mRNA_3181 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA) HSP 1 Score: 1176 bits (3042), Expect = 0.000e+0 Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1
Query: 1 MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER
Sbjct: 1 MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 618
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK) HSP 1 Score: 607 bits (1564), Expect = 1.380e-208 Identity = 335/622 (53.86%), Postives = 439/622 (70.58%), Query Frame = 1
Query: 10 YELSERDKNNPHNAKLEGSPAFKVG-EHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPS-------GTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGG-SVGAPVMLPLT----NSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEM 1836
YEL+++D+N+P N KLEG F E R+CTD+LF LLLIA W AMTFLG VV G+I + E GNP+RL+NGID GHICGVD AV+D K Y +PS GVCV SCP E + +F C + TI++ +D AW+YV QG CMY+ A+TD+FNYCV+DAA+SA + A +V A + L+ + +SW + ADL+ +K ++LG +G + ++ FIY+ +R+P +LF+L W I V + A ++ TA +W E PQ HSD+EAK LLYFSY LF + GLW LL+L LRKRI A+ +TK+A+RAV +M LL+ +P+IQTLG+L+FL+PW IY +YLASSG +T S T+K F+Y DN RYAGLYL+FC+FWTS++I+A+GQ+VVAM+++ WYFT ++ IG+ TVL++I +++YH GTAAFGSL+IAIIKTIR +IAYLQKKAK S NK+L A+LC XXXXXXXX KCMKFLNKNAYIQTAIFG SFC AA+ AFFLIARNILR+AAV MV + V +LG IL+P+ + YL +D +HGL P + V ++A+ VA MF +VFGMAIST LQCF+ADEEM
Sbjct: 3 YELNDKDRNDPANKKLEGGADFPGPCEKRKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYYLPSVSTNSYGAIGVCVDSCPSERDLTQFVC--NYTIDSTF--DSSDALEMAQAWRYVLQGQCMYHEATTDIFNYCVYDAALSAASAAIDQVVASALNVSADNVTGLSYETDSDSSWFDNFTADLMTAKYVILGFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSWASE-SPQIHSDTEAKGLLYFSYALFVVFGLWLLLILVLRKRIQLALRITKQASRAVAAMKLLMVWPVIQTLGVLVFLIPWTIYALYLASSGEVT---VDSTGTIKTFTYDDNIRYAGLYLLFCWFWTSQFIIAMGQVVVAMAISFWYFTLDRSKIGNGTVLKAIRQSMWYHMGTAAFGSLIIAIIKTIRAIIAYLQKKAKKSGNKILQAVLCXXXXXXXXXXKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSMVGDFVLLLGKILIPVGTTFLAYLVLAYAYSDSLHGLYTPCVFVFLLAYFVALMFVEVFGMAISTCLQCFVADEEM 616
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI) HSP 1 Score: 570 bits (1469), Expect = 5.160e-195 Identity = 293/565 (51.86%), Postives = 405/565 (71.68%), Query Frame = 1
Query: 121 LLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAIS--------AMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGA----TVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQ 1779
+L A+WAAMT LG +V G+I + E GNPKRL+NGID +G ICGV V + + Y +PSG GVCV CP NY +F C ++ E ++N + + AW V+ GDC+Y+ A+T++ +YCVFD+ I A+ A+A G + V+ + ++W D+ AD++ ++ L+ G LG S L+ Y+ +R+P +LFLL+W G+ A+ GAG++L+ T++ W E EP+ HSD E A Y SY++F + +WALL+LW RKRI AI +TKEA+RAVN M LL+ FP++Q+ LLIFL+PW +V+YLASSG IT + +GA TVK F Y+DN RY LY +F YFWTSE+I+A+GQIVVAM+VA+WYF R+K +IGS TVL S+ ++L+YH+GTAAFGSL+IAIIKTIR ++AY+QKK KD+HNK+L A+LCC XXXXXXXEKCMKFLNKNAYIQTAIFGYSFC AA+KAFFLIARNI+RV AVG+VSE+V ILG +++PL S + +Y+ A+ ++D++HG++ +++V I+AF VA+MFT+
Sbjct: 1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPATTNYTQFICYDEVYPE--IFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKLLILFPVVQSAALLIFLLPWVTFVLYLASSGEITTEQWETGAGTTITVKQFKYTDNIRYTALYFLFAYFWTSEFIVAMGQIVVAMAVASWYFCRDKSTIGSGTVLSSVKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNIMRVMAVGVVSEVVLILGKVMIPLVSTVLFYVCAEATISDELHGMVAISVLVFIVAFFVANMFTE 563
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA) HSP 1 Score: 553 bits (1424), Expect = 7.760e-188 Identity = 295/604 (48.84%), Postives = 408/604 (67.55%), Query Frame = 1
Query: 88 HRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDA---------------AISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
+R+CTD+L LLLIA W A T LG +V G+I++ EAGNP RLVNG+D G +CG+D V + + Y +PSG G+C+ SCP +Y++F+C+ PG + + A++ +A G CMY+ A+TD+FNYC++DA AI+A N + A A G + P + +W D ADL + ++ G F+Y+ L+RVP +LFL+ W + +++ G + + +AW+ + + HSD E+K LLYF YVL A+G L+ L +L +RKRI A+ + KEA++A+++M +++ FP+IQ+LG+L FL+PW IYVVYLASSG I +E P+GA VK F Y+DN RYA L+L+F +FWTS++++ALGQ+VVAM+V+ WYFT+EKGSIG+ TV ++I +++YH+GT AFGSL+IAIIKTIR VI+YLQKKA S NKL A+LCC XXXXXX MKFLNKNAYIQTAI+GYSFCKAARKAFFLIARNILRV AV +V + +G +++ + + +L M D++HGL GP I ++A+ VA MF +VFGMAI TILQCF+ADEEMF P ER
Sbjct: 5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVKNEENIYYLPSGAGICIESCPTATDYKQFHCM-----------PGEEPEDDLDAYKKIAAGKCMYHVATTDVFNYCIYDAVLEAAQDVGAATLEQAIAAANNGTSDAVAAGDIPESYFEP--DEDNWFDDFTADLYKAIYVIFGFGXXXXXXXGFLYLILLRVPGVLFLMTWGIIFLVQLLWLVGGALCVQIGKAWEDDNK---HSDMESKGLLYFGYVLIAIGVLFFLFILCMRKRIKLAVGIVKEASKAISAMKIIVLFPVIQSLGVLCFLIPWVIYVVYLASSGEIVTIEMPNGAQVKQFQYTDNMRYAALFLLFSWFWTSQFVVALGQLVVAMAVSMWYFTKEKGSIGNLTVFKAIRVSMWYHSGTCAFGSLIIAIIKTIRAVISYLQKKAAQSGNKLAQAVLCCIQXXXXXXXXXMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRVVAVALVGNYILFIGKLVITVVTTFLAFLVLDS-MEDELHGLYGPIIFTFLLAYFVALMFVEVFGMAIYTILQCFVADEEMFAPAER 591
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK) HSP 1 Score: 548 bits (1413), Expect = 2.780e-185 Identity = 313/621 (50.40%), Postives = 407/621 (65.54%), Query Frame = 1
Query: 10 YELSERDKNNPHNAKLEGSPAFKVG-EHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPS-GT-----GVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASA-----AAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEM 1836
YE+S++DK +P N KLE S F E R+CTD+LF LL+IA W AMTFLG VV G I S +AGNP+RL+NGID +G+ICGVD V K Y +P+ GT GVC+ SCP + F C YN ++ E +Q V+ G+CMY +TD+FNYC++D + A + A ++ A V L +S+ W D AD+ K ++ G +G + ++ F+Y+ L+R+P +LF+L W IL + + G++ TA W + +H+ +EA +L YFSY LFAL G+W LL+L LRKRI A+ +TKEA++AV SM LLL +P+IQTLG+L FL+PW IYV+YLASSGT VE +G +K F+YSDN RYAGLYL+FC+FWTSE+++A+GQIVVAM+V+ WYFT ++ SIG H GTAAFGSL+IAIIKTIR VIAY+QKKAK S NKL +LC EKCMKFLNKNAYIQTAIFG SFC AA+ AFFLIARNILR+AAV +V + V ++G IL+P+A+ YLA AD +GL P I V ++A+ VA MF +VFGMAIST LQCFIADEEM
Sbjct: 55 YEMSDKDKEHPDNKKLEHSADFAGPCEKRKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIYYLPAVGTTVSIAGVCIDSCPSTQDTSTFICK---------YNVSDELTTLEY-YQEVSSGNCMYQEPTTDIFNYCIYDTLLDAAESAAYQTLEEVMSSFNMSSANVSLSSDDSSDWFDDFTADIYTGKYVIFGFGIGVALVIGFVYLFLLRIPGVLFMLTWGIIFSILFLLLIGGVLCYTTASDW---ADDSSHTTTEANSLKYFSYFLFALTGVWLLLMLVLRKRIQLALKITKEASKAVASMKLLLIWPVIQTLGVLCFLIPWIIYVLYLASSGT---VEVNNG--IKTFTYSDNIRYAGLYLLFCWFWTSEFVIAMGQIVVAMAVSFWYFTMDRSSIGXXXXXXXXXXXXXXHTGTAAFGSLIIAIIKTIRAVIAYMQKKAKQSGNKLAQIVLCVIQCCMWCLEKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSLVGDFVLLIGRILIPVATTFLAYLALAYSSADY-NGLWAPIIFVFLLAYSVALMFVEVFGMAISTCLQCFIADEEM 656
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA) HSP 1 Score: 439 bits (1130), Expect = 2.090e-143 Identity = 251/623 (40.29%), Postives = 361/623 (57.95%), Query Frame = 1
Query: 40 PHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVP-SGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVA----------------WQYVAQGDCMYYAASTDLFNYCVF-DAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
P + KL+ P F R+CTD LF L+L+ W AMT +G+ V + GNP RLVNGID QG ICGVD V L K Y + GTGVCVA CP + Y TT +AA N G D N + A + G CMY S D+ N+C+F D AI A + L + S++ AD+ ++ +LG G S ++ F+Y L+RVP ++ ++ W L ++A+F G L W + Q H+D + F + L GL+A L L++ +RI A + KEAARA+ +P ++ P+++ +GL++F VP Y VY+AS G + T +G VK +Y + G YL+FC FWT+++I+A+GQIVVA++V ++FTR+K ++GS T +++ ++YH GTAAFGSL+IAII+ IR +IA+ QKKAK S NK+ LCC +KCM+F+NKNAYIQTA+F FCK+ ++AFFLIARNI+RV AV MVSE + I+ +++ LA+ A YL + +++H +GPTI VG++A++VA +F ++F M +TILQCFIADEEM+ P ER
Sbjct: 4 PGSQKLQAPPNFDGPVKRKCTDTLFMLVLVCCWIAMTVIGIKAV--------QTGNPDRLVNGIDYQGRICGVDAGVETLTKMYYIRFDGTGVCVADCPAATDLNTLYTC--TTPDAAFANGGADQLNCKGADAQQCADLTGVTDPATFSGGGDGACMYQIESVDVLNHCLFTDPAI-----------------ADAFVSLNSQMSYMQQFLADIYTARNWILGFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQ-HTDVQITIARIFGIAGYVLAGLFACLALFMCRRIRLATSIMKEAARAIGKIPAMILMPVVEAVGLVLFFVPLVFYGVYVASMGDFSTT-TVAGLEVKTVTYGSEVQGMGWYLLFCLFWTTQFIIAMGQIVVALAVVKYFFTRDKSTLGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSMTTATILQCFIADEEMYSPAER 597
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS) HSP 1 Score: 426 bits (1094), Expect = 7.090e-139 Identity = 240/597 (40.20%), Postives = 360/597 (60.30%), Query Frame = 1
Query: 79 VGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKA-------VADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQ--YVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFE 1842
V R CTD+LF LLL+ +W AMT +GL G+I S + G+P+RL+NG+D +ICGV V +L K YP+PSG VCV CP NY+ F+C +T D N + + Q + +Q CM Y ST +YC+ D N T ++ + + + + + + L D+ + ++ G + +L +++ ++++P L LLVW + + A IGAG +T+ W +T +EA AL Y SYVL+ L LW +++ ++R+RI AI KE+ARA+++MP++ FP+ Q LGL+ F V W IY+ +LASSG +T + K +YS N +YA LY++F +FWTS++++A+GQ+VVA+SV+ WYF+R++ IG+ T R + ++H GTAAFGSLVIAI+KTI T++ Y+QK+ S +L LL EKC+KF+NK AY QTAIF YSFCKAAR FFLI RN LR++AV +VS +V + + +AS +A Y + D+++ L+ PT+++G++A+ V+ MF +VFGM+IST+LQCFIADEEMF+
Sbjct: 1 VESRRTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGVTNYQTPLGADVINLPKAYPLPSGYFVCVERCPSVTNYDEFHCEYETV----------DITNTKKSLQIAHTSQKQCMPYIKSTSFLSYCIPDIP----NVTTSNNETHTEISITMEDQINSQSDFFDKLMTDVYNVRYVIFYFGCGMAMVLGIVFLVVIQLPGFLSLLVWTMIIAVDASLIGAGWYTKETSLKWASS---ETRGGNEAVALFYASYVLYGLAVLWVMIICYIRRRIVLAIYCVKESARAISAMPVMTLFPVAQVLGLVAFTVVWGIYMAFLASSGDVTG--SYGCFLYKELTYSTNTKYAALYMLFMWFWTSQFLVAVGQLVVAVSVSLWYFSRDRSQIGNTTFCRVLYLVSFHHLGTAAFGSLVIAIVKTIGTILTYVQKRLSKSQLRLAVLLLKVLHNLMWCIEKCLKFINKQAYCQTAIFSYSFCKAARMGFFLILRNALRISAVSIVSRIVLFINKTFITVASTVAGYYYLEMHFGDELNLLMMPTLLIGLVAYAVSEMFDEVFGMSISTLLQCFIADEEMFD 578
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A8J2WZ97_9STRA (Choline transporter-like protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ97_9STRA) HSP 1 Score: 417 bits (1073), Expect = 5.300e-134 Identity = 265/669 (39.61%), Postives = 388/669 (58.00%), Query Frame = 1
Query: 19 SERDKNNPHNAKLE-----GSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVG---IIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQ--YVAQGD----------------------CMYYAASTDLFNYCVFD---AAISAMNTTAASAAA-------------GGSVGAPVMLPLTNSA--------SWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHN----KLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILG-LILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFE 1842
+E DK +P+N L+ G P K R+CTD+L +LLL +W MT +GL + I + + GNP +L+NGID + +CG+D V D K Y +P+G+GVC+ CP++ N + F+C +D + + + W+ YVA+G C Y + D+ NYCV + A +A AA AA G+ AP PL +A + + AD++ S + G G+ + F+Y ++R+P +L L+VW + + ++ + T+ AW + + ++A +LY +Y AL LWA + LRKRI AI +TKEAA+ + +MP+++ FP++Q + L++F++PW IY ++LASSG + ET GA + Y + AG Y+IF YFW+SE+I+ALGQI++A++V+TWYFTR+KG IG+ TV+ S +YH GTAAFGSL+IAIIKTIR +I Y+QKK K+ N K+ A+LCC XXXX EKCMKF+NKNAYIQTAIFGY FCKAA+ AFFLI RNI R+ A+ +VS V +LG L++ A+ L Y A ++D+++ + P + IIAF VA MF +V+GMA+STILQCF ADEE+++
Sbjct: 23 TEDDKKDPNNKPLDVGKDFGGPCKK----RKCTDVLCTLLLAFAWFCMTVVGLACIPGSPIEGTMGLQKGNPYKLINGIDYKDRVCGIDSDVKDRLKLYYLPTGSGVCIKKCPEKQNAQAFHCTDDAQEKLDKID------RTQTGWEVLYVAKGFEMVKECNDPKCSDPQSLRRCQCCAPYYPTNDVMNYCVSEQAQAVAAAAGDQAAQQAADATKPCDPTPPPVAGATKAPT--PLCGAALAAESQERDYTEKMYADMMVSMWYIFGFGFFGAIFVGFVYTFILRIPGVLALVVWGIIVAVGVFWLALAAMCYQTSVAWK---QDEDRDANQANGMLYLAYFCAALCALWACTICCLRKRIALAIGITKEAAKCIATMPIIIVFPVVQVMALIVFVIPWFIYCLFLASSGEM---ETVKGA--RQMVYDETTFKAGWYMIFVYFWSSEFIIALGQIILALAVSTWYFTRDKGKIGNSTVIWSFRQGAWYHWGTAAFGSLIIAIIKTIRAMIKYIQKKCKNIKNPVAKKIAMAVLCCIDCXXXXIEKCMKFINKNAYIQTAIFGYHFCKAAKCAFFLILRNIARIMALSIVSGFVLLLGKLVITAGATFLCYVCLAYTPVSDELNYIWLPLVFTAIIAFYVAAMFNEVWGMAMSTILQCFCADEEIYK 671
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S2V489_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V489_9STRA) HSP 1 Score: 405 bits (1041), Expect = 2.300e-133 Identity = 212/362 (58.56%), Postives = 278/362 (76.80%), Query Frame = 1
Query: 772 IGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETP-SGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
+G L ++ TA++WDG+ E HSDSE K L F YVL A+G L+ L ++ +RKRI A+ + KEA++A+++M +++FFP+IQ++G+L FL+PW IYVVYLASSG + E P SG VK F Y+D+ RYA L+L+F +FWTS++I+ALGQ+VVAM+V+ WYFT+ K SIGS TV +SI +++YH+GT AFGSL+IAIIKTIR V++Y+QKKA S NK+ ALLCC XXXXX EKCMKFLNKNAYIQTAI+GYSFCKAARKAFFLIARNILR+ AV +V V +G +++ L + +L M+DK+HGL PTI I+A+ V+ MF +VFGMAI TILQCF+ADEEM+EP ER
Sbjct: 1 VGGALCIV-TAESWDGDGE---HSDSEVKGLKVFGYVLVAIGALFFLFIVCMRKRIKLAVGIVKEASKAISAMKVIVFFPVIQSIGVLCFLIPWIIYVVYLASSGEMVTYEVPASGVMVKKFEYTDSMRYAALFLLFSWFWTSQFIIALGQLVVAMAVSMWYFTKNKSSIGSSTVFKSIKMSMWYHSGTCAFGSLIIAIIKTIRAVVSYIQKKAAKSGNKIAVALLCCIQXXXXXIEKCMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRITAVALVGNYVLFIGKMVITLLATFLAFLVMDSTMSDKLHGLYAPTIFTFILAYFVSLMFVEVFGMAIYTILQCFVADEEMYEPAER 358
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S4TAG2_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAG2_9STRA) HSP 1 Score: 400 bits (1027), Expect = 1.170e-127 Identity = 241/633 (38.07%), Postives = 348/633 (54.98%), Query Frame = 1
Query: 145 MTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVA-------DLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEA------AVYNPGNDTFN---AEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNS---ASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPV------------------------ETPSGATV---------------KAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNK-----LLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
MT +G V G+I+S GNP+RLVNG+D G+ICG+ V +L K Y +PSG +C+ SCP E N+++FYC + E N G D N + Y + CM + +T YC D I + A S+ + ++ AD S+ ++ G LG + +L I++ L++ P +L +VW+ +GI IGAG + + W + D E L + S + + GLW + + LRKRI AI KEA+RA+ +MP++ PIIQ +GL +F +PW I++ YLASSG IT + +G + K+FSYS N +YAGLY++F +FWTS++I+A+GQ+VV++S A WYFT+ K +G+ T +++ TL YH GTAAFGSL+IAIIKTIR + AY+Q+K +L + CC EKCMKF+NKNAYIQTAIFGYSFCKA+R AFFLI RN+LR++AV +VS+ V ++G + + + S + Y +D+++GL T++V +I++ A MF +VFGMAISTILQCF+ADEEMF P +R
Sbjct: 1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGDLNQKFANESLHTSSNFTIVQEEPKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVASGLWFVTICCLRKRIVLAIACVKEASRAMAAMPIITILPIIQAVGLFVFCIPWGIFMAYLASSGEITAECMCSLDQNDDTEDSLILLNSTNISNSTNGTAIISDDSTGCGEGCFLYKSFSYSQNTKYAGLYMLFVWFWTSQFIVAIGQLVVSISTAMWYFTKNKIGVGNGTFFKALILTLMYHLGTAAFGSLIIAIIKTIRAMFAYIQRKLSSKPGSKTVQIILRVIQCCLWCI----EKCMKFINKNAYIQTAIFGYSFCKASRMAFFLILRNVLRISAVSLVSDFVLLIGKLFIVVTSTIGAYFFLDYHYSDELNGLWLSTMLVCLISYATAEMFNEVFGMAISTILQCFVADEEMFLPEDR 626 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1857bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGACATTATGAGTTGAGTGAGAGGGACAAAAACAATCCGCATAATGCback to top protein sequence of jgi.p|Trimin1|160824 >Trimin1|160824|e_gw1.14.184.1 ID=Trimin1|160824|e_gw1.14.184.1|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=619bp MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTback to top mRNA from alignment at Contig_14:605187..609586- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4400bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_14:605187..609586- >mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1857bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )back to top |