mRNA_3045 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347859
Unique NamemRNA_3045
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A835ZBZ1_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ1_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 7.690e-172
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
Query:    1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK 741
            MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK
Sbjct:    1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK 247          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A814Y464_ADIRI (Hypothetical protein n=5 Tax=Adineta ricciae TaxID=249248 RepID=A0A814Y464_ADIRI)

HSP 1 Score: 144 bits (364), Expect = 9.240e-38
Identity = 80/236 (33.90%), Postives = 136/236 (57.63%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPS-ITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P+   P  +T  + E +++ SL +MG + +DLLQ  W D+ N ++ DAL  L ELQ  GK++H+G+ +F+   LK+    G  + SN ++ S+I+  P   ++  C+  N++L+    + GGLLSD++L +S+  +A L  A ++ + + I +W G     W  FQ LL   R + +KY+ +IA VAIR +LD PA+G  ++G  L ++     QD  K  +  LD D ++ ++
Sbjct:   89 WVPH---PTAMTKTVVEQSINKSLTKMGMNSLDLLQFHWWDYGNNSYLDALRYLSELQSEGKIKHLGLTNFDTKRLKQIYEAGITIVSNQVQYSIIDRRPEVSMVPFCQQNNIKLLTYGTVCGGLLSDKYLNQSEPRSADLITASLKKYKNMIDRWGG-----WQLFQELLTALRRIGDKYNVSIANVAIRYILDKPAVGGVIVGVRLGKSEHL--QDTAKVSQFILDTDDVEQIE 314          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: UPI00199E456F (Aldo/keto reductase n=1 Tax=Chloroflexales bacterium TaxID=2725990 RepID=UPI00199E456F)

HSP 1 Score: 141 bits (356), Expect = 1.550e-36
Identity = 78/217 (35.94%), Postives = 127/217 (58.53%), Query Frame = 1
Query:    1 MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETS 648
            M   + W P   RP  +   L E A++ SL RMG + +DLLQ  W D+ NPA+ DAL  L  L+ AGK+RH+ + +F+   L+    +G +V SN ++ S+++L P+Q +   C+   V L+A   L GGLL++R+L + +   A L+ A +R +  +    GG    WD FQ LL     ++ ++ ATIA+VA+R +LD PA+   ++G+ L +++
Sbjct:   86 MQAFTKWVP---RPGPMPRPLVEAAINQSLRRMGVETLDLLQFHWWDYSNPAYLDALGHLAALRDAGKIRHLALTNFDTQRLEIIAQHGIRVVSNQVQFSLVDLRPTQRMAAFCQQHGVALLAYGTLCGGLLTERFLGRPEPTRAELNTASLRKYKQMVDLWGG----WDLFQELLSALNGIAARHGATIASVAVRAILDQPAVAGVIVGARLGQSA 295          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A816AK58_9BILA (Hypothetical protein n=8 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A816AK58_9BILA)

HSP 1 Score: 139 bits (351), Expect = 8.040e-36
Identity = 78/235 (33.19%), Postives = 133/235 (56.60%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P   +P  IT +L E+ ++ SL RMG + IDLLQ  W D+ + ++ DAL  L ELQ+ GK++H+G+ +F+   LK     G ++ SN ++ S+I+  P   ++  C+  N++L+    + GG LS+++L K +     L+   ++ + ++    GG    W  FQ LL   ++++ K+S +IA VA+R +LD P +G  +IG+ L  +     QD  K  E +LD D  + +D
Sbjct:   92 WVP---QPTKITKKLVEENINKSLTRMGVESIDLLQFHWWDYRDNSYLDALRYLSELQKEGKIKHLGLTNFDTERLKIIHEAGIKIVSNQVQYSIIDRRPEVHMIPFCQQNNIKLLTYGTVCGGFLSEKYLGKPEPRAGDLTTISLKKYKNMVDKWGG----WQLFQELLTVLKQIANKHSVSIANVAVRYILDKPTVGGVIIGARLGLSEHL--QDNAKVFEFNLDADDNEKID 317          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A813SWT9_9BILA (Hypothetical protein n=8 Tax=Adineta steineri TaxID=433720 RepID=A0A813SWT9_9BILA)

HSP 1 Score: 139 bits (350), Expect = 1.130e-35
Identity = 80/236 (33.90%), Postives = 133/236 (56.36%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPS-ITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P   +P  +T +L E+ ++ SL RM  + IDLLQ  W D+ N ++ DAL  L ELQ+ GK++H+G+ +F+   LK     G ++ SN ++ S+I+  P   ++  C+  N++L+    + GGLLS+++L K +     L+ + ++ + + I  W G     W  FQ LL   +++  KY+ +IA VAIR +LD P +G  +IG+ L  +     QD  K  E SLD D  + ++
Sbjct:   92 WVP---QPTQMTKKLVEENINKSLRRMQVESIDLLQFHWWDYGNNSYLDALRYLSELQKEGKIKHLGLTNFDTQRLKIIHEAGIKIVSNQVQFSIIDRRPEVHMIPFCQQHNIKLLTYGTVCGGLLSEKYLGKPEPRKEELNTSSLKKYKNMIDNWGG-----WQLFQELLNVLKQIGNKYNVSIANVAIRYILDKPTVGGVIIGARLGISEHI--QDNAKVYEFSLDTDDTEKIE 317          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A2E2DVQ2_9CHLR (Aldo/keto reductase n=4 Tax=Chloroflexi TaxID=200795 RepID=A0A2E2DVQ2_9CHLR)

HSP 1 Score: 139 bits (350), Expect = 1.150e-35
Identity = 82/235 (34.89%), Postives = 130/235 (55.32%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P   RP  +T  + E AVD SL RM  D +DLLQ  W ++++ ++ DAL  L +L+  GK+RH+ + +F+   LK   G+G ++ SN ++ S+I+  P   +   C  Q + L+A   L GGLLSDR+L   +   ++L+ A +  +  +    GG    W+ FQ LL   R V++K+   IA VA+R VLD PA+  A++G  L  + + +  D  +  E +LD   L  +D
Sbjct:   92 WVP---RPGPMTRGVVEQAVDVSLRRMDTDRLDLLQFHWWEYQDESYLDALSHLSDLRDEGKIRHVALTNFDTERLKRIAGHGIKIVSNQVQFSLIDRRPEVEMAQFCLDQGIHLLAYGTLCGGLLSDRYLRTPEPSRSALNTASLSKYKQMVDAWGG----WELFQELLGALRPVADKHQVNIANVAVRYVLDRPAVAGAIVGVRLGVSENRA--DSARVFEFNLDPSDLAQID 317          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A3C0JQY7_9CHLR (Aldo/keto reductase (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3C0JQY7_9CHLR)

HSP 1 Score: 136 bits (342), Expect = 2.570e-35
Identity = 79/235 (33.62%), Postives = 130/235 (55.32%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P+   P  +T  + E A+D SL RM  D +DLLQ  W D+++ ++ DAL  L  L+  GK+RH+ + +F+   LK   G+G ++ SN ++ S+++  P   ++  C  Q + L+A   L GGLLSD +L   +   A+LS A +  +  +    GG    W+ FQ LL+  + V+ K+  ++A VA+R V+D PA+  A++G  L  +   +  D  K    +LD+  LD +D
Sbjct:   10 WVPS---PGPMTRGVVEQAMDVSLRRMATDCLDLLQFHWWDYKDESYLDALSHLSNLRDEGKIRHVALTNFDTERLKRITGHGIKIVSNQVQFSLVDRRPEVDMVKFCLDQGIHLLAYGTLCGGLLSDNYLGTPEPSRANLSTASLSKYKQMVDAWGG----WELFQELLQALKIVAVKHEVSVANVAVRYVIDRPAVAGAIVGVRLGASEHRA--DTAKVFSFNLDQQDLDQID 235          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: UPI0016823A4B (aldo/keto reductase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016823A4B)

HSP 1 Score: 138 bits (347), Expect = 3.170e-35
Identity = 75/235 (31.91%), Postives = 133/235 (56.60%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P   RP  +T RL ED ++ SL RMG + +DL+Q  W ++++  + DAL  + ELQ  GK++H+ + +F+   LK  + +G ++ SN ++ S+++  P   +   CE  +++L A   L GGLLS+++L K +     L+ A +R + ++    GG    W  FQ LL   ++++ K+  +I+ VA+R +LD PA+G A+ G+ L  +     +D  K   + LD +  D ++
Sbjct:   92 WVP---RPNKMTRRLVEDNINISLKRMGVESLDLMQFHWWEYQDTNYLDALKYMSELQAEGKIKHLALTNFDTEHLKIIVDSGIKIVSNQVQFSLVDRRPLVNMAKFCEEHDIKLFAYGTLCGGLLSEKYLGKPEPRGGELATASLRKYKNMVDAWGG----WSLFQELLNALKQIASKHGVSISNVAVRYILDRPAVGGAIAGARLGVSEHI--EDNAKVFNLVLDAEDYDQIN 317          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A075MPU2_9ARCH (Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=2 Tax=Nitrososphaera TaxID=497726 RepID=A0A075MPU2_9ARCH)

HSP 1 Score: 137 bits (345), Expect = 7.510e-35
Identity = 79/232 (34.05%), Postives = 131/232 (56.47%), Query Frame = 1
Query:   40 PRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATA 732
            P  +T  + E A++ S  RMG + IDL+Q  W D+ NPA+ DAL  L EL+ AGK+R++G+ +F+   +++    G ++ SN ++ S+I+  P   + + C+  NV + A   + GGLLS+++L KS+  +A L    +R +  +    GG    W  FQ LL   ++V+ KY+A+IA V  R +LD PA+   +IG+ L        QD  +  E+ LD +  + ++  TA
Sbjct:  105 PARMTKAVVEQAIERSRRRMGVESIDLVQFHWWDYANPAWLDALVHLSELRDAGKIRNVGLTNFDTDHMQDMADAGIRIASNQVQYSIIDQRPQVKMQEFCKKNNVVIFAYGTMCGGLLSEKYLGKSEPSSAQLDTLSLRKYKKMIDAWGG----WKLFQELLTALKQVATKYNASIANVTARYILDRPAVAGVIIGARLGIAEHR--QDNARVFELRLDEEDREKIEAVTA 330          
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Match: A0A6H1TW31_9CYAN (Aldo/keto reductase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TW31_9CYAN)

HSP 1 Score: 137 bits (344), Expect = 8.910e-35
Identity = 79/236 (33.47%), Postives = 131/236 (55.51%), Query Frame = 1
Query:   19 WAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFENPAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCSMINL-PSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAEVRHFPSITQ-WAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDSPAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLD 720
            W P   RP  +T  + E  +D S  RMG + +DLLQ  W D+ + A+ DAL  L ELQ  GK++H+ + +F+   LKE    G  + SN ++ S+++  P + +++LC+ + + L+A   L GGLLS+R+L + +     L+ A +  +  +   W     G W  FQ+LL+  +E+++K+   IA VA+R VLD PA+  A++G+ L  +     +D  K     LD +  D +D
Sbjct:   92 WVP---RPTAMTREIVEKNIDISRRRMGVEALDLLQFHWWDYRHRAYLDALDYLAELQAEGKIKHLALTNFDTEHLKELSDRGVNIVSNQVQFSIVDRRPERQMVELCQERGIHLLAYGTLCGGLLSERYLGEGEPRWGRLNTASLGKYKQMVDVW-----GNWSLFQQLLQVLKEIADKHGVKIANVAVRYVLDKPAVAGAIVGARLGVSEHI--EDNAKTFGFDLDGEDRDRID 317          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347859 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBZ1_9STRA7.690e-172100.00NADP-dependent oxidoreductase domain-containing pr... [more]
A0A814Y464_ADIRI9.240e-3833.90Hypothetical protein n=5 Tax=Adineta ricciae TaxID... [more]
UPI00199E456F1.550e-3635.94Aldo/keto reductase n=1 Tax=Chloroflexales bacteri... [more]
A0A816AK58_9BILA8.040e-3633.19Hypothetical protein n=8 Tax=unclassified Rotaria ... [more]
A0A813SWT9_9BILA1.130e-3533.90Hypothetical protein n=8 Tax=Adineta steineri TaxI... [more]
A0A2E2DVQ2_9CHLR1.150e-3534.89Aldo/keto reductase n=4 Tax=Chloroflexi TaxID=2007... [more]
A0A3C0JQY7_9CHLR2.570e-3533.62Aldo/keto reductase (Fragment) n=1 Tax=Dehalococco... [more]
UPI0016823A4B3.170e-3531.91aldo/keto reductase n=1 Tax=Microcoleus sp. FACHB-... [more]
A0A075MPU2_9ARCH7.510e-3534.05Putative oxidoreductase, aryl-alcohol dehydrogenas... [more]
A0A6H1TW31_9CYAN8.910e-3533.47Aldo/keto reductase n=3 Tax=Cyanobacteria TaxID=11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1114555..1117915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347859|estExt_Genemark1.C_Ctg_160125
DescriptionPFAM Aldo keto reductase family
COG categoryC
Max annot lvl1117|Cyanobacteria
EggNOG OGsCOG0667@1|root,COG0667@2|Bacteria,1G1XK@1117|Cyanobacteria,3VIJJ@52604|Pleurocapsales
Evalue8.68e-36
Seed ortholog118163.Ple7327_3678
Hectar predicted targeting categoryother localisation
TranscriptId348181
TrackFilteredModels1
ProteinId347859
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347859gene_3045Tribonema minus UTEX_B_3156 geneContig_16 1114555..1117915 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347859Trimin1|347859|estExt_Genemark1.C_Ctg_160125Tribonema minus UTEX_B_3156 polypeptideContig_16 1114608..1117915 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3045_4exon_3045_4Tribonema minus UTEX_B_3156 exonContig_16 1114555..1114787 -
exon_3045_3exon_3045_3Tribonema minus UTEX_B_3156 exonContig_16 1115644..1115934 -
exon_3045_2exon_3045_2Tribonema minus UTEX_B_3156 exonContig_16 1116550..1116688 -
exon_3045_1exon_3045_1Tribonema minus UTEX_B_3156 exonContig_16 1117782..1117915 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3045UTR3_3045Tribonema minus UTEX_B_3156 three_prime_UTRContig_16 1114555..1114607 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3045CDS_3045Tribonema minus UTEX_B_3156 CDSContig_16 1117782..1117915 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=797bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCATTTGCGAGTACGTGGGCGCCAAATGCTCAACGGCCAAGGGACAT
CACGTTCCGCCTCACGGAGGACGCTGTGGATGCATCACTACTCAGGATGG
GCGCCGATGAAATCGACCTCCTGCAGCTCAGCTGGAACGACTTTGAGAAC
CCCGCCTTCAATGACGCCTTGTACCAGCTGTGCGAACTACAGCGAGCCGG
CAAAGTGCGTCACATCGGTGTCATCGACTTCGAGGAAGCACCTCTCAAAG
AGGCAATCGGCAATGGGTTTCAGGTCACCAGCAATAACATGAAGTGCAGC
ATGATCAACCTGCCGAGCCAGGGCCTCCTGGACCTGTGCGAGGCCCAAAA
TGTGCAGCTCATTGCCAGGGCGGTTCTGTTAGGGGGCCTGCTAAGCGACA
GGTGGCTACTCAAGAGCGACAAGATGACAGCGAGCCTCAGCGCAGCGGAG
GTGCGGCATTTTCCATCCATCACGCAGTGGGCGGGCGGCACACGAGGGCG
CTGGGACCAGTTCCAGCGGCTGTTGAAGAACACGCGAGAGGTGTCCGAGA
AGTACAGCGCAACGATCGCTACAGTCGCCATCCGGCGCGTGTTGGACAGT
CCTGCCATCGGTGCTGCGGTGATTGGCTCCAGCCTGGAGGAGACATCGGA
CTATTCACCACAGGACTTGGTCAAAGCACTAGAGATGTCTCTAGACAGGG
ATGCACTAGATTACCTGGACCGGGCTACGGCGCCGAGAAAATGACACTCG
CAGCTGCCTCTTTCGATGTTAACATGGCATGCTAAAGCCACTTGCCT
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protein sequence of jgi.p|Trimin1|347859

>Trimin1|347859|estExt_Genemark1.C_Ctg_160125 ID=Trimin1|347859|estExt_Genemark1.C_Ctg_160125|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp
MSFASTWAPNAQRPRDITFRLTEDAVDASLLRMGADEIDLLQLSWNDFEN
PAFNDALYQLCELQRAGKVRHIGVIDFEEAPLKEAIGNGFQVTSNNMKCS
MINLPSQGLLDLCEAQNVQLIARAVLLGGLLSDRWLLKSDKMTASLSAAE
VRHFPSITQWAGGTRGRWDQFQRLLKNTREVSEKYSATIATVAIRRVLDS
PAIGAAVIGSSLEETSDYSPQDLVKALEMSLDRDALDYLDRATAPRK*
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mRNA from alignment at Contig_16:1114555..1117915-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3361bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )
ATGTCATTTGCGAGTACGTGGGCGCCAAATGCTCAACGGCCAAGGGACAT CACGTTCCGCCTCACGGAGGACGCTGTGGATGCATCACTACTCAGGATGG GCGCCGATGAAATCGACCTCCTGCAGCTCAGCTGGTGAGCATGGCAAGTG GGAGCTGATGTTACTTCATTGAGAGTGTTCAACATTATGGAATGGCATTG CAAGAAATTGGCGCAGCAGTGCAACTTTCATGAAATGATATGGGTTGTAC TCAGCAATTGTGCTGCCACCTGGAATGATAGCAAGGTGGTCATGCCACTT GGGCAGCGTTCACCAAGATCCTTAAATTACAATCACCCTCATGGGCTGTA AACATTATAGTATGTGACCAGTTGCGCTTAGAAGTGCGTCTTGGGCAAAT AGCTATCTGTCATAATGGCATATGTCAGCAGGGTCATTGACGCTTTGCTT AATGAATGCTGTCAGCAGTCGCGCATTGCACACATACATAGCTAGACACC CTCTTGTGTAGGTTGCAAGTGCTTTGCCTCTGTGCGCAACGTCGCCATTC ATAAGCCATTGTTTTATCGTGGAGAGTCTCATAGAAGAGGTCATCTCGTC ATGTGTGTTGCATGCAGGCGATGCGCACAACCGTGTCTGGCCAGGAAGTT CATCAAATTGGTCATGATCATGCGCCATCAATCATCCCTTGTAGATATGA ATCAAATGATGCTCATCTTGGCTAGCTGTATTGCACCGATGAGCGTCTCC CTCGCCTAGTCGGTCATGTCAACGCTGTTCAGGCTTTTGCTCTGTCGCAA TGCGACTGTACGTTGACAGCCGCTTTGTATGCAATCAGCCTCAAACAGTG AATGAGTGAACCACAAGTTGACCCTTCTGTGCATTCGTTGTGACGCCCAC CATCTTGCTGAGACTCATATTGGCTGCCTCTGTGATCCTTGCATGCTACG TAATTGCACATGGGAACAACCATCCAGCATACCTTCACTCATTCAAGCGC TTCATTTCTGCAGCCCTGCTTGGTCCCTCCCCTGGTTCAAGTGTCTGCCT GATGCTCATTTCCTTAATCTGGTGGGTTCAGCCCCCCCTCCTGTGTACAT GCTATTAATGCGTACACATTTGTCAGTATGCAGCACAACCCAAAGCCACA ATAGCAGTGTAATACTATGCACGTGATGCGCACAAAGGATGCTGTAACAT GCACAAAACTTGCACGCTTGTGAACAGGAACGACTTTGAGAACCCCGCCT TCAATGACGCCTTGTACCAGCTGTGCGAACTACAGCGAGCCGGCAAAGTG CGTCACATCGGTGTCATCGACTTCGAGGAAGCACCTCTCAAAGAGGCAAT CGGCAATGGGTTTCAGGTGAGCATGGAACAGCCCAGGTGGATGTGCACAC GTTGCACGCGGGTAGTTTTGTTGGCACCACCTTGTGCAAGGCTCTTGAAC CAGACCAGCACTGGATTACATAAAGAGCCCATTGATGGCCCTTGCTTCAG CGGCGGGTTTGTGACTCAGAGCAAGAGGTGATCTGCTTGAGAGTTTGCAG AGGTGTTCAAGTCCTTTGCCACTGCAGGTTGCCGAGATCACGACTACATT ACATGTGCAAAGGGTGTCACCTAGGCATGTTCACATCGTTTTTGTGGTAC ACCACCATGTTGCATGCAAAATGATCGTCGTCACTTCTGGGCTCATAATG TTCAAGCGCCTACAACAATGCAGGCCGAGCTCTGCGCTTTTTCGGTTTGA AGTATGCATTTGCAGTGATTTCTAAATACAAGAGAGACGCAGGAGCACCC CACTCAAACCTTTGCAATCTAGCCTGCCAGTTATGCGCAAGTGCAATATG GCGGCATATGCTGCTGTTTGCCTACTTGAAGTACAATGTGTGGAATCCAC GCAGGTGTACACATGACTTGTAAATAAATGTTCGCATCTCAAGACATAAG CTGGTTCTGCGCGGACTCTGTATGCATGCAGGTCACCAGCAATAACATGA AGTGCAGCATGATCAACCTGCCGAGCCAGGGCCTCCTGGACCTGTGCGAG GCCCAAAATGTGCAGCTCATTGCCAGGGCGGTTCTGTTAGGGGGCCTGCT AAGCGACAGGTGGCTACTCAAGAGCGACAAGATGACAGCGAGCCTCAGCG CAGCGGAGGTGCGGCATTTTCCATCCATCACGCAGTGGGCGGGCGGCACA CGAGGGCGCTGGGACCAGTTCCAGCGGCTGTTGAAGAACACGCGAGAGGT GTCCGAGAAGTACAGCGCAACGGTGAGTTGCAGCGTCTGGGAAACTCGCA GTCTGCCCCTGCTCTGAATCTTGGGTACTGTGTAGCGCAGAAATGGTGTG TACGCTTTGCTGTATACGCTTCGCTTCTGCATCAACTGTCCCCAGATCAG GCGTGTAGCACATTGATTCTGACGGCGTTGTCAATGCGTGCCGCTCGGCA TCACTACATAGCTGTTGTTACAAGAACATAGAGTCAACTCCGACAAGCGT TGTCAACGCTATGTCATTTTTGTTAAGAAGCTTGACAAATGGTTTTGGTA CGCATGTACATAGCAAACTGCAGCATAACGCTCAACTGTGGCTCTGCAGA TCTGCAGTGAATTTTGTTGTCCAGAAGTGTCACACTATAGTCGCTGTTTT GTCGCTTGTAAGTGGAATGCGAGTTGTGTGCTGTCATTGGCGATGGATGC TCTAAGCACGTAGGAACTATATGTGCTCTCAGTGCATTCACCTCACTGCA ACCCACAACTTAATGTTGTCACGCTCTGTGCTGCATTCCAACATGGCCGT TGTTTAAACACGCAACAGGAAGTTACGCTCAACCATAACTTTGAAGTCAC GACTGGAACCGCTGCAGTACTCGAGGGCCACAGCGGTGCATGCATTGCAA GTGTCTGCCTTGTGATCTGATGCATCTTGTCTCATGTGTGATTCGCCATA TATGCCGCTGAAGTGATGCCATGTGGTGCTCTGACGTGTAGTGTCATCCC ACATGACTGACTGCAAAGGTTGCTTTGAGGTATTACATATTCAACGGACA CGCTTTCAGCAATACTTTGGCACTACAATTCTGCTCTAACTGACATGTTC TTGCGTTATTGTGTTGGTGCTTTTGCAGATCGCTACAGTCGCCATCCGGC GCGTGTTGGACAGTCCTGCCATCGGTGCTGCGGTGATTGGCTCCAGCCTG GAGGAGACATCGGACTATTCACCACAGGACTTGGTCAAAGCACTAGAGAT GTCTCTAGACAGGGATGCACTAGATTACCTGGACCGGGCTACGGCGCCGA GAAAATGACACTCGCAGCTGCCTCTTTCGATGTTAACATGGCATGCTAAA GCCACTTGCCT
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Coding sequence (CDS) from alignment at Contig_16:1114555..1117915-

>mRNA_3045 ID=mRNA_3045|Name=jgi.p|Trimin1|347859|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=744bp|location=Sequence derived from alignment at Contig_16:1114555..1117915- (Tribonema minus UTEX_B_3156 )
ATGTCATTTGCGAGTACGTGGGCGCCAAATGCTCAACGGCCAAGGGACAT
CACGTTCCGCCTCACGGAGGACGCTGTGGATGCATCACTACTCAGGATGG
GCGCCGATGAAATCGACCTCCTGCAGCTCAGCTGGAACGACTTTGAGAAC
CCCGCCTTCAATGACGCCTTGTACCAGCTGTGCGAACTACAGCGAGCCGG
CAAAGTGCGTCACATCGGTGTCATCGACTTCGAGGAAGCACCTCTCAAAG
AGGCAATCGGCAATGGGTTTCAGGTCACCAGCAATAACATGAAGTGCAGC
ATGATCAACCTGCCGAGCCAGGGCCTCCTGGACCTGTGCGAGGCCCAAAA
TGTGCAGCTCATTGCCAGGGCGGTTCTGTTAGGGGGCCTGCTAAGCGACA
GGTGGCTACTCAAGAGCGACAAGATGACAGCGAGCCTCAGCGCAGCGGAG
GTGCGGCATTTTCCATCCATCACGCAGTGGGCGGGCGGCACACGAGGGCG
CTGGGACCAGTTCCAGCGGCTGTTGAAGAACACGCGAGAGGTGTCCGAGA
AGTACAGCGCAACGATCGCTACAGTCGCCATCCGGCGCGTGTTGGACAGT
CCTGCCATCGGTGCTGCGGTGATTGGCTCCAGCCTGGAGGAGACATCGGA
CTATTCACCACAGGACTTGGTCAAAGCACTAGAGATGTCTCTAGACAGGG
ATGCACTAGATTACCTGGACCGGGCTACGGCGCCGAGAAAATGA
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