mRNA_3316 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161551
Unique NamemRNA_3316
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A835ZF94_9STRA (SOUL heme-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF94_9STRA)

HSP 1 Score: 473 bits (1217), Expect = 2.150e-168
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
Query:    1 GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET 735
            GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET
Sbjct:    1 GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET 245          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S4F7T4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7T4_CHRCT)

HSP 1 Score: 90.5 bits (223), Expect = 1.550e-18
Identity = 63/193 (32.64%), Postives = 97/193 (50.26%), Query Frame = 1
Query:   67 SGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVS-KLKELVEL-ALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639
            S  ++RRY   +  E   E      +   +  + AF+ LAKYIGV G+PEN    AI+MTAPV+    P                   G M+FI+P++++S+AD P P N  V L+++ +  +  +T+ G   +  V  KLKEL  L + K   +K    P     K+ +A Y PP+TLP  +  EV + +P+
Sbjct:   23 SQAQLRRYKPCVAVETVCE------QMHGDSSSEAFRRLAKYIGVFGTPENGGSSAIAMTAPVVNSGMPXXXXXXX--------XXXDGKMAFILPARFQSVADAPSPTNPLVSLRQIESRVMAALTFSGSANEDSVHRKLKELQALLSEKGIAMKDGAAP-----KYEVARYNPPWTLPFLRTNEVLIPVPE 196          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A0L0G533_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G533_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 4.840e-18
Identity = 73/208 (35.10%), Postives = 105/208 (50.48%), Query Frame = 1
Query:   79 IRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPEN-----EAGGA--ISMTAPVLMDR-------------QPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTW-YGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639
            +RRYP  + AEV   S K G++       +AF+VLAKYIGV G+PEN     E+G +  I+MTAPV+                +PE+              E   +M+F++P+KY +L + P+P N+ V+L+ VP+  V  +T+ Y    D    K   L+     D +   L K Q    KW LA Y PPFTLP  +  EVH+ + D
Sbjct:   26 VRRYPPAVAAEV---SYKLGED-------NAFRVLAKYIGVFGTPENKSTTVESGESEPIAMTAPVITTADVNPERHLHDGFCKPEAXXXXXXXXXXPKNHEEKESMAFLLPAKY-TLQNAPRPNNESVRLRAVPSRCVAVLTYSYNTTMDEAREKKDRLLPTFTADGIT-ALEKGQ----KWTLARYNPPFTLPWMKTNEVHIEVQD 217          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A022RSB0_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RSB0_ERYGU)

HSP 1 Score: 85.5 bits (210), Expect = 9.570e-17
Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 1
Query:   76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVS-KLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHV 627
            EIR+YP  +VAE+  +  +   + D     + F +LA YIG  G  +N    +I+MT PV+    P S+            G    TM FI+PS Y    D P+P ++RV ++E        +T+ G   +  V+ K+K+L E   +D               + LA Y PP+TLPP++K EV +
Sbjct:   25 EIRQYPPAVVAEITYDPAQLKNDKD-----AGFPILANYIGAFGKAQNTKAESIAMTTPVITKAPPPSEXXXXXXXXXXXSGGELVTMGFILPSTYVKAEDAPRPVDERVVIREEEGKKYAVVTFSGVAGEKVVAEKVKKLTEFLERDGCKAA--------GDFVLARYNPPWTLPPFRKNEVRI 196          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: UPI001AD8C345 (heme-binding protein n=2 Tax=Roseibium aquae TaxID=1323746 RepID=UPI001AD8C345)

HSP 1 Score: 84.3 bits (207), Expect = 7.030e-16
Identity = 69/207 (33.33%), Postives = 97/207 (46.86%), Query Frame = 1
Query:   22 ANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEA-TGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVLPD 639
            A GL     ++ +    IEIRRY      EV     +     +      AF +L  YI    S  N AGG I+MTAPV  +    S+KISMT+PVI TPG+     ++F +P  Y S A  P+P + RVQL  V    V  + + GR  D    + +  +E  +    L    +P         A +  PFTLPP+++ EV + L D
Sbjct:   66 AFGLDQPSYTVLSAQEDIEIRRYDDMAAVEVSVRGSRSAATRE------AFGILFAYI----SGANTAGGDIAMTAPVRQEAS--SEKISMTAPVIQTPGQGDVWRVAFYLPRTY-SAATAPRPTDPRVQLITVEGKKVAAIQFSGRWTDRNFRRHQSRLEEYIDQQGLTATGQPV-------FAYFNAPFTLPPFRRNEVQIPLAD 252          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A835QT71_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QT71_VANPL)

HSP 1 Score: 80.9 bits (198), Expect = 3.680e-15
Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1
Query:   76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPED------NKWRLAGYTPPFTLPPWQKQEV 621
            EIRRYP+ ++AEV  +  + G       R + F +LAKYIG +G+P+N     I+MTAPVL   +                 +   TM F++PSK+    D P+P ++RV++++           YG VR  GV+   E+   A K      L K    D      +++ LA Y PP+TLPP +  EV
Sbjct:   25 EIRRYPAAVLAEVTYDPAQLGG------RDAGFMILAKYIGAVGNPQNAGSCKIAMTAPVLTSAE-----------------QPAMTMQFVLPSKFVRAEDAPRPADERVRIRDQEGDRK-----YGVVRFSGVATDTEVAARAEK------LRKSLERDGYVVVGDRYVLARYNPPWTLPPLRTNEV 178          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S1D1Y1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1Y1_CYCTE)

HSP 1 Score: 80.9 bits (198), Expect = 1.550e-14
Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 1
Query:   76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI-----STPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVL 633
            E+R+Y   +  E        G   D     + F +LA+YIGV+G PENE   +ISMTAPV+++R  E Q++            ST       M FI+P +Y S++  PKP N  V +K +PA   +   + G   +     +   +   L+D  ++  +       K++  GY PPFT+P +++ EV V L
Sbjct:   66 EVRKYGERIAIEAAY-----GNSQDD---GTPFMMLARYIGVVGKPENEGSESISMTAPVVIER--EQQQVGTXXXXXXXXXTSTDDGGVRKMQFILPKEYDSVSKAPKPTNPNVHVKNLPASVGVVHRFNGSFTEERSRMMATKLAQQLRDDGVE--MSDDEVLGKFQFWGYNPPFTIPYFRRNEVWVPL 244          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A845CDF5_9BACT (Heme-binding protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CDF5_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 1.660e-14
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 1
Query:   61 RPSGIEIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI------STPGEATG-TMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHVVL 633
            +   IEIR Y +F VAE   +     Q  D+ +R   F+ L +YI    S  N     ISMTAPV++  +P    IS   PV       S   +A G TM+F++P  Y++    P+P    V+L++VPA  V  M + G +R       + ++   L+        K    D  WR+AGY PP+TLPP ++ E+ V L
Sbjct:   48 KDGAIEIREYEAFSVAETTVQ-----QPFDEAVRLG-FRRLFEYI----SGANRVAAEISMTAPVIL--KPGRITISAQVPVAPRANADSLDVDAGGWTMAFVLPDGYRART-APQPSETLVRLRDVPARRVAVMRYSGLLRQRTGEAQRRVLAAWLE-------AKGMAHDGDWRMAGYNPPWTLPPLRRNEIFVTL 225          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: A0A7S3KZ23_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZ23_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.470e-14
Identity = 64/213 (30.05%), Postives = 102/213 (47.89%), Query Frame = 1
Query:   37 PEFVSLATRPSGI--EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVI------STPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSKLKELVELALK-DAVLKQLVKPQPEDNKW-----RLAGYTPPFTLPPWQKQEVHVVL 633
            P F  + T+ +G+  EIRRY +   A+V+   +  G + D     + F++LA+YIGV G+PEN+   AISMTAPV+  +                    +T G+    M FI+P++Y S+  +PKP N  V ++ +P        + G   D   +++ + +   L  D V          D  W     +  GY PPFTLP +++ EV + L
Sbjct:   13 PAFEVVWTQTAGLPYEIRRYGTRFAAQVQYAPD--GDKND----GTPFRLLARYIGVFGTPENQGETAISMTAPVVKQQTXXXXXXXXXXXXXXXXXSTATTGKDERIMQFILPAEYTSIGQIPKPTNPAVTIETLPPAMGAIHRYSGSFDDDKANEMAQSLAKQLSTDGVTVG-------DESWVTEHHQFWGYNPPFTLPMFRRNEVWLPL 212          
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Match: UPI00053F4842 (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F4842)

HSP 1 Score: 79.0 bits (193), Expect = 3.070e-14
Identity = 62/194 (31.96%), Postives = 94/194 (48.45%), Query Frame = 1
Query:   76 EIRRYPSFLVAEVKAESEKEGQEADQEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTSPVISTPGEATG-------TMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTWYGRVRDGGVSK---LKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLPPWQKQEVHV 627
            EIR+YP  ++A++  +  +   + D       F +LA YIGV+G  +N     ++MTAPV+      +                 G       +M F++P+KYK+  D PKP ++RV +KE           YG V+  GV+    +K+ VE  LK A+ K  VK   E   + LA Y PP+TLPP +  EV +
Sbjct:   25 EIRKYPPSVIAQITYDPSQMKDKKD-----GGFSILANYIGVVGKAQNTKAEKVAMTAPVITQDTGAASXXXXXXXXXXXXXXGDGEGEAKMVSMQFVLPAKYKTAEDAPKPLDERVVIKEEGEKK------YGVVKFSGVASDVVVKDKVE-KLKSALEKDGVKVVGE---YMLARYNPPWTLPPLRTNEVMI 203          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161551 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF94_9STRA2.150e-168100.00SOUL heme-binding protein n=1 Tax=Tribonema minus ... [more]
A0A7S4F7T4_CHRCT1.550e-1832.64Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0L0G533_9EUKA4.840e-1835.10Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A022RSB0_ERYGU9.570e-1731.35Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
UPI001AD8C3457.030e-1633.33heme-binding protein n=2 Tax=Roseibium aquae TaxID... [more]
A0A835QT71_VANPL3.680e-1532.98Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A7S1D1Y1_CYCTE1.550e-1430.89Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A845CDF5_9BACT1.660e-1433.33Heme-binding protein n=1 Tax=Nitrospinae bacterium... [more]
A0A7S3KZ23_9STRA2.470e-1430.05Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
UPI00053F48423.070e-1431.96heme-binding-like protein At3g10130, chloroplastic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:51751..52937 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161551|e_gw1.17.150.1
DescriptionSOUL heme-binding protein
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28MKZ@1|root,2QU4S@2759|Eukaryota
Evalue2.97e-23
Seed ortholog130081.XP_005706202.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRegulatory factor, effector binding domain
Ec32 orthologEc-24_002220.1
TranscriptId161873
TrackFilteredModels1
ProteinId161551
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161551gene_3316Tribonema minus UTEX_B_3156 geneContig_17 51751..52937 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3316_1exon_3316_1Tribonema minus UTEX_B_3156 exonContig_17 51751..52179 +
exon_3316_2exon_3316_2Tribonema minus UTEX_B_3156 exonContig_17 52629..52937 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3316CDS_3316Tribonema minus UTEX_B_3156 CDSContig_17 51751..52179 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161551Trimin1|161551|e_gw1.17.150.1Tribonema minus UTEX_B_3156 polypeptideContig_17 51751..52937 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=738bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGGCGTACGGGCATCTCTACGGCCAATGGCCTCAGCCCAGAATTTGTGTC
CCTGGCCACGCGGCCAAGTGGCATAGAAATCAGGCGCTACCCCAGCTTTT
TGGTGGCAGAAGTGAAGGCGGAGTCCGAGAAGGAAGGGCAGGAAGCCGAC
CAGGAGATGCGAGCCTCTGCCTTCAAGGTGCTCGCCAAGTACATAGGAGT
CATGGGCTCGCCTGAGAATGAAGCTGGGGGGGCAATATCCATGACGGCGC
CGGTGCTGATGGACCGCCAGCCAGAGTCACAGAAGATCAGCATGACGTCG
CCCGTGATCAGCACGCCTGGCGAGGCCACGGGCACAATGAGCTTCATCAT
GCCGTCCAAGTACAAGTCGCTGGCGGATCTGCCCAAGCCCAAGAACGACA
GGGTGCAGCTGAAGGAGGTGCCAGCGATGACGGTGCTCTGCATGACGTGG
TACGGTCGCGTGCGCGACGGCGGCGTGTCCAAGCTCAAGGAGCTTGTTGA
ACTTGCACTGAAGGACGCAGTGCTCAAGCAGCTCGTCAAGCCCCAGCCAG
AGGACAACAAGTGGCGGCTAGCCGGCTACACGCCGCCTTTCACCCTGCCC
CCCTGGCAGAAGCAGGAGGTGCATGTTGTCTTGCCGGACGTCAGTGAAGA
TGAGGTCAAAGGGCTGCTGGAGAAGGAGACCAAGGACAGCGCACCAGCGG
AACAGTCGCAGCCGCCGGCAGCAGTTTCGGAAACTTAA
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protein sequence of jgi.p|Trimin1|161551

>Trimin1|161551|e_gw1.17.150.1 ID=Trimin1|161551|e_gw1.17.150.1|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=246bp
GRTGISTANGLSPEFVSLATRPSGIEIRRYPSFLVAEVKAESEKEGQEAD
QEMRASAFKVLAKYIGVMGSPENEAGGAISMTAPVLMDRQPESQKISMTS
PVISTPGEATGTMSFIMPSKYKSLADLPKPKNDRVQLKEVPAMTVLCMTW
YGRVRDGGVSKLKELVELALKDAVLKQLVKPQPEDNKWRLAGYTPPFTLP
PWQKQEVHVVLPDVSEDEVKGLLEKETKDSAPAEQSQPPAAVSET*
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mRNA from alignment at Contig_17:51751..52937+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1187bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )
GGGCGTACGGGCATCTCTACGGCCAATGGCCTCAGCCCAGAATTTGTGTC CCTGGCCACGCGGCCAAGTGGCATAGAAATCAGGCGCTACCCCAGCTTTT TGGTGGCAGAAGTGAAGGCGGAGTCCGAGAAGGAAGGGCAGGAAGCCGAC CAGGAGATGCGAGCCTCTGCCTTCAAGGTGCTCGCCAAGTACATAGGAGT CATGGGCTCGCCTGAGAATGAAGCTGGGGGGGCAATATCCATGACGGCGC CGGTGCTGATGGACCGCCAGCCAGAGTCACAGAAGATCAGCATGACGTCG CCCGTGATCAGCACGCCTGGCGAGGCCACGGGCACAATGAGCTTCATCAT GCCGTCCAAGTACAAGTCGCTGGCGGATCTGCCCAAGCCCAAGAACGACA GGGTGCAGCTGAAGGAGGTGCCAGCGATGGTGAGCACTGTTGATGTTGTT CTGTGTGCAGTAATCCTGTATACTCTGGCCTGCATGCGCATCTTGGGTAT GTAGCGCCTGTGAACCTCACTGCCTGGCTGTGTGCTCAAGCATGTAGCTA GTGGCTGCCTGATGCAGGCTGCGCACGTACAATGACATTTCAACGAGCAC CCTCGCTTGTGGAGCGCAAGCACGATTTTGTCCCTGTCATGAAAAAACAT TGAGGTTTTTGGACAAGCAGCACTTGGGAGCTGCTGGCAGACCACAAACA TGCTTTGAAGTGTCAGCTTCACTTGCCTGCTGCCCAAATTGCATACAGCC TTTCAATGATGCCCACATCAGGCAACTATACCAACGCAATCAATCGTATA AACACACAATCGCACTATGCACCTCAAACTGTTGACACTAAGAGCAGCAC CATGCCTTCTCGTCTGTGATCACGACAGACGGTGCTCTGCATGACGTGGT ACGGTCGCGTGCGCGACGGCGGCGTGTCCAAGCTCAAGGAGCTTGTTGAA CTTGCACTGAAGGACGCAGTGCTCAAGCAGCTCGTCAAGCCCCAGCCAGA GGACAACAAGTGGCGGCTAGCCGGCTACACGCCGCCTTTCACCCTGCCCC CCTGGCAGAAGCAGGAGGTGCATGTTGTCTTGCCGGACGTCAGTGAAGAT GAGGTCAAAGGGCTGCTGGAGAAGGAGACCAAGGACAGCGCACCAGCGGA ACAGTCGCAGCCGCCGGCAGCAGTTTCGGAAACTTAA
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Coding sequence (CDS) from alignment at Contig_17:51751..52937+

>mRNA_3316 ID=mRNA_3316|Name=jgi.p|Trimin1|161551|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=738bp|location=Sequence derived from alignment at Contig_17:51751..52937+ (Tribonema minus UTEX_B_3156 )
GGGCGTACGGGCATCTCTACGGCCAATGGCCTCAGCCCAGAATTTGTGTC
CCTGGCCACGCGGCCAAGTGGCATAGAAATCAGGCGCTACCCCAGCTTTT
TGGTGGCAGAAGTGAAGGCGGAGTCCGAGAAGGAAGGGCAGGAAGCCGAC
CAGGAGATGCGAGCCTCTGCCTTCAAGGTGCTCGCCAAGTACATAGGAGT
CATGGGCTCGCCTGAGAATGAAGCTGGGGGGGCAATATCCATGACGGCGC
CGGTGCTGATGGACCGCCAGCCAGAGTCACAGAAGATCAGCATGACGTCG
CCCGTGATCAGCACGCCTGGCGAGGCCACGGGCACAATGAGCTTCATCAT
GCCGTCCAAGTACAAGTCGCTGGCGGATCTGCCCAAGCCCAAGAACGACA
GGGTGCAGCTGAAGGAGGTGCCAGCGATGACGGTGCTCTGCATGACGTGG
TACGGTCGCGTGCGCGACGGCGGCGTGTCCAAGCTCAAGGAGCTTGTTGA
ACTTGCACTGAAGGACGCAGTGCTCAAGCAGCTCGTCAAGCCCCAGCCAG
AGGACAACAAGTGGCGGCTAGCCGGCTACACGCCGCCTTTCACCCTGCCC
CCCTGGCAGAAGCAGGAGGTGCATGTTGTCTTGCCGGACGTCAGTGAAGA
TGAGGTCAAAGGGCTGCTGGAGAAGGAGACCAAGGACAGCGCACCAGCGG
AACAGTCGCAGCCGCCGGCAGCAGTTTCGGAAACTTAA
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