mRNA_3114 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347880
Unique NamemRNA_3114
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836CKH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH2_9STRA)

HSP 1 Score: 671 bits (1732), Expect = 5.240e-243
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1
Query:    1 MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW 1068
            MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW
Sbjct:    1 MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW 356          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836CNZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNZ7_9STRA)

HSP 1 Score: 662 bits (1709), Expect = 3.550e-238
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 2
Query:  167 MLIRSVCPLAGVSPEKITGQAARRRLPTSGAASSASDVGSGSDSLSAAPXXXXXXXXXTVLSSLPPTAVSSGTXXXXXXXXXXXXXXXXGKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRALTAPPRVFRNAV 1282
            MLIRSVCPLAGVSPEKITGQAARRRLPTSGAASSASDVGSGSDSLSAAPXXXXXXXXXTVLSSLPPTAVSSGTXXXXXXXXXXXXXXXXGKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRALTAPPRVFRNAV
Sbjct:    1 MLIRSVCPLAGVSPEKITGQAARRRLPTSGAASSASDVGSGSDSLSAAPXXXXXXXXXTVLSSLPPTAVSSGTXXXXXXXXXXXXXXXXGKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRALTAPPRVFRNAV 372          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836CL50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL50_9STRA)

HSP 1 Score: 315 bits (808), Expect = 1.820e-102
Identity = 160/271 (59.04%), Postives = 200/271 (73.80%), Query Frame = 2
Query:  440 FAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTP-LPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTG-ANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRA 1246
            F+IQLVK GDSD AYD +ME A+ RW+ +IVGDV DI G+ S+  FLD F  +  TP +P V+++DDIVIGYQFA +DG G        LG T +IQ+R  DIG+FP++A M FD+AD+  M ++G F+ VV+HEMGHALGFS+DMW ++ S+CG +C VFDAG P+GC AS  YK LGLPG+L L  SG   DGSYCAHWDEATLGDELMTP + TG ANPLTAITIAAFED GY V+Y  A+   LISP  A  ++  V+R L++RR+A
Sbjct:   24 FSIQLVKFGDSDPAYDKFMEAARDRWQNVIVGDVYDIRGVSSDQLFLDVFKGIKPTPEIPGVVDIDDIVIGYQFAKMDGRGEV------LGGTFIIQSRTDDIGAFPVSAAMTFDIADVKAMAKDGSFETVVLHEMGHALGFSADMWASFESKCGKTCKVFDAGTPHGCKASDKYKALGLPGQLALDHSGKPKDGSYCAHWDEATLGDELMTPYMNTGGANPLTAITIAAFEDMGYTVNYDAADSAELISPAPANWREHTVSRMLQRRRQA 288          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835ZDU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU9_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.120e-89
Identity = 152/285 (53.33%), Postives = 191/285 (67.02%), Query Frame = 2
Query:  434 GKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGD-VVDIVG--MPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQS---PVNRALRQRRRALTAPPRVF 1270
            GK+ I+LVK+GDSDA YDA+  +AK RWE II GD V+DI     P +  F +FF ++     P +  VDDI I Y+ + IDG G        LG T++I+ R    GSFPI+A M FD  D+D MI +G+F+  ++HEMGHALGFS++MW  YAS+CG SCA FD GAP GC AS+TY  LGLPG+L + ++G +GDG YC HWDE  LGDELMTPV+G+G  PLTAI+I+AFED GY VSY TA  I LI+ V A   QS   P  R+L  RR+  T  PR F
Sbjct:   75 GKYNIELVKIGDSDAKYDAFFAKAKQRWEQIITGDNVMDIPADKAPEDGWFSNFFEELE----PYIAAVDDITIAYRISPIDGYGLV------LGETSIIRFRTEQYGSFPISAAMTFDTEDVDGMIDDGVFESTILHEMGHALGFSANMWALYASKCGASCAAFDEGAPGGCAASRTYARLGLPGQLRMHAAGGSGDGQYCGHWDELQLGDELMTPVVGSGMQPLTAISISAFEDMGYLVSYETAAPIELITTVPAEWSQSATLPFTRSLLSRRKRSTFVPRAF 349          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835Z0U7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U7_9STRA)

HSP 1 Score: 265 bits (676), Expect = 9.460e-78
Identity = 146/303 (48.18%), Postives = 182/303 (60.07%), Query Frame = 2
Query:  434 GKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFF-TDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFD-------------VVVMHE------------------MGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTG--ANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRR 1240
            G F IQL+K GD DA YD +MERA ARW  +IVGDV D+ G  +   F DFF  + P  PLP  ++VDDI+IGYQ A IDG       LN +G+TA +  RP + GSFP +AGM FD AD D  I +G  D              V++HE                  MGHALGF+  +WP Y SQCGTSC  F  GAPNGC+ASQ + +LG  G L +   G+  DGS+C+HWDE  LG+ELMTP I      +PLT ITIAA+ED GY+VSYA+A+ I+ + P  A  K +P+NR L  RR
Sbjct:  419 GDFNIQLLKFGDGDAKYDVFMERAAARWMQVIVGDVQDMPGNSAADLFQDFFGANAPAQPLPDSIDVDDIIIGYQIAPIDG------PLNVVGSTAALAVRPPEYGSFPYSAGMTFDSADADAAIADGTSDXXXXXXXXXXXXXAVILHEXXXXXXXXXXXXXXXXXXMGHALGFAESLWPLYPSQCGTSCTYFATGAPNGCLASQKFTELGFDGPLPMYFQGSPNDGSFCSHWDETVLGNELMTPGIAEAEVTSPLTEITIAAYEDIGYQVSYASADPISQVVPAQARWKDTPLNRMLAARR 715          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835YMD2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD2_9STRA)

HSP 1 Score: 254 bits (650), Expect = 2.420e-74
Identity = 140/271 (51.66%), Postives = 176/271 (64.94%), Query Frame = 2
Query:  434 GKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRA 1246
            G + I+LV +G  +A YD YM RAK RWE +I+GDV D+ G+  + A    F  +P     ++++VDDIVI Y+FA IDG G T    NTLG+T V Q R A  G  P++A M+FD  D+D  I+EG F  V +HEMGHALGF S  +  +AS+CGTSC V+D G P GC AS  + +LGL G+L +Q  G  GDGSYC+HW E  LGDELMTP      NPLTAITI AFED  Y+VSY +A+ I  I+P  A  K S  NR L+QRR A
Sbjct:  397 GNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFR-LPPNVGNQLVDVDDIVILYEFAQIDG-GGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGS--FNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREA 663          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835YMK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK8_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.170e-69
Identity = 136/283 (48.06%), Postives = 174/283 (61.48%), Query Frame = 2
Query:  437 KFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVF--DAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIG-TGANPLTAITIAAFED----------CGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRA 1246
            +F I LV VG+ +  YD +ME AK RWEA+IVGDV D+ G P+   F  +        +P + +VDDI+I YQFA IDG G+++  +  LG T + + R A  GSFPI+A M FD A++D  I  G FDVVV+HEM HALGF       + S CGTSC  +  +AGA +GC+AS  Y +LG    L ++  G  GDGSYC HWDE  LGDELMTP I  +G NPLT +TIA+FED          CG  VSY  A+ +  ISP+  G + +  NR LRQRR A
Sbjct:  119 RFNIVLVNVGEPNPKYDQFMEGAKLRWEAVIVGDVPDLPGFPTADLFGGYL-QYEGDGVPDMTDVDDIIIAYQFAPIDGFGDSSGDM--LGTTMITKYRDASQGSFPISAQMTFDTANVDADIDAGAFDVVVLHEMAHALGFGDWATGKFTSPCGTSCLDYASNAGA-DGCIASTKYAELGYMDPLLVEFGGAPGDGSYCCHWDEGQLGDELMTPGINYSGYNPLTMLTIASFEDLGYVVSSQSLCGAAVSYDAADPMDAISPLGVGWRHTRANRHLRQRREA 397          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835YWX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX7_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.560e-61
Identity = 127/290 (43.79%), Postives = 162/290 (55.86%), Query Frame = 2
Query:  494 MERAKARWEAIIVGDVVDIVGM-----PSEFAFL----------------------------------DFFTDVPQT-PLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRR 1243
            M  AKARWEAI+VGDVVD+  +     P+  AF+                                  D +T   Q   L  V+ VDDIVI Y+FA +DGLG++    NTLG+T +   R       PI+A + FDVAD+D  I  G F  VV+HEMGHALGF    +  Y S+CGT+C V++A AP+GCVA+  Y++LG   EL +   G   DGSYC+HW E  LGDELM+P I    NPLTAI+IA   D GY+V Y TA+ I  IS + A  K SP N  L +R+R
Sbjct:    1 MLAAKARWEAIVVGDVVDVATLSRESAPANDAFVLXXXXXXXXXXXXXXXXXXALWYAELLGVSSSSYDVYTSGGQPLNLTDVIPVDDIVIAYEFAQMDGLGDSDG--NTLGSTLLTSFRDVSNSGLPISAFLKFDVADVDAFIAAGTFQAVVLHEMGHALGFG--YFSNYPSRCGTTCVVYEASAPHGCVAAAKYRELGFADELLVHFDGEPSDGSYCSHWYEGQLGDELMSPFISDAHNPLTAISIAGMADMGYQVVYDTADPIDTISHLTAALKASPTNTRLARRQR 286          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836C8X7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.260e-39
Identity = 94/257 (36.58%), Postives = 132/257 (51.36%), Query Frame = 2
Query:  440 FAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGM--PSEFAFLDFF---TDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDL---------GLPGELTLQSSGTA-GDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAE 1165
            F I L+ +G + A Y  Y E+AK RWE I+VGD++       P    F  +F   +D           VDDIVIGY+   IDG          +   A      A     PI+A M FD AD+D +I+ G F  VV+HEMGHALG     WP   ++CG +C  +  GA   CVA   ++ L          + G L L+++G +  DG+ C HW E  LGDE+MT  I +  NP++ +++ A ED GY+V+Y  A+
Sbjct:   31 FDITLLPIGKTPAKYHKYFEKAKKRWEEIVVGDMIGYTAKEAPDSGWFGGYFGKGSDFHGA-------VDDIVIGYKIRAIDGKNKVVGNSEIIKERAGRAAHKARQQQTPISAVMEFDSADVDDLIKTGYFQTVVLHEMGHALGIGY-AWPTPRAKCGGTCTAYQEGANWDCVAELKFRHLVTSRPDLKIDITGGLQLENTGASKADGTACEHWSETQLGDEIMTAYISSTDNPISIVSVGALEDLGYKVNYKAAD 279          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836CQF3_9STRA (Cation_ATPase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQF3_9STRA)

HSP 1 Score: 142 bits (358), Expect = 7.200e-33
Identity = 101/280 (36.07%), Postives = 141/280 (50.36%), Query Frame = 2
Query:  440 FAIQLVKVGDSDAAYDAYMERAKARWEA------IIVGDVVDIVGMPSEF-AFLDFFTDVPQTPLPRVM-------NVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAV------------FDAGAPNGCVASQTYK--DLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAA 1195
            F IQL+    +   Y  Y  +AKARW+A      +IVGDV+D+    +    + D       +   R++       NVDDIVIGY+   IDG      Q  +        +  A     PI+  M FD AD D +I+EG+FD VV+HEMGH LG  +  WP   ++CG SC V            + +GA   C A Q ++  DLG+   L L++ G  G  + C HW E  LG+ELMT  +  G NPL+ ITI A  D GY+V Y+ A+   + + +AA
Sbjct:  136 FNIQLIAADGTPDKYHEYFAKAKARWQAKARRQQVIVGDVLDVPKSTTPVNGWFDGNLGTMGSGGQRIVATNEYYGNVDDIVIGYKITYIDGKNGVLGQAGSTYVRGGNVSHDASQMDIPISGTMEFDSADADELIKEGVFDQVVLHEMGHVLGIGN--WPTTLNRCG-SCEVKHATCGDACEPYYTSGATGACHAQQQFEKLDLGVGPNLLLETKG--GISTECTHWSEEQLGNELMTGWLD-GNNPLSTITIGALHDLGYQVDYSVADPFEIQAAMAA 409          
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A835Z348_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z348_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.190e-30
Identity = 92/261 (35.25%), Postives = 123/261 (47.13%), Query Frame = 2
Query:  440 FAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMP-----SEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCG--TSCAV-----FDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGA--NPLTAITIAAFEDCGYEVSYATAEDIALI 1180
            F IQL+    +     A  E AKARWE +I GD+ D+  +       E    D F+            VDD+VIGY+ A+IDG  NT             +    D+ + PI+  M FD  DI   +  G     V+HEMGH LG  ++ WP  A  CG   SC       + +GA   C A   YK++   G L L+++ T  +GS C+HW EA L  ELMTP        +PLT +TI A  D GY V Y  A+  A +
Sbjct:  118 FNIQLIAATGTPPEVVAVFEEAKARWEQVITGDIPDVAAVDFDWFNGEMGDADAFSGA----------VDDVVIGYRVASIDGADNTLANAGP----RFFRNSDEDMYTRPISGVMTFDEIDIQSQLAAGTLLPTVLHEMGHVLGLGTN-WPTPAG-CGQVASCKSGTPFQYASGATGDCYADLKYKEIVSGGILMLETA-TGDEGSDCSHWSEAQLQSELMTPSTSLSGVPDPLTIVTIGAMRDLGYSVDYTAADSFAAL 361          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKH2_9STRA5.240e-243100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|347880 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNZ7_9STRA3.550e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CL50_9STRA1.820e-10259.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDU9_9STRA1.120e-8953.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0U7_9STRA9.460e-7848.18Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A835YMD2_9STRA2.420e-7451.66Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A835YMK8_9STRA1.170e-6948.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWX7_9STRA5.560e-6143.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8X7_9STRA4.260e-3936.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQF3_9STRA7.200e-3336.07Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A835Z348_9STRA1.190e-3035.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1447645..1448742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347880|estExt_Genemark1.C_Ctg_160188
Hectar predicted targeting categoryother localisation
TranscriptId348202
TrackFilteredModels1
ProteinId347880
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347880gene_3114Tribonema minus UTEX_B_3156 geneContig_16 1447645..1448742 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3114_1exon_3114_1Tribonema minus UTEX_B_3156 exonContig_16 1447645..1448742 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3114UTR3_3114Tribonema minus UTEX_B_3156 three_prime_UTRContig_16 1447645..1447671 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3114CDS_3114Tribonema minus UTEX_B_3156 CDSContig_16 1447672..1448742 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347880Trimin1|347880|estExt_Genemark1.C_Ctg_160188Tribonema minus UTEX_B_3156 polypeptideContig_16 1447672..1448742 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3114 ID=mRNA_3114|Name=jgi.p|Trimin1|347880|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1098bp|location=Sequence derived from alignment at Contig_16:1447645..1448742- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTAGGGAGGCCTGGGACCTCTCGAAGTCCGTCAGGGCGGAGAGCCG
GCCCCGCGTGGTGTTCGAACTGCGCGAGGACGAGGAGAGCGAGGCCGCGT
ACTGCCGGGCCCTGACGTCGAAGCGGATAGTCGCGCTGACGCTCCGCGAC
GGCGCCCCGCTGCCGTCGCCGCTGCCCGCGAGGGGGGTCCTGCGCCAGTT
GGTGCTGACGGACGGGTGTGCCGAGGGGCGCCCCGCCCCGCCCCTCGAGG
CCCTGGGCGCCCTGGCCGCCCCCCTGGATCTGCTGTCCCTGTTCTGCTGC
TGCGACGCGGCGTGGGCCCACGCGGCGCTGGCGAGGCTCCCCCCCCGGGG
CTTCGCCGTCGGGACCCTCGAGGTGTCCGCGACGTCGTTCCCGGAGGGAG
CTCTGAGGGGGTTCGCGGGGTCCGCGGAGACGCTGCGGGCGGCGCGCAGG
GGGGTGCGGGGGGGGGTCGACGACGCGCAGGGACTGGACCTCGACGGCGT
CCGCGCGCGGCGCGTCGAGCTCCGCGGCGCCCTGTACCCCGCGCGCCTGC
CGCGGAGGGCGAGGGAGCTGACGGCGGAGCTGGCGCCCGTCCTGACCCCC
GCGGACGAGTGGAGGGGGGCCCTGAGCCTCAGGCGCCTGCGGTTCGTCGG
CTGCCGGTTCCCGGCCTCGCTGGCGCTGCCCCCGGGGCTCGAGTCGCTGA
CGGTCGTCCGCAGCGGCGAGACGACGGAGGCCTACTGGTACGGCCCGACG
TGGCGCGAGGGTCTCGAACTCAGGCTCGTCGCCTCGGACGCGGACGGGGG
AGGGACGGCCCTTCCCCCGGCCCTGAGCCTCACGGTGAGGGGGTACCGCG
TCGTCGACGCCCCCCCTGCCCTGCTGGCCAGGTGGGGGGCGGAGGGCAGG
GACCGCTGGGACCTGGTGGACCTGACGGGTAGCGACGGCGGCGACGACGC
CGTAGAGAGCGAGAGCGACGCGTCAGAGAGCGAGAGCGAGAGCGACGAGG
GCAGGGCAGTGGGGGAGCCCGAGCACGCCGCGGGCGGAGGGCTGACGGAC
GACGAGGCTCAGGGCTGGTAGCATATGAATCATTATTGAAACCCCGCG
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protein sequence of jgi.p|Trimin1|347880

>Trimin1|347880|estExt_Genemark1.C_Ctg_160188 ID=Trimin1|347880|estExt_Genemark1.C_Ctg_160188|Name=jgi.p|Trimin1|347880|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=357bp
MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRD
GAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCC
CDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARR
GVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTP
ADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPT
WREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGR
DRWDLVDLTGSDGGDDAVESESDASESESESDEGRAVGEPEHAAGGGLTD
DEAQGW*
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mRNA from alignment at Contig_16:1447645..1448742-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3114 ID=mRNA_3114|Name=jgi.p|Trimin1|347880|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1098bp|location=Sequence derived from alignment at Contig_16:1447645..1448742- (Tribonema minus UTEX_B_3156 )
ATGCCTAGGGAGGCCTGGGACCTCTCGAAGTCCGTCAGGGCGGAGAGCCG GCCCCGCGTGGTGTTCGAACTGCGCGAGGACGAGGAGAGCGAGGCCGCGT ACTGCCGGGCCCTGACGTCGAAGCGGATAGTCGCGCTGACGCTCCGCGAC GGCGCCCCGCTGCCGTCGCCGCTGCCCGCGAGGGGGGTCCTGCGCCAGTT GGTGCTGACGGACGGGTGTGCCGAGGGGCGCCCCGCCCCGCCCCTCGAGG CCCTGGGCGCCCTGGCCGCCCCCCTGGATCTGCTGTCCCTGTTCTGCTGC TGCGACGCGGCGTGGGCCCACGCGGCGCTGGCGAGGCTCCCCCCCCGGGG CTTCGCCGTCGGGACCCTCGAGGTGTCCGCGACGTCGTTCCCGGAGGGAG CTCTGAGGGGGTTCGCGGGGTCCGCGGAGACGCTGCGGGCGGCGCGCAGG GGGGTGCGGGGGGGGGTCGACGACGCGCAGGGACTGGACCTCGACGGCGT CCGCGCGCGGCGCGTCGAGCTCCGCGGCGCCCTGTACCCCGCGCGCCTGC CGCGGAGGGCGAGGGAGCTGACGGCGGAGCTGGCGCCCGTCCTGACCCCC GCGGACGAGTGGAGGGGGGCCCTGAGCCTCAGGCGCCTGCGGTTCGTCGG CTGCCGGTTCCCGGCCTCGCTGGCGCTGCCCCCGGGGCTCGAGTCGCTGA CGGTCGTCCGCAGCGGCGAGACGACGGAGGCCTACTGGTACGGCCCGACG TGGCGCGAGGGTCTCGAACTCAGGCTCGTCGCCTCGGACGCGGACGGGGG AGGGACGGCCCTTCCCCCGGCCCTGAGCCTCACGGTGAGGGGGTACCGCG TCGTCGACGCCCCCCCTGCCCTGCTGGCCAGGTGGGGGGCGGAGGGCAGG GACCGCTGGGACCTGGTGGACCTGACGGGTAGCGACGGCGGCGACGACGC CGTAGAGAGCGAGAGCGACGCGTCAGAGAGCGAGAGCGAGAGCGACGAGG GCAGGGCAGTGGGGGAGCCCGAGCACGCCGCGGGCGGAGGGCTGACGGAC GACGAGGCTCAGGGCTGGTAGCATATGAATCATTATTGAAACCCCGCG
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Coding sequence (CDS) from alignment at Contig_16:1447645..1448742-

>mRNA_3114 ID=mRNA_3114|Name=jgi.p|Trimin1|347880|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1071bp|location=Sequence derived from alignment at Contig_16:1447645..1448742- (Tribonema minus UTEX_B_3156 )
ATGCCTAGGGAGGCCTGGGACCTCTCGAAGTCCGTCAGGGCGGAGAGCCG
GCCCCGCGTGGTGTTCGAACTGCGCGAGGACGAGGAGAGCGAGGCCGCGT
ACTGCCGGGCCCTGACGTCGAAGCGGATAGTCGCGCTGACGCTCCGCGAC
GGCGCCCCGCTGCCGTCGCCGCTGCCCGCGAGGGGGGTCCTGCGCCAGTT
GGTGCTGACGGACGGGTGTGCCGAGGGGCGCCCCGCCCCGCCCCTCGAGG
CCCTGGGCGCCCTGGCCGCCCCCCTGGATCTGCTGTCCCTGTTCTGCTGC
TGCGACGCGGCGTGGGCCCACGCGGCGCTGGCGAGGCTCCCCCCCCGGGG
CTTCGCCGTCGGGACCCTCGAGGTGTCCGCGACGTCGTTCCCGGAGGGAG
CTCTGAGGGGGTTCGCGGGGTCCGCGGAGACGCTGCGGGCGGCGCGCAGG
GGGGTGCGGGGGGGGGTCGACGACGCGCAGGGACTGGACCTCGACGGCGT
CCGCGCGCGGCGCGTCGAGCTCCGCGGCGCCCTGTACCCCGCGCGCCTGC
CGCGGAGGGCGAGGGAGCTGACGGCGGAGCTGGCGCCCGTCCTGACCCCC
GCGGACGAGTGGAGGGGGGCCCTGAGCCTCAGGCGCCTGCGGTTCGTCGG
CTGCCGGTTCCCGGCCTCGCTGGCGCTGCCCCCGGGGCTCGAGTCGCTGA
CGGTCGTCCGCAGCGGCGAGACGACGGAGGCCTACTGGTACGGCCCGACG
TGGCGCGAGGGTCTCGAACTCAGGCTCGTCGCCTCGGACGCGGACGGGGG
AGGGACGGCCCTTCCCCCGGCCCTGAGCCTCACGGTGAGGGGGTACCGCG
TCGTCGACGCCCCCCCTGCCCTGCTGGCCAGGTGGGGGGCGGAGGGCAGG
GACCGCTGGGACCTGGTGGACCTGACGGGTAGCGACGGCGGCGACGACGC
CGTAGAGAGCGAGAGCGACGCGTCAGAGAGCGAGAGCGAGAGCGACGAGG
GCAGGGCAGTGGGGGAGCCCGAGCACGCCGCGGGCGGAGGGCTGACGGAC
GACGAGGCTCAGGGCTGGTAG
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