGACGGCGCGGCGCTGCGCACG ATACGCACCGGCGGGGGCTTTGGAGAGCTGGCGCTCATGTACAATGCGCC GCGTTCCGCGACCATCAAGGCGGTGGGGGATGTGAAGTGCTGGGCGCTGG ACAGGGTGACGTTCCGGCGCACGATCATGGCGGCGGGGCAGGCGCGCCGC AAGAAGTAAGAGCCCGTGGCTGGCTCAAAGAACAACTTGCTTTGTCCGCA GGCAGCCATGTAGTGTCTCTTTGAGTGTCCCTCACTGTATAGAGCGTCAA CTGCTTCAGGTGCGTGCAGGTATTTAATGGTGACTTTGCCATGATAGTTC CTCAGAAGTACGGCAGAAGCATACTACTCCAAATTGCTCTACAACTTCAC TTTTGCGCGTTGTGCATGGCGTCGGCAGGTACGAGCACTTCCTCAACCAG CTGGAGCTGCTGCGGCACCTGACGCCCGGCGACATTGCTCAGCTGGCCGA CGCAGTGGAGCCGTTGAGCTTTGAAGCGGGGGACACCATAATAGAGCAGG GGGACGCAGACAGGCAGAACTTCAAGTTCTACATTATTGAGGAGGGGGAG TCGCAGGCGTTCATTCGCAAGGATGGCAGGGACGTGCTGATGAGCACGCT GGGGGAGGGCGAGTACTTTGGGGAGAAGGCGCTGGTGGAGATGACGCCGC GCACCGCCACTGTCAAGGTGAGGGGCTGTATACTTCAACTTTTCACTTCA ACAATGTCGGATTGCTGCGCACTGCAACTGTCAAGGTGAGCGACGGCGAG TTTTGTGTCAGCATGTCTTATCAATGATGCCAGTATTGTTCTTGGTGCAA AGGATGTTTGCGATGAATATTGCACACAAGTGCAAGGCATGACGGCAGTG TCTTGCAGCTGGTCACACTGAGTCACAAGCTGGTGCCTATTGCGCACAGC TGGCCACACTTGATCACAAGCTGGTGCCTATAGCGCACGGCAGCAAGGTT TTTCAGCTCATTTGTTGGAACGGTACTGTAGTGACGACTCAGGCACATCA TCTGCAGATGCCTGCCAGGGGCGCTTTGTTGGGAGCTTGGTTTCTGTTGC TTGTGCATGCGTCAGTAGCGTGCATCCAGCTGACAGAGTGTGCTCGCTGC ATGTTCGGTAACATTGTTTGTAGGCTGTTAAAGCTACGTCATGATGCAAG GCTTACAATTGTGCGCATGCTTCACTGGCAGCCTCGGCTTTGATGATCCT ACTGCAGCTTTAGGCGTACACGCGCCAATCAACACTACTTGCACACGTCA CACACGCACTTGTATTCGTCATGGGATGACACTTTGTGGGCGCTTCTGAC ATGCGTATATGATATACTGTGTTTCATGCATGATTGTGCGTGTACTCTCA GGCTCTGAGCGCTGTCAAGTGCGCATGCCTGAGCATCGCTGCATTCGAGC GCCTCATGGGCTCGTGCATGCAGCTCAAGGAGCAGGCCAGCTCAGGGTAC CACGACGTAGATGAGGTGAGTCACTGGTTGAAGTTGTTGCAGTCAGATCG ACCGCTCTCCATCACAGTGAGCTGTGCTTGA
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Coding sequence (CDS) from alignment at Contig_17:64227..66457+

>mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1092bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )
ATGGGGACCAGCTTCAGCAAGAGCGCAGCGTCGCCCACCGCAGCAGCTGC
TGCGGAGCCAGCAGCAGCAGACCTTGAAGTGACGCCAAGTGCGCCAACAA
GCGCTGCGGCCGAGGCTGACGCTGCGCCAGTGCCAGCGCCCCTGCCGGCT
GGTGCCGCACCGCGAAGGCGACGCGTCAGCGTGAGCGCAGAAGTGGATCA
GTCCAAGGCCCCTGTGGTGAAAAAAGTGGTGGAAAAGACTGCGGATGTCA
TTGATCAGATCAAGGCCTCCATTGCCTCCAACTTCCTGCTCAACTCGCTG
CCCGCCGAGCAACTCTCTGAAGTCATCGACGCGATGGAGGAGAAGGACTA
CGCCGCCGGCGCGTGCATCATACAGGAGGGCCACGACGGCGACAACTTCT
ACGTCGTCGCCAGCGGCGAGTGCGAGGTGTTCATTGAGGGCAAGAACGAC
GGCGCGGCGCTGCGCACGATACGCACCGGCGGGGGCTTTGGAGAGCTGGC
GCTCATGTACAATGCGCCGCGTTCCGCGACCATCAAGGCGGTGGGGGATG
TGAAGTGCTGGGCGCTGGACAGGGTGACGTTCCGGCGCACGATCATGGCG
GCGGGGCAGGCGCGCCGCAAGAAGTACGAGCACTTCCTCAACCAGCTGGA
GCTGCTGCGGCACCTGACGCCCGGCGACATTGCTCAGCTGGCCGACGCAG
TGGAGCCGTTGAGCTTTGAAGCGGGGGACACCATAATAGAGCAGGGGGAC
GCAGACAGGCAGAACTTCAAGTTCTACATTATTGAGGAGGGGGAGTCGCA
GGCGTTCATTCGCAAGGATGGCAGGGACGTGCTGATGAGCACGCTGGGGG
AGGGCGAGTACTTTGGGGAGAAGGCGCTGGTGGAGATGACGCCGCGCACC
GCCACTGTCAAGGCTCTGAGCGCTGTCAAGTGCGCATGCCTGAGCATCGC
TGCATTCGAGCGCCTCATGGGCTCGTGCATGCAGCTCAAGGAGCAGGCCA
GCTCAGGGTACCACGACGTAGATGAGGTGAGTCACTGGTTGAAGTTGTTG
CAGTCAGATCGACCGCTCTCCATCACAGTGAGCTGTGCTTGA
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