mRNA_3045 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A835ZBZ1_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ1_9STRA) HSP 1 Score: 483 bits (1242), Expect = 7.690e-172 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
Query: 1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK 741
MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK
Sbjct: 1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK 247
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A814Y464_ADIRI (Hypothetical protein n=5 Tax=Adineta ricciae TaxID=249248 RepID=A0A814Y464_ADIRI) HSP 1 Score: 144 bits (364), Expect = 9.240e-38 Identity = 80/236 (33.90%), Postives = 136/236 (57.63%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPS-ITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P+ P +T + E +++ SL +MG + +DLLQ W D+ N ++ DAL L ELQ GK++H+G+ +F+ LK+ G + SN ++ S+I+ P ++ C+ N++L+ + GGLLSD++L +S+ +A L A ++ + + I +W G W FQ LL R + +KY+ +IA VAIR +LD PA+G ++G L ++ QD K + LD D ++ ++
Sbjct: 89 WVPH---PTAMTKTVVEQSINKSLTKMGMNSLDLLQFHWWDYGNNSYLDALRYLSELQSEGKIKHLGLTNFDTKRLKQIYEAGITIVSNQVQYSIIDRRPEVSMVPFCQQNNIKLLTYGTVCGGLLSDKYLNQSEPRSADLITASLKKYKNMIDRWGG-----WQLFQELLTALRRIGDKYNVSIANVAIRYILDKPAVGGVIVGVRLGKSEHL--QDTAKVSQFILDTDDVEQIE 314
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: UPI00199E456F (Aldo/keto reductase n=1 Tax=Chloroflexales bacterium TaxID=2725990 RepID=UPI00199E456F) HSP 1 Score: 141 bits (356), Expect = 1.550e-36 Identity = 78/217 (35.94%), Postives = 127/217 (58.53%), Query Frame = 1
Query: 1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETS 648
M + W P RP + L E A++ SL RMG + +DLLQ W D+ NPA+ DAL L L+ AGK+RH+ + +F+ L+ +G +V SN ++ S+++L P+Q + C+ V L+A L GGLL++R+L + + A L+ A +R + + GG WD FQ LL ++ ++ ATIA+VA+R +LD PA+ ++G+ L +++
Sbjct: 86 MQAFTKWVP---RPGPMPRPLVEAAINQSLRRMGVETLDLLQFHWWDYSNPAYLDALGHLAALRDAGKIRHLALTNFDTQRLEIIAQHGIRVVSNQVQFSLVDLRPTQRMAAFCQQHGVALLAYGTLCGGLLTERFLGRPEPTRAELNTASLRKYKQMVDLWGG----WDLFQELLSALNGIAARHGATIASVAVRAILDQPAVAGVIVGARLGQSA 295
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A816AK58_9BILA (Hypothetical protein n=8 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A816AK58_9BILA) HSP 1 Score: 139 bits (351), Expect = 8.040e-36 Identity = 78/235 (33.19%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P +P IT +L E+ ++ SL RMG + IDLLQ W D+ + ++ DAL L ELQ+ GK++H+G+ +F+ LK G ++ SN ++ S+I+ P ++ C+ N++L+ + GG LS+++L K + L+ ++ + ++ GG W FQ LL ++++ K+S +IA VA+R +LD P +G +IG+ L + QD K E +LD D + +D
Sbjct: 92 WVP---QPTKITKKLVEENINKSLTRMGVESIDLLQFHWWDYRDNSYLDALRYLSELQKEGKIKHLGLTNFDTERLKIIHEAGIKIVSNQVQYSIIDRRPEVHMIPFCQQNNIKLLTYGTVCGGFLSEKYLGKPEPRAGDLTTISLKKYKNMVDKWGG----WQLFQELLTVLKQIANKHSVSIANVAVRYILDKPTVGGVIIGARLGLSEHL--QDNAKVFEFNLDADDNEKID 317
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A813SWT9_9BILA (Hypothetical protein n=8 Tax=Adineta steineri TaxID=433720 RepID=A0A813SWT9_9BILA) HSP 1 Score: 139 bits (350), Expect = 1.130e-35 Identity = 80/236 (33.90%), Postives = 133/236 (56.36%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPS-ITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P +P +T +L E+ ++ SL RM + IDLLQ W D+ N ++ DAL L ELQ+ GK++H+G+ +F+ LK G ++ SN ++ S+I+ P ++ C+ N++L+ + GGLLS+++L K + L+ + ++ + + I W G W FQ LL +++ KY+ +IA VAIR +LD P +G +IG+ L + QD K E SLD D + ++
Sbjct: 92 WVP---QPTQMTKKLVEENINKSLRRMQVESIDLLQFHWWDYGNNSYLDALRYLSELQKEGKIKHLGLTNFDTQRLKIIHEAGIKIVSNQVQFSIIDRRPEVHMIPFCQQHNIKLLTYGTVCGGLLSEKYLGKPEPRKEELNTSSLKKYKNMIDNWGG-----WQLFQELLNVLKQIGNKYNVSIANVAIRYILDKPTVGGVIIGARLGISEHI--QDNAKVYEFSLDTDDTEKIE 317
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A2E2DVQ2_9CHLR (Aldo/keto reductase n=4 Tax=Chloroflexi TaxID=200795 RepID=A0A2E2DVQ2_9CHLR) HSP 1 Score: 139 bits (350), Expect = 1.150e-35 Identity = 82/235 (34.89%), Postives = 130/235 (55.32%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P RP +T + E AVD SL RM D +DLLQ W ++++ ++ DAL L +L+ GK+RH+ + +F+ LK G+G ++ SN ++ S+I+ P + C Q + L+A L GGLLSDR+L + ++L+ A + + + GG W+ FQ LL R V++K+ IA VA+R VLD PA+ A++G L + + + D + E +LD L +D
Sbjct: 92 WVP---RPGPMTRGVVEQAVDVSLRRMDTDRLDLLQFHWWEYQDESYLDALSHLSDLRDEGKIRHVALTNFDTERLKRIAGHGIKIVSNQVQFSLIDRRPEVEMAQFCLDQGIHLLAYGTLCGGLLSDRYLRTPEPSRSALNTASLSKYKQMVDAWGG----WELFQELLGALRPVADKHQVNIANVAVRYVLDRPAVAGAIVGVRLGVSENRA--DSARVFEFNLDPSDLAQID 317
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A3C0JQY7_9CHLR (Aldo/keto reductase (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3C0JQY7_9CHLR) HSP 1 Score: 136 bits (342), Expect = 2.570e-35 Identity = 79/235 (33.62%), Postives = 130/235 (55.32%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P+ P +T + E A+D SL RM D +DLLQ W D+++ ++ DAL L L+ GK+RH+ + +F+ LK G+G ++ SN ++ S+++ P ++ C Q + L+A L GGLLSD +L + A+LS A + + + GG W+ FQ LL+ + V+ K+ ++A VA+R V+D PA+ A++G L + + D K +LD+ LD +D
Sbjct: 10 WVPS---PGPMTRGVVEQAMDVSLRRMATDCLDLLQFHWWDYKDESYLDALSHLSNLRDEGKIRHVALTNFDTERLKRITGHGIKIVSNQVQFSLVDRRPEVDMVKFCLDQGIHLLAYGTLCGGLLSDNYLGTPEPSRANLSTASLSKYKQMVDAWGG----WELFQELLQALKIVAVKHEVSVANVAVRYVIDRPAVAGAIVGVRLGASEHRA--DTAKVFSFNLDQQDLDQID 235
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: UPI0016823A4B (aldo/keto reductase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016823A4B) HSP 1 Score: 138 bits (347), Expect = 3.170e-35 Identity = 75/235 (31.91%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P RP +T RL ED ++ SL RMG + +DL+Q W ++++ + DAL + ELQ GK++H+ + +F+ LK + +G ++ SN ++ S+++ P + CE +++L A L GGLLS+++L K + L+ A +R + ++ GG W FQ LL ++++ K+ +I+ VA+R +LD PA+G A+ G+ L + +D K + LD + D ++
Sbjct: 92 WVP---RPNKMTRRLVEDNINISLKRMGVESLDLMQFHWWEYQDTNYLDALKYMSELQAEGKIKHLALTNFDTEHLKIIVDSGIKIVSNQVQFSLVDRRPLVNMAKFCEEHDIKLFAYGTLCGGLLSEKYLGKPEPRGGELATASLRKYKNMVDAWGG----WSLFQELLNALKQIASKHGVSISNVAVRYILDRPAVGGAIAGARLGVSEHI--EDNAKVFNLVLDAEDYDQIN 317
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A075MPU2_9ARCH (Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=2 Tax=Nitrososphaera TaxID=497726 RepID=A0A075MPU2_9ARCH) HSP 1 Score: 137 bits (345), Expect = 7.510e-35 Identity = 79/232 (34.05%), Postives = 131/232 (56.47%), Query Frame = 1
Query: 40 PRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATA 732
P +T + E A++ S RMG + IDL+Q W D+ NPA+ DAL L EL+ AGK+R++G+ +F+ +++ G ++ SN ++ S+I+ P + + C+ NV + A + GGLLS+++L KS+ +A L +R + + GG W FQ LL ++V+ KY+A+IA V R +LD PA+ +IG+ L QD + E+ LD + + ++ TA
Sbjct: 105 PARMTKAVVEQAIERSRRRMGVESIDLVQFHWWDYANPAWLDALVHLSELRDAGKIRNVGLTNFDTDHMQDMADAGIRIASNQVQYSIIDQRPQVKMQEFCKKNNVVIFAYGTMCGGLLSEKYLGKSEPSSAQLDTLSLRKYKKMIDAWGG----WKLFQELLTALKQVATKYNASIANVTARYILDRPAVAGVIIGARLGIAEHR--QDNARVFELRLDEEDREKIEAVTA 330
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A6H1TW31_9CYAN (Aldo/keto reductase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TW31_9CYAN) HSP 1 Score: 137 bits (344), Expect = 8.910e-35 Identity = 79/236 (33.47%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQ-WAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
W P RP +T + E +D S RMG + +DLLQ W D+ + A+ DAL L ELQ GK++H+ + +F+ LKE G + SN ++ S+++ P + +++LC+ + + L+A L GGLLS+R+L + + L+ A + + + W G W FQ+LL+ +E+++K+ IA VA+R VLD PA+ A++G+ L + +D K LD + D +D
Sbjct: 92 WVP---RPTAMTREIVEKNIDISRRRMGVEALDLLQFHWWDYRHRAYLDALDYLAELQAEGKIKHLALTNFDTEHLKELSDRGVNIVSNQVQFSIVDRRPERQMVELCQERGIHLLAYGTLCGGLLSERYLGEGEPRWGRLNTASLGKYKQMVDVW-----GNWSLFQQLLQVLKEIADKHGVKIANVAVRYVLDKPAVAGAIVGARLGVSEHI--EDNAKTFGFDLDGEDRDRID 317 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=797bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCATTTGCGAGTACGTGGGCGCCAAATGCTCAACGGCCAAGGGACATback to top protein sequence of jgi.p|Trimin1|347859 >Trimin1|347859|estExt_Genemark1.C_Ctg_160125 ID=Trimin1|347859|estExt_Genemark1.C_Ctg_160125|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENback to top mRNA from alignment at Contig_16:1114555..1117915- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3361bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_16:1114555..1117915- >mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=744bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )back to top |