mRNA_2986 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347825
Unique Name	mRNA_2986
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A836CK92_9STRA (HMG box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK92_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 5.840e-178
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1

Query:    1 MLDDLEALEDSQQHSQLSSGTKRKLDDYQSVNAETPADEHEETGQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPASDAEGEEXEADADGGDPHETGDDPAADXXXXXXAGTDGXXXXXXXXXXXXXXSAAASEPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALAAGPGSKSITSFFART 1050
            MLDDLEALEDSQQHSQLSSGTKRKLDDYQSVNAETPADEHEETGQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPASDAEGEEXEADADGGDPHETGDDPAADXXXXXXAGTDGXXXXXXXXXXXXXXSAAASEPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALAAGPGSKSITSFFART
Sbjct:    1 MLDDLEALEDSQQHSQLSSGTKRKLDDYQSVNAETPADEHEETGQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPASDAEGEEXEADADGGDPHETGDDPAADXXXXXXAGTDGXXXXXXXXXXXXXXSAAASEPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALAAGPGSKSITSFFART 350

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A6U3YH94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YH94_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.400e-22
Identity = 64/183 (34.97%), Postives = 106/183 (57.92%), Query Frame = 1

Query:  400 AASEPA-KKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQA---AGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREEL 936
            AA++P  + IK+A++A+  F  +KR EV  ANPGA IG + K    +WA +  EE++VY+A+AAE++ R+ +E++A   AGL     AG   G E      A++++++P+ ++RK AK+D +V+ I  +    +AK  ELF   L   +   A+   RR L   D+A+         FL+E++
Sbjct:  104 AATKPILRPIKKARTAYFIFAGEKRAEVQAANPGAAIGTLAKAIGQLWANLSAEEREVYQARAAEERERVSKEMEALREAGLLPNQLAGADGGGEGSN--SASSSLVIPVHKIRKIAKLDPDVRKITPEATVLLAKCAELFTCKLGVETAKVAQMQNRRKLLPEDVAEVCSTRDECLFLKEDV 284

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A7S0C498_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C498_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.720e-18
Identity = 64/222 (28.83%), Postives = 111/222 (50.00%), Query Frame = 1

Query:  418 KKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQREL---QAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXX--------ALAAGPGSKSITSFFART 1050
            K IK+A++ +  F  DKR E+ +A+PG  +    +    +WAA+ PEEK+ Y+ ++A ++  + R++   + AGL +   +  +  E   L       + LPLSR++K A++D+EVK ++ + L  IA++ ELF   L   +   A+   RR +   DI+         +FLRE+L  +                         ++ A  GSK +TS+F+RT
Sbjct:   90 KPIKKARTGYFIFTDDKRAEIQEAHPGEGVAFQARALGKLWAAITPEEKESYQRRSALERENVTRQILERKEAGLLEDNVSNEQKNEVGGL------QLTLPLSRIKKIARLDSEVKGMSREALLLIARSAELFTTKLGLETVRVAQMQNRRKILPEDISDACTTREEFFFLREDLRDLLNDQQLEKKKNAATSTSLTSKSNAKSVKASEGSKPLTSYFSRT 305

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A448Z0U5_9STRA (HMG box domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0U5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.050e-16
Identity = 62/220 (28.18%), Postives = 101/220 (45.91%), Query Frame = 1

Query:  400 AASEPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALA------AGPGSKSITSFF 1041
            AA    + +KRA++A+  F  ++R  + K +PG  +    K     W ++P  EK  + A AA +K R+        L  LP        +   P D+   ++ P++R+R+ AK+D EVK+++ + L  +A+A EL +A L       AR   RR L   D+A       A +FLRE++  +A                  A      A  G+K +TS+F
Sbjct:  124 AAPVAVRPLKRARTAYFIFADEQRPSIQKEHPGETVAVQAKRIGARWKSLPDAEKDRFRALAAAEKERV--------LASLPEGAPGPVGDAGSPSDS---LVFPVARIRRIAKLDPEVKTLSREALQLVARAAELALARLGTECVRVARMQNRRTLLPDDVADVCTHREAFHFLREDIRDLAAAQQKGSGKAEAAAAAGRAEKAKREAAAGTKPLTSYF 332

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A7S3JX96_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX96_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.120e-14
Identity = 58/176 (32.95%), Postives = 94/176 (53.41%), Query Frame = 1

Query:  409 EPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQA-AGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREE 933
            EP   +K+  SA++ F A+ R  V    P A  G V K  S  W ++   EK+ +   A  D+ R +RE +       L S+ N  G  + L P  T   ++P+SRV+K AK+D +++S++ +  A I K TELF+A LA  +  A+  SG+R ++ +D+A C+       +LR +
Sbjct:   90 EPKGPLKKPVSAFLHFCAENRAVVKDRLPNASAGEVTKTISESWRSLNEAEKKRFMDIAIADRERYEREKKKYPAAAALSSSTNSKGNTKGLEPHET---VIPISRVKKIAKLDPQLRSLSKEANALITKMTELFVAKLATETHSAS--SGKRIIKASDVAHCIHNRPQFAWLRPD 260

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A7S2FZW8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZW8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.300e-12
Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 1

Query:  418 KKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREE 933
            KK+KR Q A+  F    R+ V    PG  +    K  +  W ++   EK  +  + A++    QRE+       +  A +  G++      +   +++P+ RVR+T K+D +VK+I  +  A +AKATE F+A +A+ S+  +  SGRR L+  DI  CV+      +LR++
Sbjct:    3 KKLKRNQEAFTSFCHSYRETV----PGLSVLDQSKALADRWRSLSEAEKDSFMPKVADENQGHQREIIDQSTLPVEPAKSSKGKKDS----SAFEMVIPVGRVRRTCKLDPDVKNITKEATALVAKATERFLAQIAEESFKISSLSGRRTLKTDDIRDCVNRLPQYEWLRDD 166

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A1E7FIV6_9STRA (HMG box domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FIV6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.490e-8
Identity = 47/177 (26.55%), Postives = 89/177 (50.28%), Query Frame = 1

Query:  418 KKIKRAQSAWMFFLADKRDEVVKANPGAR-IGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPS-AGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGA--LYFLREEL 936
            + +KR+++A+  F    R  + K  P  + +  + K     W  +  EEK+ ++  A+++K   + +L+A           N +     L  D   +++ P++R+ K AK+D ++ +I+ +G+  I K+TELF++ L   S   A QS RR +  TDI Q   +       FL+E++
Sbjct:  118 RPMKRSRTAYFIFADHMRPSIRKEFPDEKGVATMAKRIGHKWKEISIEEKEKFQLIASKEKEIYKEQLEAYKKQMGDDYVENINQSSSSLSSDHPNSLIFPIARISKIAKLDPDINAISKEGINLIVKSTELFLSKLGTDSMKVASQSNRRTIYSTDIKQICSSGQKQEFLFLKEDI 294

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A166GYV5_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166GYV5_9AGAM)

HSP 1 Score: 58.9 bits (141), Expect = 5.140e-7
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1

Query:  427 KRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERD 678
            KR  SA+MFF  D R++V K +P A  G + K   G W  M  ++K+ Y  QAAEDKAR +RE +     K  S      E+ D
Sbjct:   63 KRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDEDDKKPYAKQAAEDKARYEREKEEYEAGKAASGSGEEAEDDD 146

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A5E3X9L3_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3X9L3_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 6.790e-7
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1

Query:  427 KRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERD 678
            KR  SA+MFF  D R++V K +P A  G + K   G W  M  ++K+ Y  QAAEDKAR +RE +     K  S      E+ D
Sbjct:   33 KRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDDDDKKPYIKQAAEDKARYEREKEEYESGKAASGSGEEAEDDD 116

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BLAST of jgi.p|Trimin1|347825 vs. uniprot
Match: A0A7R9A069_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A069_9CRUS)

HSP 1 Score: 58.2 bits (139), Expect = 3.000e-6
Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 1

Query:  403 ASEPAKKIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGN 657
            A +PA   KRA SA+ +F AD+R +V   NP   +G V KE    WA   PE K  YEA AA+DK R +RE+ A    K P A +
Sbjct:  109 AKDPAAP-KRALSAFFWFCADERPKVRALNPDYAVGDVAKELGKRWADATPEVKSKYEAMAAKDKGRYEREMTA--YRKKPKANS 190

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347825 vs. uniprot

BLAST of jgi.p|Trimin1|347825 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CK92_9STRA	5.840e-178	100.00	HMG box domain-containing protein n=1 Tax=Tribonem...	[more]
A0A6U3YH94_9STRA	1.400e-22	34.97	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A7S0C498_9STRA	2.720e-18	28.83	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A448Z0U5_9STRA	8.050e-16	28.18	HMG box domain-containing protein n=1 Tax=Pseudo-n...	[more]
A0A7S3JX96_9STRA	1.120e-14	32.95	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2FZW8_9STRA	4.300e-12	30.23	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A1E7FIV6_9STRA	1.490e-8	26.55	HMG box domain-containing protein n=1 Tax=Fragilar...	[more]
A0A166GYV5_9AGAM	5.140e-7	40.48	HMG box domain-containing protein n=1 Tax=Peniopho...	[more]
A0A5E3X9L3_9AGAM	6.790e-7	40.48	HMG box domain-containing protein n=1 Tax=Peniopho...	[more]
A0A7R9A069_9CRUS	3.000e-6	44.71	Hypothetical protein (Fragment) n=1 Tax=Darwinula ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_16	contig	Contig_16:610594..616844 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347825\|estExt_Genemark1.C_Ctg_160076
BRITE	br01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03021,ko03032,ko03036,ko03400,ko04147
KEGG rclass	RC02795
KEGG Reaction	R00375,R00376,R00377,R00378,R00435,R00441,R00442,R00443
KEGG Module	M00182,M00263
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,ko03030,ko03410,ko03420,ko04140,ko04217,ko04612,ko05152,ko05166,ko05168,ko05203,map00230,map00240,map01100,map03020,map03030,map03410,map03420,map04140,map04217,map04612,map05152,map05166,map05168,map05203
KEGG ko	ko:K03004,ko:K03506,ko:K08066,ko:K10802,ko:K11295,ko:K11296,ko:K11297,ko:K11656,ko:K15413
EC	2.7.7.7
GOs	GO:0000003,GO:0000122,GO:0000217,GO:0000228,GO:0000400,GO:0000401,GO:0000402,GO:0000405,GO:0000723,GO:0000737,GO:0000785,GO:0000790,GO:0000793,GO:0000902,GO:0000976,GO:0001067,GO:0001158,GO:0001530,GO:0001654,GO:0001667,GO:0001708,GO:0001773,GO:0001775,GO:0001776,GO:0001780,GO:0001786,GO:0001816,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001934,GO:0001935,GO:0001936,GO:0001938,GO:0002053,GO:0002119,GO:0002164,GO:0002200,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002250,GO:0002252,GO:0002253,GO:0002262,GO:0002263,GO:0002270,GO:0002274,GO:0002275,GO:0002281,GO:0002283,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002312,GO:0002322,GO:0002366,GO:0002376,GO:0002407,GO:0002437,GO:0002443,GO:0002444,GO:0002446,GO:0002460,GO:0002520,GO:0002521,GO:0002562,GO:0002643,GO:0002682,GO:0002683,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002694,GO:0002695,GO:0002696,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002755,GO:0002757,GO:0002758,GO:0002759,GO:0002764,GO:0002790,GO:0002791,GO:0002793,GO:0002819,GO:0002822,GO:0002831,GO:0002832,GO:0002834,GO:0002837,GO:0002840,GO:0002920,GO:0002921,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003682,GO:0003684,GO:0003690,GO:0003697,GO:0003700,GO:0003723,GO:0003725,GO:0003727,GO:0003824,GO:0003887,GO:0005102,GO:0005125,GO:0005178,GO:0005488,GO:0005515,GO:0005539,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0005981,GO:0006109,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006266,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006284,GO:0006308,GO:0006309,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006909,GO:0006915,GO:0006921,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006974,GO:0006996,GO:0006997,GO:0007010,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007204,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007346,GO:0007379,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007548,GO:0007623,GO:0008047,GO:0008097,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008201,GO:0008219,GO:0008283,GO:0008284,GO:0008289,GO:0008301,GO:0008348,GO:0008406,GO:0008584,GO:0008622,GO:0008623,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009306,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010243,GO:0010464,GO:0010468,GO:0010469,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010594,GO:0010595,GO:0010596,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010632,GO:0010633,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010858,GO:0010906,GO:0010907,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014910,GO:0014911,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016055,GO:0016192,GO:0016444,GO:0016477,GO:0016604,GO:0016605,GO:0016740,GO:0016772,GO:0016779,GO:0016829,GO:0017025,GO:0017055,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019725,GO:0019843,GO:0019887,GO:0019899,GO:0019904,GO:0019953,GO:0019955,GO:0019956,GO:0019958,GO:0022008,GO:0022407,GO:0022408,GO:0022409,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030030,GO:0030036,GO:0030097,GO:0030098,GO:0030100,GO:0030141,GO:0030154,GO:0030155,GO:0030162,GO:0030182,GO:0030217,GO:0030234,GO:0030262,GO:0030295,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030336,GO:0030545,GO:0030595,GO:0031010,GO:0031099,GO:0031100,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031333,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031491,GO:0031493,GO:0031497,GO:0031532,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032069,GO:0032070,GO:0032071,GO:0032072,GO:0032075,GO:0032101,GO:0032102,GO:0032103,GO:0032147,GO:0032200,GO:0032268,GO:0032270,GO:0032386,GO:0032387,GO:0032392,GO:0032423,GO:0032425,GO:0032479,GO:0032481,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032508,GO:0032640,GO:0032642,GO:0032647,GO:0032648,GO:0032649,GO:0032651,GO:0032652,GO:0032653,GO:0032655,GO:0032675,GO:0032677,GO:0032680,GO:0032689,GO:0032722,GO:0032727,GO:0032728,GO:0032731,GO:0032732,GO:0032733,GO:0032735,GO:0032755,GO:0032757,GO:0032760,GO:0032868,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032881,GO:0032940,GO:0032943,GO:0032944,GO:0032946,GO:0032989,GO:0032991,GO:0033032,GO:0033034,GO:0033036,GO:0033151,GO:0033157,GO:0033218,GO:0033365,GO:0033554,GO:0033674,GO:0033993,GO:0034061,GO:0034097,GO:0034121,GO:0034123,GO:0034134,GO:0034135,GO:0034137,GO:0034142,GO:0034143,GO:0034145,GO:0034162,GO:0034163,GO:0034165,GO:0034284,GO:0034341,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034728,GO:0034774,GO:0035218,GO:0035282,GO:0035295,GO:0035326,GO:0035710,GO:0035711,GO:0035767,GO:0035868,GO:0036230,GO:0036336,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0040025,GO:0042056,GO:0042088,GO:0042093,GO:0042100,GO:0042102,GO:0042104,GO:0042110,GO:0042113,GO:0042116,GO:0042119,GO:0042127,GO:0042129,GO:0042221,GO:0042277,GO:0042325,GO:0042327,GO:0042330,GO:0042393,GO:0042493,GO:0042575,GO:0042592,GO:0042742,GO:0042766,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043277,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043367,GO:0043370,GO:0043371,GO:0043388,GO:0043408,GO:0043410,GO:0043434,GO:0043467,GO:0043470,GO:0043471,GO:0043535,GO:0043536,GO:0043537,GO:0043542,GO:0043549,GO:0043565,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044378,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045063,GO:0045087,GO:0045088,GO:0045089,GO:0045121,GO:0045137,GO:0045165,GO:0045184,GO:0045185,GO:0045321,GO:0045322,GO:0045577,GO:0045578,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045597,GO:0045619,GO:0045620,GO:0045637,GO:0045638,GO:0045639,GO:0045646,GO:0045648,GO:0045652,GO:0045654,GO:0045661,GO:0045663,GO:0045664,GO:0045666,GO:0045739,GO:0045765,GO:0045766,GO:0045785,GO:0045787,GO:0045806,GO:0045819,GO:0045859,GO:0045860,GO:0045862,GO:0045892,GO:0045893,GO:0045898,GO:0045913,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046546,GO:0046631,GO:0046632,GO:0046634,GO:0046636,GO:0046637,GO:0046639,GO:0046649,GO:0046651,GO:0046661,GO:0046700,GO:0046822,GO:0046823,GO:0046825,GO:0046826,GO:0046903,GO:0046982,GO:0046983,GO:0048018,GO:0048232,GO:0048468,GO:0048471,GO:0048511,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0048878,GO:0050663,GO:0050670,GO:0050671,GO:0050673,GO:0050678,GO:0050679,GO:0050704,GO:0050706,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050716,GO:0050718,GO:0050727,GO:0050764,GO:0050765,GO:0050767,GO:0050769,GO:0050776,GO:0050777,GO:0050778,GO:0050786,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050829,GO:0050830,GO:0050831,GO:0050839,GO:0050863,GO:0050864,GO:0050865,GO:0050866,GO:0050867,GO:0050868,GO:0050869,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0050930,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051105,GO:0051106,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051271,GO:0051272,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051384,GO:0051450,GO:0051457,GO:0051480,GO:0051641,GO:0051651,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051861,GO:0051960,GO:0051962,GO:0052547,GO:0052548,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060249,GO:0060255,GO:0060260,GO:0060284,GO:0060326,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060627,GO:0060633,GO:0061041,GO:0061458,GO:0061695,GO:0062012,GO:0062013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070182,GO:0070201,GO:0070302,GO:0070304,GO:0070372,GO:0070374,GO:0070491,GO:0070555,GO:0070603,GO:0070661,GO:0070663,GO:0070665,GO:0070727,GO:0070873,GO:0070875,GO:0070887,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071396,GO:0071637,GO:0071639,GO:0071640,GO:0071642,GO:0071675,GO:0071677,GO:0071702,GO:0071704,GO:0071705,GO:0071706,GO:0071824,GO:0071840,GO:0071897,GO:0071944,GO:0072091,GO:0072341,GO:0072503,GO:0072507,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090025,GO:0090026,GO:0090087,GO:0090130,GO:0090132,GO:0090303,GO:0090304,GO:0090305,GO:0090317,GO:0097100,GO:0097159,GO:0097194,GO:0097350,GO:0097367,GO:0097458,GO:0097708,GO:0098542,GO:0098589,GO:0098657,GO:0098771,GO:0098772,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0099503,GO:0101002,GO:0120025,GO:0120035,GO:0120036,GO:0140097,GO:0140110,GO:0198738,GO:1901222,GO:1901224,GO:1901342,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901652,GO:1901681,GO:1901698,GO:1901700,GO:1901701,GO:1902041,GO:1902042,GO:1902044,GO:1902105,GO:1902106,GO:1902107,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902739,GO:1902741,GO:1903034,GO:1903036,GO:1903037,GO:1903038,GO:1903039,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903532,GO:1903555,GO:1903557,GO:1903670,GO:1903672,GO:1903706,GO:1903707,GO:1903708,GO:1903827,GO:1903828,GO:1904018,GO:1904813,GO:1904949,GO:1904950,GO:1904951,GO:1905114,GO:1905562,GO:1905564,GO:1990234,GO:1990774,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000142,GO:2000143,GO:2000145,GO:2000146,GO:2000147,GO:2000425,GO:2000426,GO:2000514,GO:2000515,GO:2000778,GO:2000819,GO:2001020,GO:2001022,GO:2001056,GO:2001141,GO:2001198,GO:2001200,GO:2001233,GO:2001234,GO:2001236,GO:2001237
Preferred name	HMGB2
Description	protein heterodimerization activity
COG category	K
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5208@1\|root,COG5648@1\|root,KOG0381@2759\|Eukaryota,KOG1657@2759\|Eukaryota
Evalue	3.68e-21
Seed ortholog	112098.XP_008611757.1
Hectar predicted targeting category	other localisation
Ec32 ortholog description	DPB3 class protein with histone-like transcription factor (NF-YC subunit) and high mobility group domains
Ec32 ortholog	Ec-03_001170.1
TranscriptId	348147
Track	FilteredModels1
ProteinId	347825

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347825	gene_2986	Tribonema minus UTEX_B_3156	gene	Contig_16 610594..616844 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347825	Trimin1\|347825\|estExt_Genemark1.C_Ctg_160076	Tribonema minus UTEX_B_3156	polypeptide	Contig_16 610594..616831 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2986_1	exon_2986_1	Tribonema minus UTEX_B_3156	exon	Contig_16 610594..611070 +
exon_2986_2	exon_2986_2	Tribonema minus UTEX_B_3156	exon	Contig_16 611592..611681 +
exon_2986_3	exon_2986_3	Tribonema minus UTEX_B_3156	exon	Contig_16 611990..612081 +
exon_2986_4	exon_2986_4	Tribonema minus UTEX_B_3156	exon	Contig_16 613960..614095 +
exon_2986_5	exon_2986_5	Tribonema minus UTEX_B_3156	exon	Contig_16 615405..615565 +
exon_2986_6	exon_2986_6	Tribonema minus UTEX_B_3156	exon	Contig_16 616735..616844 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2986	CDS_2986	Tribonema minus UTEX_B_3156	CDS	Contig_16 610594..611070 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2986	UTR3_2986	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_16 616832..616844 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_16:610594..616844+
coding sequence from alignment at Contig_16:610594..616844+

spliced messenger RNA

>mRNA_2986 ID=mRNA_2986|Name=jgi.p|Trimin1|347825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1066bp|location=Sequence derived from alignment at Contig_16:610594..616844+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGGACGACCTGGAGGCATTGGAAGATAGCCAACAGCACAGCCAGCT
CAGCAGTGGCACAAAGCGCAAGCTTGACGACTACCAGTCAGTGAATGCTG
AGACACCAGCCGATGAGCACGAGGAAACTGGCCAGGAGGAGAACGAGCAA
CAAGAGGACACCCAAGAGCAGCAGCAGACAAATGGAAGCCATGCTGATGA
CGACGGGGATGACCGTGAAGATGAGGCGGCACCAGCATCAGACGCAGAAG
GCGAAGAAGAGGAGGCTGATGCAGACGGTGGCGATCCACACGAAACTGGA
GATGATCCTGCCGCAGACGCCGACGAGGAGGCTGAGGCAGGCACGGATGG
AGAAGCAGGGGATGGAGAGGCAGAGGCAGAGGCAGAGGAAGACAGCGCGG
CTGCCTCCGAGCCCGCCAAGAAAATCAAGCGGGCGCAGAGCGCCTGGATG
TTCTTCCTGGCCGACAAACGTGACGAGGTGGTGAAAGCCAATCCAGGAGC
ACGCATTGGCGCTGTTGTGAAGGAGTGCTCGGGAATATGGGCTGCAATGC
CGCCAGAAGAGAAGCAGGTGTATGAAGCCCAGGCAGCGGAGGACAAGGCG
CGCTTGCAGAGGGAGCTGCAGGCAGCAGGGCTCACCAAGCTGCCATCTGC
AGGCAACAGGTCCGGCGAGGAACGGGATCTGCCGCCCGACGCGACAACGA
CCATACTTCTGCCGCTGTCGCGCGTGCGCAAGACGGCCAAGATGGACGCC
GAGGTGAAGAGCATCAACGCCGACGGCCTCGCGACGATTGCCAAGGCGAC
GGAGCTCTTCATAGCAACGCTCGCCAAGCGGTCGTGGGGCGCTGCGCGGC
AGTCGGGGCGGCGCAACCTGCGCGTGACCGACATAGCGCAGTGCGTCGAC
GCCGATGGCGCCCTGTATTTCCTGCGCGAAGAGCTCGCCACGATGGCAGC
AGCCAGTTCACGCAAAGCAGCGGCGGCGCCGCCAGCCAAGAAAGCTGCGC
TGGCTGCAGGCCCGGGCTCGAAATCCATCACGAGCTTTTTCGCAAGGACG
TGAGGAGCATCTGCAT

protein sequence of jgi.p|Trimin1|347825

>Trimin1|347825|estExt_Genemark1.C_Ctg_160076 ID=Trimin1|347825|estExt_Genemark1.C_Ctg_160076|Name=jgi.p|Trimin1|347825|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=351bp
MLDDLEALEDSQQHSQLSSGTKRKLDDYQSVNAETPADEHEETGQEENEQ
QEDTQEQQQTNGSHADDDGDDREDEAAPASDAEGEEEEADADGGDPHETG
DDPAADADEEAEAGTDGEAGDGEAEAEAEEDSAAASEPAKKIKRAQSAWM
FFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKA
RLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDA
EVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVD
ADGALYFLREELATMAAASSRKAAAAPPAKKAALAAGPGSKSITSFFART
*

mRNA from alignment at Contig_16:610594..616844+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2986 ID=mRNA_2986|Name=jgi.p|Trimin1|347825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6251bp|location=Sequence derived from alignment at Contig_16:610594..616844+ (Tribonema minus UTEX_B_3156 )
ATGTTGGACGACCTGGAGGCATTGGAAGATAGCCAACAGCACAGCCAGCT
CAGCAGTGGCACAAAGCGCAAGCTTGACGACTACCAGTCAGTGAATGCTG
AGACACCAGCCGATGAGCACGAGGAAACTGGCCAGGAGGAGAACGAGCAA
CAAGAGGACACCCAAGAGCAGCAGCAGACAAATGGAAGCCATGCTGATGA
CGACGGGGATGACCGTGAAGATGAGGCGGCACCAGCATCAGACGCAGAAG
GCGAAGAAGAGGAGGCTGATGCAGACGGTGGCGATCCACACGAAACTGGA
GATGATCCTGCCGCAGACGCCGACGAGGAGGCTGAGGCAGGCACGGATGG
AGAAGCAGGGGATGGAGAGGCAGAGGCAGAGGCAGAGGAAGACAGCGCGG
CTGCCTCCGAGCCCGCCAAGAAAATCAAGCGGGCGCAGAGCGCCTGGATG
TTCTTCCTGGCCGACAAACGTGACGAGGTGATGAGCCTGCGTGGACTTGC
TTTGGAACTTGCTGGTGTTGTTGCATCTTCTACACGACGGGCCAACAAAT
TGTTGAGCAATGCTTGCCCAAGTGCCTCACTACTCAATTCAGCTCAACTC
CTGTGATGCTAACGCAGCTGCTTATGTCTGCAACGGTGTTTCAGGCTCAT
GGAAAGCGTGGACAGTGCTTCTGTCATAGTGCGTGTGTGTTTGCCCCCTT
TGTCAATGCAAAGCACAAGCCCTCTTTGCCTGAGCACGACGCACCTACTC
GTGCGGTAACGATGCAGGCACGACTATGGCCTCTTGCTCTAGCATCGCGT
CTGCACAGTGCCTGACTACAGCATCATTGCTCAGTAAGGACCGTGCAGCC
ATGAAGCCACAGCACTATCAACAACCTGGAAGCCGCAGGCGTCATGTGAT
TCAATATGGTTCTGTCGTTGGCTTTTGCGAGCCATACTATGCAGCAACGG
CATTCACAGGGTGCTCTAATTGGTGTTGGGGCTTAACTGTATGCACAGGT
GGTGAAAGCCAATCCAGGAGCACGCATTGGCGCTGTTGTGAAGGAGTGCT
CGGGAATATGGGCTGCAATGCCGCCAGAAGAGAAGCAGGTAAGGCGCACC
CCGCTTTACAAGTCAGGTGCCATGTACGAAGAATCGCTGCACGCTATCCA
CCTCATGTGGATCCGCATTCACATACATCAATAGCTATGACCGCATAGTA
GCGGCACATACGCTTGCTGAAATGAGAGCTGGTTTTGGTTGAAGTTGTTA
GGCAGTTGGTCATCACGTCACCACATGATACATGGCCTTGGATTACGGGC
ATGGCACTTTGGAAGCGTGCACAACACCACAACTGCCCCTGGTAGAGACC
TTGGACCTCACATGCCATTGCAATGCTATCAATGCCGTCGTCGCAGGTGT
ATGAAGCCCAGGCAGCGGAGGACAAGGCGCGCTTGCAGAGGGAGCTGCAG
GCAGCAGGGCTCACCAAGCTGCCATCTGCAGGCAACAGGTGCGCGTCGCA
TGCTCCAGCGCGCAGCATGATGATGCAGCGCCATGGACCATGGCACAATT
TTTTAGGACTTGTTCTCACTGTTGAGTCGTCGGATAACTGGCCTTCTCAA
CTCCAAATACCTGGTGCCAGAAGCTGAAGTGGGCTGGTTGCCAGGCTGTA
ACCTTACCGTCCGTAAGCCAACTCTCGGTTGCATAGTGTTATAAACGTTC
GTGTACATTCCCTCCGTCACTCGTAGCAGTGGAGGTGTCTCAGGCACTGC
AGGGAAAGTGGCCGCCAGTGCGTCGCGGTTGAAGTTGAATCTGCATGCCG
CTGTGCTATTGTCGCTGTTGACGCCAGCTAGTCGCGCTGGGCGCGGGGCG
TCGCACGGATCACGCGCCCGGCAATAATGGGTGAAGCTGGTAGTAGCCCG
GAGATAATGGGCGAAACGAAGCTGGTGGTAGGTACCCAGCGTGTTCTAAC
GTATGCATGCCGGCTGGCAGTACGGCGTAGCATCGCAATGTGGCGGCGCG
CGCAGCCTTCAGCAGCACGCCAAAGCGGACGCTGGGACACGAACGGCTTT
TCGTGCCCTGCGTGAGCAGCACGTCACCAGTGCTCAGCTCTCGCGCGCCT
GCGGGGCCGCACGCGTCGCCGGCGCGGCGCTGACGATCCGCCGCAGCCGT
TGCGCGATGCGCACGAGTAGTGCAGGTGACGCTGCATCAGTGCTCAGTGT
GCAGGGGGGGCTAGTGCCGTGGCGTGACATATCAGCGTTCGCCGCTGGTG
CTCAATGCGGTACCTCGCGTACGGTGCTGCGTGCCGGTGCTGCGTGCGGA
CTGCTTGTGGGGGTCTCGACGGAGCTTGTCGAGCAGAGTCAGATGAGAGC
CGGAGCGCTTGCTGCGTTATGTACATAGTGCCGCAGCGTAAACGCAGCGG
TGCGCAGCGACGGCGCTGAGGCAGAGGCGTAGAGCGTGTACACGCCCAAA
TCGTAACTGCCATCATGCAGCGAGTCACAATGCTTCTGGACCGTAGCATT
ACTCATCAAAGAGCGGTGGCAGATTCTCGAGGACGTCAAGCATGGGGGGC
AGGCGCAGTAGTAGTAGTAGGACGCCGCATCATGCTTGATTCAGATGAAC
AAGTGCATATTTTGCTCTTGGTATATTGGTGATGTATGTACAGTACGCGC
AAGCAGCTGACAATAGGGATGGTGACGATCTTTAGTGGCAGTTACAACCT
TGACGTCCACACTCGCACATGGGAGTGGGCTGCGGGTGCACCATTGCTCT
GAGCGCTGCTGCAAGTCTGCAGCAGCGCGTCCGACGCCGGTCAGGGCCAT
CGATCGCAGGTCTTGGTCCCCGCAGCACTTCATCAGTTATTCACCTGCGA
CTGCACCAGGGCTAACGTTTGAAACTGGACCCCTTGCGCCAAAGAGGTTC
CGCCAGTTAGACTCGTGGCGCAACTGGCAATACTCGCAAGTTTACTCACG
GGTATCACTCGTTACTTGCGAGTCTTGCCTAGGGTTACTGTCTTACCTAA
GGTTAGTATTGGCCGTAATTTAACCGTAGCCATTATGTAAGCTGAATTGG
CCTTAATAGTGACTATAGAAGGACTAGAAGCCTTAATAAGAGTTGCGCCA
GTGGCGCCATGGCTAAACCAGTTCAGTCTGGCTCAATACCCAAACTGAGT
TTTGCCAAGGCCGGCCGAGTTTAGGCGCTAGCCCTGGACTGCACCCACGA
GCCAAAGAGCGAGCCCTGCGTGGATGTGAAGTCGCAGCAGTGCCCTCGTG
GGCCTGCCACGAATGCGAGCGCTGTTTGGTGCTATTGTGACTCGCTGTTG
CTGTGCTCACGAGCCCATCCGCCGCTGATGATGCTCGCTGCTGGTGTGCG
CATGCGCTGCTGTCAGGTCCGGCGAGGAACGGGATCTGCCGCCCGACGCG
ACAACGACCATACTTCTGCCGCTGTCGCGCGTGCGCAAGACGGCCAAGAT
GGACGCCGAGGTGAAGAGCATCAACGCCGACGGCCTCGCGACGATTGCCA
AGGTGAGCAGCTCTGCGTCATCATGGCTCTACGATAGGGCGCACTGTCTT
TGACAACTTCAAACCGTGGGTTGAGTATAGACTCTACATTATTGAGTGCA
CTAATGCTGACAACTGCTTTGCAGTACTTGATGTTTAAGTCAGCAGGGCT
CAGTGCGCAGCTGCGTGTGCTCAGGTCGTGATTCATGGGGTTGGTCATCT
ACAACACTGTTCCTCCTGCGCATGGTGCAATGGACAGGCGACTGAGCCGT
CCACTTGGACAATGCTTCTTGCCTGCAGTCAATCACACCACTCGATCTCA
ACACTCCTGTCAGCAAAGTGGCAAACACGACGATTTGAAATGTGAGCGTG
CTATTTACACAAGGCTGCACATTAATCTCAAACACTGGTCAGTGGCATGC
GCCGAGACTCATGTTCCAATACAGTGCCATGGCAATCGCGTCATCTCAGT
GGAGGCGAATGGCCGTGTTACTCAAGCCTGTCCTGGCGCTTTTGATTGGT
CACACAAACTGCCATAGAGCTGGTGAGGGAGTCCAGTGCTGTGCCTGCAA
CGCCTGCTCTCTTGGCACGCAATTTAGCCACCGAAGGCTTCCAATGCCAT
ACCAGCATCTGCCACTCAACGCAGAGCACAGTCATGAACGCTCGCTATGT
AAAAGTATTCAATGTGTATGCCCACGTGATATTTTGTCTTGTATGCTGCA
GCTCTCGTCGCCGTCATGTGCATGTTTAGCGCGGAGGAAACGCACGAGGC
TTATCACTATGGAAGTTACCGTTGCGCTGTCTCTCTCATCATTGCCATGA
GATGACATGACTTCTTCAAGCAGAACTGGTCACGGTTGCCATAAATGACA
TGACAGCAACAGGAGCATACAGCCAAGATCCCCGTGCTGCCCGAAAACAC
AAAGTGTGCATTTACCAACAAATACGCATTGTTGTGGCGGCTACAAAACC
GCTGTAACTGATGCTGCCTATGACTTCAAATAAACTTCCAGGAAGGCACC
GTGTGGCTCTGCGTGCAGCGTGGCAGCTCCTCCTTGGCCAGCATTGAAGG
GCAGCAGCTCACACTTCTTAACCGTCACCATCATGTGCACACTTGAAGCG
AAGTACTGCTTTGGAAGTGCTCCCTATGAGGGCCATGCCTCAGCAAAATG
CGCCTCTTCGCCGCCACCTTCTCCAGCCACTGGCGGCTGCCTGCGCGACG
GAATGGTGCCGCCACACGCCTACAAGCGTGCTTCATCTCGAAGCCGCATT
CGTACACTGCGTCACTGTCTCACTCTCTCGCGCCCGTCGCCACGCATAAC
TCTCTGCGCAGGCGACGGAGCTCTTCATAGCAACGCTCGCCAAGCGGTCG
TGGGGCGCTGCGCGGCAGTCGGGGCGGCGCAACCTGCGCGTGACCGACAT
AGCGCAGTGCGTCGACGCCGATGGCGCCCTGTATTTCCTGCGCGAAGAGC
TCGCCACGATGGCAGCAGCCAGGTCAGTGATGATCTGACTATCTGTGAAG
TATAGCGGCATGGGTTGAGCAGCAGTATGTGTTGTGAGCTGCGTGCGCCA
GTCCTGACAGTGCAGACACAGACACGAGCGGCGCAAAGGCGGCACGAGTT
GAAAACAGAAAGAGTTATTCGTTTCATGGCAAAACGTGATCAGTGCCTGC
TCTCTTATGGATGATAACAGTGATCCGTCTCATGGCAAAATGTGATCAGT
GCTTGGCCTCTTCCAAATAGCGTCTGGCAATGTGCTACTTCCATGCCCAT
GGCGGCACATTTGATCCAGGCACTTTCTCACATTGAACGGCGCTGTATGG
CAGCATTGTAGATGTTTGCATGCGTGTCAACGTACTACTTCGAAGTACAT
AAGTTGTAGTATTGGGTGATTGTAGCACCGCTTTGTGGACCCAACAAGAT
GTTGAAGTTAACGTAATATTGAACATGCTCCGGCCAACTACTTGAACAGC
ATGGCAGGCTTTTTGCCACTACTGTTGACAGGTCGGGGTAAGTGCGCTTC
TTATAAAGCCCATTGAATCGTCGCGCAGCATGAGTCATTTGGTGGTGCTG
GTAACCTGTTGCGCGTAGCATAAAGTCACCTAGAGCTCTACGATCTTTTG
ATTCGTGTTCATAGAGTCACAGAAACACATGTCACCGCTTGTAGCGAGGG
CAGCAGAATGCTTGCGAAGCCTCGCATGAAGGGCTGTGAAGTGGTTTATC
TGCAGCTAGGGCCAGACAGCGTTTTTGTCTGCAGGAGTGTGACCACTGCA
CGTGCATGGTCCACAGCCGCACAACGCTCACCTCAAACATTGTCATGGTG
CATTCATTGATGTGCATGCTCTTTCGTCTCAAAAGGCAAAGGCGTCACTC
ACTTCCACGCCAGCTTACTGTTTCCATCATGTCTTCGTACAGAAAGGCAT
ATACTTCAAACTATAGGACGTACCCTTATTCATGCTGCACATGGTCTGCA
TTTTCTGCATGAGCAGCGGCAACATGAACAGTATGCATACCATCTGTCAG
AATACTCTACATAGCTCACAGGAAAAACAGCAGCATGCACCATCTGTTAT
GCACCGCACAACATAGGTCACTATTGTGCCGCACGTCAATTATTGCTCAT
CCAGCCACGTGCTTCTGTGTGTGTGTTATGTATGCTCCCAGTTCACGCAA
AGCAGCGGCGGCGCCGCCAGCCAAGAAAGCTGCGCTGGCTGCAGGCCCGG
GCTCGAAATCCATCACGAGCTTTTTCGCAAGGACGTGAGGAGCATCTGCA
T

Coding sequence (CDS) from alignment at Contig_16:610594..616844+

>mRNA_2986 ID=mRNA_2986|Name=jgi.p|Trimin1|347825|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1053bp|location=Sequence derived from alignment at Contig_16:610594..616844+ (Tribonema minus UTEX_B_3156 )
ATGTTGGACGACCTGGAGGCATTGGAAGATAGCCAACAGCACAGCCAGCT
CAGCAGTGGCACAAAGCGCAAGCTTGACGACTACCAGTCAGTGAATGCTG
AGACACCAGCCGATGAGCACGAGGAAACTGGCCAGGAGGAGAACGAGCAA
CAAGAGGACACCCAAGAGCAGCAGCAGACAAATGGAAGCCATGCTGATGA
CGACGGGGATGACCGTGAAGATGAGGCGGCACCAGCATCAGACGCAGAAG
GCGAAGAAGAGGAGGCTGATGCAGACGGTGGCGATCCACACGAAACTGGA
GATGATCCTGCCGCAGACGCCGACGAGGAGGCTGAGGCAGGCACGGATGG
AGAAGCAGGGGATGGAGAGGCAGAGGCAGAGGCAGAGGAAGACAGCGCGG
CTGCCTCCGAGCCCGCCAAGAAAATCAAGCGGGCGCAGAGCGCCTGGATG
TTCTTCCTGGCCGACAAACGTGACGAGGTGGTGAAAGCCAATCCAGGAGC
ACGCATTGGCGCTGTTGTGAAGGAGTGCTCGGGAATATGGGCTGCAATGC
CGCCAGAAGAGAAGCAGGTGTATGAAGCCCAGGCAGCGGAGGACAAGGCG
CGCTTGCAGAGGGAGCTGCAGGCAGCAGGGCTCACCAAGCTGCCATCTGC
AGGCAACAGGTCCGGCGAGGAACGGGATCTGCCGCCCGACGCGACAACGA
CCATACTTCTGCCGCTGTCGCGCGTGCGCAAGACGGCCAAGATGGACGCC
GAGGTGAAGAGCATCAACGCCGACGGCCTCGCGACGATTGCCAAGGCGAC
GGAGCTCTTCATAGCAACGCTCGCCAAGCGGTCGTGGGGCGCTGCGCGGC
AGTCGGGGCGGCGCAACCTGCGCGTGACCGACATAGCGCAGTGCGTCGAC
GCCGATGGCGCCCTGTATTTCCTGCGCGAAGAGCTCGCCACGATGGCAGC
AGCCAGTTCACGCAAAGCAGCGGCGGCGCCGCCAGCCAAGAAAGCTGCGC
TGGCTGCAGGCCCGGGCTCGAAATCCATCACGAGCTTTTTCGCAAGGACG
TGA