mRNA_3316 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A835ZF94_9STRA (SOUL heme-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF94_9STRA) HSP 1 Score: 473 bits (1217), Expect = 2.150e-168 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1 Query: 1 GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET 735 GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET Sbjct: 1 GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET 245
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S4F7T4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7T4_CHRCT) HSP 1 Score: 90.5 bits (223), Expect = 1.550e-18 Identity = 63/193 (32.64%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 67 SGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVS-KLKELVEL-ALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639 S ++RRY + E E + + + AF+ LAKYIGV G+PEN AI+MTAPV+ P G M+FI+P++++S+AD P P N V L+++ + + +T+ G + V KLKEL L + K +K P K+ +A Y PP+TLP + EV + +P+ Sbjct: 23 SQAQLRRYKPCVAVETVCE------QMHGDSSSEAFRRLAKYIGVFGTPENGGSSAIAMTAPVVNSGMPXXXXXXX--------XXXDGKMAFILPARFQSVADAPSPTNPLVSLRQIESRVMAALTFSGSANEDSVHRKLKELQALLSEKGIAMKDGAAP-----KYEVARYNPPWTLPFLRTNEVLIPVPE 196
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A0L0G533_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G533_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 4.840e-18 Identity = 73/208 (35.10%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 79 IRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPEN-----EAGGA--ISMTAPVLMDR-------------QPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTW-YGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639 +RRYP + AEV S K G++ +AF+VLAKYIGV G+PEN E+G + I+MTAPV+ +PE+ E +M+F++P+KY +L + P+P N+ V+L+ VP+ V +T+ Y D K L+ D + L K Q KW LA Y PPFTLP + EVH+ + D Sbjct: 26 VRRYPPAVAAEV---SYKLGED-------NAFRVLAKYIGVFGTPENKSTTVESGESEPIAMTAPVITTADVNPERHLHDGFCKPEAXXXXXXXXXXPKNHEEKESMAFLLPAKY-TLQNAPRPNNESVRLRAVPSRCVAVLTYSYNTTMDEAREKKDRLLPTFTADGIT-ALEKGQ----KWTLARYNPPFTLPWMKTNEVHIEVQD 217
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A022RSB0_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RSB0_ERYGU) HSP 1 Score: 85.5 bits (210), Expect = 9.570e-17 Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVS-KLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHV 627 EIR+YP +VAE+ + + + D + F +LA YIG G +N +I+MT PV+ P S+ G TM FI+PS Y D P+P ++RV ++E +T+ G + V+ K+K+L E +D + LA Y PP+TLPP++K EV + Sbjct: 25 EIRQYPPAVVAEITYDPAQLKNDKD-----AGFPILANYIGAFGKAQNTKAESIAMTTPVITKAPPPSEXXXXXXXXXXXSGGELVTMGFILPSTYVKAEDAPRPVDERVVIREEEGKKYAVVTFSGVAGEKVVAEKVKKLTEFLERDGCKAA--------GDFVLARYNPPWTLPPFRKNEVRI 196
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: UPI001AD8C345 (heme-binding protein n=2 Tax=Roseibium aquae TaxID=1323746 RepID=UPI001AD8C345) HSP 1 Score: 84.3 bits (207), Expect = 7.030e-16 Identity = 69/207 (33.33%), Postives = 97/207 (46.86%), Query Frame = 1 Query: 22 ANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEA-TGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639 A GL ++ + IEIRRY EV + + AF +L YI S N AGG I+MTAPV + S+KISMT+PVI TPG+ ++F +P Y S A P+P + RVQL V V + + GR D + + +E + L +P A + PFTLPP+++ EV + L D Sbjct: 66 AFGLDQPSYTVLSAQEDIEIRRYDDMAAVEVSVRGSRSAATRE------AFGILFAYI----SGANTAGGDIAMTAPVRQEAS--SEKISMTAPVIQTPGQGDVWRVAFYLPRTY-SAATAPRPTDPRVQLITVEGKKVAAIQFSGRWTDRNFRRHQSRLEEYIDQQGLTATGQPV-------FAYFNAPFTLPPFRRNEVQIPLAD 252
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A835QT71_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QT71_VANPL) HSP 1 Score: 80.9 bits (198), Expect = 3.680e-15 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPED------NKWRLAGYTPPFTLPPWQKQEV 621 EIRRYP+ ++AEV + + G R + F +LAKYIG +G+P+N I+MTAPVL + + TM F++PSK+ D P+P ++RV++++ YG VR GV+ E+ A K L K D +++ LA Y PP+TLPP + EV Sbjct: 25 EIRRYPAAVLAEVTYDPAQLGG------RDAGFMILAKYIGAVGNPQNAGSCKIAMTAPVLTSAE-----------------QPAMTMQFVLPSKFVRAEDAPRPADERVRIRDQEGDRK-----YGVVRFSGVATDTEVAARAEK------LRKSLERDGYVVVGDRYVLARYNPPWTLPPLRTNEV 178
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S1D1Y1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1Y1_CYCTE) HSP 1 Score: 80.9 bits (198), Expect = 1.550e-14 Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI-----STPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVL 633 E+R+Y + E G D + F +LA+YIGV+G PENE +ISMTAPV+++R E Q++ ST M FI+P +Y S++ PKP N V +K +PA + + G + + + L+D ++ + K++ GY PPFT+P +++ EV V L Sbjct: 66 EVRKYGERIAIEAAY-----GNSQDD---GTPFMMLARYIGVVGKPENEGSESISMTAPVVIER--EQQQVGTXXXXXXXXXTSTDDGGVRKMQFILPKEYDSVSKAPKPTNPNVHVKNLPASVGVVHRFNGSFTEERSRMMATKLAQQLRDDGVE--MSDDEVLGKFQFWGYNPPFTIPYFRRNEVWVPL 244
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A845CDF5_9BACT (Heme-binding protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CDF5_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.660e-14 Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 61 RPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI------STPGEATG-TMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVL 633 + IEIR Y +F VAE + Q D+ +R F+ L +YI S N ISMTAPV++ +P IS PV S +A G TM+F++P Y++ P+P V+L++VPA V M + G +R + ++ L+ K D WR+AGY PP+TLPP ++ E+ V L Sbjct: 48 KDGAIEIREYEAFSVAETTVQ-----QPFDEAVRLG-FRRLFEYI----SGANRVAAEISMTAPVIL--KPGRITISAQVPVAPRANADSLDVDAGGWTMAFVLPDGYRART-APQPSETLVRLRDVPARRVAVMRYSGLLRQRTGEAQRRVLAAWLE-------AKGMAHDGDWRMAGYNPPWTLPPLRRNEIFVTL 225
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S3KZ23_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZ23_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.470e-14 Identity = 64/213 (30.05%), Postives = 102/213 (47.89%), Query Frame = 1 Query: 37 PEFVSLATRPSGI--EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI------STPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALK-DAVLKQLVKPQPEDNKW-----RLAGYTPPFTLPPWQKQEVHVVL 633 P F + T+ +G+ EIRRY + A+V+ + G + D + F++LA+YIGV G+PEN+ AISMTAPV+ + +T G+ M FI+P++Y S+ +PKP N V ++ +P + G D +++ + + L D V D W + GY PPFTLP +++ EV + L Sbjct: 13 PAFEVVWTQTAGLPYEIRRYGTRFAAQVQYAPD--GDKND----GTPFRLLARYIGVFGTPENQGETAISMTAPVVKQQTXXXXXXXXXXXXXXXXXSTATTGKDERIMQFILPAEYTSIGQIPKPTNPAVTIETLPPAMGAIHRYSGSFDDDKANEMAQSLAKQLSTDGVTVG-------DESWVTEHHQFWGYNPPFTLPMFRRNEVWLPL 212
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: UPI00053F4842 (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F4842) HSP 1 Score: 79.0 bits (193), Expect = 3.070e-14 Identity = 62/194 (31.96%), Postives = 94/194 (48.45%), Query Frame = 1 Query: 76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATG-------TMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSK---LKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHV 627 EIR+YP ++A++ + + + D F +LA YIGV+G +N ++MTAPV+ + G +M F++P+KYK+ D PKP ++RV +KE YG V+ GV+ +K+ VE LK A+ K VK E + LA Y PP+TLPP + EV + Sbjct: 25 EIRKYPPSVIAQITYDPSQMKDKKD-----GGFSILANYIGVVGKAQNTKAEKVAMTAPVITQDTGAASXXXXXXXXXXXXXXGDGEGEAKMVSMQFVLPAKYKTAEDAPKPLDERVVIKEEGEKK------YGVVKFSGVASDVVVKDKVE-KLKSALEKDGVKVVGE---YMLARYNPPWTLPPLRTNEVMI 203 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=738bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGGCGTACGGGCATCTCTACGGCCAATGGCCTCAGCCCAGAATTTGTGTCback to top protein sequence of jgi.p|Trimin1|161551 >Trimin1|161551|e_gw1.17.150.1 ID=Trimin1|161551|e_gw1.17.150.1|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=246bp GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADback to top mRNA from alignment at Contig_17:51751..52937+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1187bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_17:51751..52937+ >mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=738bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )back to top |