mRNA_3271 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|160705
Unique Name	mRNA_3271
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A835YQD5_9STRA (Nitrate high affinity transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD5_9STRA)

HSP 1 Score: 882 bits (2279), Expect = 0.000e+0
Identity = 446/475 (93.89%), Postives = 461/475 (97.05%), Query Frame = 1

Query:    1 MSQ-QLPSTVWQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDVDGMDGKRAAP 1422
            MSQ QLPSTVW+KYD+YDLDVDPKQ+DRA +FKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVK DL+LT DDISNANIAALSSTVIAR+ILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDA GLA+CRFFVGFLGATFVANQAWSS MFGKNVVGRANATSAGWGNLGGGVTH+IMVGLYEGYKKIMSTE AWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIK+ AMVRKSSKKSA SA++SPNSWILALHYGCSFGVELIVFNVST+YFV  FGM LPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQN SLGGSIACLIAFAI MQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLI+IRGYDTLFTKAKDEMAA+DVDGM+GKRAAP
Sbjct:    1 MSQTQLPSTVWKKYDSYDLDVDPKQDDRATEFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKTDLKLTPDDISNANIAALSSTVIARMILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDATGLAVCRFFVGFLGATFVANQAWSSAMFGKNVVGRANATSAGWGNLGGGVTHLIMVGLYEGYKKIMSTEMAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKHSAMVRKSSKKSATSALQSPNSWILALHYGCSFGVELIVFNVSTTYFVKGFGMTLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNHSLGGSIACLIAFAICMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLINIRGYDTLFTKAKDEMAAVDVDGMEGKRAAP 475

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A835YTD5_9STRA (Nitrate high affinity transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD5_9STRA)

HSP 1 Score: 828 bits (2140), Expect = 3.470e-301
Identity = 412/473 (87.10%), Postives = 444/473 (93.87%), Query Frame = 1

Query:   10 QLPSTVWQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDVDGMDGKRAAPQA 1428
            QLPSTVW+KYD Y LDVDPKQ+DRAV+FKLSTFSRPHMRSFYISTF+FFMAFACWFSFAPL+A GT+K +L LTADD+SNANIAAL STVI R ILGPLCDAFGARIVMA LLFFGAIPTFFQGLVQDAQGLA+CRFFVGFLGATFVANQAWSS MFGK++VGRANATSAGWGNLGGGVTH+IMVGLYEGYK++   E AWRVSFIVPAA+VM+C+FA FL ADDCPKGNYNELIK+++MVRKSSKKSAESA+KSPNSWILALHYGCSFG+ELIVFNVSTSYFVN+FGMKL KAALVSAAFGFFNIFSRPGGG+LSDTMN++FGAGS GMRGR++   ILMLCSG MLLAFSFQ DS+GGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGM GAGGNVGAVCWSLIFRFGPAPNLCFRILSYI+LGAACT PLI+IRGYDTLFTKAKDEMAAIDVDG+D  R AP A
Sbjct:    3 QLPSTVWRKYDAYVLDVDPKQDDRAVEFKLSTFSRPHMRSFYISTFAFFMAFACWFSFAPLLAVGTIKANLSLTADDVSNANIAALCSTVIGRAILGPLCDAFGARIVMACLLFFGAIPTFFQGLVQDAQGLAVCRFFVGFLGATFVANQAWSSAMFGKSIVGRANATSAGWGNLGGGVTHLIMVGLYEGYKQVTDPETAWRVSFIVPAAVVMMCAFAVFLLADDCPKGNYNELIKHNSMVRKSSKKSAESALKSPNSWILALHYGCSFGIELIVFNVSTSYFVNSFGMKLSKAALVSAAFGFFNIFSRPGGGFLSDTMNRRFGAGSRGMRGRILTQLILMLCSGSMLLAFSFQEDSMGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMTGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIVLGAACTVPLINIRGYDTLFTKAKDEMAAIDVDGVDVNRTAPVA 475

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: D7FUS1_ECTSI (Nitrate/nitrite transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUS1_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 8.230e-159
Identity = 236/454 (51.98%), Postives = 312/454 (68.72%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP-APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAI 1386
            W+KYDTYD+ +DPKQ+D+A   KL +F RPHMR+F+ + F FFMAF  WF+FAPL+ E  +K DL +T +++ NANI+++SST+++R ++GPLCD FGARI  + LL  G IPTFF GLV  A  +AI RFF+G +GATFV  Q W+S +F K  VG ANATSAGWGNLGGGVT I MVG++  +K    +E AWR+SF+VPAAIV   +      ADDCPKGNY EL  + AM RKSS  S +    + NSWI+   Y   FGVEL V NV+ +YF + FG+   KA +V++ FG  N+F+R  GG  SD + +KFGAG TGMRGR    +  ++  GC L  F++ N +LG +I  LI F++ +Q   G++Y IVPY+ P+ATGAVSG+ GAGGN GAV W LIFRFGP +    FRI++ I++  +CT PL+ IRGY + F   K E  +I
Sbjct:    4 WKKYDTYDVPIDPKQQDKATTLKLYSFRRPHMRAFHFAWFGFFMAFVSWFAFAPLMKE--IKADLGMTKNEVYNANISSVSSTILSRFVVGPLCDTFGARITSSTLLLMGCIPTFFAGLVNSATDVAIIRFFIGVMGATFVCTQYWTSQVFAKEFVGTANATSAGWGNLGGGVTQIFMVGIWNAFKTSYDSETAWRLSFLVPAAIVFCVAIGQVFLADDCPKGNYKELEAHGAMTRKSSAVSFKKGYSNVNSWIMFAQYAACFGVELTVNNVAANYFSDEFGLSTSKAGMVASLFGLMNLFARSVGGIWSDFLYRKFGAGVTGMRGRFFAQWSALVWEGCFLFLFTYMN-TLGAAIPILILFSVGVQMSEGTSYGIVPYIVPDATGAVSGIVGAGGNFGAVMWGLIFRFGPTSERSVFRIIAAIVVALSCTTPLMKIRGYASCFGAPKGEPDSI 454

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A836CM93_9STRA (Nitrate high affinity transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM93_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 2.650e-154
Identity = 241/461 (52.28%), Postives = 310/461 (67.25%), Query Frame = 1

Query:   16 PSTVWQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP-APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAK-DEMAAIDV 1392
            PST WQKY+TY L  DPKQ DRA   +L    RPHM++F++ST ++F AF  WFSFAPL+ E  VKKDL L+  D+ NANI+A+S+T++ARL++GPL DA GAR   + LL  G++P F  GLV  A  LA+ RFF+G LGA FV NQ  +S MF + V+G A+A S GWGNLGGGV  I MV ++ G K+ +  E AWRVSFI PAA V++ S       DD PKG Y ELI + AMVRKSS K+A    +  NSWIL +HY    GVEL   N   +YF + FG+   KA L++  FG   IF+R  GG LSD+  + FG GSTGMRGR+IV    +   G  L+ FS  N SLG +IA L +FA+ +Q   GST+ IVP V PEATGAVSG+ GAGGN+GA+ + L+FRFGP AP  CF +L +I+LG A   PL+ ++G+D +FT+AK +E  AID+
Sbjct:    7 PSTTWQKYETYSLPTDPKQGDRATVLRLRNGRRPHMQTFWVSTLAWFAAFTAWFSFAPLMPE--VKKDLGLSTSDVYNANISAVSATLVARLVVGPLADALGARTTFSLLLAAGSVPVFCSGLVDSAGSLALVRFFIGVLGACFVCNQILASQMFSREVIGTASAVSGGWGNLGGGVCQIAMVLIWSGLKQGLPHETAWRVSFIFPAAFVLIMSVVVLTRCDDSPKGQYKELIAHGAMVRKSSAKAASQGYRDYNSWILTIHYAACLGVELTTLNTCATYFDDKFGLGTTKAGLIATVFGLMQIFTRASGGLLSDSAFKHFGGGSTGMRGRIIVQMCTLTAEGVCLVIFSRMN-SLGSAIALLTSFAVGVQMSEGSTFGIVPSVCPEATGAVSGIVGAGGNLGAIAFGLLFRFGPSAPETCFLLLGFIVLGCAALTPLLRLKGHDGMFTRAKVEEPGAIDI 464

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: D7FUR8_ECTSI (Nitrate high affinity transporter n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FUR8_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 2.320e-153
Identity = 233/454 (51.32%), Postives = 304/454 (66.96%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRF-GPAPNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAI 1386
            W+KYD+YD+ +DPKQ+D+A  FKL +F RPHMR+F+ + F FFMAF  WF+FAPL+ E  +K DL +T  ++ NANI+++SSTV++R I+GPLCD FGARI+ + LL  G IPT F GLV  A  +AI RFF+G +GATFV  Q WSS +F K  VG ANAT+ GWGNLGGGVT I MV ++  +K    +E AWR+SF+VPAAIV   +      ADD PKGNY EL  + AM RKSS  S +    + NSW++ L Y   FGVEL V NV+ +YF + F +   KA LV++ FG  N+F+R  GG  SD +  KFG G TGMRGR    +  +L  GC L  F+F N  LG +I  LI F++ +Q   G++Y IVPY+ P+ATGAVSG+ GAGGN GAV W LIFRF G +    FRI++  ++G +C  PL+ IRGY T F   + E  +I
Sbjct:    4 WKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMRAFHFAWFGFFMAFVSWFAFAPLMKE--IKADLGMTKLEVYNANISSVSSTVLSRFIVGPLCDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAIIRFFIGVMGATFVCTQFWSSQIFAKEFVGTANATTGGWGNLGGGVTQIFMVAIWNAFKTSYDSETAWRLSFLVPAAIVFCVAVGQLFLADDSPKGNYKELEAHGAMTRKSSAVSFKKGYMNVNSWLMFLQYAACFGVELTVNNVAANYFSDEFDLSTSKAGLVASLFGLMNLFARSLGGIWSDFLFAKFGGGVTGMRGRFFAQWTALLWEGCFLFLFTFMNQ-LGAAIPVLILFSVGVQMAEGTSYGIVPYIVPDATGAVSGIVGAGGNFGAVMWGLIFRFAGRSERAVFRIIAAFVVGLSCLTPLLKIRGYATCFAAPQGEPDSI 454

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A812ST29_9DINO (Nitrate/nitrite transporter n=2 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812ST29_9DINO)

HSP 1 Score: 437 bits (1123), Expect = 1.170e-146
Identity = 228/457 (49.89%), Postives = 307/457 (67.18%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP--APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDV 1392
            W+KY+TYD +VDPKQ DRA + KL +F RPHMR F+ + F FF+AFA WF+FAPL+ +  +KKDL LT D++ NANIA+++STV+ R  +GPLCD FG R + + LL FGAIP FF GLV +A GL I RF +G LGATFV  QAW S +F K +VG ANA + GWGNLGGG   ++MVG++  ++     EEAWR+SFIVP  +        + F+DD PKGN+ EL +   M R+SSKKS +      N+WIL + Y   FGVE+ + N+   Y    + + +  A L+++ FG  N+F+R  GG LSD + Q FGAG+TGMRGR+    I ++  G MLL F+ + DSLG +I  L+ F++ +Q   G T+ IVPYV P ATGAVSG+ GAGGNVGAVCW L+FRFGP  A ++ F IL +I++ +A     + I+G+D   TKAK E  ++DV
Sbjct:   28 WKKYETYDCEVDPKQGDRATKIKLLSFKRPHMRGFHFAWFGFFIAFASWFAFAPLMPQ--IKKDLGLTKDEMYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNATGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGICMYFFSDDSPKGNFKELEQRGTMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQWFGAGTTGMRGRIYAQSISLVWEGIMLLIFT-KMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLMFRFGPSEADDVLF-ILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDV 480

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A812SSL6_9DINO (Nitrate/nitrite transporter n=3 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SSL6_9DINO)

HSP 1 Score: 434 bits (1117), Expect = 7.330e-145
Identity = 227/457 (49.67%), Postives = 305/457 (66.74%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP--APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDV 1392
            W+KY+TY  +VDPKQ DRA + KL +F RPHMR F+ + F FFMAF+ WF+FAPL+ +  +KKDL LT D++ NANIA+++STV+ R  +GPLCD FG R + + LL FGAIP FF GLV +  GL I RF +G LGATFV  QAW S +F K +VG ANA + GWGNLGGG   ++MVG++  ++     EEAWR+SFIVP  +        + F+DD PKGN+ EL +   M RKSSKKS +      N+WIL + Y   FGVE+ + N+   Y    + + +  A L+++ FG  N+F+R  GG LSD + Q FGAG+TGMRGR+    I ++  G MLL F+ + DSLG +I  L+ F++ +Q   G T+ IVPYV P ATGAVSG+ GAGGNVGAVCW L+FRFGP  A ++ F IL +I++ +A     + I+G+D   TKAK E  ++DV
Sbjct:   91 WKKYETYYCEVDPKQGDRATEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQ--IKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGICMYFFSDDSPKGNFKELEQRGTMERKSSKKSFQEGFCQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQWFGAGTTGMRGRIYAQSISLVWEGIMLLIFT-KMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLMFRFGPSEADDVLF-ILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDV 543

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A812SYP8_9DINO (NRT2.5 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SYP8_9DINO)

HSP 1 Score: 438 bits (1126), Expect = 9.020e-145
Identity = 231/468 (49.36%), Postives = 311/468 (66.45%), Query Frame = 1

Query:   10 QLPST-----VWQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP--APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDV 1392
            +LP+T      W+KY+TY  +VDPKQ DR  + KL +F RPHMR F+ + F FFMAF+ WF+FAPL+ +  +KKDL LT D++ NANIA+++STV+ R  +GPLCD FG R + + LL FGAIP FF GLV +  GL I RF +G LGATFV  QAW S +F K +VG ANA + GWGNLGGG   ++MVG++  ++     EEAWR+SFIVP  +      + + F+DD PKGN+ EL +  AM R+SSKKS +      N+WIL + Y   FGVE+ + N+   Y    + + +  A L+++ FG  N+F+R  GG LSD + Q FGAG+TGMRGR+    I ++  G MLL F+ Q DSLG +I  L+ F++ +Q   G T+ IVPYV P ATGAVSG+ GAGGNVGAVCW LIFRFGP  A ++ F IL +I++ +A     + I+G+D   TKAK E  ++DV
Sbjct:  187 ELPTTNKHEGSWKKYETYYCEVDPKQGDRTTEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQ--IKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGISMYFFSDDSPKGNFKELEQRGAMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAGYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQLFGAGTTGMRGRIYAQSISLVWEGIMLLIFT-QMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLIFRFGPSEADDVLF-ILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDV 650

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BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A812T2A0_9DINO (NRT2.5 protein n=3 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812T2A0_9DINO)

HSP 1 Score: 435 bits (1119), Expect = 1.060e-137
Identity = 227/457 (49.67%), Postives = 306/457 (66.96%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMSTEEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGP--APNLCFRILSYIILGAACTAPLISIRGYDTLFTKAKDEMAAIDV 1392
            W+KY+TY  +VDPKQ DRA + KL +F RPHMR F+ + F FFMAF+ WF+FAPL+ +  +KKDL LT D++ NANIA+++STV+ R  +GPLCD FG R + + LL FGAIP FF GLV +  GL I RF +G LGATFV  QAW S +F K +VG ANA + GWGNLGGG   ++MVG++  ++     EEAWR+SFIVP  +      + + F+DD PKGN+ EL +   M R+SSKKS +      N+WIL + Y   FGVE+ + N+   Y    + + +  A L+++ FG  N+F+R  GG LSD + Q FGAG+TGMRGR+    I ++  G MLL F+ + DSLG +I  L+ F++ +Q   G T+ IVPYV P ATGAVSG+ GAGGNVGAVCW LIFRFGP  A ++ F IL +I++ +A     + I+G+D   TKAK E  ++DV
Sbjct:  759 WKKYETYYCEVDPKQGDRATEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQ--IKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGISMYFFSDDSPKGNFKELEQRGTMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQLFGAGTTGMRGRIYAQSISLVWEGIMLLIFT-KMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLIFRFGPSEADDVLF-ILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDV 1211

[Close]

BLAST of jgi.p|Trimin1|160705 vs. uniprot
Match: A0A7S4AMK6_9STRA (Nitrate/nitrite transporter n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMK6_9STRA)

HSP 1 Score: 365 bits (938), Expect = 9.030e-119
Identity = 205/462 (44.37%), Postives = 287/462 (62.12%), Query Frame = 1

Query:   28 WQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFVANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIM-VGLYEGYKKIMSTE--EAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKKSAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLISIRGYDTLF----TKAKDEMAAIDV 1392
            W+KY  Y ++VDP Q+D+A + KL +F+RPHMR+F+ S + FF+AF  WF+ APL++E  +K DL LT  +I  ++I  ++ T+  R ILGP CD FGARI MA +L F +IPT   G V+ A GLA+ R F+G  G TFV  Q W+S MF K VVG ANA   GWGNLGGGVT ++M   L+  +K     +  +AWR   IVPA +        +  +DD PKGNYNEL K+  M   S+  S      + N+WIL + Y C FGVEL + N +  YF + F +    AA +++ FGF N+F+R  GG++SD  NQ  G     MRGR+  H + ++  G ++L F+ Q +SLG +IA ++ F++ +QA  G++Y IVPY+ P ATGA+SG+ GAGGN GAVC+ L FR      L F+I+ Y ILG+A  + +I I+G+  LF       +DE A + V
Sbjct:   14 WKKYTEYFVEVDPDQDDKAKEIKLCSFARPHMRAFHCSWWGFFIAFFIWFAIAPLLSE--IKVDLGLTKQEIWTSSIVGVAGTIFMRFILGPACDKFGARIPMAAVLCFASIPTALTGTVKGATGLAVLRLFIGSAGGTFVMCQFWASRMFVKEVVGTANALCGGWGNLGGGVTQLVMGSALFPLFKSFFDGDASKAWRYVSIVPAVVAFGTGVLIYFISDDAPKGNYNELKKHGQMSEVSAAASFRQGAFNFNTWILFIQYACCFGVELTMNNAAALYFKDKFLLTTESAAAIASIFGFMNLFARGLGGFMSDKGNQYLG-----MRGRIASHTLCLIIEGVLVLVFA-QTESLGAAIAVMVFFSLFVQAAEGTSYGIVPYIDPPATGAISGIVGAGGNTGAVCFGLGFR-NLEYKLAFQIMGYSILGSALLSAIIMIKGHSGLFCGKDAPKEDEPAVLAV 466

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|160705 vs. uniprot

BLAST of jgi.p|Trimin1|160705 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YQD5_9STRA	0.000e+0	93.89	Nitrate high affinity transporter n=2 Tax=Tribonem...	[more]
A0A835YTD5_9STRA	3.470e-301	87.10	Nitrate high affinity transporter n=1 Tax=Tribonem...	[more]
D7FUS1_ECTSI	8.230e-159	51.98	Nitrate/nitrite transporter n=2 Tax=Ectocarpus Tax...	[more]
A0A836CM93_9STRA	2.650e-154	52.28	Nitrate high affinity transporter n=1 Tax=Tribonem...	[more]
D7FUR8_ECTSI	2.320e-153	51.32	Nitrate high affinity transporter n=4 Tax=Ectocarp...	[more]
A0A812ST29_9DINO	1.170e-146	49.89	Nitrate/nitrite transporter n=2 Tax=Symbiodinium n...	[more]
A0A812SSL6_9DINO	7.330e-145	49.67	Nitrate/nitrite transporter n=3 Tax=Symbiodinium n...	[more]
A0A812SYP8_9DINO	9.020e-145	49.36	NRT2.5 protein n=1 Tax=Symbiodinium natans TaxID=8...	[more]
A0A812T2A0_9DINO	1.060e-137	49.67	NRT2.5 protein n=3 Tax=Symbiodinium natans TaxID=8...	[more]
A0A7S4AMK6_9STRA	9.030e-119	44.37	Nitrate/nitrite transporter n=2 Tax=Pseudo-nitzsch...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_14	contig	Contig_14:1265979..1268097 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|160705\|e_gw1.14.172.1
KEGG TC	2.A.1.8
BRITE	ko00000,ko00001,ko00002,ko02000
KEGG Module	M00615
KEGG Pathway	ko00910,map00910
KEGG ko	ko:K02575
GOs	GO:0000325,GO:0001101,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0008150,GO:0008509,GO:0009507,GO:0009536,GO:0009628,GO:0009705,GO:0009791,GO:0009987,GO:0010035,GO:0010167,GO:0015075,GO:0015103,GO:0015112,GO:0015267,GO:0015291,GO:0015318,GO:0015513,GO:0015698,GO:0015706,GO:0015707,GO:0016020,GO:0022622,GO:0022803,GO:0022804,GO:0022832,GO:0022836,GO:0022857,GO:0031090,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071229,GO:0071241,GO:0071249,GO:0071705,GO:0071944,GO:0080167,GO:0090696,GO:0098588,GO:0098656,GO:0098805,GO:0099402,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1990351
Preferred name	NRT2.2
Description	cellular response to nitrate
COG category	P
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG2223@1\|root,2QPIC@2759\|Eukaryota
Evalue	1.35e-159
Seed ortholog	2880.D7FUS1
Hectar predicted targeting category	other localisation
TranscriptId	161027
Track	FilteredModels1
ProteinId	160705

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160705	gene_3271	Tribonema minus UTEX_B_3156	gene	Contig_14 1265979..1268097 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3271_1	exon_3271_1	Tribonema minus UTEX_B_3156	exon	Contig_14 1265979..1266795 +
exon_3271_2	exon_3271_2	Tribonema minus UTEX_B_3156	exon	Contig_14 1267475..1268097 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3271	CDS_3271	Tribonema minus UTEX_B_3156	CDS	Contig_14 1265979..1266795 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160705	Trimin1\|160705\|e_gw1.14.172.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_14 1265979..1268097 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_14:1265979..1268097+
coding sequence from alignment at Contig_14:1265979..1268097+

spliced messenger RNA

>mRNA_3271 ID=mRNA_3271|Name=jgi.p|Trimin1|160705|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1440bp|location=Sequence derived from alignment at Contig_14:1265979..1268097+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGCAGCAGCTGCCCTCCACCGTCTGGCAGAAGTACGACACCTATGA
CCTGGATGTCGACCCCAAGCAGGAGGACCGCGCCGTGCAGTTCAAGCTCA
GCACCTTCAGCCGCCCCCACATGCGCTCCTTCTACATCTCCACCTTCTCC
TTCTTCATGGCGTTCGCGTGCTGGTTCAGCTTCGCGCCGCTTGTCGCCGA
GGGCACCGTCAAGAAGGACCTCCAGCTGACCGCCGACGACATCTCCAACG
CCAACATCGCAGCGCTCAGCTCCACCGTCATTGCGCGCCTCATCCTCGGC
CCCCTCTGCGACGCCTTCGGGGCGCGCATCGTCATGGCCGGCCTGCTCTT
CTTCGGCGCCATCCCCACCTTCTTCCAGGGCCTCGTGCAGGACGCGCAGG
GACTCGCCATCTGCCGCTTTTTCGTGGGCTTCCTCGGCGCGACGTTCGTG
GCCAACCAGGCCTGGTCCTCGACCATGTTCGGCAAGAACGTGGTCGGGCG
TGCCAACGCCACCTCCGCAGGCTGGGGCAACCTCGGCGGCGGCGTCACTC
ACATCATCATGGTCGGCCTGTACGAGGGCTACAAGAAGATCATGAGCACA
GAGGAGGCGTGGCGCGTGAGCTTCATCGTGCCCGCCGCCATCGTCATGCT
GTGCTCCTTCGCGACCTTCCTGTTTGCCGACGACTGCCCGAAGGGAAACT
ACAACGAGCTTATTAAGAACCACGCCATGGTGCGCAAGTCTTCTAAGAAG
TCCGCCGAGTCTGCCGTCAAGTCGCCCAACTCGTGGATCCTCGCGCTGCA
CTACGGCTGCTCCTTCGGCGTCGAGCTCATCGTGTTCAACGTGTCCACCT
CCTACTTTGTCAACACCTTCGGCATGAAGCTCCCCAAGGCAGCGCTCGTC
TCTGCAGCTTTCGGCTTCTTCAACATCTTCTCGCGCCCCGGCGGCGGGTG
GCTCTCCGACACCATGAACCAGAAGTTCGGCGCGGGCAGCACCGGCATGC
GCGGCCGCCTCATCGTCCACTTCATCCTCATGCTCTGCTCGGGCTGCATG
CTGCTGGCCTTCTCCTTCCAGAACGACTCGCTCGGCGGCTCCATCGCGTG
CCTCATCGCCTTCGCCATCGCCATGCAAGCCGTCAACGGCTCCACCTACT
CCATCGTCCCCTACGTCGCGCCCGAGGCGACGGGCGCGGTCAGCGGCATG
GCCGGCGCCGGCGGCAACGTGGGCGCCGTCTGCTGGTCCCTCATCTTCCG
CTTCGGCCCCGCACCCAACCTCTGCTTCCGCATCCTCTCTTACATCATCC
TGGGGGCGGCGTGCACCGCGCCGCTCATCAGCATCCGCGGCTACGACACG
CTCTTCACCAAGGCCAAGGACGAGATGGCGGCGATCGACGTCGACGGCAT
GGACGGCAAGCGCGCGGCGCCGCAGGCGGAGCGCATCTGA

protein sequence of jgi.p|Trimin1|160705

>Trimin1|160705|e_gw1.14.172.1 ID=Trimin1|160705|e_gw1.14.172.1|Name=jgi.p|Trimin1|160705|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=480bp
MSQQLPSTVWQKYDTYDLDVDPKQEDRAVQFKLSTFSRPHMRSFYISTFS
FFMAFACWFSFAPLVAEGTVKKDLQLTADDISNANIAALSSTVIARLILG
PLCDAFGARIVMAGLLFFGAIPTFFQGLVQDAQGLAICRFFVGFLGATFV
ANQAWSSTMFGKNVVGRANATSAGWGNLGGGVTHIIMVGLYEGYKKIMST
EEAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKNHAMVRKSSKK
SAESAVKSPNSWILALHYGCSFGVELIVFNVSTSYFVNTFGMKLPKAALV
SAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCM
LLAFSFQNDSLGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGM
AGAGGNVGAVCWSLIFRFGPAPNLCFRILSYIILGAACTAPLISIRGYDT
LFTKAKDEMAAIDVDGMDGKRAAPQAERI*

mRNA from alignment at Contig_14:1265979..1268097+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3271 ID=mRNA_3271|Name=jgi.p|Trimin1|160705|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2119bp|location=Sequence derived from alignment at Contig_14:1265979..1268097+ (Tribonema minus UTEX_B_3156 )
ATGTCGCAGCAGCTGCCCTCCACCGTCTGGCAGAAGTACGACACCTATGA
CCTGGATGTCGACCCCAAGCAGGAGGACCGCGCCGTGCAGTTCAAGCTCA
GCACCTTCAGCCGCCCCCACATGCGCTCCTTCTACATCTCCACCTTCTCC
TTCTTCATGGCGTTCGCGTGCTGGTTCAGCTTCGCGCCGCTTGTCGCCGA
GGGCACCGTCAAGAAGGACCTCCAGCTGACCGCCGACGACATCTCCAACG
CCAACATCGCAGCGCTCAGCTCCACCGTCATTGCGCGCCTCATCCTCGGC
CCCCTCTGCGACGCCTTCGGGGCGCGCATCGTCATGGCCGGCCTGCTCTT
CTTCGGCGCCATCCCCACCTTCTTCCAGGGCCTCGTGCAGGACGCGCAGG
GACTCGCCATCTGCCGCTTTTTCGTGGGCTTCCTCGGCGCGACGTTCGTG
GCCAACCAGGCCTGGTCCTCGACCATGTTCGGCAAGAACGTGGTCGGGCG
TGCCAACGCCACCTCCGCAGGCTGGGGCAACCTCGGCGGCGGCGTCACTC
ACATCATCATGGTCGGCCTGTACGAGGGCTACAAGAAGATCATGAGCACA
GAGGAGGCGTGGCGCGTGAGCTTCATCGTGCCCGCCGCCATCGTCATGCT
GTGCTCCTTCGCGACCTTCCTGTTTGCCGACGACTGCCCGAAGGGAAACT
ACAACGAGCTTATTAAGAACCACGCCATGGTGCGCAAGTCTTCTAAGAAG
TCCGCCGAGTCTGCCGTCAAGTCGCCCAACTCGTGGATCCTCGCGCTGCA
CTACGGCTGCTCCTTCGGTGAGTCTCTCAGCTGCCGCACTGCACCATAGC
AAAGTAAATTTGTTTGCTTTGATGTGGTAGTAACTTATTCTGGCATTTAC
ATTTTGTGCGCGAGTGGCCACAGTCGGCAGCATCTTGCCATAGTCCTCAT
TTTAAACCTGGCTTAGCAGCACATTGTTTGTGGGGGGGAAGCAAGGTGTG
TAGCGCAGCTGTTTCATGCACCTCACGCAGCTCAACACGGCACAGTTTCA
TAGTTTGTGCGTTTGGACCGCTTGTACGCGCTAGGCGTTTCTTTCAGCTT
TTGTACACACAGGCTATCGGATAGAATTTTGTGTAGCGCTTCTTCAGAAG
ACTCAGCTTTGGTGCTGAGAGTCCTCTTCGTGTCACATCGCACTACACAT
GCACTGCTTCTGTATAGCTACCAGAGGTATCAGATAGATCTGATCATGTT
CACCACGATTTCTGTGTAAGCAGACGCTTTGAGCGTCTCCTCTGGCTTTC
TTTTTGTCACAAGACAACGCCCTGCTGCCCTGATTTCATGCACTGGCTCT
TGTGCCCACTGGCTTTCTTTTTGTCACAAGACAACGCCCTGCTGCCCTGA
TTTCATGCACTGGCTCTTGTGCCCACCATGTACCTTCAACAACGATAATA
ACACTTTTTGTCTCCCTCTCCCATTCTCCCCTTGCCTTACCCCCAGGCGT
CGAGCTCATCGTGTTCAACGTGTCCACCTCCTACTTTGTCAACACCTTCG
GCATGAAGCTCCCCAAGGCAGCGCTCGTCTCTGCAGCTTTCGGCTTCTTC
AACATCTTCTCGCGCCCCGGCGGCGGGTGGCTCTCCGACACCATGAACCA
GAAGTTCGGCGCGGGCAGCACCGGCATGCGCGGCCGCCTCATCGTCCACT
TCATCCTCATGCTCTGCTCGGGCTGCATGCTGCTGGCCTTCTCCTTCCAG
AACGACTCGCTCGGCGGCTCCATCGCGTGCCTCATCGCCTTCGCCATCGC
CATGCAAGCCGTCAACGGCTCCACCTACTCCATCGTCCCCTACGTCGCGC
CCGAGGCGACGGGCGCGGTCAGCGGCATGGCCGGCGCCGGCGGCAACGTG
GGCGCCGTCTGCTGGTCCCTCATCTTCCGCTTCGGCCCCGCACCCAACCT
CTGCTTCCGCATCCTCTCTTACATCATCCTGGGGGCGGCGTGCACCGCGC
CGCTCATCAGCATCCGCGGCTACGACACGCTCTTCACCAAGGCCAAGGAC
GAGATGGCGGCGATCGACGTCGACGGCATGGACGGCAAGCGCGCGGCGCC
GCAGGCGGAGCGCATCTGA

Coding sequence (CDS) from alignment at Contig_14:1265979..1268097+

>mRNA_3271 ID=mRNA_3271|Name=jgi.p|Trimin1|160705|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1440bp|location=Sequence derived from alignment at Contig_14:1265979..1268097+ (Tribonema minus UTEX_B_3156 )
ATGTCGCAGCAGCTGCCCTCCACCGTCTGGCAGAAGTACGACACCTATGA
CCTGGATGTCGACCCCAAGCAGGAGGACCGCGCCGTGCAGTTCAAGCTCA
GCACCTTCAGCCGCCCCCACATGCGCTCCTTCTACATCTCCACCTTCTCC
TTCTTCATGGCGTTCGCGTGCTGGTTCAGCTTCGCGCCGCTTGTCGCCGA
GGGCACCGTCAAGAAGGACCTCCAGCTGACCGCCGACGACATCTCCAACG
CCAACATCGCAGCGCTCAGCTCCACCGTCATTGCGCGCCTCATCCTCGGC
CCCCTCTGCGACGCCTTCGGGGCGCGCATCGTCATGGCCGGCCTGCTCTT
CTTCGGCGCCATCCCCACCTTCTTCCAGGGCCTCGTGCAGGACGCGCAGG
GACTCGCCATCTGCCGCTTTTTCGTGGGCTTCCTCGGCGCGACGTTCGTG
GCCAACCAGGCCTGGTCCTCGACCATGTTCGGCAAGAACGTGGTCGGGCG
TGCCAACGCCACCTCCGCAGGCTGGGGCAACCTCGGCGGCGGCGTCACTC
ACATCATCATGGTCGGCCTGTACGAGGGCTACAAGAAGATCATGAGCACA
GAGGAGGCGTGGCGCGTGAGCTTCATCGTGCCCGCCGCCATCGTCATGCT
GTGCTCCTTCGCGACCTTCCTGTTTGCCGACGACTGCCCGAAGGGAAACT
ACAACGAGCTTATTAAGAACCACGCCATGGTGCGCAAGTCTTCTAAGAAG
TCCGCCGAGTCTGCCGTCAAGTCGCCCAACTCGTGGATCCTCGCGCTGCA
CTACGGCTGCTCCTTCGGCGTCGAGCTCATCGTGTTCAACGTGTCCACCT
CCTACTTTGTCAACACCTTCGGCATGAAGCTCCCCAAGGCAGCGCTCGTC
TCTGCAGCTTTCGGCTTCTTCAACATCTTCTCGCGCCCCGGCGGCGGGTG
GCTCTCCGACACCATGAACCAGAAGTTCGGCGCGGGCAGCACCGGCATGC
GCGGCCGCCTCATCGTCCACTTCATCCTCATGCTCTGCTCGGGCTGCATG
CTGCTGGCCTTCTCCTTCCAGAACGACTCGCTCGGCGGCTCCATCGCGTG
CCTCATCGCCTTCGCCATCGCCATGCAAGCCGTCAACGGCTCCACCTACT
CCATCGTCCCCTACGTCGCGCCCGAGGCGACGGGCGCGGTCAGCGGCATG
GCCGGCGCCGGCGGCAACGTGGGCGCCGTCTGCTGGTCCCTCATCTTCCG
CTTCGGCCCCGCACCCAACCTCTGCTTCCGCATCCTCTCTTACATCATCC
TGGGGGCGGCGTGCACCGCGCCGCTCATCAGCATCCGCGGCTACGACACG
CTCTTCACCAAGGCCAAGGACGAGATGGCGGCGATCGACGTCGACGGCAT
GGACGGCAAGCGCGCGGCGCCGCAGGCGGAGCGCATCTGA