mRNA_3181 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160824
Unique NamemRNA_3181
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 1176 bits (3042), Expect = 0.000e+0
Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1
Query:    1 MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
            MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER
Sbjct:    1 MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 618          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 607 bits (1564), Expect = 1.380e-208
Identity = 335/622 (53.86%), Postives = 439/622 (70.58%), Query Frame = 1
Query:   10 YELSERDKNNPHNAKLEGSPAFKVG-EHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPS-------GTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGG-SVGAPVMLPLT----NSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEM 1836
            YEL+++D+N+P N KLEG   F    E R+CTD+LF LLLIA W AMTFLG VV G+I +   E GNP+RL+NGID  GHICGVD AV+D  K Y +PS         GVCV SCP E +  +F C  + TI++      +D      AW+YV QG CMY+ A+TD+FNYCV+DAA+SA +       A   +V A  +  L+    + +SW  +  ADL+ +K ++LG  +G + ++ FIY+  +R+P +LF+L W     I  V + A ++   TA +W  E  PQ HSD+EAK LLYFSY LF + GLW LL+L LRKRI  A+ +TK+A+RAV +M LL+ +P+IQTLG+L+FL+PW IY +YLASSG +T     S  T+K F+Y DN RYAGLYL+FC+FWTS++I+A+GQ+VVAM+++ WYFT ++  IG+ TVL++I  +++YH GTAAFGSL+IAIIKTIR +IAYLQKKAK S NK+L A+LC XXXXXXXX KCMKFLNKNAYIQTAIFG SFC AA+ AFFLIARNILR+AAV MV + V +LG IL+P+ +    YL      +D +HGL  P + V ++A+ VA MF +VFGMAIST LQCF+ADEEM
Sbjct:    3 YELNDKDRNDPANKKLEGGADFPGPCEKRKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYYLPSVSTNSYGAIGVCVDSCPSERDLTQFVC--NYTIDSTF--DSSDALEMAQAWRYVLQGQCMYHEATTDIFNYCVYDAALSAASAAIDQVVASALNVSADNVTGLSYETDSDSSWFDNFTADLMTAKYVILGFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSWASE-SPQIHSDTEAKGLLYFSYALFVVFGLWLLLILVLRKRIQLALRITKQASRAVAAMKLLMVWPVIQTLGVLVFLIPWTIYALYLASSGEVT---VDSTGTIKTFTYDDNIRYAGLYLLFCWFWTSQFIIAMGQVVVAMAISFWYFTLDRSKIGNGTVLKAIRQSMWYHMGTAAFGSLIIAIIKTIRAIIAYLQKKAKKSGNKILQAVLCXXXXXXXXXXKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSMVGDFVLLLGKILIPVGTTFLAYLVLAYAYSDSLHGLYTPCVFVFLLAYFVALMFVEVFGMAISTCLQCFVADEEM 616          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 5.160e-195
Identity = 293/565 (51.86%), Postives = 405/565 (71.68%), Query Frame = 1
Query:  121 LLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAIS--------AMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGA----TVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQ 1779
            +L A+WAAMT LG +V G+I +   E GNPKRL+NGID +G ICGV   V + +  Y +PSG GVCV  CP   NY +F C ++   E  ++N      + + AW  V+ GDC+Y+ A+T++ +YCVFD+ I         A+    A+A  G +    V+    + ++W  D+ AD++ ++ L+ G  LG S L+   Y+  +R+P +LFLL+W    G+ A+  GAG++L+ T++ W  E EP+ HSD E  A  Y SY++F +  +WALL+LW RKRI  AI +TKEA+RAVN M LL+ FP++Q+  LLIFL+PW  +V+YLASSG IT  +  +GA    TVK F Y+DN RY  LY +F YFWTSE+I+A+GQIVVAM+VA+WYF R+K +IGS TVL S+ ++L+YH+GTAAFGSL+IAIIKTIR ++AY+QKK KD+HNK+L A+LCC XXXXXXXEKCMKFLNKNAYIQTAIFGYSFC AA+KAFFLIARNI+RV AVG+VSE+V ILG +++PL S + +Y+ A+  ++D++HG++  +++V I+AF VA+MFT+
Sbjct:    1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPATTNYTQFICYDEVYPE--IFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKLLILFPVVQSAALLIFLLPWVTFVLYLASSGEITTEQWETGAGTTITVKQFKYTDNIRYTALYFLFAYFWTSEFIVAMGQIVVAMAVASWYFCRDKSTIGSGTVLSSVKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNIMRVMAVGVVSEVVLILGKVMIPLVSTVLFYVCAEATISDELHGMVAISVLVFIVAFFVANMFTE 563          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 7.760e-188
Identity = 295/604 (48.84%), Postives = 408/604 (67.55%), Query Frame = 1
Query:   88 HRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDA---------------AISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
            +R+CTD+L  LLLIA W A T LG +V G+I++   EAGNP RLVNG+D  G +CG+D  V + +  Y +PSG G+C+ SCP   +Y++F+C+           PG +  +   A++ +A G CMY+ A+TD+FNYC++DA               AI+A N   + A A G +      P  +  +W  D  ADL  +  ++ G          F+Y+ L+RVP +LFL+ W     +  +++  G + +   +AW+ + +   HSD E+K LLYF YVL A+G L+ L +L +RKRI  A+ + KEA++A+++M +++ FP+IQ+LG+L FL+PW IYVVYLASSG I  +E P+GA VK F Y+DN RYA L+L+F +FWTS++++ALGQ+VVAM+V+ WYFT+EKGSIG+ TV ++I  +++YH+GT AFGSL+IAIIKTIR VI+YLQKKA  S NKL  A+LCC  XXXXXX   MKFLNKNAYIQTAI+GYSFCKAARKAFFLIARNILRV AV +V   +  +G +++ + +    +L     M D++HGL GP I   ++A+ VA MF +VFGMAI TILQCF+ADEEMF P ER
Sbjct:    5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVKNEENIYYLPSGAGICIESCPTATDYKQFHCM-----------PGEEPEDDLDAYKKIAAGKCMYHVATTDVFNYCIYDAVLEAAQDVGAATLEQAIAAANNGTSDAVAAGDIPESYFEP--DEDNWFDDFTADLYKAIYVIFGFGXXXXXXXGFLYLILLRVPGVLFLMTWGIIFLVQLLWLVGGALCVQIGKAWEDDNK---HSDMESKGLLYFGYVLIAIGVLFFLFILCMRKRIKLAVGIVKEASKAISAMKIIVLFPVIQSLGVLCFLIPWVIYVVYLASSGEIVTIEMPNGAQVKQFQYTDNMRYAALFLLFSWFWTSQFVVALGQLVVAMAVSMWYFTKEKGSIGNLTVFKAIRVSMWYHSGTCAFGSLIIAIIKTIRAVISYLQKKAAQSGNKLAQAVLCCIQXXXXXXXXXMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRVVAVALVGNYILFIGKLVITVVTTFLAFLVLDS-MEDELHGLYGPIIFTFLLAYFVALMFVEVFGMAIYTILQCFVADEEMFAPAER 591          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 548 bits (1413), Expect = 2.780e-185
Identity = 313/621 (50.40%), Postives = 407/621 (65.54%), Query Frame = 1
Query:   10 YELSERDKNNPHNAKLEGSPAFKVG-EHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPS-GT-----GVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASA-----AAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEM 1836
            YE+S++DK +P N KLE S  F    E R+CTD+LF LL+IA W AMTFLG VV G I S   +AGNP+RL+NGID +G+ICGVD  V    K Y +P+ GT     GVC+ SCP   +   F C          YN  ++    E  +Q V+ G+CMY   +TD+FNYC++D  + A  + A        ++     A V L   +S+ W  D  AD+   K ++ G  +G + ++ F+Y+ L+R+P +LF+L W     IL + +  G++   TA  W    +  +H+ +EA +L YFSY LFAL G+W LL+L LRKRI  A+ +TKEA++AV SM LLL +P+IQTLG+L FL+PW IYV+YLASSGT   VE  +G  +K F+YSDN RYAGLYL+FC+FWTSE+++A+GQIVVAM+V+ WYFT ++ SIG              H GTAAFGSL+IAIIKTIR VIAY+QKKAK S NKL   +LC         EKCMKFLNKNAYIQTAIFG SFC AA+ AFFLIARNILR+AAV +V + V ++G IL+P+A+    YLA     AD  +GL  P I V ++A+ VA MF +VFGMAIST LQCFIADEEM
Sbjct:   55 YEMSDKDKEHPDNKKLEHSADFAGPCEKRKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIYYLPAVGTTVSIAGVCIDSCPSTQDTSTFICK---------YNVSDELTTLEY-YQEVSSGNCMYQEPTTDIFNYCIYDTLLDAAESAAYQTLEEVMSSFNMSSANVSLSSDDSSDWFDDFTADIYTGKYVIFGFGIGVALVIGFVYLFLLRIPGVLFMLTWGIIFSILFLLLIGGVLCYTTASDW---ADDSSHTTTEANSLKYFSYFLFALTGVWLLLMLVLRKRIQLALKITKEASKAVASMKLLLIWPVIQTLGVLCFLIPWIIYVLYLASSGT---VEVNNG--IKTFTYSDNIRYAGLYLLFCWFWTSEFVIAMGQIVVAMAVSFWYFTMDRSSIGXXXXXXXXXXXXXXHTGTAAFGSLIIAIIKTIRAVIAYMQKKAKQSGNKLAQIVLCVIQCCMWCLEKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSLVGDFVLLIGRILIPVATTFLAYLALAYSSADY-NGLWAPIIFVFLLAYSVALMFVEVFGMAISTCLQCFIADEEM 656          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 2.090e-143
Identity = 251/623 (40.29%), Postives = 361/623 (57.95%), Query Frame = 1
Query:   40 PHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVP-SGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVA----------------WQYVAQGDCMYYAASTDLFNYCVF-DAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
            P + KL+  P F     R+CTD LF L+L+  W AMT +G+  V        + GNP RLVNGID QG ICGVD  V  L K Y +   GTGVCVA CP   +    Y    TT +AA  N G D  N + A                +     G CMY   S D+ N+C+F D AI                 A   + L +  S++    AD+  ++  +LG   G S ++ F+Y  L+RVP ++ ++ W   L ++A+F   G  L      W  +   Q H+D +      F    + L GL+A L L++ +RI  A  + KEAARA+  +P ++  P+++ +GL++F VP   Y VY+AS G  +   T +G  VK  +Y    +  G YL+FC FWT+++I+A+GQIVVA++V  ++FTR+K ++GS T  +++   ++YH GTAAFGSL+IAII+ IR +IA+ QKKAK S NK+    LCC        +KCM+F+NKNAYIQTA+F   FCK+ ++AFFLIARNI+RV AV MVSE + I+  +++ LA+  A YL     + +++H  +GPTI VG++A++VA +F ++F M  +TILQCFIADEEM+ P ER
Sbjct:    4 PGSQKLQAPPNFDGPVKRKCTDTLFMLVLVCCWIAMTVIGIKAV--------QTGNPDRLVNGIDYQGRICGVDAGVETLTKMYYIRFDGTGVCVADCPAATDLNTLYTC--TTPDAAFANGGADQLNCKGADAQQCADLTGVTDPATFSGGGDGACMYQIESVDVLNHCLFTDPAI-----------------ADAFVSLNSQMSYMQQFLADIYTARNWILGFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQ-HTDVQITIARIFGIAGYVLAGLFACLALFMCRRIRLATSIMKEAARAIGKIPAMILMPVVEAVGLVLFFVPLVFYGVYVASMGDFSTT-TVAGLEVKTVTYGSEVQGMGWYLLFCLFWTTQFIIAMGQIVVALAVVKYFFTRDKSTLGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSMTTATILQCFIADEEMYSPAER 597          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS)

HSP 1 Score: 426 bits (1094), Expect = 7.090e-139
Identity = 240/597 (40.20%), Postives = 360/597 (60.30%), Query Frame = 1
Query:   79 VGEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKA-------VADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQ--YVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFE 1842
            V   R CTD+LF LLL+ +W AMT +GL   G+I S   + G+P+RL+NG+D   +ICGV          V +L K YP+PSG  VCV  CP   NY+ F+C  +T           D  N + + Q  + +Q  CM Y  ST   +YC+ D      N T ++      +   +   + + + +   L  D+   + ++     G + +L  +++ ++++P  L LLVW   + + A  IGAG    +T+  W      +T   +EA AL Y SYVL+ L  LW +++ ++R+RI  AI   KE+ARA+++MP++  FP+ Q LGL+ F V W IY+ +LASSG +T   +      K  +YS N +YA LY++F +FWTS++++A+GQ+VVA+SV+ WYF+R++  IG+ T  R +    ++H GTAAFGSLVIAI+KTI T++ Y+QK+   S  +L   LL          EKC+KF+NK AY QTAIF YSFCKAAR  FFLI RN LR++AV +VS +V  +    + +AS +A Y   +    D+++ L+ PT+++G++A+ V+ MF +VFGM+IST+LQCFIADEEMF+
Sbjct:    1 VESRRTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGVTNYQTPLGADVINLPKAYPLPSGYFVCVERCPSVTNYDEFHCEYETV----------DITNTKKSLQIAHTSQKQCMPYIKSTSFLSYCIPDIP----NVTTSNNETHTEISITMEDQINSQSDFFDKLMTDVYNVRYVIFYFGCGMAMVLGIVFLVVIQLPGFLSLLVWTMIIAVDASLIGAGWYTKETSLKWASS---ETRGGNEAVALFYASYVLYGLAVLWVMIICYIRRRIVLAIYCVKESARAISAMPVMTLFPVAQVLGLVAFTVVWGIYMAFLASSGDVTG--SYGCFLYKELTYSTNTKYAALYMLFMWFWTSQFLVAVGQLVVAVSVSLWYFSRDRSQIGNTTFCRVLYLVSFHHLGTAAFGSLVIAIVKTIGTILTYVQKRLSKSQLRLAVLLLKVLHNLMWCIEKCLKFINKQAYCQTAIFSYSFCKAARMGFFLILRNALRISAVSIVSRIVLFINKTFITVASTVAGYYYLEMHFGDELNLLMMPTLLIGLVAYAVSEMFDEVFGMSISTLLQCFIADEEMFD 578          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A8J2WZ97_9STRA (Choline transporter-like protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ97_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 5.300e-134
Identity = 265/669 (39.61%), Postives = 388/669 (58.00%), Query Frame = 1
Query:   19 SERDKNNPHNAKLE-----GSPAFKVGEHRRCTDMLFSLLLIASWAAMTFLGLVVVG---IIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQ--YVAQGD----------------------CMYYAASTDLFNYCVFD---AAISAMNTTAASAAA-------------GGSVGAPVMLPLTNSA--------SWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHN----KLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILG-LILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFE 1842
            +E DK +P+N  L+     G P  K    R+CTD+L +LLL  +W  MT +GL  +    I  +   + GNP +L+NGID +  +CG+D  V D  K Y +P+G+GVC+  CP++ N + F+C +D   +    +        +  W+  YVA+G                       C  Y  + D+ NYCV +   A  +A    AA  AA              G+  AP   PL  +A         +   + AD++ S   + G    G+  + F+Y  ++R+P +L L+VW   + +   ++    +   T+ AW    + +    ++A  +LY +Y   AL  LWA  +  LRKRI  AI +TKEAA+ + +MP+++ FP++Q + L++F++PW IY ++LASSG +   ET  GA  +   Y +    AG Y+IF YFW+SE+I+ALGQI++A++V+TWYFTR+KG IG+ TV+ S     +YH GTAAFGSL+IAIIKTIR +I Y+QKK K+  N    K+  A+LCC   XXXX EKCMKF+NKNAYIQTAIFGY FCKAA+ AFFLI RNI R+ A+ +VS  V +LG L++   A+ L Y   A   ++D+++ +  P +   IIAF VA MF +V+GMA+STILQCF ADEE+++
Sbjct:   23 TEDDKKDPNNKPLDVGKDFGGPCKK----RKCTDVLCTLLLAFAWFCMTVVGLACIPGSPIEGTMGLQKGNPYKLINGIDYKDRVCGIDSDVKDRLKLYYLPTGSGVCIKKCPEKQNAQAFHCTDDAQEKLDKID------RTQTGWEVLYVAKGFEMVKECNDPKCSDPQSLRRCQCCAPYYPTNDVMNYCVSEQAQAVAAAAGDQAAQQAADATKPCDPTPPPVAGATKAPT--PLCGAALAAESQERDYTEKMYADMMVSMWYIFGFGFFGAIFVGFVYTFILRIPGVLALVVWGIIVAVGVFWLALAAMCYQTSVAWK---QDEDRDANQANGMLYLAYFCAALCALWACTICCLRKRIALAIGITKEAAKCIATMPIIIVFPVVQVMALIVFVIPWFIYCLFLASSGEM---ETVKGA--RQMVYDETTFKAGWYMIFVYFWSSEFIIALGQIILALAVSTWYFTRDKGKIGNSTVIWSFRQGAWYHWGTAAFGSLIIAIIKTIRAMIKYIQKKCKNIKNPVAKKIAMAVLCCIDCXXXXIEKCMKFINKNAYIQTAIFGYHFCKAAKCAFFLILRNIARIMALSIVSGFVLLLGKLVITAGATFLCYVCLAYTPVSDELNYIWLPLVFTAIIAFYVAAMFNEVWGMAMSTILQCFCADEEIYK 671          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S2V489_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V489_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 2.300e-133
Identity = 212/362 (58.56%), Postives = 278/362 (76.80%), Query Frame = 1
Query:  772 IGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVETP-SGATVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
            +G  L ++ TA++WDG+ E   HSDSE K L  F YVL A+G L+ L ++ +RKRI  A+ + KEA++A+++M +++FFP+IQ++G+L FL+PW IYVVYLASSG +   E P SG  VK F Y+D+ RYA L+L+F +FWTS++I+ALGQ+VVAM+V+ WYFT+ K SIGS TV +SI  +++YH+GT AFGSL+IAIIKTIR V++Y+QKKA  S NK+  ALLCC  XXXXX EKCMKFLNKNAYIQTAI+GYSFCKAARKAFFLIARNILR+ AV +V   V  +G +++ L +    +L     M+DK+HGL  PTI   I+A+ V+ MF +VFGMAI TILQCF+ADEEM+EP ER
Sbjct:    1 VGGALCIV-TAESWDGDGE---HSDSEVKGLKVFGYVLVAIGALFFLFIVCMRKRIKLAVGIVKEASKAISAMKVIVFFPVIQSIGVLCFLIPWIIYVVYLASSGEMVTYEVPASGVMVKKFEYTDSMRYAALFLLFSWFWTSQFIIALGQLVVAMAVSMWYFTKNKSSIGSSTVFKSIKMSMWYHSGTCAFGSLIIAIIKTIRAVVSYIQKKAAKSGNKIAVALLCCIQXXXXXIEKCMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRITAVALVGNYVLFIGKMVITLLATFLAFLVMDSTMSDKLHGLYAPTIFTFILAYFVSLMFVEVFGMAIYTILQCFVADEEMYEPAER 358          
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Match: A0A7S4TAG2_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAG2_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 1.170e-127
Identity = 241/633 (38.07%), Postives = 348/633 (54.98%), Query Frame = 1
Query:  145 MTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVA-------DLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEA------AVYNPGNDTFN---AEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNS---ASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPV------------------------ETPSGATV---------------KAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNK-----LLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 1854
            MT +G  V G+I+S     GNP+RLVNG+D  G+ICG+   V        +L K Y +PSG  +C+ SCP E N+++FYC  +   E          N G D  N     +   Y +   CM +  +T    YC  D  I  +        A  S+       +       ++     AD   S+ ++ G  LG + +L  I++ L++ P +L  +VW+  +GI    IGAG  +   +  W  +       D E   L + S + +   GLW + +  LRKRI  AI   KEA+RA+ +MP++   PIIQ +GL +F +PW I++ YLASSG IT                           + +G  +               K+FSYS N +YAGLY++F +FWTS++I+A+GQ+VV++S A WYFT+ K  +G+ T  +++  TL YH GTAAFGSL+IAIIKTIR + AY+Q+K            +L  + CC        EKCMKF+NKNAYIQTAIFGYSFCKA+R AFFLI RN+LR++AV +VS+ V ++G + + + S +  Y       +D+++GL   T++V +I++  A MF +VFGMAISTILQCF+ADEEMF P +R
Sbjct:    1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGDLNQKFANESLHTSSNFTIVQEEPKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVASGLWFVTICCLRKRIVLAIACVKEASRAMAAMPIITILPIIQAVGLFVFCIPWGIFMAYLASSGEITAECMCSLDQNDDTEDSLILLNSTNISNSTNGTAIISDDSTGCGEGCFLYKSFSYSQNTKYAGLYMLFVWFWTSQFIVAIGQLVVSISTAMWYFTKNKIGVGNGTFFKALILTLMYHLGTAAFGSLIIAIIKTIRAMFAYIQRKLSSKPGSKTVQIILRVIQCCLWCI----EKCMKFINKNAYIQTAIFGYSFCKASRMAFFLILRNVLRISAVSLVSDFVLLIGKLFIVVTSTIGAYFFLDYHYSDELNGLWLSTMLVCLISYATAEMFNEVFGMAISTILQCFVADEEMFLPEDR 626          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160824 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9G9_9STRA0.000e+0100.00Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S3Y650_HETAK1.380e-20853.86Choline transporter-like protein n=1 Tax=Heterosig... [more]
D7FSF7_ECTSI5.160e-19551.86Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S2Y2B5_9STRA7.760e-18848.84Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7S3Y6D2_HETAK2.780e-18550.40Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A835Z6J7_9STRA2.090e-14340.29Choline transporter-like protein n=1 Tax=Tribonema... [more]
B8C1T3_THAPS7.090e-13940.20Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A8J2WZ97_9STRA5.300e-13439.61Choline transporter-like protein n=1 Tax=Pelagomon... [more]
A0A7S2V489_9STRA2.300e-13358.56Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7S4TAG2_9STRA1.170e-12738.07Choline transporter-like protein n=2 Tax=Ditylum b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:605187..609586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160824|e_gw1.14.184.1
KEGG TC2.A.92.1,2.A.92.1.1
BRITEko00000,ko00001,ko02000,ko04090,ko04147
KEGG Pathwayko05231,map05231
KEGG koko:K06515,ko:K15377
Descriptioncholine transmembrane transporter activity
COG categoryH
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1362@1|root,KOG1362@2759|Eukaryota
Evalue8.47e-196
Seed ortholog2880.D7FSF7
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-04_000670.1
TranscriptId161146
TrackFilteredModels1
ProteinId160824
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160824gene_3181Tribonema minus UTEX_B_3156 geneContig_14 605187..609586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160824Trimin1|160824|e_gw1.14.184.1Tribonema minus UTEX_B_3156 polypeptideContig_14 605187..609586 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3181_5exon_3181_5Tribonema minus UTEX_B_3156 exonContig_14 605187..605437 -
exon_3181_4exon_3181_4Tribonema minus UTEX_B_3156 exonContig_14 606076..606351 -
exon_3181_3exon_3181_3Tribonema minus UTEX_B_3156 exonContig_14 606797..607106 -
exon_3181_2exon_3181_2Tribonema minus UTEX_B_3156 exonContig_14 607713..607898 -
exon_3181_1exon_3181_1Tribonema minus UTEX_B_3156 exonContig_14 608753..609586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3181CDS_3181Tribonema minus UTEX_B_3156 CDSContig_14 608753..609586 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1857bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGACATTATGAGTTGAGTGAGAGGGACAAAAACAATCCGCATAATGC
CAAGCTGGAGGGGTCTCCGGCCTTCAAGGTGGGAGAGCATAGGAGGTGCA
CAGACATGCTCTTCTCGCTCCTGCTCATCGCGTCGTGGGCGGCCATGACT
TTCCTTGGTCTGGTGGTGGTGGGGATAATAGACTCTCCTGAGTTTGAGGC
GGGCAACCCCAAGCGCCTTGTCAACGGCATCGACAATCAAGGGCACATCT
GCGGCGTCGACAAGGCAGTCGCAGACCTGGACAAGTTCTACCCAGTGCCG
AGCGGCACGGGGGTGTGCGTGGCCTCATGCCCCAAAGAGGACAACTATGA
GCGCTTCTATTGCATCAATGACACCACCATTGAGGCAGCGGTCTACAACC
CTGGCAACGACACGTTCAACGCGGAGGTCGCGTGGCAGTACGTGGCGCAG
GGCGACTGCATGTACTACGCAGCATCCACGGACCTCTTCAACTACTGCGT
GTTCGACGCCGCCATCAGCGCCATGAACACCACCGCTGCGTCTGCAGCCG
CTGGCGGCAGCGTGGGCGCACCTGTAATGCTGCCCCTCACCAACTCTGCC
TCATGGCTCACCGACCTAGCCGCTGACCTCATAGCGAGCAAGGCGCTGGT
GCTGGGCATATCGCTGGGTGGCTCGGCGCTGCTTGCGTTCATCTACATCT
GCCTCATGCGCGTGCCGGCGCTGCTGTTCCTGCTGGTGTGGGCGTGCGCG
CTGGGCATTCTGGCGGTGTTCATCGGCGCAGGGCTGGTGCTCATGGACAC
GGCGCAGGCGTGGGATGGGGAGCCGGAGCCGCAGACGCACTCGGACAGCG
AGGCCAAGGCTCTGTTGTACTTCTCATATGTGCTGTTTGCGCTGGGGGGT
CTTTGGGCGCTGCTGCTGCTGTGGCTGCGCAAGCGCATCAACACGGCCAT
CTGCGTGACCAAGGAGGCAGCGCGCGCCGTCAACTCCATGCCGCTGCTGC
TCTTCTTTCCCATCATTCAGACGCTGGGGCTTCTGATTTTCCTGGTCCCG
TGGGCCATCTACGTGGTCTACCTGGCCAGTTCAGGCACCATAACACCTGT
GGAGACACCCAGTGGCGCTACCGTCAAGGCCTTCTCCTACTCTGACAACG
ATCGGTACGCGGGACTGTACCTCATCTTCTGCTATTTCTGGACCTCAGAG
TACATACTGGCGCTGGGTCAGATAGTGGTGGCAATGAGCGTTGCCACGTG
GTACTTCACCAGGGAGAAGGGGAGCATCGGGAGCCGCACCGTGCTGAGGT
CCATTGGCAGCACGCTGTACTATCACGCAGGAACGGCAGCATTTGGGTCA
CTGGTCATAGCCATAATCAAGACCATCCGCACCGTCATCGCATACCTCCA
GAAAAAGGCCAAGGACAGCCACAACAAGCTCCTCTCTGCGCTGCTCTGCT
GCATACAGTGCTGCATGTGGTGCCTGGAGAAGTGCATGAAGTTCCTCAAC
AAGAACGCCTACATCCAGACGGCCATATTCGGCTACAGCTTCTGCAAGGC
TGCGCGCAAGGCCTTCTTCCTCATTGCGCGCAACATACTGCGGGTCGCGG
CTGTTGGCATGGTATCAGAGCTGGTGGCCATCCTGGGCCTCATATTGGTG
CCCCTGGCCTCAGCGCTTGCGTACTACCTAGCAGCGCAAGAGCTCATGGC
CGACAAAATGCACGGGCTCATTGGGCCCACCATCATAGTGGGGATCATCG
CCTTCATCGTCGCACACATGTTCACGCAAGTGTTTGGAATGGCCATCAGC
ACCATCCTGCAGTGCTTCATTGCAGACGAGGAGATGTTTGAACCAGGCGA
AAGGTGA
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protein sequence of jgi.p|Trimin1|160824

>Trimin1|160824|e_gw1.14.184.1 ID=Trimin1|160824|e_gw1.14.184.1|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=619bp
MGHYELSERDKNNPHNAKLEGSPAFKVGEHRRCTDMLFSLLLIASWAAMT
FLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVP
SGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQ
GDCMYYAASTDLFNYCVFDAAISAMNTTAASAAAGGSVGAPVMLPLTNSA
SWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACA
LGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGG
LWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVP
WAIYVVYLASSGTITPVETPSGATVKAFSYSDNDRYAGLYLIFCYFWTSE
YILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGS
LVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCIQCCMWCLEKCMKFLN
KNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILV
PLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAIS
TILQCFIADEEMFEPGER*
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mRNA from alignment at Contig_14:605187..609586-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4400bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )
ATGGGACATTATGAGTTGAGTGAGAGGGACAAAAACAATCCGCATAATGC CAAGCTGGAGGGGTCTCCGGCCTTCAAGGTGGGAGAGCATAGGAGGTGCA CAGACATGCTCTTCTCGCTCCTGCTCATCGCGTCGTGGGCGGCCATGACT TTCCTTGGTCTGGTGGTGGTGGGGATAATAGACTCTCCTGAGTTTGAGGC GGGCAACCCCAAGCGCCTTGTCAACGGCATCGACAATCAAGGGCACATCT GCGGCGTCGACAAGGCAGTCGCAGACCTGGACAAGTTCTACCCAGTGCCG AGCGGCACGGGGGTGTGCGTGGCCTCATGCCCCAAAGAGGACAACTATGA GCGCTTCTATTGCATCAATGACACCACCATTGAGGCAGCGGTCTACAACC CTGGCAACGACACGTTCAACGCGGAGGTCGCGTGGCAGTACGTGGCGCAG GGCGACTGCATGTACTACGCAGCATCCACGGACCTCTTCAACTACTGCGT GTTCGACGCCGCCATCAGCGCCATGAACACCACCGCTGCGTCTGCAGCCG CTGGCGGCAGCGTGGGCGCACCTGTAATGCTGCCCCTCACCAACTCTGCC TCATGGCTCACCGACCTAGCCGCTGACCTCATAGCGAGCAAGGCGCTGGT GCTGGGCATATCGCTGGGTGGCTCGGCGCTGCTTGCGTTCATCTACATCT GCCTCATGCGCGTGCCGGCGCTGCTGTTCCTGCTGGTGTGGGCGTGCGCG CTGGGCATTCTGGCGGTGTTCATCGGCGCAGGGCTGGTGCTCATGGACAC GGCGCAGGCGTGGGATGGGGAGCCGGAGCCGCAGGTACGCTCGCTGACGC GATCTGAGGCGTACTTCAACGCATGTGTTTGAGGCGTACTGTGCTGATGC TGGGTTTGGCACCTTTGTGGGAATTGTATGAGGGCAGGTGTAGGGGGAAA AGTACAGAGGCAGTGCCAGATGGCATAGTGTTAGGCATGGGGAAGCTTCT GGTCGTTAAGCGCAAGCACACTTCTTTTGTTGGTGTTTCCAATCTACACA GGATCGCAGAACACTGCAAAGGCTTCAAAGCACGGTCAATATGCAGAATA CTGAAAAGGCTTCATAGGCTTCATAGCACATGCAATATGCAACTCTGGAG GGTTTTTTTTTACGCGATTGACCGCAAGTACCACTCGGTGAAGGAAGGCA ATTTGGACGATGAGGTACTGGAATGTGCATGCGTACTTGGGCATACTTGC TTGCTCTCAGGTGTTCATCAGCTTCTGATCAAAAGAGCCTGGGTGCATGA CCCCTAATGGCCTATGGTTGCTCATCACCGTAGTGGCACTCACACCTCAT AACCTGAAGAGTCAGCACTGAAGCTATCCCATGCATTTGCTACTGATTGA AGCCAGCAAAGACAGGACACCCAGCTGTAGATAACGCAGAATCTTGTTGA TGCTTTCTTGGCATGTGTTACAGTCTACCCCGCCCTGACACCATTGTAAG CCGACGTACATGATGGCGTACCACCACCATGATTGCCGAACTTGCACACA CGACTGACTACCTACAAAGCAACAATAGCATCTGCTGGACGGCCTTGATT CCAACATTTGAGTGAACAACACGCCATTGGGAGCAACTTCTTGACATCAC GGCGCGCCTTTGTACTGCTTGACTTTCCTGCCCTTCAGACGCACTCGGAC AGCGAGGCCAAGGCTCTGTTGTACTTCTCATATGTGCTGTTTGCGCTGGG GGGTCTTTGGGCGCTGCTGCTGCTGTGGCTGCGCAAGCGCATCAACACGG CCATCTGCGTGACCAAGGAGGCAGCGCGCGCCGTCAACTCCATGCCGCTG CTGCTCTTCTTTCCCATCATTCAGGTCAGCAAAATGGGTTCGCAGTATGC AATGTTGAACGTGAACGTGCAAGTGCTGCCGTTTTCAACTGCAAGCTGAC AAGCAGTTGCAAGGTCGGTGTGTGTATGTATGTCCATTATATACTTCACC ATATAGAAGATCAGATAGTTCCTGCTTTTCACAGATCATGTATGTGGCAA TAATCAAGCAAGTCCAATCCCTTTTCTTGCTGGTGTGACCTTGATGCATG CTTCTGTGACAGCTGAAAGCTGTGCCACTGGAGAACGGTCAAGGCTACGC GTCATGATTTGAACCTTCAATTGTGGAGCACACACTTCCATCAGAGTACC CGATGTTGAACACGATACAATGCTCCGAACTGGCAGTCCATTTGGCAGTG GGCCTTGAAGTTGTGGATATGGATTATGAGAACTTCTGCAGAGTGTACTG TATTGTATTTTTCAGAAGGTGTGTAGTCAGCATACTTCAACATGAAGTAC TTATTGTATGCTCCAAATTTCAAGTATGGCATTCATCGACCATCAAAGAT TCTCCACAGAGGTGCATTCCTGGCGTGCATGTATTTTCAGCTCACCAGCA CATGATCGTCTTGGACCACCCTGCTCGCAGACGCTGGGGCTTCTGATTTT CCTGGTCCCGTGGGCCATCTACGTGGTCTACCTGGCCAGTTCAGGCACCA TAACACCTGTGGAGACACCCAGTGGCGCTACCGTCAAGGCCTTCTCCTAC TCTGACAACGATCGGTACGCGGGACTGTACCTCATCTTCTGCTATTTCTG GACCTCAGAGTACATACTGGCGCTGGGTCAGATAGTGGTGGCAATGAGCG TTGCCACGTGGTACTTCACCAGGGAGAAGGGGAGCATCGGGAGCCGCACC GTGCTGAGGTCCATTGGCAGCACGCTGTACTATCACGCAGGTGAGCCTGC TGCAGTCTGTACAGTACTGCTGTTACTGCTGCCGTCTGATGAAGTTTTGA TGAAGTCTTGAGGTAGTATGTCTTGTACCTGACATATGGCATAGTGGCTT TCTAGCAATGAGCAATGCTGCGCCAACATCAAGGCTCAATTAGGTCTGCA GAGTAGAACAATGTGCCGATGTGAGGGCGACTTCTCAACGCGCATGTCAA GGGGTTCAGGTACTCTGGTATGTTTCAACCTAAGAGTGTTAGGCCTGATC ACAGCATTTCGAAGTAGGCAAAATGACCACATTCATTGCTTTGTCGACTT TGTGCCTATAAAATGCATTGCTAGCACAGACGCCAGCAACCACAGCTGCA GTTGCACTGCCAGCTGCTGTCATTGGGCATGTTTCTGACACAGAGCTCCC CCTCTCGCTCTCTGCCCATTCACTGACTTTCACAGGAACGGCAGCATTTG GGTCACTGGTCATAGCCATAATCAAGACCATCCGCACCGTCATCGCATAC CTCCAGAAAAAGGCCAAGGACAGCCACAACAAGCTCCTCTCTGCGCTGCT CTGCTGCATACAGTGCTGCATGTGGTGCCTGGAGAAGTGCATGAAGTTCC TCAACAAGAACGCCTACATCCAGACGGCCATATTCGGCTACAGCTTCTGC AAGGCTGCGCGCAAGGCCTTCTTCCTCATTGCGCGCAACATACTGCGGGT CGCGGCTGTTGGTGAGTGAATGCAGCACACCAGACTGACCGCTTGTCAAG CGCCGCCGCGAAGTTATGTCGTTTCTGTGCTGTTTGATCCACCACATAAG CTGTTGTGCACCTGTACATTTGTCCCGATACTCTTAAACTGTCAAGGCAT CCACAACGCACATGGCAGGCACGCCATAATGCAGAGTAAACTCCGTACCA CGAGCACCTTAGATCTCCTTCATGAAACGTATGCCAGCAGTACACACTGA TGCCTGGTGAACCGAACTGATACAAGTTGGTATGGAAGACGCTCCCACCG CCTGTGGAGCGGTGTGTTTGCCATTGATTAATGTCAACTATTGAGAAGTG TGAAGCTCAAAATATGTCATCCAACAACGTGCACAAAAACATCTAGCGAC CCAATGACACAAGCATGTTGTGCTACGAGACATAATCATGTCGCAAGCCC AATGAACAGATTTAGTAATGGTGTGCAGGTTAGCCTGGCAAGTCATATAC GTTTATTCAACCACAGTAACTGCAAACTGGCACTTGCATCGTATGTTCAT CGGCGTTACACTACAAGGTACAAGCGTGTCATGCTCTCAGATATATCAGC AGCTTGTTGCTCCCTCCCTTACCCCCGCGCACTGCTCCTCCTGCTGCAGG CATGGTATCAGAGCTGGTGGCCATCCTGGGCCTCATATTGGTGCCCCTGG CCTCAGCGCTTGCGTACTACCTAGCAGCGCAAGAGCTCATGGCCGACAAA ATGCACGGGCTCATTGGGCCCACCATCATAGTGGGGATCATCGCCTTCAT CGTCGCACACATGTTCACGCAAGTGTTTGGAATGGCCATCAGCACCATCC TGCAGTGCTTCATTGCAGACGAGGAGATGTTTGAACCAGGCGAAAGGTGA
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Coding sequence (CDS) from alignment at Contig_14:605187..609586-

>mRNA_3181 ID=mRNA_3181|Name=jgi.p|Trimin1|160824|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1857bp|location=Sequence derived from alignment at Contig_14:605187..609586- (Tribonema minus UTEX_B_3156 )
ATGGGACATTATGAGTTGAGTGAGAGGGACAAAAACAATCCGCATAATGC
CAAGCTGGAGGGGTCTCCGGCCTTCAAGGTGGGAGAGCATAGGAGGTGCA
CAGACATGCTCTTCTCGCTCCTGCTCATCGCGTCGTGGGCGGCCATGACT
TTCCTTGGTCTGGTGGTGGTGGGGATAATAGACTCTCCTGAGTTTGAGGC
GGGCAACCCCAAGCGCCTTGTCAACGGCATCGACAATCAAGGGCACATCT
GCGGCGTCGACAAGGCAGTCGCAGACCTGGACAAGTTCTACCCAGTGCCG
AGCGGCACGGGGGTGTGCGTGGCCTCATGCCCCAAAGAGGACAACTATGA
GCGCTTCTATTGCATCAATGACACCACCATTGAGGCAGCGGTCTACAACC
CTGGCAACGACACGTTCAACGCGGAGGTCGCGTGGCAGTACGTGGCGCAG
GGCGACTGCATGTACTACGCAGCATCCACGGACCTCTTCAACTACTGCGT
GTTCGACGCCGCCATCAGCGCCATGAACACCACCGCTGCGTCTGCAGCCG
CTGGCGGCAGCGTGGGCGCACCTGTAATGCTGCCCCTCACCAACTCTGCC
TCATGGCTCACCGACCTAGCCGCTGACCTCATAGCGAGCAAGGCGCTGGT
GCTGGGCATATCGCTGGGTGGCTCGGCGCTGCTTGCGTTCATCTACATCT
GCCTCATGCGCGTGCCGGCGCTGCTGTTCCTGCTGGTGTGGGCGTGCGCG
CTGGGCATTCTGGCGGTGTTCATCGGCGCAGGGCTGGTGCTCATGGACAC
GGCGCAGGCGTGGGATGGGGAGCCGGAGCCGCAGACGCACTCGGACAGCG
AGGCCAAGGCTCTGTTGTACTTCTCATATGTGCTGTTTGCGCTGGGGGGT
CTTTGGGCGCTGCTGCTGCTGTGGCTGCGCAAGCGCATCAACACGGCCAT
CTGCGTGACCAAGGAGGCAGCGCGCGCCGTCAACTCCATGCCGCTGCTGC
TCTTCTTTCCCATCATTCAGACGCTGGGGCTTCTGATTTTCCTGGTCCCG
TGGGCCATCTACGTGGTCTACCTGGCCAGTTCAGGCACCATAACACCTGT
GGAGACACCCAGTGGCGCTACCGTCAAGGCCTTCTCCTACTCTGACAACG
ATCGGTACGCGGGACTGTACCTCATCTTCTGCTATTTCTGGACCTCAGAG
TACATACTGGCGCTGGGTCAGATAGTGGTGGCAATGAGCGTTGCCACGTG
GTACTTCACCAGGGAGAAGGGGAGCATCGGGAGCCGCACCGTGCTGAGGT
CCATTGGCAGCACGCTGTACTATCACGCAGGAACGGCAGCATTTGGGTCA
CTGGTCATAGCCATAATCAAGACCATCCGCACCGTCATCGCATACCTCCA
GAAAAAGGCCAAGGACAGCCACAACAAGCTCCTCTCTGCGCTGCTCTGCT
GCATACAGTGCTGCATGTGGTGCCTGGAGAAGTGCATGAAGTTCCTCAAC
AAGAACGCCTACATCCAGACGGCCATATTCGGCTACAGCTTCTGCAAGGC
TGCGCGCAAGGCCTTCTTCCTCATTGCGCGCAACATACTGCGGGTCGCGG
CTGTTGGCATGGTATCAGAGCTGGTGGCCATCCTGGGCCTCATATTGGTG
CCCCTGGCCTCAGCGCTTGCGTACTACCTAGCAGCGCAAGAGCTCATGGC
CGACAAAATGCACGGGCTCATTGGGCCCACCATCATAGTGGGGATCATCG
CCTTCATCGTCGCACACATGTTCACGCAAGTGTTTGGAATGGCCATCAGC
ACCATCCTGCAGTGCTTCATTGCAGACGAGGAGATGTTTGAACCAGGCGA
AAGGTGA
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