mRNA_3136 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|160624
Unique Name	mRNA_3136
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A836CLF0_9STRA (Protein-tyrosine phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF0_9STRA)

HSP 1 Score: 353 bits (907), Expect = 2.950e-123
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTERELVNLVFVFQQHDVLSQHN 543
            QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTERELVNLVFVFQQHDVLSQHN
Sbjct:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTERELVNLVFVFQQHDVLSQHN 181

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A835Z9L3_9STRA (MAP kinase phosphatase with leucine-rich repeats protein 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L3_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.090e-79
Identity = 120/156 (76.92%), Postives = 138/156 (88.46%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QDN PA+VV  VYIGSIHAAFNQDGL  RGITHVLNASGLPATFPR+FTYFNVD+RD+E+A ILGALGA +VFI+AG EKGGVLVHCAGGRSRSAA IA YLM K  +TFD+A+E L+  RPVVAIN+GFE QLRA+EAT +D+F+S+Q+MLRARV
Sbjct:   15 QDNAPARVVANVYIGSIHAAFNQDGLAQRGITHVLNASGLPATFPRAFTYFNVDIRDREDAAILGALGATAVFIDAGVEKGGVLVHCAGGRSRSAAIIAGYLMAKHAYTFDRALEALRVVRPVVAINKGFEQQLRAFEATRFDLFKSNQMMLRARV 170

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: D7FLE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE7_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.730e-64
Identity = 107/162 (66.05%), Postives = 131/162 (80.86%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTER 486
            QDN+PAKV DR++IGSIHAAFNQD +  RGITHVLNASGLPATFPR FTYF VD+RDKE ++IL A+GA ++F+EAG EKGGVLVHCAGGRSRSAAF+ A++M  Q  ++D A  Q++ ARPV ++NRGFE QLRAY A   DVF +HQ+MLR R +   +R
Sbjct:   16 QDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDR 177

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A024UED3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UED3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.470e-48
Identity = 80/156 (51.28%), Postives = 114/156 (73.08%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QDNLP +V+ ++++GS+HAAFN + +  R ITHVLN SG  AT+P  FTY  VDLRDK+  ++L  +  A+VF+E+G ++GG+LVHCAGGRSRS A + AYLM     +FD A+ +++ ARPVV +N GFE QLR +E    DV+ +HQL+L+ ++
Sbjct:   35 QDNLPCEVIPKLWVGSVHAAFNFEAIKERKITHVLNVSGTIATYPHEFTYLTVDLRDKDYTNLLSCIPIATVFLESGMQQGGILVHCAGGRSRSPAIVIAYLMSALGHSFDDAISKVRIARPVVQLNSGFEDQLRCFEKAKRDVYAAHQLLLQTKI 190

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A067CFV7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV7_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 6.930e-48
Identity = 84/167 (50.30%), Postives = 118/167 (70.66%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTERELVNL 501
            QDN+P++VV ++++GSIHAAFN + +  R ITHVLN SG  AT+P+ FTY  +DLRDKE  ++L  L   +VF+EAG + GGVLVHCAGGRSRS A   AY+M+ Q F + +A  +L++ R VVA+N GFE QL+  E    DVF++HQL+L+ ++ +   R   +L
Sbjct:   17 QDNIPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLTIDLRDKEYTNLLSCLPITTVFLEAGMQNGGVLVHCAGGRSRSPAIAMAYIMLTQGFPYAEAFAKLRSVRSVVALNTGFEDQLQCLEKAQLDVFKAHQLLLQTKMVRARARRAQHL 183

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A1V9ZRS5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRS5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.050e-48
Identity = 82/156 (52.56%), Postives = 118/156 (75.64%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QDNLP++VV ++++GSIHAAFN + +  R ITHVLN SG  AT+P+ FTY  +D+RDKE  +IL  +  A+VF+EAG + GGVLVHCAGGRSRS A   AY+M    F++D A+ +L++ RPVV++N GFE QL+ +E    DVF++HQ++L++++
Sbjct:  401 QDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKI 556

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A0A7CLY8_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CLY8_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.020e-47
Identity = 82/156 (52.56%), Postives = 118/156 (75.64%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QDNLP++VV ++++GSIHAAFN + +  R ITHVLN SG  AT+P+ FTY  +D+RDKE  +IL  +  A+VF+EAG + GGVLVHCAGGRSRS A   AY+M    F++D A+ +L++ RPVV++N GFE QL+ +E    DVF++HQ++L++++
Sbjct:  442 QDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKI 597

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: W7TWT2_9STRA (Dual specificity protein phosphatase 9 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWT2_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.910e-47
Identity = 85/157 (54.14%), Postives = 115/157 (73.25%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKG-GVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QD+LP KV+  +YIGS+H+AFN D L    ITH+LNA+ +P+ FP  FTYFN+ L D E A++L  L AA  FIE   E+G GVLVHC+GGRSRSA+ + AYLM K   TF+ A  +++AARPV+ +N+GFE+QL+AYE    DV+++HQ +LR R+
Sbjct:   18 QDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRL 174

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: A0A6G0WNR0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNR0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.230e-47
Identity = 81/167 (48.50%), Postives = 117/167 (70.06%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTERELVNL 501
            QDN+P +V+ +++IGSIHAAFN + L  R I+HVLN S   AT+P++FTY  VD+RDK+  ++L  +   SVFIEAG  +GG+LVHCAGGRSRS A + AYLM+    +++ A+ +++ ARPVVA+N GFE QLR  E    D++ +HQ +L+ ++ +   R   NL
Sbjct:   25 QDNVPCEVIPKLWIGSIHAAFNLEALHERKISHVLNVSSTVATYPQAFTYLTVDIRDKDYTNLLSCIPITSVFIEAGINQGGILVHCAGGRSRSPAIVMAYLMLTMGLSYEDALTKVRTARPVVALNSGFEDQLRCMEKAKRDIYLAHQWLLQGKIVRARMRRSQNL 191

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BLAST of jgi.p|Trimin1|160624 vs. uniprot
Match: W4G0P6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0P6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.720e-46
Identity = 79/156 (50.64%), Postives = 115/156 (73.72%), Query Frame = 1

Query:    1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARV 468
            QDNLP +VV ++++GS+HAAFN + +  R I+HVLN SG  AT+P+ FTY  VD+RDK+  ++L  +  A+VF+E+G + GGVLVHCAGGRSRS A + AYLM     +FD+A+ +++ ARPV ++N GFE QLR +E    DV+ +HQL+L+ ++
Sbjct:   34 QDNLPCEVVPKLWVGSVHAAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDIRDKDYTNLLSCVPIATVFLESGMQHGGVLVHCAGGRSRSPAIVVAYLMSTLGTSFDEALIKVRTARPVASLNSGFEDQLRCFEKAKRDVYVAHQLLLQTKI 189

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|160624 vs. uniprot

BLAST of jgi.p|Trimin1|160624 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CLF0_9STRA	2.950e-123	100.00	Protein-tyrosine phosphatase-like protein (Fragmen...	[more]
A0A835Z9L3_9STRA	2.090e-79	76.92	MAP kinase phosphatase with leucine-rich repeats p...	[more]
D7FLE7_ECTSI	2.730e-64	66.05	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A024UED3_9STRA	5.470e-48	51.28	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A067CFV7_SAPPC	6.930e-48	50.30	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A1V9ZRS5_9STRA	7.050e-48	52.56	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A0A7CLY8_9STRA	1.020e-47	52.56	Secreted protein n=1 Tax=Thraustotheca clavata Tax...	[more]
W7TWT2_9STRA	1.910e-47	54.14	Dual specificity protein phosphatase 9 n=2 Tax=Nan...	[more]
A0A6G0WNR0_9STRA	7.230e-47	48.50	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W4G0P6_9STRA	1.720e-46	50.64	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_14	contig	Contig_14:221904..223097 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|160624\|e_gw1.14.37.1
Description	protein tyrosine/serine/threonine phosphatase activity
COG category	T
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG2453@1\|root,KOG1716@2759\|Eukaryota
Evalue	4.48e-65
Seed ortholog	2880.D7FLE7
Hectar predicted targeting category	other localisation
TranscriptId	160946
Track	FilteredModels1
ProteinId	160624

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160624	gene_3136	Tribonema minus UTEX_B_3156	gene	Contig_14 221904..223097 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160624	Trimin1\|160624\|e_gw1.14.37.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_14 221904..223097 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3136_2	exon_3136_2	Tribonema minus UTEX_B_3156	exon	Contig_14 221904..222065 -
exon_3136_1	exon_3136_1	Tribonema minus UTEX_B_3156	exon	Contig_14 222714..223097 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3136	CDS_3136	Tribonema minus UTEX_B_3156	CDS	Contig_14 222714..223097 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_14:221904..223097-
coding sequence from alignment at Contig_14:221904..223097-

spliced messenger RNA

>mRNA_3136 ID=mRNA_3136|Name=jgi.p|Trimin1|160624|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_14:221904..223097- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGGACAACTTGCCCGCCAAGGTGGTGGACAGGGTCTACATAGGCAGCAT
CCATGCAGCCTTCAACCAGGACGGTCTGCTGGCCAGAGGCATCACGCATG
TCCTCAACGCCTCGGGGCTGCCAGCCACCTTCCCTCGCAGCTTCACCTAC
TTCAATGTGGACCTCCGAGACAAAGAAGAGGCTGACATACTGGGCGCGCT
GGGTGCCGCCAGCGTCTTCATAGAAGCAGGCACTGAGAAGGGGGGGGTGC
TGGTGCACTGCGCTGGGGGCCGGAGTCGGAGCGCCGCTTTCATTGCGGCA
TATCTCATGATGAAGCAGGACTTCACGTTCGACCAGGCGGTGGAGCAGCT
CAAAGCCGCCCGCCCAGTGGTGGCAATCAATCGGGGGTTTGAGCTGCAGC
TGCGGGCGTACGAGGCGACCGGCTACGACGTGTTCCAGTCGCATCAGCTG
ATGCTCAGGGCTCGGGTAAGCCAAAATACAGAGAGGGAATTGGTGAATCT
GGTCTTCGTCTTCCAACAGCATGATGTTCTAAGTCAACACAACTAG

protein sequence of jgi.p|Trimin1|160624

>Trimin1|160624|e_gw1.14.37.1 ID=Trimin1|160624|e_gw1.14.37.1|Name=jgi.p|Trimin1|160624|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTY
FNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAA
YLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQL
MLRARVSQNTERELVNLVFVFQQHDVLSQHN*

mRNA from alignment at Contig_14:221904..223097-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3136 ID=mRNA_3136|Name=jgi.p|Trimin1|160624|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1194bp|location=Sequence derived from alignment at Contig_14:221904..223097- (Tribonema minus UTEX_B_3156 )
CAGGACAACTTGCCCGCCAAGGTGGTGGACAGGGTCTACATAGGCAGCAT
CCATGCAGCCTTCAACCAGGACGGTCTGCTGGCCAGAGGCATCACGCATG
TCCTCAACGCCTCGGGGCTGCCAGCCACCTTCCCTCGCAGCTTCACCTAC
TTCAATGTGGACCTCCGAGACAAAGAAGAGGCTGACATACTGGGCGCGCT
GGGTGCCGCCAGCGTCTTCATAGAAGCAGGCACTGAGAAGGGGGGGGTGC
TGGTGCACTGCGCTGGGGGCCGGAGTCGGAGCGCCGCTTTCATTGCGGCA
TATCTCATGATGAAGCAGGACTTCACGTTCGACCAGGCGGTGGAGCAGCT
CAAAGCCGCCCGCCCAGTGGTGGCAATCAATCGGGTGAGTACAATAGCAG
CTGCTGCTAACGCGAGCTAGGAACGAAGAGGGGAACCAGATTTCTGCATT
TCAGCAGAAGTTGAAGTTGCGGACTATTCGGTGTTACCCAACAGTGGTGG
CAGCTCTTGCAAGAGCCTTTGTTGCCTTTGCTGCCGACCAACACGTATCT
TCTTGTTCTTAACTTGCTTACATGGCCAAGAAAGGTCGGCGCTTCACGCT
GCTGATGCAACTGTTGTAAATACAAAGACTGCACCCTACAGCAACATTGG
CACTGCTGGTCCCTGTACAGCCTGCTGGTACAGGCGGTGTTGTTGCGTGT
GCTGACGACAACAACAGCATCGGCGCATTCAATGGTGAGATGCTGTGGAG
CATGCCAACGACCACAGACTCGTTGCAGCAGCGGTTTCAGGCATGTTTGT
GCAGCAGTGCTCTCCCCATGGTTGAGCTGTTCAGCGCTGACTACCTCCTG
TGATGCCCTTTTGTGAGCATCAGTCGCTCCCAGGGGGCGCACGACTACGT
TCCGTTGTGCCGGTGAGGGGCAAGCATGATTACTACAGTCCTGCATGTTC
ACCTCTTGAGCAACTTCCTGGTACTTCAAGTGTGTACTCAGCGGTTCCTT
CTCATGGTGTCGCCGCGCATCGCCATCATCAGGGGTTTGAGCTGCAGCTG
CGGGCGTACGAGGCGACCGGCTACGACGTGTTCCAGTCGCATCAGCTGAT
GCTCAGGGCTCGGGTAAGCCAAAATACAGAGAGGGAATTGGTGAATCTGG
TCTTCGTCTTCCAACAGCATGATGTTCTAAGTCAACACAACTAG

Coding sequence (CDS) from alignment at Contig_14:221904..223097-

>mRNA_3136 ID=mRNA_3136|Name=jgi.p|Trimin1|160624|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_14:221904..223097- (Tribonema minus UTEX_B_3156 )
CAGGACAACTTGCCCGCCAAGGTGGTGGACAGGGTCTACATAGGCAGCAT
CCATGCAGCCTTCAACCAGGACGGTCTGCTGGCCAGAGGCATCACGCATG
TCCTCAACGCCTCGGGGCTGCCAGCCACCTTCCCTCGCAGCTTCACCTAC
TTCAATGTGGACCTCCGAGACAAAGAAGAGGCTGACATACTGGGCGCGCT
GGGTGCCGCCAGCGTCTTCATAGAAGCAGGCACTGAGAAGGGGGGGGTGC
TGGTGCACTGCGCTGGGGGCCGGAGTCGGAGCGCCGCTTTCATTGCGGCA
TATCTCATGATGAAGCAGGACTTCACGTTCGACCAGGCGGTGGAGCAGCT
CAAAGCCGCCCGCCCAGTGGTGGCAATCAATCGGGGGTTTGAGCTGCAGC
TGCGGGCGTACGAGGCGACCGGCTACGACGTGTTCCAGTCGCATCAGCTG
ATGCTCAGGGCTCGGGTAAGCCAAAATACAGAGAGGGAATTGGTGAATCT
GGTCTTCGTCTTCCAACAGCATGATGTTCTAAGTCAACACAACTAG